|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
202-918 |
1.52e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 72.01 E-value: 1.52e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 202 KMNRYDKKIDSLMNAVGCLKSEVKMQKGERQMAKRFLEERKEELEEVAHELAETEHENTVLRHNIERMKEEKDFTILQKK 281
Cdd:TIGR02168 275 EVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELE 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 282 HLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTFEETNRTLRDLLREQH 361
Cdd:TIGR02168 355 SLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAE 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 362 CKEDSERLMEqqgaLLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRS-KE 440
Cdd:TIGR02168 435 LKELQAELEE----LEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGvKA 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 441 AENSRLCM-----QIKNLERSGNQHKAEVEAIMEqlKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDL 515
Cdd:TIGR02168 511 LLKNQSGLsgilgVLSELISVDEGYEAAIEAALG--GRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQG 588
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 516 YVAEALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVtdlvnqqqtleeKMREDRDSLVERLHRQTAEYSAFKLENERLK 595
Cdd:TIGR02168 589 NDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGV------------LVVDDLDNALELAKKLRPGYRIVTLDGDLVR 656
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 596 ASFApMEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKILK---DEMNKEIEAARRQF 672
Cdd:TIGR02168 657 PGGV-ITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRkelEELSRQISALRKDL 735
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 673 QSQLADLQQLPDILKITEAKLAECQDQLQGYERKnidltaiISDLRSRIEHQGDKLEMAREKHQASQKENKQLSLKVDEL 752
Cdd:TIGR02168 736 ARLEAEVEQLEERIAQLSKELTELEAEIEELEER-------LEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDEL 808
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 753 ErlealgpisvlflgpetfshlavfclvcgsvEGLEALEGTRQTSEEKLLPFQWKLEATSAQNIEFLQVIAKREEAIHQS 832
Cdd:TIGR02168 809 R-------------------------------AELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESL 857
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 833 QLRLEEKTRECGTLARQLESAiEDARRQVEQTKEHALSKERAAQNKILDLETQLSRTKTELSQLRRSRDDADRRYQS--- 909
Cdd:TIGR02168 858 AAEIEELEELIEELESELEAL-LNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGlev 936
|
....*....
gi 1191704915 910 RLQDLKDRL 918
Cdd:TIGR02168 937 RIDNLQERL 945
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
250-755 |
1.78e-12 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 71.59 E-value: 1.78e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 250 HELAETEHENTVLRHniERMKEEKDFTILQKKhlQQEKECLMSKLVEAEmdgaaaaKQVMALKDTIGKLKTEKQMTCTDI 329
Cdd:TIGR04523 180 KEKLNIQKNIDKIKN--KLLKLELLLSNLKKK--IQKNKSLESQISELK-------KQNNQLKDNIEKKQQEINEKTTEI 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 330 NTLTRQkelLLQklsTFEETNRTLRDLLREQHCKEDSERLMEQqgaLLKRLAEADSE-KARLLLLLQDKDKEVEELLQEI 408
Cdd:TIGR04523 249 SNTQTQ---LNQ---LKDEQNKIKKQLSEKQKELEQNNKKIKE---LEKQLNQLKSEiSDLNNQKEQDWNKELKSELKNQ 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 409 QCEKAQAKTasELSKSMESMrghlqaqlrskeaenSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKgdrdKESLKKA 488
Cdd:TIGR04523 320 EKKLEEIQN--QISQNNKII---------------SQLNEQISQLKKELTNSESENSEKQRELEEKQNE----IEKLKKE 378
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 489 IRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLE---EK 565
Cdd:TIGR04523 379 NQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKEliiKN 458
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 566 MREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAA 645
Cdd:TIGR04523 459 LDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKES 538
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 646 QLErcDKENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQG 725
Cdd:TIGR04523 539 KIS--DLEDELNKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLE 616
|
490 500 510
....*....|....*....|....*....|
gi 1191704915 726 DKLEMAREKHQASQKENKQLSLKVDELERL 755
Cdd:TIGR04523 617 KELEKAKKENEKLSSIIKNIKSKKNKLKQE 646
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
256-932 |
2.20e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 71.25 E-value: 2.20e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 256 EHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTC-TDINTLTR 334
Cdd:TIGR02169 222 EYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVkEKIGELEA 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 335 QKELLLQKLstfEETNRTLRDLL-REQHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKA 413
Cdd:TIGR02169 302 EIASLERSI---AEKERELEDAEeRLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDK 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 414 QAKTA-----------SELSKSMESMRGH---LQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGD 479
Cdd:TIGR02169 379 EFAETrdelkdyreklEKLKREINELKREldrLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLE 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 480 RDKESLKKairAQKERAEKSEEYaEQLHVQLADKDLYVAEALSTLESWRSR------------------YNQV-----VK 536
Cdd:TIGR02169 459 QLAADLSK---YEQELYDLKEEY-DRVEKELSKLQRELAEAEAQARASEERvrggraveevlkasiqgvHGTVaqlgsVG 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 537 EKGDLELEI--------IVLND-----------------RVTDL----VNQQQTLEEKMRED------------------ 569
Cdd:TIGR02169 535 ERYATAIEVaagnrlnnVVVEDdavakeaiellkrrkagRATFLplnkMRDERRDLSILSEDgvigfavdlvefdpkyep 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 570 ------RDSLV----ERLHRQTAEYSAFKLENERLKAS-------FAPMEDKLNQAHL--EVQQLKASVKNYEGMIDNYK 630
Cdd:TIGR02169 615 afkyvfGDTLVvediEAARRLMGKYRMVTLEGELFEKSgamtggsRAPRGGILFSRSEpaELQRLRERLEGLKRELSSLQ 694
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 631 SQVMKTRLEADEVAAQLERCdkenkilkdemNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDL 710
Cdd:TIGR02169 695 SELRRIENRLDELSQELSDA-----------SRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKEL 763
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 711 TAIISDLRSRIEHQGDKLE--MAREKHQASQKENKQLSLKVDELERLEAlgpisvlflgpetfshlavfclvcgSVEGLE 788
Cdd:TIGR02169 764 EARIEELEEDLHKLEEALNdlEARLSHSRIPEIQAELSKLEEEVSRIEA-------------------------RLREIE 818
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 789 ALEGTRQTSEEKLlpfQWKLEATSAQNIEFLQVIAKREEAIHQSQLRLEEKTRECGTLA---RQLESAIEDARRQVEQTK 865
Cdd:TIGR02169 819 QKLNRLTLEKEYL---EKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEaalRDLESRLGDLKKERDELE 895
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1191704915 866 EHAlskeRAAQNKILDLETQLSRTKTELSQLrrsrddadrryQSRLQDLKDRLEQSESTNRSMQNYV 932
Cdd:TIGR02169 896 AQL----RELERKIEELEAQIEKKRKRLSEL-----------KAKLEALEEELSEIEDPKGEDEEIP 947
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
329-631 |
1.88e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 68.54 E-value: 1.88e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 329 INTLTRQKELLLQklstFEETNRTLRDL------LREQHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVE 402
Cdd:TIGR02168 202 LKSLERQAEKAER----YKELKAELRELelallvLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVS 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 403 ELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDK 482
Cdd:TIGR02168 278 ELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 483 ESLKKAIRAQKERAEKSEEYAEQLHvQLADKdlyVAEALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTL 562
Cdd:TIGR02168 358 AELEELEAELEELESRLEELEEQLE-TLRSK---VAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEA 433
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 563 E-EKMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMIDNYKS 631
Cdd:TIGR02168 434 ElKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEG 503
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
204-761 |
1.96e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 68.16 E-value: 1.96e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 204 NRYDKKIDSLMNAVGCLKSEVKMQKGERQMAKRFLEERKEELEEVAHELAETEHENTVLRHNIERMKEEKDFTILQKKHL 283
Cdd:TIGR02168 340 AELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERL 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 284 QQEKECLMSKLVEAEMDgaaaakqvmALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTFEETNRTLRDLLREQHCK 363
Cdd:TIGR02168 420 QQEIEELLKKLEEAELK---------ELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQAR 490
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 364 EDS-ERLMEQQ-----------------GALLKRLAEA-------------------------DSEKARL---------- 390
Cdd:TIGR02168 491 LDSlERLQENLegfsegvkallknqsglSGILGVLSELisvdegyeaaieaalggrlqavvveNLNAAKKaiaflkqnel 570
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 391 ---------LLLLQDKDKEVEELLQEIQCEKAQA----KTASELSKSMESMRGH------------LQAQLR-------- 437
Cdd:TIGR02168 571 grvtflpldSIKGTEIQGNDREILKNIEGFLGVAkdlvKFDPKLRKALSYLLGGvlvvddldnaleLAKKLRpgyrivtl 650
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 438 --------------SKEAENSRLCMQ--IKNLErsgnqhkAEVEAIMEQLKELKQKgdrdKESLKKAIRAQKERAEKSEE 501
Cdd:TIGR02168 651 dgdlvrpggvitggSAKTNSSILERRreIEELE-------EKIEELEEKIAELEKA----LAELRKELEELEEELEQLRK 719
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 502 YAEQLHVQLADKDLYVAEALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKmredRDSLVERLHRQT 581
Cdd:TIGR02168 720 ELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAE----IEELEAQIEQLK 795
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 582 AEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCD---------- 651
Cdd:TIGR02168 796 EELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEelieelesel 875
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 652 KENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRI-EHQGDKLEM 730
Cdd:TIGR02168 876 EALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLsEEYSLTLEE 955
|
650 660 670
....*....|....*....|....*....|..
gi 1191704915 731 AREKHQASQKENKQLSLKVDELER-LEALGPI 761
Cdd:TIGR02168 956 AEALENKIEDDEEEARRRLKRLENkIKELGPV 987
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
244-938 |
3.84e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 67.39 E-value: 3.84e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 244 ELEEVAHELAETEHEntvlRHNIERmkeekdftilQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQ 323
Cdd:TIGR02168 240 ELEELQEELKEAEEE----LEELTA----------ELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQ 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 324 MTCTDINTLTRQKELLLQKLSTFEETNRTLRDLLREQhcKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEE 403
Cdd:TIGR02168 306 ILRERLANLERQLEELEAQLEELESKLDELAEELAEL--EEKLEELKEELESLEAELEELEAELEELESRLEELEEQLET 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 404 LLQEI-QCEKAQAKTASELSKsmesmrghLQAQLRSKEAENSRLCMQIKNLERSgnQHKAEVEAIMEQLKELKQkGDRDK 482
Cdd:TIGR02168 384 LRSKVaQLELQIASLNNEIER--------LEARLERLEDRRERLQQEIEELLKK--LEEAELKELQAELEELEE-ELEEL 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 483 ESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRY-------NQVVKEKGDLELEIIVLNDRVTDL 555
Cdd:TIGR02168 453 QEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLegfsegvKALLKNQSGLSGILGVLSELISVD 532
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 556 VNQQQTLEEKMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPM----EDKLNQAHLEVQQLKASVKNYEGMIDNYKS 631
Cdd:TIGR02168 533 EGYEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLdsikGTEIQGNDREILKNIEGFLGVAKDLVKFDP 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 632 Q---VMKTRL----------EADEVAAQLERcdKENKILKDE--------MNKEIEAARRQFQSQLADLQQLPDILKITE 690
Cdd:TIGR02168 613 KlrkALSYLLggvlvvddldNALELAKKLRP--GYRIVTLDGdlvrpggvITGGSAKTNSSILERRREIEELEEKIEELE 690
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 691 AKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMAREKHQASQKENKQLSLKVDEL--ERLEALGPISVLFLGP 768
Cdd:TIGR02168 691 EKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLskELTELEAEIEELEERL 770
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 769 ETFSHLAVFCLvcgsvEGLEALEGTRQTSEEKLlpFQWKLEATSAQNIEFLQviakrEEAIHQSQLRLEEKTRECGTLAR 848
Cdd:TIGR02168 771 EEAEEELAEAE-----AEIEELEAQIEQLKEEL--KALREALDELRAELTLL-----NEEAANLRERLESLERRIAATER 838
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 849 QlesaIEDARRQVEQTKEHALSKErAAQNKILDLETQLSRTKTELSQLRRSRDDADRRYQSRLQDLKDRLEQSESTNRSM 928
Cdd:TIGR02168 839 R----LEDLEEQIEELSEDIESLA-AEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSEL 913
|
730
....*....|
gi 1191704915 929 QNYVQFLKSS 938
Cdd:TIGR02168 914 RRELEELREK 923
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
335-743 |
7.74e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 66.30 E-value: 7.74e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 335 QKELLLQKLSTFEETNRTLRDLLRE-QHCKEDSERLMEQQGALLK-RLAEADSEKARLLLLLQDKDKEVEELL------- 405
Cdd:pfam15921 311 QNSMYMRQLSDLESTVSQLRSELREaKRMYEDKIEELEKQLVLANsELTEARTERDQFSQESGNLDDQLQKLLadlhkre 390
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 406 QEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERS-GNQHKAEVEAI------MEQLKELKQKG 478
Cdd:pfam15921 391 KELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSEcQGQMERQMAAIqgknesLEKVSSLTAQL 470
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 479 DRDKESLKKAIR---AQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRYN------QVVKEKGD------LEL 543
Cdd:pfam15921 471 ESTKEMLRKVVEeltAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDlklqelQHLKNEGDhlrnvqTEC 550
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 544 EIIVLN---------------DRVTDLVNQQQTLEEKMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQA 608
Cdd:pfam15921 551 EALKLQmaekdkvieilrqqiENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDL 630
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 609 HLE--------VQQLKAsVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKILKDEMNKEIEAARRQFQSQLADLQ 680
Cdd:pfam15921 631 ELEkvklvnagSERLRA-VKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELE 709
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1191704915 681 QLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMA-REKHQASQKENK 743
Cdd:pfam15921 710 QTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNAnKEKHFLKEEKNK 773
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
277-758 |
3.77e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.19 E-value: 3.77e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 277 ILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTFEETNRTLRDL 356
Cdd:COG1196 231 LLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEER 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 357 LREQhcKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEI-QCEKAQAKTASELSKSMESMRGHLQAQ 435
Cdd:COG1196 311 RREL--EERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELaEAEEALLEAEAELAEAEEELEELAEEL 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 436 LR------SKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQ 509
Cdd:COG1196 389 LEalraaaELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAEL 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 510 LADKDLY---VAEALSTLESWRSRY--------NQVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKMRED--------R 570
Cdd:COG1196 469 LEEAALLeaaLAELLEELAEAAARLlllleaeaDYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAAleaalaaaL 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 571 DSLVERLHRQTAEYSAFKLENERLKASFAPMeDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERC 650
Cdd:COG1196 549 QNIVVEDDEVAAAAIEYLKAAKAGRATFLPL-DKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTL 627
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 651 DKENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAEcqdQLQgyERKNIDLTAIISDLRSRIEHQGDKLEM 730
Cdd:COG1196 628 VAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLA---ALL--EAEAELEELAERLAEEELELEEALLAE 702
|
490 500
....*....|....*....|....*...
