|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
67-312 |
1.37e-27 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 115.42 E-value: 1.37e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 67 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNyissvdeDAFQGIRRLKELILSSNKITYLhNKTFHPVPNLRNLDLSYNKL 146
Cdd:COG4886 77 LSLLLLSLLLLGLTDLGDLTNLTELDLSGN-------EELSNLTNLESLDLSGNQLTDL-PEELANLTNLKELDLSNNQL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 147 QTLqSEQFKGLRKLIILHLRSNSLKTVPiRVFQDCRNLDFLDLGYNRLRSLSrnafagllklkelhlehnqfskinfAHF 226
Cdd:COG4886 149 TDL-PEPLGNLTNLKSLDLSNNQLTDLP-EELGNLTNLKELDLSNNQITDLP-------------------------EPL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 227 PRLFNLRSIYLQWNRIRSISQGLTwTWSSLHNLDLSGNDIQGIEpgTFKCLPNLQKLNLDSNKLTNISQETvnAWISLIS 306
Cdd:COG4886 202 GNLTNLEELDLSGNQLTDLPEPLA-NLTNLETLDLSNNQLTDLP--ELGNLTNLEELDLSNNQLTDLPPLA--NLTNLKT 276
|
....*.
gi 1060099280 307 ITLSGN 312
Cdd:COG4886 277 LDLSNN 282
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
44-312 |
5.20e-23 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 101.93 E-value: 5.20e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 44 KIVYCESHAFADIPENISGGS--QGLSLRFNSIQKLKSNqFAGLNQLIWLYLDHNYISSVDEdAFQGIRRLKELILSSNK 121
Cdd:COG4886 116 ESLDLSGNQLTDLPEELANLTnlKELDLSNNQLTDLPEP-LGNLTNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQ 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 122 ITYLHnKTFHPVPNLRNLDLSYNKLQTLqSEQFKGLRKLIILHLRSNSLKTVPirVFQDCRNLDFLDLGYNRLRSLSrnA 201
Cdd:COG4886 194 ITDLP-EPLGNLTNLEELDLSGNQLTDL-PEPLANLTNLETLDLSNNQLTDLP--ELGNLTNLEELDLSNNQLTDLP--P 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 202 FAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQ 281
Cdd:COG4886 268 LANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLL 347
|
250 260 270
....*....|....*....|....*....|.
gi 1060099280 282 KLNLDSNKLTNISQETVNAWISLISITLSGN 312
Cdd:COG4886 348 ALLTLLLLLNLLSLLLTLLLTLGLLGLLEAT 378
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
64-312 |
1.99e-19 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 90.76 E-value: 1.99e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 64 SQGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSY 143
Cdd:COG4886 26 LLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSG 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 144 NklqtlqsEQFKGLRKLIILHLRSNSLKTVPIRvFQDCRNLDFLDLGYNRLRSLSRNafagllklkelhlehnqfskinf 223
Cdd:COG4886 106 N-------EELSNLTNLESLDLSGNQLTDLPEE-LANLTNLKELDLSNNQLTDLPEP----------------------- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 224 ahFPRLFNLRSIYLQWNRIRSISQGLTwTWSSLHNLDLSGNDIQGIePGTFKCLPNLQKLNLDSNKLTNISQEtVNAWIS 303
Cdd:COG4886 155 --LGNLTNLKSLDLSNNQLTDLPEELG-NLTNLKELDLSNNQITDL-PEPLGNLTNLEELDLSGNQLTDLPEP-LANLTN 229
|
....*....
