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Conserved domains on  [gi|1012443617|ref|NP_001308697|]
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zinc finger protein 471 isoform 2 [Homo sapiens]

Protein Classification

C2H2-type zinc finger protein( domain architecture ID 11472214)

Cys2His2 (C2H2)-type zinc finger protein may be involved in transcriptional regulation

CATH:  3.30.160.60
Gene Ontology:  GO:0008270|GO:0003677
PubMed:  11361095|22803940
SCOP:  4003583

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
214-528 2.30e-14

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 75.50  E-value: 2.30e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 214 KPYKCKECRKAFRQPAHLAQHQRIHTGEKPYEC--KECGKAFSDGSSFARHQRCHTGKRPYECIECGKAFRYNTSFIRHW 291
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNSKSLPLSNSKASSSSLS 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 292 RSYHTGEKPFNCIDCGKAFSVHIGLILHRRIHTGEKPYKCGVCgktFSSGSSRTVHQRIHtgeKPYECDICGKDFSHHAS 371
Cdd:COG5048   112 SSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGN---NSSSVNTPQSNSLH---PPLPANSLSKDPSSNLS 185

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 372 LTQHQRVHSGEKPYECKECGKAFRQNVHLVSHLRIHTGEKPYECKECGKAFRISSQLATHQRIHTGEKPYECIECGNAFK 451
Cdd:COG5048   186 LLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSL 265

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 452 QRSHLAQHQKTHTGE-------KPYECNECGKAFSQTSNLTQHQR--IHTGE--KPYKCTE--CGKAFSDSSSCAQHQRL 518
Cdd:COG5048   266 PTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILL 345

                         330
                  ....*....|
gi 1012443617 519 HTGQRPYQCF 528
Cdd:COG5048   346 HTSISPAKEK 355
SFP1 super family cl25788
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 125-183 1.42e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


The actual alignment was detected with superfamily member COG5189:

Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 41.24  E-value: 1.42e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 125 VYVGKKLFKCN--ECDKTFTHSSSLTVHfRIH--------------------TGEKPYACEECGKAFKQRQHLaQHHRTH 182
Cdd:COG5189   343 KVKDGKPYKCPveGCNKKYKNQNGLKYH-MLHghqnqklhenpspekmnifsAKDKPYRCEVCDKRYKNLNGL-KYHRKH 420


                  .
gi 1012443617 183 T 183
Cdd:COG5189   421 S 421
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
214-528 2.30e-14

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 75.50  E-value: 2.30e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 214 KPYKCKECRKAFRQPAHLAQHQRIHTGEKPYEC--KECGKAFSDGSSFARHQRCHTGKRPYECIECGKAFRYNTSFIRHW 291
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNSKSLPLSNSKASSSSLS 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 292 RSYHTGEKPFNCIDCGKAFSVHIGLILHRRIHTGEKPYKCGVCgktFSSGSSRTVHQRIHtgeKPYECDICGKDFSHHAS 371
Cdd:COG5048   112 SSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGN---NSSSVNTPQSNSLH---PPLPANSLSKDPSSNLS 185

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 372 LTQHQRVHSGEKPYECKECGKAFRQNVHLVSHLRIHTGEKPYECKECGKAFRISSQLATHQRIHTGEKPYECIECGNAFK 451
Cdd:COG5048   186 LLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSL 265

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 452 QRSHLAQHQKTHTGE-------KPYECNECGKAFSQTSNLTQHQR--IHTGE--KPYKCTE--CGKAFSDSSSCAQHQRL 518
Cdd:COG5048   266 PTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILL 345

                         330
                  ....*....|
gi 1012443617 519 HTGQRPYQCF 528
Cdd:COG5048   346 HTSISPAKEK 355
zf-H2C2_2 pfam13465
Zinc-finger double domain;
483-507 4.41e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.74  E-value: 4.41e-04
                          10        20
                  ....*....|....*....|....*
gi 1012443617 483 NLTQHQRIHTGEKPYKCTECGKAFS 507
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 125-183 1.42e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 41.24  E-value: 1.42e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 125 VYVGKKLFKCN--ECDKTFTHSSSLTVHfRIH--------------------TGEKPYACEECGKAFKQRQHLaQHHRTH 182
Cdd:COG5189   343 KVKDGKPYKCPveGCNKKYKNQNGLKYH-MLHghqnqklhenpspekmnifsAKDKPYRCEVCDKRYKNLNGL-KYHRKH 420


                  .
gi 1012443617 183 T 183
Cdd:COG5189   421 S 421
zf-H2C2_2 pfam13465
Zinc-finger double domain;
146-171 1.96e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 1.96e-03
                          10        20
                  ....*....|....*....|....*.
gi 1012443617 146 SLTVHFRIHTGEKPYACEECGKAFKQ 171
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
214-528 2.30e-14

