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ribosomal protein uL24-like [Homo sapiens]
uL24 family ribosomal protein( domain architecture ID 11246010)
uL24 family ribosomal protein is required for the assembly of different ribosomal subunits and are widely distributed among all living organisms.
List of domain hits
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Name | Accession | Description | Interval | E-value | |||
Ribosomal_L26 | pfam16906 | Ribosomal proteins L26 eukaryotic, L24P archaeal; Ribosomal_L26 is a family of the 50S and the ... |
8-122 | 8.27e-70 | |||
Ribosomal proteins L26 eukaryotic, L24P archaeal; Ribosomal_L26 is a family of the 50S and the 60S ribosomal proteins from eukaryotes - L26 - and archaea - L25. : Pssm-ID: 465307 [Multi-domain] Cd Length: 114 Bit Score: 205.43 E-value: 8.27e-70
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PRK05431 super family | cl35319 | seryl-tRNA synthetase; Provisional |
109-145 | 5.66e-03 | |||
seryl-tRNA synthetase; Provisional The actual alignment was detected with superfamily member PRK05431: Pssm-ID: 235461 [Multi-domain] Cd Length: 425 Bit Score: 35.81 E-value: 5.66e-03
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Name | Accession | Description | Interval | E-value | |||
Ribosomal_L26 | pfam16906 | Ribosomal proteins L26 eukaryotic, L24P archaeal; Ribosomal_L26 is a family of the 50S and the ... |
8-122 | 8.27e-70 | |||
Ribosomal proteins L26 eukaryotic, L24P archaeal; Ribosomal_L26 is a family of the 50S and the 60S ribosomal proteins from eukaryotes - L26 - and archaea - L25. Pssm-ID: 465307 [Multi-domain] Cd Length: 114 Bit Score: 205.43 E-value: 8.27e-70
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PTZ00194 | PTZ00194 | 60S ribosomal protein L26; Provisional |
3-137 | 1.71e-60 | |||
60S ribosomal protein L26; Provisional Pssm-ID: 185508 Cd Length: 143 Bit Score: 183.03 E-value: 1.71e-60
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rplX_A_E | TIGR01080 | ribosomal protein uL24, archaeal/eukaryotic form; This model represents the archaeal and ... |
8-121 | 5.73e-44 | |||
ribosomal protein uL24, archaeal/eukaryotic form; This model represents the archaeal and eukaryotic branch of the ribosomal protein L24p/L26e family. Bacterial and organellar forms are represented by related model TIGR01079. [Protein synthesis, Ribosomal proteins: synthesis and modification] Pssm-ID: 273432 Cd Length: 114 Bit Score: 140.37 E-value: 5.73e-44
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KOW_RPL26 | cd06089 | KOW motif of Ribosomal Protein L26; RPL26 and its bacterial paralogs RPL24 have a KOW motif at ... |
52-106 | 6.04e-13 | |||
KOW motif of Ribosomal Protein L26; RPL26 and its bacterial paralogs RPL24 have a KOW motif at their N terminal. KOW domain is known as an RNA-binding motif that is shared so far among some families of ribosomal proteins, the essential bacterial transcriptional elongation factor NusG, the eukaryotic chromatin elongation factor Spt5, the higher eukaryotic KIN17 proteins and Mtr4. RPL26 makes a very minor contributions to the biogenesis, structure, and function of 60s ribosomal subunits. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage. Pssm-ID: 240513 Cd Length: 65 Bit Score: 59.84 E-value: 6.04e-13
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PRK05431 | PRK05431 | seryl-tRNA synthetase; Provisional |
109-145 | 5.66e-03 | |||
seryl-tRNA synthetase; Provisional Pssm-ID: 235461 [Multi-domain] Cd Length: 425 Bit Score: 35.81 E-value: 5.66e-03
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RplX | COG0198 | Ribosomal protein L24 [Translation, ribosomal structure and biogenesis]; Ribosomal protein L24 ... |