gi 1060099280 304 LISITLSGN 312
Cdd:COG4886 230 LETLDLSNN 238
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
91-312 |
8.99e-16 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 76.75 E-value: 8.99e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 91 LYLDHNYISSVDEDAFqgIRRLKELILSSNKITYLHNktFHPVPNLRNLDLSYNKLQTLqsEQFKGLRKLIILHLRSNSl 170
Cdd:cd21340 7 LYLNDKNITKIDNLSL--CKNLKVLYLYDNKITKIEN--LEFLTNLTHLYLQNNQIEKI--ENLENLVNLKKLYLGGNR- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 171 ktvpIRV---FQDCRNLDFLDLGYNRLRSlsrnafagllklkelhleHNQFskinfahfprLFNLRSIylqwnriRSISQ 247
Cdd:cd21340 80 ----ISVvegLENLTNLEELHIENQRLPP------------------GEKL----------TFDPRSL-------AALSN 120
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1060099280 248 gltwtwsSLHNLDLSGNDIQGIEPgtFKCLPNLQKLNLDSNKLTNISQ--ETVNAWISLISITLSGN 312
Cdd:cd21340 121 -------SLRVLNISGNNIDSLEP--LAPLRNLEQLDASNNQISDLEEllDLLSSWPSLRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
134-194 |
2.51e-15 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 70.63 E-value: 2.51e-15
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1060099280 134 PNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRL 194
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
44-266 |
4.13e-15 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 77.67 E-value: 4.13e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 44 KIVYCESHAFADIPENISGGS--QGLSLRFNSIQKLkSNQFAGLNQLIWLYLDHNYISSVDEDaFQGIRRLKELILSSNK 121
Cdd:COG4886 162 KSLDLSNNQLTDLPEELGNLTnlKELDLSNNQITDL-PEPLGNLTNLEELDLSGNQLTDLPEP-LANLTNLETLDLSNNQ 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 122 ITYLHNktFHPVPNLRNLDLSYNKLQTLQSEqfKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNA 201
Cdd:COG4886 240 LTDLPE--LGNLTNLEELDLSNNQLTDLPPL--ANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLI 315
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1060099280 202 FAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDI 266
Cdd:COG4886 316 LLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLL 380
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
87-146 |
5.02e-14 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 66.78 E-value: 5.02e-14
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 87 QLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKL 146
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
67-122 |
2.05e-12 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 62.16 E-value: 2.05e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1060099280 67 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKI 122
Cdd:pfam13855 6 LDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
110-170 |
4.18e-12 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 61.39 E-value: 4.18e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1060099280 110 RRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSL 170
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
231-290 |
6.98e-11 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 57.92 E-value: 6.98e-11
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 231 NLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKL 290
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
254-312 |
4.64e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 52.53 E-value: 4.64e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1060099280 254 SSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQetvNAWI---SLISITLSGN 312
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSP---GAFSglpSLRYLDLSGN 59
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
56-312 |
1.85e-08 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 57.55 E-value: 1.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 56 IPENISGGSQGLSLRF--NSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPV 133
Cdd:PLN00113 276 IPPSIFSLQKLISLDLsdNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKH 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 134 PNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDfldlgynRLRsLSRNAFAGLLKlkelhl 213
Cdd:PLN00113 356 NNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLR-------RVR-LQDNSFSGELP------ 421
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 214 ehNQFSKINFAHF-------------PRLFNLRSIYLQWNRIRSISQGLTWTWSS--LHNLDLSGNDIQGIEPGTFKCLP 278
Cdd:PLN00113 422 --SEFTKLPLVYFldisnnnlqgrinSRKWDMPSLQMLSLARNKFFGGLPDSFGSkrLENLDLSRNQFSGAVPRKLGSLS 499
|
250 260 270
....*....|....*....|....*....|....
gi 1060099280 279 NLQKLNLDSNKLTNISQETVNAWISLISITLSGN 312
Cdd:PLN00113 500 ELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHN 533
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
158-242 |
2.55e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 50.60 E-value: 2.55e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 158 RKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGllklkelhlehnqfskinfahfprLFNLRSIYL 237
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSG------------------------LPSLRYLDL 56
|
....*
gi 1060099280 238 QWNRI 242