gi 1191704915 731 AREKHQASQKENKQLSLKVDELERLEAL 758
Cdd:COG1196 703 EEEERELAEAEEERLEEELEEEALEEQL 730
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
304-753 |
1.54e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 61.98 E-value: 1.54e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 304 AAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTFEETnrtlrdLLREQHCKEDSERLMEQQGALLKRLAEA 383
Cdd:PRK02224 197 EEKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEV------LEEHEERREELETLEAEIEDLRETIAET 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 384 DSEKARLLLLLQDKDKEVEELLQEIQ-------CEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERS 456
Cdd:PRK02224 271 EREREELAEEVRDLRERLEELEEERDdllaeagLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLRED 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 457 GNQHKAEVEAIMEQLKELkqkgDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRYNQVVK 536
Cdd:PRK02224 351 ADDLEERAEELREEAAEL----ESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELRE 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 537 EKGDLELEIIVLNDRVTDlvNQQ-----------QTLEEKMR----EDRDSLVERLhrqTAEYSAFKLENERLKASFAPM 601
Cdd:PRK02224 427 REAELEATLRTARERVEE--AEAlleagkcpecgQPVEGSPHvetiEEDRERVEEL---EAELEDLEEEVEEVEERLERA 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 602 EDkLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKILKDEMNK---EIEAARRQ---FQSQ 675
Cdd:PRK02224 502 ED-LVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEaeeEAEEAREEvaeLNSK 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 676 LADLQQLPDIL-KITE--AKLAECQDQLQGYERKNIDLTAI-------ISDLRSRI-----EHQGDKLEMAREKHQASQK 740
Cdd:PRK02224 581 LAELKERIESLeRIRTllAAIADAEDEIERLREKREALAELnderrerLAEKRERKreleaEFDEARIEEAREDKERAEE 660
|
490
....*....|...
gi 1191704915 741 ENKQLSLKVDELE 753
Cdd:PRK02224 661 YLEQVEEKLDELR 673
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
252-744 |
5.08e-09 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 60.12 E-value: 5.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 252 LAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINT 331
Cdd:pfam05483 263 LEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNK 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 332 LTRQKELLLqklSTFEETNRTLRDLLR-EQHCKEDSErlmEQQGALLKRLAEADSEKARLLLLLQDKDKEVEEL---LQE 407
Cdd:pfam05483 343 AKAAHSFVV---TEFEATTCSLEELLRtEQQRLEKNE---DQLKIITMELQKKSSELEEMTKFKNNKEVELEELkkiLAE 416
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 408 IQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQL---------------- 471
Cdd:pfam05483 417 DEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELekeklknieltahcdk 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 472 -----KELKQKGDRDKESLKKA------IRAQKERAEKSEEYAEQLHVQLADKDLYVAEAL-STLESWRSRYNQVVKEKG 539
Cdd:pfam05483 497 lllenKELTQEASDMTLELKKHqediinCKKQEERMLKQIENLEEKEMNLRDELESVREEFiQKGDEVKCKLDKSEENAR 576
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 540 DLELEIIVLNDRVTDLVNQQQTLEEKMrEDRDSLVERLHRqtaEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKasv 619
Cdd:pfam05483 577 SIEYEVLKKEKQMKILENKCNNLKKQI-ENKNKNIEELHQ---ENKALKKKGSAENKQLNAYEIKVNKLELELASAK--- 649
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 620 KNYEGMIDNYKSQVMKTRLEADEVAAQLERCdkenKILKDEMNKEIEAARRQFQSQLADL--------QQLPDILKITEA 691
Cdd:pfam05483 650 QKFEEIIDNYQKEIEDKKISEEKLLEEVEKA----KAIADEAVKLQKEIDKRCQHKIAEMvalmekhkHQYDKIIEERDS 725
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 1191704915 692 KLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMAREKHQASQKENKQ 744
Cdd:pfam05483 726 ELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAKE 778
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
369-936 |
1.10e-08 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 59.47 E-value: 1.10e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 369 LMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTA-----SELSKSMESMRGHLQAQLRSKEAEN 443
Cdd:pfam12128 267 YKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAvakdrSELEALEDQHGAFLDADIETAAADQ 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 444 SRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADkdlyvaeALST 523
Cdd:pfam12128 347 EQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLAVAED-------DLQA 419
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 524 LES-WRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQ-TLEEKMR-EDRDSLVER----LHRQTAEYSAFKLENERLKA 596
Cdd:pfam12128 420 LESeLREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATaTPELLLQlENFDERIERareeQEAANAEVERLQSELRQARK 499
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 597 SFAPMEDKLNQAHLEVQQLKASVKNYEGMID----------NYKSQVMKTRLEADEVAAQLERCDkenkiLKDEMNKEIE 666
Cdd:pfam12128 500 RRDQASEALRQASRRLEERQSALDELELQLFpqagtllhflRKEAPDWEQSIGKVISPELLHRTD-----LDPEVWDGSV 574
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 667 AARRQFQSQLADLQQL--PDILKITEA---KLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMAR--------- 732
Cdd:pfam12128 575 GGELNLYGVKLDLKRIdvPEWAASEEElreRLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFARtalknarld 654
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 733 ------EKHQASQKENKQLS----LKVDELERLEAlgPISVLFLGPETFshlavfclvcgsvegLEALEGT-RQTSEEKL 801
Cdd:pfam12128 655 lrrlfdEKQSEKDKKNKALAerkdSANERLNSLEA--QLKQLDKKHQAW---------------LEEQKEQkREARTEKQ 717
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 802 LPFQWKLEATSAQNIEFLQVIAKREEAI--HQSQLRLEEKT----------------RECGTLARQLESAiedARRQVEQ 863
Cdd:pfam12128 718 AYWQVVEGALDAQLALLKAAIAARRSGAkaELKALETWYKRdlaslgvdpdviaklkREIRTLERKIERI---AVRRQEV 794
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 864 TKEHALSKERAAQNKiLDLETQLSRTKTELSQLRRSRDDADRRYQSRLQ----------DLKDRLEQSESTNRSMQNYVQ 933
Cdd:pfam12128 795 LRYFDWYQETWLQRR-PRLATQLSNIERAISELQQQLARLIADTKLRRAklemerkaseKQQVRLSENLRGLRCEMSKLA 873
|
...
gi 1191704915 934 FLK 936
Cdd:pfam12128 874 TLK 876
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
574-923 |
2.22e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 58.41 E-value: 2.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 574 VERLHRQ--TAE-YSAFKLENERLKAsfapmedklNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLErc 650
Cdd:COG1196 202 LEPLERQaeKAErYRELKEELKELEA---------ELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELE-- 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 651 dkENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEM 730
Cdd:COG1196 271 --ELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEE 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 731 AREKHQASQKENKQLSLKVDELERLEAlgpisvlflgpetfshlavfclvcgsvEGLEALEGTRQTSEEkllpfqwkLEA 810
Cdd:COG1196 349 AEEELEEAEAELAEAEEALLEAEAELA---------------------------EAEEELEELAEELLE--------ALR 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 811 TSAQNIEFLQVIAKREEAIHQSQLRLEEKTRECGTLARQLESAIEDARRQVEQTKEHAL---SKERAAQNKILDLETQLS 887
Cdd:COG1196 394 AAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAeleEEEEALLELLAELLEEAA 473
|
330 340 350
....*....|....*....|....*....|....*.
gi 1191704915 888 RTKTELSQLRRSRDDADRRYQSRLQDLKDRLEQSES 923
Cdd:COG1196 474 LLEAALAELLEELAEAAARLLLLLEAEADYEGFLEG 509
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
377-754 |
3.87e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 57.84 E-value: 3.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 377 LKRLAEADSEKARLLLLLQDKDKEVEEL---------LQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLC 447
Cdd:PTZ00121 1396 AKKKAEEDKKKADELKKAAAAKKKADEAkkkaeekkkADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEA 1475
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 448 MQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDK--ESLKKAIRAQK-ERAEKSEEYAEQLHVQLADkDLYVAEALSTL 524
Cdd:PTZ00121 1476 KKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKkaDEAKKAEEAKKaDEAKKAEEAKKADEAKKAE-EKKKADELKKA 1554
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 525 ESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQqqtLEEKMREDRDSLVERLHRQTAEySAFKLENERLKASFAPMEDk 604
Cdd:PTZ00121 1555 EELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKK---AEEARIEEVMKLYEEEKKMKAE-EAKKAEEAKIKAEELKKAE- 1629
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 605 lnqahlEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKILKDEMNKEIEAARRQFQSQLAdlqqlpd 684
Cdd:PTZ00121 1630 ------EEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKK------- 1696
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 685 ilKITEAKLAECQDQLQGYERKNIDltaiisDLRSRIEHQGDKLEMAREKHQASQKENKQlsLKVDELER 754
Cdd:PTZ00121 1697 --EAEEAKKAEELKKKEAEEKKKAE------ELKKAEEENKIKAEEAKKEAEEDKKKAEE--AKKDEEEK 1756
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
360-939 |
8.78e-08 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 56.59 E-value: 8.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 360 QHCKEDSERLMEQQgallKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRS- 438
Cdd:TIGR00606 412 QLCADLQSKERLKQ----EQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAEREl 487
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 439 KEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEE-------YAEQLHVQLA 511
Cdd:TIGR00606 488 SKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQirkiksrHSDELTSLLG 567
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 512 DKDlYVAEALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKMREDRDSLVERLHRQTAEYSAFKLEN 591
Cdd:TIGR00606 568 YFP-NKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESDLERLKE 646
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 592 ERLKAS--FAPMEDKLNQAHLEVQQLKASVKNYEGMIDnyksQVMKTRLEADEVAAQLERCDKENKILKDEMNKEIEAAR 669
Cdd:TIGR00606 647 EIEKSSkqRAMLAGATAVYSQFITQLTDENQSCCPVCQ----RVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKE 722
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 670 RQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMArEKHQASQKENKQLSLKV 749
Cdd:TIGR00606 723 KRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESA-KVCLTDVTIMERFQMEL 801
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 750 DELERlealgpisvlflgpetfsHLAVFCLVCGSVEGLEALEGTRQTSEEKllpfQWKLEATSAQNIEFLQVIAKREEAI 829
Cdd:TIGR00606 802 KDVER------------------KIAQQAAKLQGSDLDRTVQQVNQEKQEK----QHELDTVVSKIELNRKLIQDQQEQI 859
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 830 HQsqlrLEEKTRECGTLARQLESAIEDARRQVEQTKEhaLSKE--------RAAQNKILDLETQLSRTKTELSQLRRSRD 901
Cdd:TIGR00606 860 QH----LKSKTNELKSEKLQIGTNLQRRQQFEEQLVE--LSTEvqslireiKDAKEQDSPLETFLEKDQQEKEELISSKE 933
|
570 580 590
....*....|....*....|....*....|....*...
gi 1191704915 902 DADRRYQSRLQDLKDRLEQSESTNRSMQNYVQFLKSSY 939
Cdd:TIGR00606 934 TSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDY 971
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
302-868 |
1.07e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 56.13 E-value: 1.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 302 AAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTFEETNRTLRDLLREQhckEDSERLMEQQGALLKRLA 381
Cdd:TIGR00618 296 AAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQE---IHIRDAHEVATSIREISC 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 382 EADSEKARLLLLLQDK--DKEVEELL-QEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQ---IKNLER 455
Cdd:TIGR00618 373 QQHTLTQHIHTLQQQKttLTQKLQSLcKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCaaaITCTAQ 452
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 456 SGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQ--------LHVQLADKDLYVAEALStlesw 527
Cdd:TIGR00618 453 CEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEpcplcgscIHPNPARQDIDNPGPLT----- 527
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 528 rSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKMREDRDS---LVERLHRQTAEYSAFKLENERLKaSFAPMEDK 604
Cdd:TIGR00618 528 -RRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSfsiLTQCDNRSKEDIPNLQNITVRLQ-DLTEKLSE 605
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 605 L-------NQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKILKDEMNKEIEAARRqfQSQLA 677
Cdd:TIGR00618 606 AedmlaceQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASR--QLALQ 683
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 678 DLQQLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMAREKHQASQKENKQL---SLKVDELER 754
Cdd:TIGR00618 684 KMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQartVLKARTEAH 763
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 755 LEALGPISVLFLGPETFSHLAvfclvcGSVEGLEALEGTRQTsEEKLLPFQWKLEATSAQNIEFLQV--IAKREEAIHQs 832
Cdd:TIGR00618 764 FNNNEEVTAALQTGAELSHLA------AEIQFFNRLREEDTH-LLKTLEAEIGQEIPSDEDILNLQCetLVQEEEQFLS- 835
|
570 580 590
....*....|....*....|....*....|....*.
gi 1191704915 833 qlRLEEKTRECGTLARQLESAIEDARRQVEQTKEHA 868
Cdd:TIGR00618 836 --RLEEKSATLGEITHQLLKYEECSKQLAQLTQEQA 869
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
328-758 |
2.04e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 54.77 E-value: 2.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 328 DINTLTRQKELLLQKLSTFEETNRTLRDLLREQHCKEDSERLMEQqgalLKRLAEADSEKARLLLLLQDKDKEVEELLQE 407
Cdd:COG4717 79 ELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEK----LLQLLPLYQELEALEAELAELPERLEELEER 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 408 IQCEKAQAKTASELSKSMESMRGHLQAQLR----SKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRdke 483
Cdd:COG4717 155 LEELRELEEELEELEAELAELQEELEELLEqlslATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQ--- 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 484 slkkaIRAQKERAEKSEEYAEQLHVQLAdkdlyVAEALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLE 563
Cdd:COG4717 232 -----LENELEAAALEERLKEARLLLLI-----AAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLG 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 564 EKMREdrdslVERLHRQTAeysafkLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYegmidnyksQVMKTRLEADEV 643
Cdd:COG4717 302 KEAEE-----LQALPALEE------LEEEELEELLAALGLPPDLSPEELLELLDRIEEL---------QELLREAEELEE 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 644 AAQLERCDKENKILKDEMNKEIEAARRQFQSQLADLQQLpdilkitEAKLAECQDQLQGYERKNIDLTAIIS--DLRSRI 721
Cdd:COG4717 362 ELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQEL-------KEELEELEEQLEELLGELEELLEALDeeELEEEL 434
|
410 420 430
....*....|....*....|....*....|....*..