47-85 | 9.63e-03 | |||
Ribosomal protein L24 [Translation, ribosomal structure and biogenesis]; Ribosomal protein L24 is part of the Pathway/BioSystem: Ribosome 50S subunit Pssm-ID: 439968 [Multi-domain] Cd Length: 104 Bit Score: 33.88 E-value: 9.63e-03
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Name | Accession | Description | Interval | E-value | |||
Ribosomal_L26 | pfam16906 | Ribosomal proteins L26 eukaryotic, L24P archaeal; Ribosomal_L26 is a family of the 50S and the ... |
8-122 | 8.27e-70 | |||
Ribosomal proteins L26 eukaryotic, L24P archaeal; Ribosomal_L26 is a family of the 50S and the 60S ribosomal proteins from eukaryotes - L26 - and archaea - L25. Pssm-ID: 465307 [Multi-domain] Cd Length: 114 Bit Score: 205.43 E-value: 8.27e-70
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PTZ00194 | PTZ00194 | 60S ribosomal protein L26; Provisional |
3-137 | 1.71e-60 | |||
60S ribosomal protein L26; Provisional Pssm-ID: 185508 Cd Length: 143 Bit Score: 183.03 E-value: 1.71e-60
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rplX_A_E | TIGR01080 | ribosomal protein uL24, archaeal/eukaryotic form; This model represents the archaeal and ... |
8-121 | 5.73e-44 | |||
ribosomal protein uL24, archaeal/eukaryotic form; This model represents the archaeal and eukaryotic branch of the ribosomal protein L24p/L26e family. Bacterial and organellar forms are represented by related model TIGR01079. [Protein synthesis, Ribosomal proteins: synthesis and modification] Pssm-ID: 273432 Cd Length: 114 Bit Score: 140.37 E-value: 5.73e-44
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KOW_RPL26 | cd06089 | KOW motif of Ribosomal Protein L26; RPL26 and its bacterial paralogs RPL24 have a KOW motif at ... |
52-106 | 6.04e-13 | |||
KOW motif of Ribosomal Protein L26; RPL26 and its bacterial paralogs RPL24 have a KOW motif at their N terminal. KOW domain is known as an RNA-binding motif that is shared so far among some families of ribosomal proteins, the essential bacterial transcriptional elongation factor NusG, the eukaryotic chromatin elongation factor Spt5, the higher eukaryotic KIN17 proteins and Mtr4. RPL26 makes a very minor contributions to the biogenesis, structure, and function of 60s ribosomal subunits. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage. Pssm-ID: 240513 Cd Length: 65 Bit Score: 59.84 E-value: 6.04e-13
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KOW | pfam00467 | KOW motif; This family has been extended to coincide with ref. The KOW (Kyprides, Ouzounis, ... |
51-83 | 2.57e-03 | |||
KOW motif; This family has been extended to coincide with ref. The KOW (Kyprides, Ouzounis, Woese) motif is found in a variety of ribosomal proteins and NusG. Pssm-ID: 425698 [Multi-domain] Cd Length: 32 Bit Score: 33.51 E-value: 2.57e-03
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PRK05431 | PRK05431 | seryl-tRNA synthetase; Provisional |
109-145 | 5.66e-03 | |||
seryl-tRNA synthetase; Provisional Pssm-ID: 235461 [Multi-domain] Cd Length: 425 Bit Score: 35.81 E-value: 5.66e-03
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RplX | COG0198 | Ribosomal protein L24 [Translation, ribosomal structure and biogenesis]; Ribosomal protein L24 ... |
47-85 | 9.63e-03 | |||
Ribosomal protein L24 [Translation, ribosomal structure and biogenesis]; Ribosomal protein L24 is part of the Pathway/BioSystem: Ribosome 50S subunit Pssm-ID: 439968 [Multi-domain] Cd Length: 104 Bit Score: 33.88 E-value: 9.63e-03
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Blast search parameters | ||||
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