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 75.50  E-value: 2.30e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 214 KPYKCKECRKAFRQPAHLAQHQRIHTGEKPYEC--KECGKAFSDGSSFARHQRCHTGKRPYECIECGKAFRYNTSFIRHW 291
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNSKSLPLSNSKASSSSLS 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 292 RSYHTGEKPFNCIDCGKAFSVHIGLILHRRIHTGEKPYKCGVCgktFSSGSSRTVHQRIHtgeKPYECDICGKDFSHHAS 371
Cdd:COG5048   112 SSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGN---NSSSVNTPQSNSLH---PPLPANSLSKDPSSNLS 185

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 372 LTQHQRVHSGEKPYECKECGKAFRQNVHLVSHLRIHTGEKPYECKECGKAFRISSQLATHQRIHTGEKPYECIECGNAFK 451
Cdd:COG5048   186 LLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSL 265

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 452 QRSHLAQHQKTHTGE-------KPYECNECGKAFSQTSNLTQHQR--IHTGE--KPYKCTE--CGKAFSDSSSCAQHQRL 518
Cdd:COG5048   266 PTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILL 345

                         330
                  ....*....|
gi 1012443617 519 HTGQRPYQCF 528
Cdd:COG5048   346 HTSISPAKEK 355
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
186-552 9.55e-13

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 70.49  E-value: 9.55e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 186 KLFECKECRKAFKQSEHLIQHQRIHTGEKPYKC--KECRKAFRQPAHLAQHQRIHTGEKPYECKECG----------KAF 253
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNSKSLplsnskasssSLS 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 254 SDGSSFARHQRCHTgkrPYECIECGKAFRYNTSFIRHWRSYHTGEKPFNCIDCGKAFSVHIGLILHRRIHTGEKPYKCGV 333
Cdd:COG5048   112 SSSSNSNDNNLLSS---HSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQSNSLHPPLPANSLSKDPSSNLSLLI 188

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 334 CG---------KTFSSGSSRTV------HQRIHTGEKPYECDICGKDFSHHASLTQHQRVHSGEKPYECKECGKAFRQNV 398
Cdd:COG5048   189 SSnvstsipssSENSPLSSSYSipssssDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSLPTA 268

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 399 HLVSHLRIHTGE-------KPYECKECGKAFRISSQLATHQR--IHTGE--KPYEC--IECGNAFKQRSHLAQHQKTHTG 465
Cdd:COG5048   269 SSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTS 348

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 466 EKPYEC--NECGKAFSQ--TSNLTQHQRIHTGEKPYKCTEC----GKAFSDSSSCAQ-HQRLHTGQRPYQC--FECGKAF 534
Cdd:COG5048   349 ISPAKEklLNSSSKFSPllNNEPPQSLQQYKDLKNDKKSETlsnsCIRNFKRDSNLSlHIITHLSFRPYNCknPPCSKSF 428

                         410
                  ....*....|....*...
gi 1012443617 535 RRKLSLICHQRSHTGEEP 552
Cdd:COG5048   429 NRHYNLIPHKKIHTNHAP 446
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
129-536 1.40e-10

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 63.56  E-value: 1.40e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 129 KKLFKCNECDKTFTHSSSLTVHFRIHTGEKPYAC--EECGKAFKQRQHLAQHHRTHTGEKLFECKecrkafkqsehliqH 206
Cdd:COG5048    31 PRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNS--------------K 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 207 QRIHTGEKPYKCKE--CRKAFRQPAHLAQH---QRIHTGEKPYECKEC---GKAFSDGSSFARHQRCHTGKR-PYECIEC 277
Cdd:COG5048    97 SLPLSNSKASSSSLssSSSNSNDNNLLSSHslpPSSRDPQLPDLLSISnlrNNPLPGNNSSSVNTPQSNSLHpPLPANSL 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 278 GKAFRYNTSFIRHWRSYHTGEKPFNCIDCGKAFSVHIGLILHRRIHTgEKPYKC----GVCGKTFSSGSSRTVHQRIHTG 353
Cdd:COG5048   177 SKDPSSNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENS-SSSLPLttnsQLSPKSLLSQSPSSLSSSDSSS 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 354 EKPyECDICGKDFSHHASlTQHQRVHSGE-----KPYECKECGKAFRQNVHLVSHLR--IHTGE--KPYECKE--CGKAF 422
Cdd:COG5048   256 SAS-ESPRSSLPTASSQS-SSPNESDSSSekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLF 333

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 423 RISSQLATHQRIHTGEKPYECI--ECGNAFKQRSH-----LAQHQKTHTGEKPYEC--NECGKAFSQTSNLTQHQRIHTG 493
Cdd:COG5048   334 SRNDALKRHILLHTSISPAKEKllNSSSKFSPLLNneppqSLQQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLS 413

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*
gi 1012443617 494 EKP--YKCTECGKAFSDSSSCAQHQRLHTGQRPYQCFECGKAFRR 536
Cdd:COG5048   414 FRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRD 458
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
102-405 1.05e-05