gi 1191704915 722 EHQGDKLEMAREKHQASQKENKQLSLKVDELERLEAL 758
Cdd:COG4717 435 EELEEELEELEEELEELREELAELEAELEQLEEDGEL 471
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
267-929 |
4.51e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 53.97 E-value: 4.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 267 ERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTF 346
Cdd:pfam15921 92 RRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDMLEDSNTQ 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 347 EETNRTLRdLLREQHCKEDSERLMEQQGALLKRLAEADSekaRLLLLLQDKDKEVEELLQEIQCEkaqaktASELSKSME 426
Cdd:pfam15921 172 IEQLRKMM-LSHEGVLQEIRSILVDFEEASGKKIYEHDS---MSTMHFRSLGSAISKILRELDTE------ISYLKGRIF 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 427 SMRGHLQAqLRSKEAENSRLCMQIKN--LERSGNQHKAEVEAIMEQLKELKQKGDrdkeslkkAIRAQKERAEKSEEYAE 504
Cdd:pfam15921 242 PVEDQLEA-LKSESQNKIELLLQQHQdrIEQLISEHEVEITGLTEKASSARSQAN--------SIQSQLEIIQEQARNQN 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 505 QLHV-QLADKDLYVAEALSTLESWRSRYNQVVKEkgdLELEIIVLNDRVTDLVNQQQTLEEK---MREDRDSLVERLHRQ 580
Cdd:pfam15921 313 SMYMrQLSDLESTVSQLRSELREAKRMYEDKIEE---LEKQLVLANSELTEARTERDQFSQEsgnLDDQLQKLLADLHKR 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 581 TAEYSAFKLENERL-------KASFAPMEDKLNQAHLEVQQLKASVKnyegmidnyksqVMKTRLEAdEVAAQLERCDKE 653
Cdd:pfam15921 390 EKELSLEKEQNKRLwdrdtgnSITIDHLRRELDDRNMEVQRLEALLK------------AMKSECQG-QMERQMAAIQGK 456
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 654 NKILK--DEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEhqgdkLEMA 731
Cdd:pfam15921 457 NESLEkvSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVD-----LKLQ 531
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 732 REKHQASQKENKQLSLKVDELERLEALGPISVLFLGPETFSHLAVFCLVCGSVEGLEALEGTRQTSE--EKLLPFQwkle 809
Cdd:pfam15921 532 ELQHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEinDRRLELQ---- 607
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 810 atsaqniEFLQVIAKREEAIHQSQLRLEEKTRECGTLARQLESAIEdARRQVEQTKEHALSKERAAQNKILDLETQLSRT 889
Cdd:pfam15921 608 -------EFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLR-AVKDIKQERDQLLNEVKTSRNELNSLSEDYEVL 679
|
650 660 670 680
....*....|....*....|....*....|....*....|
gi 1191704915 890 KTELSQLRRSRDDADRRYQSRLQDLKDRLEQSESTNRSMQ 929
Cdd:pfam15921 680 KRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSME 719
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
244-761 |
7.54e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 53.40 E-value: 7.54e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 244 ELEEVAHELAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQ 323
Cdd:COG1196 282 ELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELA 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 324 mtcTDINTLTRQKELLLQKLSTFEETNRTLRDLLREQH-CKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVE 402
Cdd:COG1196 362 ---EAEEALLEAEAELAEAEEELEELAEELLEALRAAAeLAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEE 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 403 ELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLcmqiknlersgnqhkAEVEAIMEQLKELKQKGDRDK 482
Cdd:COG1196 439 EEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAEL---------------LEELAEAAARLLLLLEAEADY 503
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 483 ESLKKAIRAQKERAEKSEEYAEqLHVQLADKDLYVAEALSTLESWRSryNQVVKEKGDLELEIIVLND----RVTDLVNQ 558
Cdd:COG1196 504 EGFLEGVKAALLLAGLRGLAGA-VAVLIGVEAAYEAALEAALAAALQ--NIVVEDDEVAAAAIEYLKAakagRATFLPLD 580
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 559 QQTLEEKMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYE------GMIDNYKSQ 632
Cdd:COG1196 581 KIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRlrevtlEGEGGSAGG 660
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 633 VMKTRLEADEVAAQLERcdkenKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDLTA 712
Cdd:COG1196 661 SLTGGSRRELLAALLEA-----EAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAERE 735
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 1191704915 713 IISDLRSRIEHQGDKLEMAREKHQASQKENKQlslKVDELER-LEALGPI 761
Cdd:COG1196 736 ELLEELLEEEELLEEEALEELPEPPDLEELER---ELERLEReIEALGPV 782
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
397-923 |
1.03e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 52.76 E-value: 1.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 397 KDKEVEELLQEIQCEKAQ---AKTASELSKSMESMRGHLQA------QLRSKEAENSRLCMQIKNLERSGNQHKAEVEAI 467
Cdd:PRK03918 147 REKVVRQILGLDDYENAYknlGEVIKEIKRRIERLEKFIKRtenieeLIKEKEKELEEVLREINEISSELPELREELEKL 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 468 MEQLKELKQ------KGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEaLSTLESWRSRYNQVVKEKGDL 541
Cdd:PRK03918 227 EKEVKELEElkeeieELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKE-LKELKEKAEEYIKLSEFYEEY 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 542 ELEIIVLNDRVTDLVNQQQTLEEKMrEDRDSLVERLHRQTAEYSAFKLENERLKASfapmedklnqaHLEVQQLKASVKN 621
Cdd:PRK03918 306 LDELREIEKRLSRLEEEINGIEERI-KELEEKEERLEELKKKLKELEKRLEELEER-----------HELYEEAKAKKEE 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 622 yegmIDNYKSQvmKTRLEADEVAAQLERCDKENKILKDEMnKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQ 701
Cdd:PRK03918 374 ----LERLKKR--LTGLTPEKLEKELEELEKAKEEIEEEI-SKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELT 446
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 702 GYERKNI--DLTAIISDLRSRIEHQGDKLEMAR------EKHQASQKENKQLSLKVDELERLEA-LGPISVLFLGPETFS 772
Cdd:PRK03918 447 EEHRKELleEYTAELKRIEKELKEIEEKERKLRkelrelEKVLKKESELIKLKELAEQLKELEEkLKKYNLEELEKKAEE 526
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 773 HLAVFCLVCG----------SVEGLEALEGTR-------QTSEEKLLPFQWKLEATSAQNIEFLQVIAKREEAIHQ---- 831
Cdd:PRK03918 527 YEKLKEKLIKlkgeikslkkELEKLEELKKKLaelekklDELEEELAELLKELEELGFESVEELEERLKELEPFYNeyle 606
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 832 ---SQLRLEEKTRECGTLARQLESA----------IEDARRQVEQ-TKEHALSKERAAQNKILDLETQLSRTKTELSQLR 897
Cdd:PRK03918 607 lkdAEKELEREEKELKKLEEELDKAfeelaetekrLEELRKELEElEKKYSEEEYEELREEYLELSRELAGLRAELEELE 686
|
570 580
....*....|....*....|....*.
gi 1191704915 898 RSRDDADrryqSRLQDLKDRLEQSES 923
Cdd:PRK03918 687 KRREEIK----KTLEKLKEELEEREK 708
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
346-863 |
1.19e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 52.61 E-value: 1.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 346 FEETNRTLRDLLREQHCKEDSERLMEQQGALLK---RLAEADSEKA-----RLLLLLQDKDKEVEELLQEIQCEKAQAKT 417
Cdd:COG4913 234 FDDLERAHEALEDAREQIELLEPIRELAERYAAareRLAELEYLRAalrlwFAQRRLELLEAELEELRAELARLEAELER 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 418 ASELSKSMESMRGHLQAQLRSKEAEN-SRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERA 496
Cdd:COG4913 314 LEARLDALREELDELEAQIRGNGGDRlEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALL 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 497 EKSEEYAEQLHVQLAD---------KDLYVAEA-LSTLESWRSRYNQV---------------------------VKEK- 538
Cdd:COG4913 394 EALEEELEALEEALAEaeaalrdlrRELRELEAeIASLERRKSNIPARllalrdalaealgldeaelpfvgelieVRPEe 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 539 -----------GDLELEIIV-----------LNDR------VTDLVNQQQTLEEKMREDRDSLVERLHRQTAEYSAFkLE 590
Cdd:COG4913 474 erwrgaiervlGGFALTLLVppehyaaalrwVNRLhlrgrlVYERVRTGLPDPERPRLDPDSLAGKLDFKPHPFRAW-LE 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 591 NErLKASFAPM----EDKLNQAHLEVQQlkasvknyEGMI-DNYKSQVMKTRLEADEV-------AAQLERCDKENKILK 658
Cdd:COG4913 553 AE-LGRRFDYVcvdsPEELRRHPRAITR--------AGQVkGNGTRHEKDDRRRIRSRyvlgfdnRAKLAALEAELAELE 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 659 DEMN------KEIEAARRQFQSQLADLQQLPDI------LKITEAKLAECQDQLQGYERKNIDLTAI---ISDLRSRIEH 723
Cdd:COG4913 624 EELAeaeerlEALEAELDALQERREALQRLAEYswdeidVASAEREIAELEAELERLDASSDDLAALeeqLEELEAELEE 703
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 724 QGDKLEMAREKHQASQKENKQLSLKVDE----LERLEALGPISVLFLGPETFSHLAVFCLVCGSVEGLE----ALEGTRQ 795
Cdd:COG4913 704 LEEELDELKGEIGRLEKELEQAEEELDElqdrLEAAEDLARLELRALLEERFAAALGDAVERELRENLEeridALRARLN 783
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 796 TSEEKLLP------FQWKLE-----ATSAQNIEFLQVIAK-REEAIHQ-----SQLRLEEKTRECGTLARQLESAIEDAR 858
Cdd:COG4913 784 RAEEELERamrafnREWPAEtadldADLESLPEYLALLDRlEEDGLPEyeerfKELLNENSIEFVADLLSKLRRAIREIK 863
|
....*
gi 1191704915 859 RQVEQ 863
Cdd:COG4913 864 ERIDP 868
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
251-722 |
1.26e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 52.63 E-value: 1.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 251 ELAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDIN 330
Cdd:COG1196 324 ELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLE 403
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 331 TLTRQKELLLQKLSTFEETNRTLRDLLREQhcKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQC 410
Cdd:COG1196 404 ELEEAEEALLERLERLEEELEELEEALAEL--EEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAE 481
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 411 EKAQAKTASELSKSMESMRGHLQAQLRS-----KEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLkeLKQKGDRDKESL 485
Cdd:COG1196 482 LLEELAEAAARLLLLLEAEADYEGFLEGvkaalLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAA--LQNIVVEDDEVA 559
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 486 KKAIRAQKERAEKSEeyAEQLHVQLADKDLYVAEALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVnqqQTLEEK 565
Cdd:COG1196 560 AAAIEYLKAAKAGRA--TFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLV---AARLEA 634
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 566 MREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAA 645
Cdd:COG1196 635 ALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEE 714
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 646 QLERCDKENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERK-----NIDLTAI------- 713
Cdd:COG1196 715 ERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREiealgPVNLLAIeeyeele 794
|
490 500
....*....|....*....|....*
gi 1191704915 714 ----------------ISDLRSRIE 722
Cdd:COG1196 795 erydflseqredleeaRETLEEAIE 819
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
643-891 |
1.89e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 1.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 643 VAAQLERCDKENKIlkDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIE 722
Cdd:COG4942 16 AAQADAAAEAEAEL--EQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 723 HQgdklemarEKHQASQKEnkQLSLKVDELERLEALGPISVLfLGPETFSHLAVfclvcgSVEGLEALEGTRQTSEEKLL 802
Cdd:COG4942 94 EL--------RAELEAQKE--ELAELLRALYRLGRQPPLALL-LSPEDFLDAVR------RLQYLKYLAPARREQAEELR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 803 PFQWKLEATSAQNIEFLQVIAKREEAIHQSQLRLEEKTRECGTLARQLESAIEDARRQVEQTKEHALSKERAAQNKILDL 882
Cdd:COG4942 157 ADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
....*....
