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Conserved domains on  [gi|1047600406|ref|NP_001316687|]
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protein FAM136A isoform 4 [Homo sapiens]

Protein Classification

FAM136 family protein( domain architecture ID 10530719)

FAM136 family protein is a DUF842 domain-containing protein similar to Homo sapiens protein FAM136A

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF842 pfam05811
Eukaryotic protein of unknown function (DUF842); This family consists of a number of conserved ...
 1-96 5.16e-37

Eukaryotic protein of unknown function (DUF842); This family consists of a number of conserved eukaryotic proteins of unknown function. The sequences carry three sets of CxxxC motifs, which might suggest a type of zinc-finger formation.


:

Pssm-ID: 461747  Cd Length: 126  Bit Score: 121.24  E-value: 5.16e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1047600406   1 MFRCSASCCEDSQASMKQVHQCIERCHVPLAQAQALVTSELEKFQDRLARCTMHCNDKAKDSIDAGSKELQVK---QQLD 77
Cdd:pfam05811  28 MFKCAAKCCDDRDASQEEVQNCVERCSQPLTKAQNYVQNELEQFQERLQRCVMVCQDKAKDKFGPNPSEKDVAkaqKQLE 107

                          90
                  ....*....|....*....
gi 1047600406  78 SCVTKCVDDHMHLIPTMTK 96
Cdd:pfam05811 108 SCVVKCVDEHIKLLPKIVK 126
 
Name Accession Description Interval E-value
DUF842 pfam05811
Eukaryotic protein of unknown function (DUF842); This family consists of a number of conserved ...
 1-96 5.16e-37

Eukaryotic protein of unknown function (DUF842); This family consists of a number of conserved eukaryotic proteins of unknown function. The sequences carry three sets of CxxxC motifs, which might suggest a type of zinc-finger formation.


Pssm-ID: 461747  Cd Length: 126  Bit Score: 121.24  E-value: 5.16e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1047600406   1 MFRCSASCCEDSQASMKQVHQCIERCHVPLAQAQALVTSELEKFQDRLARCTMHCNDKAKDSIDAGSKELQVK---QQLD 77
Cdd:pfam05811  28 MFKCAAKCCDDRDASQEEVQNCVERCSQPLTKAQNYVQNELEQFQERLQRCVMVCQDKAKDKFGPNPSEKDVAkaqKQLE 107

                          90
                  ....*....|....*....
gi 1047600406  78 SCVTKCVDDHMHLIPTMTK 96
Cdd:pfam05811 108 SCVVKCVDEHIKLLPKIVK 126
 
Name Accession Description Interval E-value
DUF842 pfam05811
Eukaryotic protein of unknown function (DUF842); This family consists of a number of conserved ...
 1-96 5.16e-37

Eukaryotic protein of unknown function (DUF842); This family consists of a number of conserved eukaryotic proteins of unknown function. The sequences carry three sets of CxxxC motifs, which might suggest a type of zinc-finger formation.


Pssm-ID: 461747  Cd Length: 126  Bit Score: 121.24  E-value: 5.16e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1047600406   1 MFRCSASCCEDSQASMKQVHQCIERCHVPLAQAQALVTSELEKFQDRLARCTMHCNDKAKDSIDAGSKELQVK---QQLD 77
Cdd:pfam05811  28 MFKCAAKCCDDRDASQEEVQNCVERCSQPLTKAQNYVQNELEQFQERLQRCVMVCQDKAKDKFGPNPSEKDVAkaqKQLE 107

                          90
                  ....*....|....*....
gi 1047600406  78 SCVTKCVDDHMHLIPTMTK 96
Cdd:pfam05811 108 SCVVKCVDEHIKLLPKIVK 126
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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