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 48.15  E-value: 1.05e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 102 SIYNHTSDKKSFSKNSMVIKHKKVYVGKKLFKCNECDKTFTHSSSLTVHFRIHTGEKPYACEECGKAFKQRQHLAQHHRT 181
Cdd:COG5048   169 PPLPANSLSKDPSSNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSL 248

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 182 HTGEKLFECKECRKAFKQSEHLIQHQRIHTGE-------KPYKCKECRKAFRQPAHLAQHQR--IHTGE--KPYECKE-- 248
Cdd:COG5048   249 SSSDSSSSASESPRSSLPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYsl 328

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 249 CGKAFSDGSSFARHQRCHTGKRPYECIECGkafryntsfirhwrsyHTGEKPFNCIDCGKAFSVHIGLILHRRIHTGEKP 328
Cdd:COG5048   329 CGKLFSRNDALKRHILLHTSISPAKEKLLN----------------SSSKFSPLLNNEPPQSLQQYKDLKNDKKSETLSN 392

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1012443617 329 YKCgvcgKTFSSGSSRTVHQRIHTGEKPYECD--ICGKDFSHHASLTQHQRVHSGEKPYECkECGKAFRQNVHLVSHLR 405
Cdd:COG5048   393 SCI----RNFKRDSNLSLHIITHLSFRPYNCKnpPCSKSFNRHYNLIPHKKIHTNHAPLLC-SILKSFRRDLDLSNHGK 466
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 292-380 1.86e-04

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 43.94  E-value: 1.86e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 292 RSYHTGEKPFNC--IDCGKAFSVHIGLILHRrihtgekpyKCGVCGKTFSSGSSRTVHQRIHTGEKPYECDICGKDFSHH 369
Cdd:COG5189   341 MLKVKDGKPYKCpvEGCNKKYKNQNGLKYHM---------LHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNL 411

                          90
                  ....*....|.
gi 1012443617 370 ASLTQHqRVHS 380
Cdd:COG5189   412 NGLKYH-RKHS 421
zf-H2C2_2 pfam13465
Zinc-finger double domain;
483-507 4.41e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.74  E-value: 4.41e-04
                          10        20
                  ....*....|....*....|....*
gi 1012443617 483 NLTQHQRIHTGEKPYKCTECGKAFS 507
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
455-480 5.63e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 5.63e-04
                          10        20
                  ....*....|....*....|....*.
gi 1012443617 455 HLAQHQKTHTGEKPYECNECGKAFSQ 480
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
230-254 5.69e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 5.69e-04
                          10        20
                  ....*....|....*....|....*
gi 1012443617 230 HLAQHQRIHTGEKPYECKECGKAFS 254
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
202-227 8.10e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.97  E-value: 8.10e-04
                          10        20
                  ....*....|....*....|....*.
gi 1012443617 202 HLIQHQRIHTGEKPYKCKECRKAFRQ 227
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
399-422 9.66e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 9.66e-04
                          10        20
                  ....*....|....*....|....
gi 1012443617 399 HLVSHLRIHTGEKPYECKECGKAF 422
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSF 24
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 125-183 1.42e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 41.24  E-value: 1.42e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1012443617 125 VYVGKKLFKCN--ECDKTFTHSSSLTVHfRIH--------------------TGEKPYACEECGKAFKQRQHLaQHHRTH 182
Cdd:COG5189   343 KVKDGKPYKCPveGCNKKYKNQNGLKYH-MLHghqnqklhenpspekmnifsAKDKPYRCEVCDKRYKNLNGL-KYHRKH 420


                  .
gi 1012443617 183 T 183
Cdd:COG5189   421 S 421
zf-H2C2_2 pfam13465
Zinc-finger double domain;
146-171 1.96e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 1.96e-03
                          10        20
                  ....*....|....*....|....*.
gi 1012443617 146 SLTVHFRIHTGEKPYACEECGKAFKQ 171
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
428-452 3.36e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 3.36e-03
                          10        20
                  ....*....|....*....|....*
gi 1012443617 428 LATHQRIHTGEKPYECIECGNAFKQ 452
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
371-396 3.64e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 3.64e-03
                          10        20
                  ....*....|....*....|....*.
gi 1012443617 371 SLTQHQRVHSGEKPYECKECGKAFRQ 396
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
258-283 7.24e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.27  E-value: 7.24e-03
                          10        20
                  ....*....|....*....|....*.
gi 1012443617 258 SFARHQRCHTGKRPYECIECGKAFRY 283
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
347-368 7.99e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.27  E-value: 7.99e-03
                          10        20
                  ....*....|....*....|..
gi 1012443617 347 HQRIHTGEKPYECDICGKDFSH 368
Cdd:pfam13465   5 HMRTHTGEKPYKCPECGKSFKS 26
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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