gi 1191704915 883 ETQLSRTKT 891
Cdd:COG4942 237 AAAAERTPA 245
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
214-710 |
3.23e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 51.27 E-value: 3.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 214 MNAVGCLKSEVKMQKGERQMAKRFLEERkeeleevaheLAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSK 293
Cdd:pfam15921 316 MRQLSDLESTVSQLRSELREAKRMYEDK----------IEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLAD 385
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 294 LVEAEMDGAAAAKQVMALKD-------TIGKLKTEkqmtCTDINTLTRQKELLLQKLSTfeetnrtlrdllreqHCKEDS 366
Cdd:pfam15921 386 LHKREKELSLEKEQNKRLWDrdtgnsiTIDHLRRE----LDDRNMEVQRLEALLKAMKS---------------ECQGQM 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 367 ERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRL 446
Cdd:pfam15921 447 ERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRV 526
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 447 CMQIKNLERSGNQ--HKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYA-------EQLHVQLADKDLYV 517
Cdd:pfam15921 527 DLKLQELQHLKNEgdHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAgamqvekAQLEKEINDRRLEL 606
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 518 AEALSTLESWRSRYNQVVKEKGDLELEIIVL----NDRVTDLVNQQQTLEEKMREDRDSLVErLHRQTAEYSA----FKL 589
Cdd:pfam15921 607 QEFKILKDKKDAKIRELEARVSDLELEKVKLvnagSERLRAVKDIKQERDQLLNEVKTSRNE-LNSLSEDYEVlkrnFRN 685
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 590 ENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEG-------MIDNYKSQVMKTRLEADEVAAQLE-------RCDKENK 655
Cdd:pfam15921 686 KSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGsdghamkVAMGMQKQITAKRGQIDALQSKIQfleeamtNANKEKH 765
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1191704915 656 ILKDEMNK-----------------EIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDL 710
Cdd:pfam15921 766 FLKEEKNKlsqelstvateknkmagELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQRQEQESVRL 837
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
461-920 |
5.32e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 50.42 E-value: 5.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 461 KAEVEAIMEQ-----LKELKQKGDRDKESLKKaIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRYNQVV 535
Cdd:PRK02224 193 KAQIEEKEEKdlherLNGLESELAELDEEIER-YEEQREQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAETE 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 536 KEKGDLEleiivlnDRVTDlvnQQQTLEEkMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQL 615
Cdd:PRK02224 272 REREELA-------EEVRD---LRERLEE-LEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAH 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 616 KASVKNYEGMIDNYKSQVMKTRLEADEVAAqlercdkenkilkdemnkEIEAARRQFQSQLADLQQLPDILKITEAKLAE 695
Cdd:PRK02224 341 NEEAESLREDADDLEERAEELREEAAELES------------------ELEEAREAVEDRREEIEELEEEIEELRERFGD 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 696 CQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMAREkhqasqkenkqlslKVDELERLEALGPISVLFLGPETFSHLA 775
Cdd:PRK02224 403 APVDLGNAEDFLEELREERDELREREAELEATLRTARE--------------RVEEAEALLEAGKCPECGQPVEGSPHVE 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 776 VFCLVCGSVEGLEA----LEGTRQTSEEKLLPFQWKLEA-----TSAQNIEFL-QVIAKREEAIHQSQLRLEEKTREcgt 845
Cdd:PRK02224 469 TIEEDRERVEELEAeledLEEEVEEVEERLERAEDLVEAedrieRLEERREDLeELIAERRETIEEKRERAEELRER--- 545
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1191704915 846 lARQLESAIEDARRQVEQTKEHAlskeRAAQNKILDLETQLSRTKTELSQLR--RSRDDADRRYQSRLQDLKDRLEQ 920
Cdd:PRK02224 546 -AAELEAEAEEKREAAAEAEEEA----EEAREEVAELNSKLAELKERIESLEriRTLLAAIADAEDEIERLREKREA 617
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
459-862 |
5.88e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.45 E-value: 5.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 459 QHKAEVEAIMEQLKELKQKGDRdKESLKKAIRAQKERAEKSEEYAEQLHVQLADK-DLYVAEALSTLESWRSRYNQVVKE 537
Cdd:TIGR02169 167 EFDRKKEKALEELEEVEENIER-LDLIIDEKRQQLERLRREREKAERYQALLKEKrEYEGYELLKEKEALERQKEAIERQ 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 538 KGDLELEIIVLNDRVTDLVnqqQTLEEKmREDRDSLVERLHRQTA-EYSAFKLENERLKASFAPMEDKLNQAHLEVQQLK 616
Cdd:TIGR02169 246 LASLEEELEKLTEEISELE---KRLEEI-EQLLEELNKKIKDLGEeEQLRVKEKIGELEAEIASLERSIAEKERELEDAE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 617 ASVKNYEGMIDNYKSqvmktrleadevaaqlercdkenkilkdemnkEIEAARRQFQSQLADLQQLPDILKITEAKLAec 696
Cdd:TIGR02169 322 ERLAKLEAEIDKLLA--------------------------------EIEELEREIEEERKRRDKLTEEYAELKEELE-- 367
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 697 qdqlqgyerknidltaiisDLRSRIEHQGDKLEMAREKHQASQKENKQLSLKVDELER-LEALGPISVLFLGPETFSHLA 775
Cdd:TIGR02169 368 -------------------DLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKReLDRLQEELQRLSEELADLNAA 428
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 776 vfclVCGSVEGLEALEGTRQTSEEKLLPFQWKLEATSAQNIEFLQVIAKREEAIHQSQLRLEEKTRECGTL---ARQLES 852
Cdd:TIGR02169 429 ----IAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAeaqARASEE 504
|
410
....*....|
gi 1191704915 853 AIEDARRQVE 862
Cdd:TIGR02169 505 RVRGGRAVEE 514
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
348-878 |
6.12e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.52 E-value: 6.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 348 ETNRTLRDLLREQHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMES 427
Cdd:PTZ00121 1221 EDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEE 1300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 428 MRghlQAQLRSKEAENSRlcmQIKNLERSGNQHKAEVEAIMEQLKELKQKGdrdkESLKKAIRAQKERAEKSEEYAEqlh 507
Cdd:PTZ00121 1301 KK---KADEAKKKAEEAK---KADEAKKKAEEAKKKADAAKKKAEEAKKAA----EAAKAEAEAAADEAEAAEEKAE--- 1367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 508 vqlADKdLYVAEALSTLESWRSRYNQVVKEKgdlELEIIVLNDRvtdlvnqQQTLEEKMREDRDSLVERLHRQTAEYSaf 587
Cdd:PTZ00121 1368 ---AAE-KKKEEAKKKADAAKKKAEEKKKAD---EAKKKAEEDK-------KKADELKKAAAAKKKADEAKKKAEEKK-- 1431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 588 KLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEgmiDNYKSQVMKTRLEADEVAAQLERCDKENKILKDEMNKEIEA 667
Cdd:PTZ00121 1432 KADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAE---EAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEA 1508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 668 ARRQFQSQLADLQQLPDILKITEAKlAECQDQLQGYERKNIDLTAIISDLRsriehQGDKLEMAREKHQASQKENKQLSl 747
Cdd:PTZ00121 1509 KKKADEAKKAEEAKKADEAKKAEEA-KKADEAKKAEEKKKADELKKAEELK-----KAEEKKKAEEAKKAEEDKNMALR- 1581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 748 KVDELERLEALGPISVLFLGPETFSHLAVFcLVCGSVEGLEALEGTRQTSEEKLLPFQWKLEATSAQNIEFLQviaKREE 827
Cdd:PTZ00121 1582 KAEEAKKAEEARIEEVMKLYEEEKKMKAEE-AKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELK---KAEE 1657
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 1191704915 828 AIHQSQLRLEEKTRECGTLARQLESAIEDARRQVEQTKEHALSKERAAQNK 878
Cdd:PTZ00121 1658 ENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELK 1708
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
395-608 |
9.42e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 9.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 395 QDKDKEVEELLQEIQcekAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKEL 474
Cdd:COG4942 19 ADAAAEAEAELEQLQ---QEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 475 KQKGDRDKESLKKAIRAQKERAEKSE-------EYAEQLHVQLADKDLYVAEALSTLESWRSRYNQVVKEKGDLELEIIV 547
Cdd:COG4942 96 RAELEAQKEELAELLRALYRLGRQPPlalllspEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1191704915 548 LNDRVTDLVNQQQTLEEKMREdRDSLVERLHRQTAEYSAfklENERLKASFAPMEDKLNQA 608
Cdd:COG4942 176 LEALLAELEEERAALEALKAE-RQKLLARLEKELAELAA---ELAELQQEAEELEALIARL 232
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
363-942 |
1.42e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 49.27 E-value: 1.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 363 KEDSERLMEQQGALLKRLAEADSEKARLLLLLQdkdkEVEELLQEIqcEKAQAKTASElsksmESMRGHLQAQLRSKEAE 442
Cdd:PRK02224 219 DEEIERYEEQREQARETRDEADEVLEEHEERRE----ELETLEAEI--EDLRETIAET-----EREREELAEEVRDLRER 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 443 NSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKK---AIRAQKERAEKSEEYAEQLHVQLADKDLYVAE 519
Cdd:PRK02224 288 LEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEEcrvAAQAHNEEAESLREDADDLEERAEELREEAAE 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 520 ALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLE---EKMREDRDSLVERLHRQTAEYSAFK---LENER 593
Cdd:PRK02224 368 LESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEdflEELREERDELREREAELEATLRTARervEEAEA 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 594 LKASFA------PMEDklnQAHLEVqqlkasvknyegmIDNYKSQVMKtrLEADEVAAQLERCDKENKILKDEMNKEIEA 667
Cdd:PRK02224 448 LLEAGKcpecgqPVEG---SPHVET-------------IEEDRERVEE--LEAELEDLEEEVEEVEERLERAEDLVEAED 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 668 ARRQFQSQLADLQQLpdiLKITEAKLAECQDQLQGyerknidLTAIISDLRSRIEHQGDKLEMAREKHQASQKENKQLSL 747
Cdd:PRK02224 510 RIERLEERREDLEEL---IAERRETIEEKRERAEE-------LRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNS 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 748 KVDEL-ERLEALGPIsvlflgpetfshlavfclvcgsVEGLEALEGTRQTSEEkllpFQWKLEATSAQNIEflqviaKRE 826
Cdd:PRK02224 580 KLAELkERIESLERI----------------------RTLLAAIADAEDEIER----LREKREALAELNDE------RRE 627
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 827 eaihqsqlRLEEKtREcgtLARQLESAIEDARrqVEQTKEhalSKERAAQnKILDLETQLSRTKTELSQLRRSRDDADRR 906
Cdd:PRK02224 628 --------RLAEK-RE---RKRELEAEFDEAR--IEEARE---DKERAEE-YLEQVEEKLDELREERDDLQAEIGAVENE 689
|
570 580 590
....*....|....*....|....*....|....*.
gi 1191704915 907 YQsRLQDLKDRLEQSESTnrsmqnyVQFLKSSYANV 942
Cdd:PRK02224 690 LE-ELEELRERREALENR-------VEALEALYDEA 717
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
249-499 |
2.44e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 2.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 249 AHELAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTD 328
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 329 INTLTRQKELLLQKLSTFEETNRtLRDLLREQHCKEDSERLMeqqgaLLKRLAEADSEKArlllllqdkdkevEELlqei 408
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPP-LALLLSPEDFLDAVRRLQ-----YLKYLAPARREQA-------------EEL---- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 409 qceKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKA 488
Cdd:COG4942 156 ---RADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARL 232
|
250
....*....|.
gi 1191704915 489 IRAQKERAEKS 499
Cdd:COG4942 233 EAEAAAAAERT 243
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
187-892 |
2.59e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.14 E-value: 2.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 187 RLSDLSTEDDDSGHCKMNRYDKKIDSLMNAVGCLKSEVK-----MQKGERQMAKRFLeerkeeleevahELAETEHENTV 261
Cdd:TIGR02169 273 LLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAekereLEDAEERLAKLEA------------EIDKLLAEIEE 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 262 LRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKqmtctdintltrqkelllq 341
Cdd:TIGR02169 341 LEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREI------------------- 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 342 klstfEETNRTLRDLLreqhckEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASEL 421
Cdd:TIGR02169 402 -----NELKRELDRLQ------EELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQE 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 422 SKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIME----------QLKELKQK---------GDR-- 480
Cdd:TIGR02169 471 LYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKAsiqgvhgtvaQLGSVGERyataievaaGNRln 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 481 -----DKESLKKAIRAQKER-----------------------------------AEKSEEYAEQLHVQLAD-------- 512
Cdd:TIGR02169 551 nvvveDDAVAKEAIELLKRRkagratflplnkmrderrdlsilsedgvigfavdlVEFDPKYEPAFKYVFGDtlvvedie 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 513 --KDLYVAEALSTLE-------------SWRSRYNQVVKEKGDLELEiiVLNDRVTDLVNQQQTLEEKMRE---DRDSLV 574
Cdd:TIGR02169 631 aaRRLMGKYRMVTLEgelfeksgamtggSRAPRGGILFSRSEPAELQ--RLRERLEGLKRELSSLQSELRRienRLDELS 708
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 575 ERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQvmKTRLEADEVAAQLERCDKEN 654
Cdd:TIGR02169 709 QELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEAR--IEELEEDLHKLEEALNDLEA 786
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 655 KILK---DEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMA 731
Cdd:TIGR02169 787 RLSHsriPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEEL 866
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 732 REKHQASQKENKQLSLKVDEL--ERLEALGPISVLflgpetfshlavfclvcgsVEGLEALEGTRQTSEEKLLPFQWKLE 809
Cdd:TIGR02169 867 EEELEELEAALRDLESRLGDLkkERDELEAQLREL-------------------ERKIEELEAQIEKKRKRLSELKAKLE 927
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 810 ATSAQNIEFLQVIAKREE------AIHQSQLRLEEKTRECGTLARQLESAIED----ARRQVE-QTKEHALSKERAAqnk 878
Cdd:TIGR02169 928 ALEEELSEIEDPKGEDEEipeeelSLEDVQAELQRVEEEIRALEPVNMLAIQEyeevLKRLDElKEKRAKLEEERKA--- 1004
|
810
....*....|....
gi 1191704915 879 ILDLETQLSRTKTE 892
Cdd:TIGR02169 1005 ILERIEEYEKKKRE 1018
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
201-927 |
2.98e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 48.04 E-value: 2.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 201 CKMNRYDKKIDSLMNAVGCLKSEVKMQKGERQMAKRFLEErkeeLEEVAHELAETEHENTVLRHNIERMKEEKDFTILQK 280
Cdd:pfam02463 170 KKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKA----LEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQEL 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 281 KHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTF---------EETNR 351
Cdd:pfam02463 246 LRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDdeeklkeseKEKKK 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 352 TLRDLLREQHCKEDSERLM-EQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELS--KSMESM 428
Cdd:pfam02463 326 AEKELKKEKEEIEELEKELkELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELelKSEEEK 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 429 RGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEY-AEQLH 507
Cdd:pfam02463 406 EAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLvKLQEQ 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 508 VQLADKDLYVAEALSTLESWRSRYNQVVKEKGDLE-LEIIVLNDRVTDLVNQQQTLEEKMREDRDSLVERLHRQTAEYSA 586
Cdd:pfam02463 486 LELLLSRQKLEERSQKESKARSGLKVLLALIKDGVgGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQK 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 587 FKLENERLKASFAPMEDKLNQAHLEVQQL-KASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKILKD------ 659
Cdd:pfam02463 566 LVRALTELPLGARKLRLLIPKLKLPLKSIaVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKEsakake 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 660 -------EMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMAR 732
Cdd:pfam02463 646 sglrkgvSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLAD 725
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 733 EKHQASQKENKQLSLKVDEL--ERLEALGPISVLFLGPETFSHLAVFCLVCGSVEGLEALEGTRQTSEEKLLPFQWKLEA 810
Cdd:pfam02463 726 RVQEAQDKINEELKLLKQKIdeEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRA 805
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 811 TSAQNIEFLQVIAKREEAIHQSQLRLEEKTRE----CGTLARQLESAIEDARRQVEQTKEHALSKERAAQNKILDLETQL 886
Cdd:pfam02463 806 LEEELKEEAELLEEEQLLIEQEEKIKEEELEElaleLKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLK 885
|
730 740 750 760
....*....|....*....|....*....|....*....|.