Cdd:pfam13855 57 SGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
85-291 |
1.17e-06 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 50.82 E-value: 1.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 85 LNQLIWLYLDHNYISSVDEDAFQGIRR---LKELILSSNKITYLHNKTF-----HPVPNLRNLDLSYNKLQTLQSEQ--- 153
Cdd:cd00116 80 GCGLQELDLSDNALGPDGCGVLESLLRsssLQELKLNNNGLGDRGLRLLakglkDLPPALEKLVLGRNRLEGASCEAlak 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 154 -FKGLRKLIILHLRSNSLKTVPIRV----FQDCRNLDFLDLGYNRLRSLSRNAFAGLlklkelhlehnqfskinfahFPR 228
Cdd:cd00116 160 aLRANRDLKELNLANNGIGDAGIRAlaegLKANCNLEVLDLNNNGLTDEGASALAET--------------------LAS 219
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1060099280 229 LFNLRSIYLQWNRIRS-----ISQGLTWTWSSLHNLDLSGNDIQGIEPGTF----KCLPNLQKLNLDSNKLT 291
Cdd:cd00116 220 LKSLEVLNLGDNNLTDagaaaLASALLSPNISLLTLSLSCNDITDDGAKDLaevlAEKESLLELDLRGNKFG 291
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
87-295 |
1.66e-06 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 51.24 E-value: 1.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 87 QLIWLYLDHNYISSVDEDaFQGirRLKELILSSNKITYLHNKtfhpVPN-LRNLDLSYNKLQTLQSEQFKGLRKLIILHl 165
Cdd:PRK15370 200 QITTLILDNNELKSLPEN-LQG--NIKTLYANSNQLTSIPAT----LPDtIQEMELSINRITELPERLPSALQSLDLFH- 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 166 rsNSLKTVPIRVFQDCRNLDFLDlgyNRLRSLSRNAFAGLLKLkelhlehNQFSKiNFAHFPRLF--NLRSIYLQWNRIR 243
Cdd:PRK15370 272 --NKISCLPENLPEELRYLSVYD---NSIRTLPAHLPSGITHL-------NVQSN-SLTALPETLppGLKTLEAGENALT 338
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1060099280 244 SISQGLTwtwSSLHNLDLSGNDIQgIEPGTFKclPNLQKLNLDSNKLTNISQ 295
Cdd:PRK15370 339 SLPASLP---PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALTNLPE 384
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
58-312 |
2.29e-06 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 50.62 E-value: 2.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 58 ENISGGSQGLSLRFNSIQ--KLKSNQFAGlnqliwlyldhnyisSVDEDAFQGIRRLKELILSSNKITYLHNKTFhpVPN 135
Cdd:PLN00113 79 KNISGKISSAIFRLPYIQtiNLSNNQLSG---------------PIPDDIFTTSSSLRYLNLSNNNFTGSIPRGS--IPN 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 136 LRNLDLSYNKLQtlqseqfkglrkliilhlrsnslKTVP--IRVFQdcrNLDFLDLGYNRLRSLSRNAFAGLLKLKELHL 213
Cdd:PLN00113 142 LETLDLSNNMLS-----------------------GEIPndIGSFS---SLKVLDLGGNVLVGKIPNSLTNLTSLEFLTL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 214 EHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNI 293
Cdd:PLN00113 196 ASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGP 275
|
250
....*....|....*....
gi 1060099280 294 SQETVNAWISLISITLSGN 312
Cdd:PLN00113 276 IPPSIFSLQKLISLDLSDN 294
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
62-312 |
2.12e-05 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 47.09 E-value: 2.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 62 GGSQGLSLRFNSIQKLKSNQFAGLNQLIWL---YLDHNYISSvdedafQGIRRLKE----------LILSSNKITYL--- 125
Cdd:COG5238 153 GNAVHLLGLAARLGLLAAISMAKALQNNSVetvYLGCNQIGD------EGIEELAEaltqnttvttLWLKRNPIGDEgae 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 126 -------HNKTfhpvpnLRNLDLSYNKLqtlqseqfkGLRKLIIL--HLRSNslktvpirvfqdcRNLDFLDLGYNRL-- 194
Cdd:COG5238 227 ilaealkGNKS------LTTLDLSNNQI---------GDEGVIALaeALKNN-------------TTVETLYLSGNQIga 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 195 ---RSLSrNAFAGLLKLKELHLEHNQF---SKINFA-HFPRLFNLRSIYLQWNRI-----RSISQGLtWTWSSLHNLDLS 262
Cdd:COG5238 279 egaIALA-KALQGNTTLTSLDLSVNRIgdeGAIALAeGLQGNKTLHTLNLAYNGIgaqgaIALAKAL-QENTTLHSLDLS 356
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1060099280 263 GNDI--QGIEpGTFKCL---PNLQKLNLDSNKLTNISQETVNAWI---SLISITLSGN 312
Cdd:COG5238 357 DNQIgdEGAI-ALAKYLegnTTLRELNLGKNNIGKQGAEALIDALqtnRLHTLILDGN 413
|
|
| LRR_9 |
pfam14580 |
Leucine-rich repeat; |
67-186 |
2.52e-05 |
|
Leucine-rich repeat;
Pssm-ID: 405295 [Multi-domain] Cd Length: 175 Bit Score: 45.14 E-value: 2.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 67 LSLRFNSIQKLKsNQFAGLNQLIWLYLDHNYISSVDedAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKL 146
Cdd:pfam14580 24 LDLRGYKIPIIE-NLGATLDQFDTIDFSDNEIRKLD--GFPLLRRLKTLLLNNNRICRIGEGLGEALPNLTELILTNNNL 100
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1060099280 147 QTL-QSEQFKGLRKLIILHLRSNSLKTVP------IRVFQDCRNLDF 186
Cdd:pfam14580 101 QELgDLDPLASLKKLTFLSLLRNPVTNKPhyrlyvIYKVPQLRLLDF 147
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
134-298 |
3.49e-05 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 46.19 E-value: 3.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 134 PNLRNLDLSYNKLQTLQSEQFKGLRK---LIILHLRSNSL-----KTVpIRVFQDCR-NLDFLDLGYNRLRSLSRNAFAG 204
Cdd:cd00116 81 CGLQELDLSDNALGPDGCGVLESLLRsssLQELKLNNNGLgdrglRLL-AKGLKDLPpALEKLVLGRNRLEGASCEALAK 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 205 LLKLKEL----HLEHNQFSKINFAH----FPRLFNLRSIYLQWNRIRS-----ISQGLTwTWSSLHNLDLSGN-----DI 266
Cdd:cd00116 160 ALRANRDlkelNLANNGIGDAGIRAlaegLKANCNLEVLDLNNNGLTDegasaLAETLA-SLKSLEVLNLGDNnltdaGA 238
|
170 180 190
....*....|....*....|....*....|..
