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Conserved domains on  [gi|961525476|ref|NP_001304830|]
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protein FAM72A isoform 2 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FAM72 super family cl20856
FAM72 protein; This family of proteins is found in eukaryotes. Proteins in this family are ...
 49-149 9.96e-63

FAM72 protein; This family of proteins is found in eukaryotes. Proteins in this family are typically between 145 and 264 amino acids in length. The function of this family is unknown.


The actual alignment was detected with superfamily member pfam14976:

Pssm-ID: 405641  Cd Length: 145  Bit Score: 189.21  E-value: 9.96e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 961525476   49 PENAVDFTGRCYFTKICKCKLKDIACLKCGNIVGYHVIVPCSSCLLSCNNGHFWMFHSQAVYDINRLDSTGVNVLLWGNL 128
Cdd:pfam14976  45 PENTVDFVGSCYSTESCKCKLKDIACLKCGNIVGYHVVAPCKSCLLSCNNGHFWMFHSQAVSAINRLDSSGVNLLLWGNL 124

                          90       100
                  ....*....|....*....|.
gi 961525476  129 PEIEESTDEDVLNISAEECIR 149
Cdd:pfam14976 125 PETEDSEDEDMLSFSEEEYIR 145
 
Name Accession Description Interval E-value
FAM72 pfam14976
FAM72 protein; This family of proteins is found in eukaryotes. Proteins in this family are ...
 49-149 9.96e-63

FAM72 protein; This family of proteins is found in eukaryotes. Proteins in this family are typically between 145 and 264 amino acids in length. The function of this family is unknown.


Pssm-ID: 405641  Cd Length: 145  Bit Score: 189.21  E-value: 9.96e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 961525476   49 PENAVDFTGRCYFTKICKCKLKDIACLKCGNIVGYHVIVPCSSCLLSCNNGHFWMFHSQAVYDINRLDSTGVNVLLWGNL 128
Cdd:pfam14976  45 PENTVDFVGSCYSTESCKCKLKDIACLKCGNIVGYHVVAPCKSCLLSCNNGHFWMFHSQAVSAINRLDSSGVNLLLWGNL 124

                          90       100
                  ....*....|....*....|.
gi 961525476  129 PEIEESTDEDVLNISAEECIR 149
Cdd:pfam14976 125 PETEDSEDEDMLSFSEEEYIR 145
 
Name Accession Description Interval E-value
FAM72 pfam14976
FAM72 protein; This family of proteins is found in eukaryotes. Proteins in this family are ...
 49-149 9.96e-63

FAM72 protein; This family of proteins is found in eukaryotes. Proteins in this family are typically between 145 and 264 amino acids in length. The function of this family is unknown.


Pssm-ID: 405641  Cd Length: 145  Bit Score: 189.21  E-value: 9.96e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 961525476   49 PENAVDFTGRCYFTKICKCKLKDIACLKCGNIVGYHVIVPCSSCLLSCNNGHFWMFHSQAVYDINRLDSTGVNVLLWGNL 128
Cdd:pfam14976  45 PENTVDFVGSCYSTESCKCKLKDIACLKCGNIVGYHVVAPCKSCLLSCNNGHFWMFHSQAVSAINRLDSSGVNLLLWGNL 124

                          90       100
                  ....*....|....*....|.
gi 961525476  129 PEIEESTDEDVLNISAEECIR 149
Cdd:pfam14976 125 PETEDSEDEDMLSFSEEEYIR 145
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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