gi 1191704915 887 SRTKTELSQLRRSRDDADRRYQSRLQDLKDRLEQSESTNRS 927
Cdd:pfam02463 886 DELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEE 926
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
369-676 |
3.86e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 47.43 E-value: 3.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 369 LMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQ-AQLRSKEAENSRLC 447
Cdd:pfam17380 277 IVQHQKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERmAMERERELERIRQE 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 448 MQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEAlstlESW 527
Cdd:pfam17380 357 ERKRELERIRQEEIAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQ----EEA 432
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 528 RSRYNQVVKEKGDLELEIIvlndRVTDLVNQQQtleekmredrdslVERLHRQTAEYSAFKLENERLKASFAPMEDkLNQ 607
Cdd:pfam17380 433 RQREVRRLEEERAREMERV----RLEEQERQQQ-------------VERLRQQEEERKRKKLELEKEKRDRKRAEE-QRR 494
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 608 AHLEvQQLKAsvkNYEGMIDNYKSQVMKTRLEADEVAAQLErcDKENKILKDEMNKEIE-AARRQFQSQL 676
Cdd:pfam17380 495 KILE-KELEE---RKQAMIEEERKRKLLEKEMEERQKAIYE--EERRREAEEERRKQQEmEERRRIQEQM 558
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
449-700 |
6.06e-05 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 46.97 E-value: 6.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 449 QIKNLERSGNQHKAE-VEAIMEQLKELkqkgDRDKESLKKAIRAQK---ERAEKSEEYAEQLhVQLADKDLYVAEALSTl 524
Cdd:PRK10929 31 ELEQAKAAKTPAQAEiVEALQSALNWL----EERKGSLERAKQYQQvidNFPKLSAELRQQL-NNERDEPRSVPPNMST- 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 525 eswrsrynqvvkekGDLELEIIVLNDRVTDLVNQQQTLEEKMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPmEDK 604
Cdd:PRK10929 105 --------------DALEQEILQVSSQLLEKSRQAQQEQDRAREISDSLSQLPQQQTEARRQLNEIERRLQTLGTP-NTP 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 605 LNQAHL-----EVQQLKASVKNYE--GMIDNYKSQVmkTRLEADEVAAQLERCDKENKILKDEMNkeieaARRQFQSQLA 677
Cdd:PRK10929 170 LAQAQLtalqaESAALKALVDELElaQLSANNRQEL--ARLRSELAKKRSQQLDAYLQALRNQLN-----SQRQREAERA 242
|
250 260
....*....|....*....|...
gi 1191704915 678 dlqqlpdiLKITEaKLAECQDQL 700
Cdd:PRK10929 243 --------LESTE-LLAEQSGDL 256
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
226-922 |
6.39e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 46.89 E-value: 6.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 226 MQKGERQMAKRFLEERKEELEEVAhelaetehentvlrhnIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEmdgaaAA 305
Cdd:pfam02463 140 QGGKIEIIAMMKPERRLEIEEEAA----------------GSRLKRKKKEALKKLIEETENLAELIIDLEELK-----LQ 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 306 KQVMALKDTIGKLKTEKQmtctDINTLTRQKELLLQKLSTFEETNRTLRDLLREQHCKEDSE-RLMEQQGALLKRLAEAD 384
Cdd:pfam02463 199 ELKLKEQAKKALEYYQLK----EKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSkQEIEKEEEKLAQVLKEN 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 385 SEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKS----MESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQH 460
Cdd:pfam02463 275 KEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEklkeSEKEKKKAEKELKKEKEEIEELEKELKELEIKREAE 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 461 KAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLaDKDLYVAEALSTLESWRSRYNQVVKEKGD 540
Cdd:pfam02463 355 EEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEE-KEAQLLLELARQLEDLLKEEKKEELEILE 433
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 541 LELEIIVLNDRVTDLVNQQQTLEEKMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVK 620
Cdd:pfam02463 434 EEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLL 513
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 621 NYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQL 700
Cdd:pfam02463 514 ALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKS 593
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 701 QGYERKNIDLTAIISDLRSRIEHQGDKLEMAREKHQASQKENKQLSLKVDELERLEALGPISVLFLGPetfSHLAVFCLV 780
Cdd:pfam02463 594 IAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEK---SEVKASLSE 670
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 781 CGSVEGLEALEGTRQTSEEKLLPFQWKLEATSAQNIEFLQVIAKREEaihQSQLRLEEKTRECGTLARQLESAIEDARRQ 860
Cdd:pfam02463 671 LTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKL---EAEELLADRVQEAQDKINEELKLLKQKIDE 747
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1191704915 861 VEQTKEHALSKERAAQNKILDLETQLSRTKTELSQLRRSRDDADRRYQSRLQDLKDRLEQSE 922
Cdd:pfam02463 748 EEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEE 809
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
468-934 |
7.37e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.68 E-value: 7.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 468 MEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAE-QLHVQLADKDLyvaEALSTLESWRSRYnqvvKEKGDLELEII 546
Cdd:COG4717 70 LKELKELEEELKEAEEKEEEYAELQEELEELEEELEElEAELEELREEL---EKLEKLLQLLPLY----QELEALEAELA 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 547 VLNDRVTDLVNQQQTLEEKMREdrdslVERLHRQTAEYSAfKLENERLKASFApMEDKLNQAHLEVQQLKASVKNYEGMI 626
Cdd:COG4717 143 ELPERLEELEERLEELRELEEE-----LEELEAELAELQE-ELEELLEQLSLA-TEEELQDLAEELEELQQRLAELEEEL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 627 DNYKSQVMKTRLEADEVAAQLERCDKENKILKDEMNKEIEAARRQFQSQLADLQQLpdILKITEAKLAECQdqlqgyerk 706
Cdd:COG4717 216 EEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSL--ILTIAGVLFLVLG--------- 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 707 nidLTAIISDLRSRIEHQGDKlEMAREKHQASQKENKQLSLKvDELERLEALGPISVLFLgPETFSHLAVFCLVCGSVEG 786
Cdd:COG4717 285 ---LLALLFLLLAREKASLGK-EAEELQALPALEELEEEELE-ELLAALGLPPDLSPEEL-LELLDRIEELQELLREAEE 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 787 LEAlEGTRQTSEEKLLPFqwkLEATSAQNIEFLQVIAKREEaihqsqlRLEEKTRECGTLARQLESAIEDARRQVEQTKE 866
Cdd:COG4717 359 LEE-ELQLEELEQEIAAL---LAEAGVEDEEELRAALEQAE-------EYQELKEELEELEEQLEELLGELEELLEALDE 427
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1191704915 867 HALskeraaQNKILDLETQLSRTKTELSQLrrsrddadrryQSRLQDLKDRLEQSESTNRSMQNYVQF 934
Cdd:COG4717 428 EEL------EEELEELEEELEELEEELEEL-----------REELAELEAELEQLEEDGELAELLQEL 478
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
202-501 |
1.18e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.29 E-value: 1.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 202 KMNRYDKKIDSLMNAVGCLKSEVKMQKGERqmAKRFLEERKEELEEVAHEL--AETEHENTVLRHNIERMKEEKDFTILQ 279
Cdd:PTZ00121 1491 KAEEAKKKADEAKKAAEAKKKADEAKKAEE--AKKADEAKKAEEAKKADEAkkAEEKKKADELKKAEELKKAEEKKKAEE 1568
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 280 KKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDintlTRQKELLLQKLSTFEETNRTLRDLLRE 359
Cdd:PTZ00121 1569 AKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEE----AKIKAEELKKAEEEKKKVEQLKKKEAE 1644
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 360 QHCKEDSERLMEQQGAL----LKRLAEADSEKARLLLLLQDKDKEVEELLQEiqcEKAQAKTASELSKSMESMRGHLQaQ 435
Cdd:PTZ00121 1645 EKKKAEELKKAEEENKIkaaeEAKKAEEDKKKAEEAKKAEEDEKKAAEALKK---EAEEAKKAEELKKKEAEEKKKAE-E 1720
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1191704915 436 LRSKEAENSrlcMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEE 501
Cdd:PTZ00121 1721 LKKAEEENK---IKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEE 1783
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
358-931 |
1.29e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.29 E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 358 REQHCKEDSERLMEQQGALLKRLAEADSEKARLLlllqDKDKEVEELLQEIQCEKAQ-AKTASELSKSMESMRGHLQAQL 436
Cdd:PTZ00121 1247 EERNNEEIRKFEEARMAHFARRQAAIKAEEARKA----DELKKAEEKKKADEAKKAEeKKKADEAKKKAEEAKKADEAKK 1322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 437 RSKEAENSRLCMQIKNLE--RSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEY--AEQLHVQlAD 512
Cdd:PTZ00121 1323 KAEEAKKKADAAKKKAEEakKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKkkADEAKKK-AE 1401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 513 KDLYVAEALSTLESWRSRYNQVVKEKGDleleiivlndrvtdlVNQQQTLEEKMREDRDSlvERLHRQTAEysAFKLENE 592
Cdd:PTZ00121 1402 EDKKKADELKKAAAAKKKADEAKKKAEE---------------KKKADEAKKKAEEAKKA--DEAKKKAEE--AKKAEEA 1462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 593 RLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMidNYKSQVMKTRLEADEVAAQLERCDKENK---ILKDEMNKEIEAAR 669
Cdd:PTZ00121 1463 KKKAEEAKKADEAKKKAEEAKKADEAKKKAEEA--KKKADEAKKAAEAKKKADEAKKAEEAKKadeAKKAEEAKKADEAK 1540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 670 RQFQSQLAD-LQQLPDILKITEAKLAEcqDQLQGYERKNIDL--TAIISDLRSRIEHQGDKLEMAREKHQASQ-KENKQL 745
Cdd:PTZ00121 1541 KAEEKKKADeLKKAEELKKAEEKKKAE--EAKKAEEDKNMALrkAEEAKKAEEARIEEVMKLYEEEKKMKAEEaKKAEEA 1618
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 746 SLKVDELERLEAL-GPISVLFLGPETFSHLAVFCLVCGSVEGLEALEGTRQTSEEKLLPFQWKLEATSAQNIEfLQVIAK 824
Cdd:PTZ00121 1619 KIKAEELKKAEEEkKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAA-EALKKE 1697
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 825 REEAIHQSQLRleEKTRECGTLARQLESAIEDARRQVEQTKEHALSKERAAQNKILDLE-----TQLSRTKTELSQLRRS 899
Cdd:PTZ00121 1698 AEEAKKAEELK--KKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEekkkiAHLKKEEEKKAEEIRK 1775
|
570 580 590
....*....|....*....|....*....|..
gi 1191704915 900 RDDADRRYQSRLQDLKDRLEQSESTNRSMQNY 931
Cdd:PTZ00121 1776 EKEAVIEEELDEEDEKRRMEVDKKIKDIFDNF 1807
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
462-755 |
1.41e-04 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 46.20 E-value: 1.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 462 AEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQL---HVQLADKDLYVAE-ALSTLESWR--SRYNQVV 535
Cdd:TIGR01612 540 KEIEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEKEIKDLfdkYLEIDDEIIYINKlKLELKEKIKniSDKNEYI 619
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 536 KEKGDLElEIIVLND------------RVTDLVNQQQT--------LEEKMREDRDSLVERLHRQTAEYSafkLENERLK 595
Cdd:TIGR01612 620 KKAIDLK-KIIENNNayidelakispyQVPEHLKNKDKiystikseLSKIYEDDIDALYNELSSIVKENA---IDNTEDK 695
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 596 ASFAPMEDKLNQAHLEVQQLK-ASVKNYEGMIDNYKSQVMKTRLEADEVAAQlERCDKENKILKDEMNKEieaarRQFQS 674
Cdd:TIGR01612 696 AKLDDLKSKIDKEYDKIQNMEtATVELHLSNIENKKNELLDIIVEIKKHIHG-EINKDLNKILEDFKNKE-----KELSN 769
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 675 QLADLQQLPDILKITEAKLAECQDQLQgyERKNIDLTaiisdlrsriehqgdKLEMAREKHQASQKENKQLSLKVDELER 754
Cdd:TIGR01612 770 KINDYAKEKDELNKYKSKISEIKNHYN--DQINIDNI---------------KDEDAKQNYDKSKEYIKTISIKEDEIFK 832
|
.