gi 1060099280 267 QGIEPGTFKCLPNLQKLNLDSNKLTNISQETV 298
Cdd:cd00116 239 AALASALLSPNISLLTLSLSCNDITDDGAKDL 270
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| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
255-294 |
7.95e-05 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 40.31 E-value: 7.95e-05
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 1060099280 255 SLHNLDLSGNDIQGIEPgtFKCLPNLQKLNLDSN-KLTNIS 294
Cdd:pfam12799 2 NLEVLDLSNNQITDIPP--LAKLPNLETLDLSGNnKITDLS 40
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| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
77-194 |
1.46e-04 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 44.84 E-value: 1.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 77 LKSNQFAG--------LNQLIWLYLDHNYISSVDEDAFqGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQT 148
Cdd:PLN00113 435 ISNNNLQGrinsrkwdMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSG 513
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1060099280 149 LQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRL 194
Cdd:PLN00113 514 EIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQL 559
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| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
227-291 |
3.70e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 43.27 E-value: 3.70e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1060099280 227 PRLFNLRSIYLQWNRIR---SISQGltwTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLT 291
Cdd:PLN03150 439 SKLRHLQSINLSGNSIRgniPPSLG---SITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLS 503
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| LRR_5 |
pfam13306 |
BspA type Leucine rich repeat region (6 copies); This family includes a number of leucine rich ... |
96-184 |
1.35e-03 |
|
BspA type Leucine rich repeat region (6 copies); This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.
Pssm-ID: 463839 [Multi-domain] Cd Length: 127 Bit Score: 39.07 E-value: 1.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 96 NYISSVDEDAFQGIRRLKELILSSN---------------------KITYLHNKTFHPVPNLRNLDLSyNKLQTLQSEQF 154
Cdd:pfam13306 20 SSLTSIGEYAFSNCTSLKSITLPSSltsigsyafyncsltsitipsSLTSIGEYAFSNCSNLKSITLP-SNLTSIGSYAF 98
|
90 100 110
....*....|....*....|....*....|..
gi 1060099280 155 KG--LRKLIIlhlrSNSLKTVPIRVFQDCRNL 184
Cdd:pfam13306 99 SNcsLKSITI----PSSVTTIGSYAFSNCSNL 126
|
|
| LRR_9 |
pfam14580 |
Leucine-rich repeat; |
216-292 |
1.98e-03 |
|
Leucine-rich repeat;
Pssm-ID: 405295 [Multi-domain] Cd Length: 175 Bit Score: 39.36 E-value: 1.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 216 NQFSKINFA--------HFPRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQ---GIEPgtFKCLPNLQKLN 284
Cdd:pfam14580 42 DQFDTIDFSdneirkldGFPLLRRLKTLLLNNNRICRIGEGLGEALPNLTELILTNNNLQelgDLDP--LASLKKLTFLS 119
|
....*...
gi 1060099280 285 LDSNKLTN 292
Cdd:pfam14580 120 LLRNPVTN 127
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
252-312 |
2.47e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 40.95 E-value: 2.47e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1060099280 252 TWSSLH---NLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISLISITLSGN 312
Cdd:PLN03150 437 DISKLRhlqSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGN 500
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| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
134-168 |
3.32e-03 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 35.68 E-value: 3.32e-03
10 20 30
....*....|....*....|....*....|....*
gi 1060099280 134 PNLRNLDLSYNKLQTLQSeqFKGLRKLIILHLRSN 168
Cdd:pfam12799 1 PNLEVLDLSNNQITDIPP--LAKLPNLETLDLSGN 33
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
67-146 |
6.76e-03 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 39.45 E-value: 6.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1060099280 67 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKL 146
Cdd:PLN00113 480 LDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQL 559
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
111-148 |
7.90e-03 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 34.53 E-value: 7.90e-03
10 20 30
....*....|....*....|....*....|....*...
gi 1060099280 111 RLKELILSSNKITYLhnKTFHPVPNLRNLDLSYNKLQT 148
Cdd:pfam12799 2 NLEVLDLSNNQITDI--PPLAKLPNLETLDLSGNNKIT 37
|
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