gi 1191704915 755 L 755
Cdd:TIGR01612 833 I 833
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
244-755 |
1.64e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.44 E-value: 1.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 244 ELEEVAHELAETEHENTVLRHNIERMKEEKdftilqkkhlqQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQ 323
Cdd:PRK03918 201 ELEEVLREINEISSELPELREELEKLEKEV-----------KELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIE 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 324 MTCTDINTLtRQKELLLQKLSTFEETNRTLRDLLRE-----QHCKEDSERLMEQQGALLKRLAEADSEKARLllllqdkd 398
Cdd:PRK03918 270 ELKKEIEEL-EEKVKELKELKEKAEEYIKLSEFYEEyldelREIEKRLSRLEEEINGIEERIKELEEKEERL-------- 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 399 KEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQaQLRSKEAENS--RLCMQIKNLERSGNQHKAEVEAIMEQLKELKQ 476
Cdd:PRK03918 341 EELKKKLKELEKRLEELEERHELYEEAKAKKEELE-RLKKRLTGLTpeKLEKELEELEKAKEEIEEEISKITARIGELKK 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 477 KgdrdKESLKKAIRAQKE--------RAEKSEEYAEQLhvqLADKDLYVAEALSTLESWRSRYNQVVKEKGDLELEIIVL 548
Cdd:PRK03918 420 E----IKELKKAIEELKKakgkcpvcGRELTEEHRKEL---LEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKE 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 549 ND--RVTDLVNQQQTLEEKMREDRdslVERLHRQTAEYSAFKLENERLKASFAPMEDKLNqahlEVQQLKASVKNYEGMI 626
Cdd:PRK03918 493 SEliKLKELAEQLKELEEKLKKYN---LEELEKKAEEYEKLKEKLIKLKGEIKSLKKELE----KLEELKKKLAELEKKL 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 627 DNYKSqvmktrlEADEVAAQLERCDKENKILKDEMNKEIEAARRQFQSqladLQQLPDILKITEAKLAECQDQLQGYERK 706
Cdd:PRK03918 566 DELEE-------ELAELLKELEELGFESVEELEERLKELEPFYNEYLE----LKDAEKELEREEKELKKLEEELDKAFEE 634
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 1191704915 707 NIDLTAIISDLRSRIEHQG-----DKLEMAREKHQASQKENKQLSLKVDELERL 755
Cdd:PRK03918 635 LAETEKRLEELRKELEELEkkyseEEYEELREEYLELSRELAGLRAELEELEKR 688
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
545-758 |
1.66e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 45.39 E-value: 1.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 545 IIVLNDRVTDLVNQQQTLEEKMREDRDsLVERLHRQTAEysafklENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEG 624
Cdd:PHA02562 176 IRELNQQIQTLDMKIDHIQQQIKTYNK-NIEEQRKKNGE------NIARKQNKYDELVEEAKTIKAEIEELTDELLNLVM 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 625 MIDNYKSQVMKTRLEADEVAAQLERCDKENKILKDemNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYE 704
Cdd:PHA02562 249 DIEDPSAALNKLNTAAAKIKSKIEQFQKVIKMYEK--GGVCPTCTQQISEGPDRITKIKDKLKELQHSLEKLDTAIDELE 326
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1191704915 705 RKNIDLTAI---ISDLRSRIEHQGDKLEMAREKHQASQKENKQLSLK-VDELERLEAL 758
Cdd:PHA02562 327 EIMDEFNEQskkLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEfVDNAEELAKL 384
|
|
| PTZ00440 |
PTZ00440 |
reticulocyte binding protein 2-like protein; Provisional |
258-710 |
1.94e-04 |
|
reticulocyte binding protein 2-like protein; Provisional
Pssm-ID: 240419 [Multi-domain] Cd Length: 2722 Bit Score: 45.59 E-value: 1.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 258 ENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAE---MDGAAAAKQVMALKDTIgkLKTEKQMTcTDINTLTR 334
Cdd:PTZ00440 729 KYNDLKSSIEEYKEEEEKLEVYKHQIINRKNEFILHLYENDkdlPDGKNTYEEFLQYKDTI--LNKENKIS-NDINILKE 805
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 335 QKELLLQKLSTFEETNRTLRDLLREQHckEDSERLMEQQGALLKRLAEADSEKarlllLLQDKDKEVEELLQEIQCEKAQ 414
Cdd:PTZ00440 806 NKKNNQDLLNSYNILIQKLEAHTEKND--EELKQLLQKFPTEDENLNLKELEK-----EFNENNQIVDNIIKDIENMNKN 878
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 415 AKTASELSKSMESMRGHLQAqlrskeaensrlcmqIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKE 494
Cdd:PTZ00440 879 INIIKTLNIAINRSNSNKQL---------------VEHLLNNKIDLKNKLEQHMKIINTDNIIQKNEKLNLLNNLNKEKE 943
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 495 RAEK--SEEYAEQLHVQLADKDLYVAEA-----------LSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQt 561
Cdd:PTZ00440 944 KIEKqlSDTKINNLKMQIEKTLEYYDKSkeningndgthLEKLDKEKDEWEHFKSEIDKLNVNYNILNKKIDDLIKKQH- 1022
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 562 leEKMREDRDSLVERLHRQTAEYSAFKLEN-ERLKA---SFAPMEDKLNQAHL----EVQQLKASVKNYEGMIDNYKSQV 633
Cdd:PTZ00440 1023 --DDIIELIDKLIKEKGKEIEEKVDQYISLlEKMKTklsSFHFNIDIKKYKNPkikeEIKLLEEKVEALLKKIDENKNKL 1100
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1191704915 634 MKTRLEADEVAAQLERCDKENKILKDEMNKEIEAARRQFQSQLADLQQLPDIL-KITEAKLAECQdqlqgYERKNIDL 710
Cdd:PTZ00440 1101 IEIKNKSHEHVVNADKEKNKQTEHYNKKKKSLEKIYKQMEKTLKELENMNLEDiTLNEVNEIEIE-----YERILIDH 1173
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
250-676 |
2.30e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.14 E-value: 2.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 250 HELAETEHENTVLRHNIERMKEEKDF--TILQKKHLQQEKECLMSKLVEAEmdgaaaaKQVMALKDtigkLKTEKQMTCT 327
Cdd:COG4717 102 EELEELEAELEELREELEKLEKLLQLlpLYQELEALEAELAELPERLEELE-------ERLEELRE----LEEELEELEA 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 328 DINTLTRQKELLLQKLStfeetnrtLRDLLREQHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQD--KDKEVEELL 405
Cdd:COG4717 171 ELAELQEELEELLEQLS--------LATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQleNELEAAALE 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 406 QEIQCEKAQAKTAS----------ELSKSMESMRGHLQAQL-------RSKEAENSRLCMQIKNLERSGNQHKAEVEAIM 468
Cdd:COG4717 243 ERLKEARLLLLIAAallallglggSLLSLILTIAGVLFLVLgllallfLLLAREKASLGKEAEELQALPALEELEEEELE 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 469 EQLKELKQKGDRDKESLKKAIRAQKE------RAEKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRYNQVvkekgdle 542
Cdd:COG4717 323 ELLAALGLPPDLSPEELLELLDRIEElqellrEAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQA-------- 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 543 leiivlnDRVTDLVNQQQTLEEKMREDRDSLVERLHRQTAEysAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNY 622
Cdd:COG4717 395 -------EEYQELKEELEELEEQLEELLGELEELLEALDEE--ELEEELEELEEELEELEEELEELREELAELEAELEQL 465
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1191704915 623 EGmidnyKSQVMKTRLEADEVAAQLERCDKE---NKILKDEMNKEIEAARRQFQSQL 676
Cdd:COG4717 466 EE-----DGELAELLQELEELKAELRELAEEwaaLKLALELLEEAREEYREERLPPV 517
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
331-678 |
2.51e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 45.17 E-value: 2.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 331 TLTRQKELLLQKLSTFEETNRTLR----DLLREQ-------HCKEDSERLMEQQGALLK-RLAEADSE------------ 386
Cdd:pfam01576 640 SLARALEEALEAKEELERTNKQLRaemeDLVSSKddvgknvHELERSKRALEQQVEEMKtQLEELEDElqatedaklrle 719
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 387 ------KARLLLLLQDKD-----------KEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRS-----KEA--E 442
Cdd:pfam01576 720 vnmqalKAQFERDLQARDeqgeekrrqlvKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQIDAankgrEEAvkQ 799
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 443 NSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGD-------RDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDL 515
Cdd:pfam01576 800 LKKLQAQMKDLQRELEEARASRDEILAQSKESEKKLKnleaellQLQEDLAASERARRQAQQERDELADEIASGASGKSA 879
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 516 yVAEALSTLESwrsRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKMREDR------DSLVERLHRQTAEYSA--- 586
Cdd:pfam01576 880 -LQDEKRRLEA---RIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERstsqksESARQQLERQNKELKAklq 955
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 587 ---------FKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKIL 657
Cdd:pfam01576 956 emegtvkskFKSSIAALEAKIAQLEEQLEQESRERQAANKLVRRTEKKLKEVLLQVEDERRHADQYKDQAEKGNSRMKQL 1035
|
410 420
....*....|....*....|....*..
gi 1191704915 658 K------DEMNKEIEAARRQFQSQLAD 678
Cdd:pfam01576 1036 KrqleeaEEEASRANAARRKLQRELDD 1062
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
267-538 |
3.82e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 44.34 E-value: 3.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 267 ERMKEEKdFTILQKKHLQQEKECLMS------KLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKEL-- 338
Cdd:pfam17380 286 ERQQQEK-FEKMEQERLRQEKEEKAReverrrKLEEAEKARQAEMDRQAAIYAEQERMAMERERELERIRQEERKRELer 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 339 -LLQKLSTFEETNRTLRDLLREQHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKT 417
Cdd:pfam17380 365 iRQEEIAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEER 444
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 418 ASELS--KSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQ-LKELKQKG----------DRDKES 484
Cdd:pfam17380 445 AREMErvRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKeLEERKQAMieeerkrkllEKEMEE 524
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1191704915 485 LKKAIRAQKERAEKSEEYAEQLHVQLADKdlyVAEALSTLESWRSRYNQVVKEK 538
Cdd:pfam17380 525 RQKAIYEEERRREAEEERRKQQEMEERRR---IQEQMRKATEERSRLEAMERER 575
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
321-756 |
3.92e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.56 E-value: 3.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 321 EKQMTCTDINTlTRQKELLLQKLSTfEETNRTLRDLLREQhckedSERLMEQQGALLKRLAEADSEKARLLLllqdkdke 400
Cdd:PRK04863 241 ENRMTLEAIRV-TQSDRDLFKHLIT-ESTNYVAADYMRHA-----NERRVHLEEALELRRELYTSRRQLAAE-------- 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 401 vEELLQEIQCE-KAQAKTASELSKSMESMRGHL---QAQLRSKEaensrlcmQIKnlersgnQHKAEVEAIMEQLKELKQ 476
Cdd:PRK04863 306 -QYRLVEMARElAELNEAESDLEQDYQAASDHLnlvQTALRQQE--------KIE-------RYQADLEELEERLEEQNE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 477 KgdrDKESLKKAIRAQkERAEKSEEYAEQLHVQLADkdlyVAEALSTLESWRSRYNQVVK--EK-----GDLELEIIVLN 549
Cdd:PRK04863 370 V---VEEADEQQEENE-ARAEAAEEEVDELKSQLAD----YQQALDVQQTRAIQYQQAVQalERakqlcGLPDLTADNAE 441
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 550 DRVTDLVNQQQTLEEKMR--EDRDSLVERLHRQTAEysAFKLenerlkasfapmedklnqahleVQQLKASVknyegmid 627
Cdd:PRK04863 442 DWLEEFQAKEQEATEELLslEQKLSVAQAAHSQFEQ--AYQL----------------------VRKIAGEV-------- 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 628 nyksqvmkTRLEADEVAAQLERCDKENKILkdemnkeieAARR-QFQSQLADLQQLPDILKITEAKLAECQDQLQGYERK 706
Cdd:PRK04863 490 --------SRSEAWDVARELLRRLREQRHL---------AEQLqQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDD 552
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1191704915 707 NIDLTAIISDLRSRIEHQGDKLEMAREKHQASQKENKQLSLKVDELERLE 756
Cdd:PRK04863 553 EDELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARA 602
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
423-682 |
6.48e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.47 E-value: 6.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 423 KSMESMRGHLQAQLRSKEAENSRLcMQIKnlERSGNQHKAE--VEAIMEQLkeLKQKGDRDKESLKKAIRAQKERAEKSE 500
Cdd:COG3206 114 ASREAAIERLRKNLTVEPVKGSNV-IEIS--YTSPDPELAAavANALAEAY--LEQNLELRREEARKALEFLEEQLPELR 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 501 EYAEQLHVQLADkdlYVAEA-LSTLESwrsRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKMREDRDSLVERLhr 579
Cdd:COG3206 189 KELEEAEAALEE---FRQKNgLVDLSE---EAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELL-- 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 580 QTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMID--------NYKSQVMKTRLEADEVAAQLERCD 651
Cdd:COG3206 261 QSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQqeaqrilaSLEAELEALQAREASLQAQLAQLE 340
|
250 260 270
....*....|....*....|....*....|....*..
gi 1191704915 652 KENKILKD------EMNKEIEAARRQFQSQLADLQQL 682
Cdd:COG3206 341 ARLAELPEleaelrRLEREVEVARELYESLLQRLEEA 377
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
208-670 |
6.95e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.59 E-value: 6.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 208 KKIDSLMNAVGCLKSEVKMQKGERQMAKRFLEERKEELEEVAHELAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEK 287
Cdd:PTZ00121 1366 AEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKK 1445
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 288 -ECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQmtctdintltRQKELLLQKLSTFEETNRTLRDLLREQHCKEDS 366
Cdd:PTZ00121 1446 aDEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEA----------KKADEAKKKAEEAKKKADEAKKAAEAKKKADEA 1515
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 367 ERLMEQQGALLKRLAE----ADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAE 442
Cdd:PTZ00121 1516 KKAEEAKKADEAKKAEeakkADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIE 1595
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 443 NSRLCMQIKNLERSGNQHKAEVEAI-MEQLKELKQKgDRDKESLKKAIRAQKERAE---KSEEYAEQLHVQLADK---DL 515
Cdd:PTZ00121 1596 EVMKLYEEEKKMKAEEAKKAEEAKIkAEELKKAEEE-KKKVEQLKKKEAEEKKKAEelkKAEEENKIKAAEEAKKaeeDK 1674
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 516 YVAEALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLeEKMREDRDSLVERLHRqtaeysafKLENERLK 595
Cdd:PTZ00121 1675 KKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEEL-KKAEEENKIKAEEAKK--------EAEEDKKK 1745
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1191704915 596 ASFAPMEDKLNQahlEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLErCDKENKILKDEMNKEIEAARR 670
Cdd:PTZ00121 1746 AEEAKKDEEEKK---KIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRME-VDKKIKDIFDNFANIIEGGKE 1816
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
334-594 |
7.24e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 43.67 E-value: 7.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 334 RQKELLLQKLSTFEETNRTLRDLLRE-QHCKEDSERLMEQQGALLKRLAEA-DSEKARLLLLLQDKDKEVEELLQEIQCE 411
Cdd:pfam12128 622 AAEEQLVQANGELEKASREETFARTAlKNARLDLRRLFDEKQSEKDKKNKAlAERKDSANERLNSLEAQLKQLDKKHQAW 701
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 412 KAQAK-TASELSKSMESMRGHLQAQLRSKEAensRLCMQIKNLErsgNQHKAEVEAIMEQLK-ELKQKG-DRDKES-LKK 487
Cdd:pfam12128 702 LEEQKeQKREARTEKQAYWQVVEGALDAQLA---LLKAAIAARR---SGAKAELKALETWYKrDLASLGvDPDVIAkLKR 775
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 488 AIR---AQKERAEKSEEYAEQLHVQLAdkdlyvaealstlESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLEE 564
Cdd:pfam12128 776 EIRtleRKIERIAVRRQEVLRYFDWYQ-------------ETWLQRRPRLATQLSNIERAISELQQQLARLIADTKLRRA 842
|
250 260 270
....*....|....*....|....*....|
gi 1191704915 565 KMREDRDSLVERLHRQTAEYSAFKLENERL 594
Cdd:pfam12128 843 KLEMERKASEKQQVRLSENLRGLRCEMSKL 872
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
363-568 |
9.01e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 9.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 363 KEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAE 442
Cdd:COG4942 26 EAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEE 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 443 NSRlcmQIKNLERSGNQHKAEV-------EAIMEQLKELKQKGDRDKESLkKAIRAQKERAEKSEEYAEQLHVQLADKDL 515
Cdd:COG4942 106 LAE---LLRALYRLGRQPPLALllspedfLDAVRRLQYLKYLAPARREQA-EELRADLAELAALRAELEAERAELEALLA 181
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1191704915 516 YVAEALSTLESWRSRYNQVVKEkgdLELEIIVLNDRVTDLVNQQQTLEEKMRE 568
Cdd:COG4942 182 ELEEERAALEALKAERQKLLAR---LEKELAELAAELAELQQEAEELEALIAR 231
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
376-752 |
9.45e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 42.96 E-value: 9.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 376 LLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKtasELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLER 455
Cdd:pfam07888 32 LQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWE---RQRRELESRVAELKEELRQSREKHEELEEKYKELSA 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 456 SGNQHKAEVEAIMEQLKELKQK---GDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDlyvaealSTLESWRSRYN 532
Cdd:pfam07888 109 SSEELSEEKDALLAQRAAHEARireLEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEE-------AERKQLQAKLQ 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 533 QVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKMREDRDSLVERlHRQTAeysafklENERLKASFAPMEDKLNQAHLEV 612
Cdd:pfam07888 182 QTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTA-HRKEA-------ENEALLEELRSLQERLNASERKV 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 613 QQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAK 692
Cdd:pfam07888 254 EGLGEELSSMAAQRDRTQAELHQARLQAAQLTLQLADASLALREGRARWAQERETLQQSAEADKDRIEKLSAELQRLEER 333
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 693 LAECQDQLQGYErknIDLTAIISDLRSRIEHQGDKLEMAREKHQASQKENKQLSLKVDEL 752
Cdd:pfam07888 334 LQEERMEREKLE---VELGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAEKQEL 390
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
359-896 |
1.07e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 42.79 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 359 EQHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASE----LSKSMESMRGHLQA 434
Cdd:pfam05483 228 EEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEkkdhLTKELEDIKMSLQR 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 435 QLRSKEAENSRLCMQIKNLersgNQHKAEVEAIMEQLKELK-------QKGDRDKESLKKAIRAQKERAEKSEEYAEQLH 507
Cdd:pfam05483 308 SMSTQKALEEDLQIATKTI----CQLTEEKEAQMEELNKAKaahsfvvTEFEATTCSLEELLRTEQQRLEKNEDQLKIIT 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 508 VQLADKDLYVAE----------ALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKMREDRDSLV--- 574
Cdd:pfam05483 384 MELQKKSSELEEmtkfknnkevELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTaik 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 575 --ERLHRQTAEYSAFKLENERLKASfaPMEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDK 652
Cdd:pfam05483 464 tsEEHYLKEVEDLKTELEKEKLKNI--ELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEE 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 653 ENKILKDEMnkeiEAARRQFQSQLADLQQLpdiLKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMAR 732
Cdd:pfam05483 542 KEMNLRDEL----ESVREEFIQKGDEVKCK---LDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELH 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 733 EKHQASQK----ENKQLS---LKVDELErLEalgpisvLFLGPETFSHLavfclvcgsVEGLEALEGTRQTSEEKLLPFQ 805
Cdd:pfam05483 615 QENKALKKkgsaENKQLNayeIKVNKLE-LE-------LASAKQKFEEI---------IDNYQKEIEDKKISEEKLLEEV 677
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 806 WKLEATSAQNIEFLQVIAKREEAIHQSQLRLEEKTREcgtlarQLESAIE--DARRQVEQTKEHALSKERAAqnkildLE 883
Cdd:pfam05483 678 EKAKAIADEAVKLQKEIDKRCQHKIAEMVALMEKHKH------QYDKIIEerDSELGLYKNKEQEQSSAKAA------LE 745
|
570
....*....|...
gi 1191704915 884 TQLSRTKTELSQL 896
Cdd:pfam05483 746 IELSNIKAELLSL 758
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
345-878 |
1.10e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 42.89 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 345 TFEETNRTLRDLLREQHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQcEKAQAKTASELSKS 424
Cdd:pfam10174 152 TLGARDESIKKLLEMLQSKGLPKKSGEEDWERTRRIAEAEMQLGHLEVLLDQKEKENIHLREELH-RRNQLQPDPAKTKA 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 425 MESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDrdkeSLKKAIRAQKERAEKSEEYAE 504
Cdd:pfam10174 231 LQTVIEMKDTKISSLERNIRDLEDEVQMLKTNGLLHTEDREEEIKQMEVYKSHSK----FMKNKIDQLKQELSKKESELL 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 505 QLHVQLadkdlyvaEALSTLESWRSRYNQVVKEK--------GDLELEIIVLNDRvtdLVNQQQTLEEKMredrdslvER 576
Cdd:pfam10174 307 ALQTKL--------ETLTNQNSDCKQHIEVLKESltakeqraAILQTEVDALRLR---LEEKESFLNKKT--------KQ 367
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 577 LHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEA---DEVAAQLERCDKE 653
Cdd:pfam10174 368 LQDLTEEKSTLAGEIRDLKDMLDVKERKINVLQKKIENLQEQLRDKDKQLAGLKERVKSLQTDSsntDTALTTLEEALSE 447
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 654 NKILKDEMNKEIEAARRQFQSQLADLQQLpdiLKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDK---LEM 730
Cdd:pfam10174 448 KERIIERLKEQREREDRERLEELESLKKE---NKDLKEKVSALQPELTEKESSLIDLKEHASSLASSGLKKDSKlksLEI 524
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 731 AREKHQASQKENKQLSLKVDELERLEALGP---ISVLFLGPETFSHLAVFCLVCGSVEGLeaLEGTRQTSEEK------- 800
Cdd:pfam10174 525 AVEQKKEECSKLENQLKKAHNAEEAVRTNPeinDRIRLLEQEVARYKEESGKAQAEVERL--LGILREVENEKndkdkki 602
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 801 -----LLPFQWKLEATSAQNIEFLQVIAKREEAIHQSQLRLEEKTRECGTLARQLE---SAIEDARRQVEQTKEHALSKE 872
Cdd:pfam10174 603 aelesLTLRQMKEQNKKVANIKHGQQEMKKKGAQLLEEARRREDNLADNSQQLQLEelmGALEKTRQELDATKARLSSTQ 682
|
....*.
gi 1191704915 873 RAAQNK 878
Cdd:pfam10174 683 QSLAEK 688
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
251-706 |
1.23e-03 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 42.73 E-value: 1.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 251 ELAETEHENTVLRHNIERMK------EEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQM 324
Cdd:TIGR00606 599 ELASLEQNKNHINNELESKEeqlssyEDKLFDVCGSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQS 678
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 325 TCTDINTLTRQKELLLQKLSTFEETNRTLRDllrEQHCKEDSERLMEQQGALLKRLAEAdseKARLLLLLQDKDKEVEEL 404
Cdd:TIGR00606 679 CCPVCQRVFQTEAELQEFISDLQSKLRLAPD---KLKSTESELKKKEKRRDEMLGLAPG---RQSIIDLKEKEIPELRNK 752
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 405 LQEIQCEKAQAKtaSELSKSmESMRGHLQAQLRSKEAENS------RLCMQIKNLERSGNQHKAEVEAI--MEQLKELKQ 476
Cdd:TIGR00606 753 LQKVNRDIQRLK--NDIEEQ-ETLLGTIMPEEESAKVCLTdvtimeRFQMELKDVERKIAQQAAKLQGSdlDRTVQQVNQ 829
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 477 KGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRyNQVVKEKGDLELEIIVLNDRVTDLV 556
Cdd:TIGR00606 830 EKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRR-QQFEEQLVELSTEVQSLIREIKDAK 908
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 557 NQQQTLEEKMREDRDSLVERLHRQtaeysafklENERLKAsfapmEDKLNQAHLEVQQLKASVKNYEGMI-DNYKSQVMK 635
Cdd:TIGR00606 909 EQDSPLETFLEKDQQEKEELISSK---------ETSNKKA-----QDKVNDIKEKVKNIHGYMKDIENKIqDGKDDYLKQ 974
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1191704915 636 TRLEADEVAAQLERCDKEnkilKDEMNKEIEAARRQFQSQLADLQQLPD--ILKITEAKLAECQDQLQGYERK 706
Cdd:TIGR00606 975 KETELNTVNAQLEECEKH----QEKINEDMRLMRQDIDTQKIQERWLQDnlTLRKRENELKEVEEELKQHLKE 1043
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
397-529 |
1.40e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 41.88 E-value: 1.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 397 KDKEVEELLQEIQcEKAQAKTASELSK-SMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELK 475
Cdd:PRK09039 51 KDSALDRLNSQIA-ELADLLSLERQGNqDLQDSVANLRASLSAAEAERSRLQALLAELAGAGAAAEGRAGELAQELDSEK 129
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1191704915 476 QKGDRDKESLK------KAIRAQKERAEK----SEEYAEQLHVQLAD--KDLYVAEA--LSTLESWRS 529
Cdd:PRK09039 130 QVSARALAQVEllnqqiAALRRQLAALEAaldaSEKRDRESQAKIADlgRRLNVALAqrVQELNRYRS 197
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
370-526 |
1.58e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.06 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 370 MEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQ---AQLRSKEAENSRL 446
Cdd:COG1579 2 MPEDLRALLDLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLEleiEEVEARIKKYEEQ 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 447 CMQIKNLErsgnqhkaEVEAIMEQLKELKqkgdRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLES 526
Cdd:COG1579 82 LGNVRNNK--------EYEALQKEIESLK----RRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDE 149
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
279-473 |
1.73e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 1.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 279 QKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELllqklstfEETNRTLRDLLR 358
Cdd:COG4913 611 KLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREI--------AELEAELERLDA 682
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 359 EQhckEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKsmESMRGHLQAQLRS 438
Cdd:COG4913 683 SS---DDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLAR--LELRALLEERFAA 757
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1191704915 439 KEAENSRLCM------QIKNLERSGNQHKAEVEAIMEQLKE 473
Cdd:COG4913 758 ALGDAVERELrenleeRIDALRARLNRAEEELERAMRAFNR 798
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
381-646 |
1.78e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 41.74 E-value: 1.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 381 AEADSEKARLLLLLQDKDKEVEELLQEIqcekaqaktaSELSKSMESmrghLQAQLRSKEAENSRLcmqiknlersgnqh 460
Cdd:COG3883 12 AFADPQIQAKQKELSELQAELEAAQAEL----------DALQAELEE----LNEEYNELQAELEAL-------------- 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 461 KAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKeRAEKSEEYAEQLhvqLADKDLyvAEALSTLESWRsrynqvvkekgd 540
Cdd:COG3883 64 QAEIDKLQAEIAEAEAEIEERREELGERARALY-RSGGSVSYLDVL---LGSESF--SDFLDRLSALS------------ 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 541 leleiiVLNDRVTDLVNQQQTLEEKMREDRDSLVErlhrQTAEYSAFKLENERLKASfapMEDKLNQAHLEVQQLKASVK 620
Cdd:COG3883 126 ------KIADADADLLEELKADKAELEAKKAELEA----KLAELEALKAELEAAKAE---LEAQQAEQEALLAQLSAEEA 192
|
250 260
....*....|....*....|....*.
gi 1191704915 621 NYEGMIDNYKSQVMKTRLEADEVAAQ 646
Cdd:COG3883 193 AAEAQLAELEAELAAAEAAAAAAAAA 218
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
490-918 |
1.81e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.25 E-value: 1.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 490 RAQKERAEKSEEyAEQLHVQLADKDLYVAEALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVN--QQQTLEEKMR 567
Cdd:PRK04863 276 RHANERRVHLEE-ALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNLVQTalRQQEKIERYQ 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 568 EDRDSLVERLHRQTaeySAFKLENERLKASfapmEDKLNQAHLEVQQLKASVKNYEGMIDnyksqVMKTRLEADEVAAQL 647
Cdd:PRK04863 355 ADLEELEERLEEQN---EVVEEADEQQEEN----EARAEAAEEEVDELKSQLADYQQALD-----VQQTRAIQYQQAVQA 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 648 ERcdkENKILKDEMNKEIEAARrQFQSQL-ADLQQLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDL-RSRIEHQG 725
Cdd:PRK04863 423 LE---RAKQLCGLPDLTADNAE-DWLEEFqAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQLVRKIAGEVsRSEAWDVA 498
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 726 -DKLEMARE-KHQASQKEnkQLSLKVDELER-------LEALgpisvlflgpetfshLAVFCLVCG-SVEGLEALEGTRQ 795
Cdd:PRK04863 499 rELLRRLREqRHLAEQLQ--QLRMRLSELEQrlrqqqrAERL---------------LAEFCKRLGkNLDDEDELEQLQE 561
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 796 TSEEKLLPFQWKLEATSAQNIEFLQVI----------AKREEAIHQSQLRLEEktrecgtLARQLESAIEDARrQVEQTK 865
Cdd:PRK04863 562 ELEARLESLSESVSEARERRMALRQQLeqlqariqrlAARAPAWLAAQDALAR-------LREQSGEEFEDSQ-DVTEYM 633
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1191704915 866 EHALSKERAAQNKILDLETQLSRTKTELSQLRRSRDDADrryqSRLQDLKDRL 918
Cdd:PRK04863 634 QQLLERERELTVERDELAARKQALDEEIERLSQPGGSED----PRLNALAERF 682
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
262-736 |
2.07e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.08 E-value: 2.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 262 LRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDgaaaakqVMALKDTIGKLKTEKQMTCTDINTLTRQ------ 335
Cdd:pfam01576 101 MQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEED-------ILLLEDQNSKLSKERKLLEERISEFTSNlaeeee 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 336 KELLLQKLSTFEETNRT-LRDLLRE-----QHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQ 409
Cdd:pfam01576 174 KAKSLSKLKNKHEAMISdLEERLKKeekgrQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLE 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 410 CEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQL---KELKQKGDRDKESLK 486
Cdd:pfam01576 254 EETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELEALKTELEDTLDTTaaqQELRSKREQEVTELK 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 487 KAIRAQKERAEKSEEYAEQLHVQladkdlyvaealsTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKm 566
Cdd:pfam01576 334 KALEEETRSHEAQLQEMRQKHTQ-------------ALEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQQA- 399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 567 REDRDSLVERLHRQTAEYSAFKLENERLKASFApmeDKLNQAHLEVQQLKASVKNYEGM-------IDNYKSQVMKTR-L 638
Cdd:pfam01576 400 KQDSEHKRKKLEGQLQELQARLSESERQRAELA---EKLSKLQSELESVSSLLNEAEGKniklskdVSSLESQLQDTQeL 476
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 639 EADEVAAQLE-----RCDKENKILKDEMNKEIEAARRQFQSQLADLQ-QLPDILKITEAKLAECQDQLQGYERKNIDLTA 712
Cdd:pfam01576 477 LQEETRQKLNlstrlRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQaQLSDMKKKLEEDAGTLEALEEGKKRLQRELEA 556
|
490 500
....*....|....*....|....
gi 1191704915 713 IISDLRSRIEhQGDKLEMAREKHQ 736
Cdd:pfam01576 557 LTQQLEEKAA-AYDKLEKTKNRLQ 579
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
276-512 |
2.23e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 41.96 E-value: 2.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 276 TILQKKHLQQEkeclmskLVEAEMD-GAAAAKQVMALKDTIGKLKTEKQmtctdinTLTRQKELLlQKLSTFEETNRTLR 354
Cdd:PRK10929 21 TAPDEKQITQE-------LEQAKAAkTPAQAEIVEALQSALNWLEERKG-------SLERAKQYQ-QVIDNFPKLSAELR 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 355 DLLREQHCKEDSERLMEQQGALLKRLAEADS---EKARLLLLLQDKDKEVEELLQEIQCEKAQAKTA-SELSKSMESMRG 430
Cdd:PRK10929 86 QQLNNERDEPRSVPPNMSTDALEQEILQVSSqllEKSRQAQQEQDRAREISDSLSQLPQQQTEARRQlNEIERRLQTLGT 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 431 ----HLQAQLRSKEAENSRLCMQIKNLER---SGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKER-AEKSEEY 502
Cdd:PRK10929 166 pntpLAQAQLTALQAESAALKALVDELELaqlSANNRQELARLRSELAKKRSQQLDAYLQALRNQLNSQRQReAERALES 245
|
250
....*....|
gi 1191704915 503 AEQLHVQLAD 512
Cdd:PRK10929 246 TELLAEQSGD 255
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
480-695 |
2.26e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.29 E-value: 2.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 480 RDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLEswrsrynqvvkekgDLELEIIVLNDRVTDLVNQQ 559
Cdd:COG4942 27 AELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIR--------------ALEQELAALEAELAELEKEI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 560 QTLEEKMREDRDSLVERL----HRQTAEYSAFKLENERLKASFAPME--DKLNQAHLE----VQQLKASVKNYEGMIDNY 629
Cdd:COG4942 93 AELRAELEAQKEELAELLralyRLGRQPPLALLLSPEDFLDAVRRLQylKYLAPARREqaeeLRADLAELAALRAELEAE 172
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1191704915 630 KSQVMKTRLEADEVAAQLERCDKENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAE 695
Cdd:COG4942 173 RAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
202-695 |
2.29e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.05 E-value: 2.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 202 KMNRYDKKIDSLMNAVGCLKSEVKMQKGERQMAKRFLEERKEELEEVAHELAETEHENTVLRHNIERMKEEKDFTILQKK 281
Cdd:PTZ00121 1399 KAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKK 1478
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 282 HLQQEK-ECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKEllLQKLSTFEETN-----RTLRD 355
Cdd:PTZ00121 1479 AEEAKKaDEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKK--ADEAKKAEEKKkadelKKAEE 1556
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 356 LLREQHCK--EDSERLMEQQGALLKRLAEA-DSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGhl 432
Cdd:PTZ00121 1557 LKKAEEKKkaEEAKKAEEDKNMALRKAEEAkKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKK-- 1634
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 433 QAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLK---ELKQKGDRDKESLKKAIRAQKERAEKSEEY------- 502
Cdd:PTZ00121 1635 VEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKkkaEEAKKAEEDEKKAAEALKKEAEEAKKAEELkkkeaee 1714
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 503 ---AEQLHVQLADKDLYVAEALSTLESWRSRYNQVVKEKGDleleiivlNDRVTDLVNQQQTLEEKMREDRDSLVERLHR 579
Cdd:PTZ00121 1715 kkkAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEE--------KKKIAHLKKEEEKKAEEIRKEKEAVIEEELD 1786
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 580 QTAEYSAFKLEN--ERLKASFAPMEDKLNQAHLEVQQLKAS-VKNYEGMIDNYKSQvmktRLEADEVaaqlercdKENKI 656
Cdd:PTZ00121 1787 EEDEKRRMEVDKkiKDIFDNFANIIEGGKEGNLVINDSKEMeDSAIKEVADSKNMQ----LEEADAF--------EKHKF 1854
|
490 500 510
....*....|....*....|....*....|....*....
gi 1191704915 657 LKDEMNKEIEAARRQFQSQLADLQQlpDILKITEAKLAE 695
Cdd:PTZ00121 1855 NKNNENGEDGNKEADFNKEKDLKED--DEEEIEEADEIE 1891
|
|
| tolA |
PRK09510 |
cell envelope integrity inner membrane protein TolA; Provisional |
357-504 |
2.87e-03 |
|
cell envelope integrity inner membrane protein TolA; Provisional
Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 40.95 E-value: 2.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 357 LREQHCKEDSERLMEQQGALLKRLAEADSEK-ARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQ 435
Cdd:PRK09510 80 QRKKKEQQQAEELQQKQAAEQERLKQLEKERlAAQEQKKQAEEAAKQAALKQKQAEEAAAKAAAAAKAKAEAEAKRAAAA 159
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 436 LRSKEAENSRLCM-QIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAE 504
Cdd:PRK09510 160 AKKAAAEAKKKAEaEAAKKAAAEAKKKAEAEAAAKAAAEAKKKAEAEAKKKAAAEAKKKAAAEAKAAAAK 229
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
280-735 |
3.08e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 41.26 E-value: 3.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 280 KKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTFEETNRTLRDLLRE 359
Cdd:pfam05557 8 KARLSQLQNEKKQMELEHKRARIELEKKASALKRQLDRESDRNQELQKRIRLLEKREAEAEEALREQAELNRLKKKYLEA 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 360 QHCKEDS-----ERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESmrghlqA 434
Cdd:pfam05557 88 LNKKLNEkesqlADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQNLEK------Q 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 435 QLRSKEAEnsrlcMQIKNLER---SGNQHKAEVEAIMEQL-------KELKQ---------KGDRDKESLKKAIRAQKER 495
Cdd:pfam05557 162 QSSLAEAE-----QRIKELEFeiqSQEQDSEIVKNSKSELaripeleKELERlrehnkhlnENIENKLLLKEEVEDLKRK 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 496 AEKSEEYAEQLHV-------------------QLADKDLYVAEALST-LESWRSRYNQVVKEKGDLELEIIVLNDRVTDL 555
Cdd:pfam05557 237 LEREEKYREEAATlelekekleqelqswvklaQDTGLNLRSPEDLSRrIEQLQQREIVLKEENSSLTSSARQLEKARREL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 556 VN-----QQQTLEEKM-REDRDSLVERLHRQTAEYSAfklENERLKASFAPMEDKLNQAHLEvQQLKASVKNYEGMIDNY 629
Cdd:pfam05557 317 EQelaqyLKKIEDLNKkLKRHKALVRRLQRRVLLLTK---ERDGYRAILESYDKELTMSNYS-PQLLERIEEAEDMTQKM 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 630 K--SQVMKTRLEadevaaQLERCDKENKILKDEMNKEIEAARRQfqSQLADLQQLPDILKITEAKLAECQDQlqgyerkn 707
Cdd:pfam05557 393 QahNEEMEAQLS------VAEEELGGYKQQAQTLERELQALRQQ--ESLADPSYSKEEVDSLRRKLETLELE-------- 456
|
490 500
....*....|....*....|....*...
gi 1191704915 708 idltaiisdlRSRIEHQGDKLEMAREKH 735
Cdd:pfam05557 457 ----------RQRLREQKNELEMELERR 474
|
|
| COG4192 |
COG4192 |
Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal ... |
302-578 |
3.31e-03 |
|
Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal transduction mechanisms];
Pssm-ID: 443346 [Multi-domain] Cd Length: 640 Bit Score: 41.21 E-value: 3.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 302 AAAAKQVMALKDTIGKLKTEKQmtctdINTLTRQKELLLQKLSTFEETNRTLRDLLREQhckedsERLMEQQGALL--KR 379
Cdd:COG4192 68 VAALPEFAAATNTTERSQLRNQ-----LNTQLADIEELLAELEQLTQDAGDLRAAVADL------RNLLQQLDSLLtqRI 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 380 LAEADSEKA--RLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENsrlcmQIKNL--ER 455
Cdd:COG4192 137 ALRRRLQELleQINWLHQDFNSELTPLLQEASWQQTRLLDSVETTESLRNLQNELQLLLRLLAIEN-----QIVSLlrEV 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 456 SGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAiraqkeraekSEEYAeqlHVQLADKDLYVAEALSTLESWRSRYNQVV 535
Cdd:COG4192 212 AAARDQADVDNLFDRLQYLKDELDRNLQALKNY----------PSTIT---LRQLIDELLAIGSGEGGLPSLRRDELAAQ 278
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1191704915 536 KEKGDLELEIIVLNDRVTDLVNQQ-QTLEEKMREDRDSLVERLH 578
Cdd:COG4192 279 ATLEALAEENNSILEQLRTQISGLvGNSREQLVALNQETAQLVQ 322
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
596-757 |
4.99e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.20 E-value: 4.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 596 ASFAPMEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKILK---DEMNKEIEAARRQF 672
Cdd:COG3883 9 PTPAFADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQaeiAEAEAEIEERREEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 673 QSQLADLQQ----LPDILKITEAK-LAECQDQLQGYER---KNIDLTAIISDLRSRIEHQGDKLEMAREKHQASQKENKQ 744
Cdd:COG3883 89 GERARALYRsggsVSYLDVLLGSEsFSDFLDRLSALSKiadADADLLEELKADKAELEAKKAELEAKLAELEALKAELEA 168
|
170
....*....|...
gi 1191704915 745 lslKVDELERLEA 757
Cdd:COG3883 169 ---AKAELEAQQA 178
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
406-923 |
8.12e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 40.16 E-value: 8.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 406 QEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKnlersgnqhkAEVEAIMEQlKELKQKGDRDKESL 485
Cdd:pfam01576 5 EEMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQ----------AETELCAEA-EEMRARLAARKQEL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 486 KKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRYNQVVKEK-------GDLELEIIVLNDRVTDLVNQ 558
Cdd:pfam01576 74 EEILHELESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKvtteakiKKLEEDILLLEDQNSKLSKE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 559 QQTLEEKMREDRDSLVERlHRQTAEYSAFKLENErlkASFAPMEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRL 638
Cdd:pfam01576 154 RKLLEERISEFTSNLAEE-EEKAKSLSKLKNKHE---AMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQA 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 639 EADEVAAQLERCDKENKI----LKDEMNKEIEAAR--RQFQSQLADLQQLPDILKITEAK-------LAECQDQLQGYER 705
Cdd:pfam01576 230 QIAELRAQLAKKEEELQAalarLEEETAQKNNALKkiRELEAQISELQEDLESERAARNKaekqrrdLGEELEALKTELE 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 706 KNIDLTAIISDLRSRIE----------------HQGDKLEMAREKHQASQKENKQL------------SLKVDELERLEA 757
Cdd:pfam01576 310 DTLDTTAAQQELRSKREqevtelkkaleeetrsHEAQLQEMRQKHTQALEELTEQLeqakrnkanlekAKQALESENAEL 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 758 LGPISVLFLGPETFSHLAVfcLVCGSVEGLEA----LEGTRQTSEEKLLPFQWKLEATSA-------QNIEFLQVIAKRE 826
Cdd:pfam01576 390 QAELRTLQQAKQDSEHKRK--KLEGQLQELQArlseSERQRAELAEKLSKLQSELESVSSllneaegKNIKLSKDVSSLE 467
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 827 EAIHQSQLRLEEKTRECGTLARQLESAIEDARRQVEQTKEHALSKeRAAQNKILDLETQLSRTKTELSQLRR---SRDDA 903
Cdd:pfam01576 468 SQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAK-RNVERQLSTLQAQLSDMKKKLEEDAGtleALEEG 546
|
570 580
....*....|....*....|
gi 1191704915 904 DRRYQSRLQDLKDRLEQSES 923
Cdd:pfam01576 547 KKRLQRELEALTQQLEEKAA 566
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
332-563 |
8.95e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 40.00 E-value: 8.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 332 LTRQKELLLQKLstfEETNRTLRDLlREQHckeDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCE 411
Cdd:COG3206 180 LEEQLPELRKEL---EEAEAALEEF-RQKN---GLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSG 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 412 KAQAKTASElSKSMESMRGHLqAQLRSKEAENSRlcmqiknleRSGNQHkAEVEAIMEQLKELKQKGDRDKESLKKAIRA 491
Cdd:COG3206 253 PDALPELLQ-SPVIQQLRAQL-AELEAELAELSA---------RYTPNH-PDVIALRAQIAALRAQLQQEAQRILASLEA 320
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1191704915 492 QKERAEKSEEYAEQlhvqladkdlyvaeALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLE 563
Cdd:COG3206 321 ELEALQAREASLQA--------------QLAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEAR 378
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
548-701 |
9.07e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 39.56 E-value: 9.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704915 548 LNDRVTDLvNQQQTLEEKMREDRDSLVERLhrqTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGmid 627
Cdd:PRK09039 58 LNSQIAEL-ADLLSLERQGNQDLQDSVANL---RASLSAAEAERSRLQALLAELAGAGAAAEGRAGELAQELDSEKQ--- 130
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1191704915 628 nyksqvmktrlEADEVAAQLERcdkenkilkdeMNKEIEAARRqfqsQLADLQQLpdiLKITEAKLAECQDQLQ 701
Cdd:PRK09039 131 -----------VSARALAQVEL-----------LNQQIAALRR----QLAALEAA---LDASEKRDRESQAKIA 175
|
|
| |
