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zinc finger protein 532 isoform b [Homo sapiens]
zf-RING_7 and zf-C2H2_11 domain-containing protein( domain architecture ID 13676732)
protein containing domains PTZ00108, zf-RING_7, zf-C2H2_11, and zf-C2H2_6
List of domain hits
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Name | Accession | Description | Interval | E-value | ||||||
zf-C2H2_11 | pfam16622 | zinc-finger C2H2-type; Zinc-finger of C2H2 type found in higher eukaryotes. |
1197-1223 | 9.54e-11 | ||||||
zinc-finger C2H2-type; Zinc-finger of C2H2 type found in higher eukaryotes. : Pssm-ID: 465205 Cd Length: 27 Bit Score: 57.44 E-value: 9.54e-11
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DUF5585 super family | cl39316 | Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
308-613 | 1.39e-05 | ||||||
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. The actual alignment was detected with superfamily member pfam17823: Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 49.19 E-value: 1.39e-05
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zf-C2H2_6 | pfam13912 | C2H2-type zinc finger; |
1261-1282 | 4.80e-03 | ||||||
C2H2-type zinc finger; : Pssm-ID: 433576 Cd Length: 27 Bit Score: 35.68 E-value: 4.80e-03
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zf-RING_7 | pfam02591 | C4-type zinc ribbon domain; Zn-ribbon_9 is a Zn-ribbon domain rich in aromatic and positively ... |
784-819 | 6.91e-03 | ||||||
C4-type zinc ribbon domain; Zn-ribbon_9 is a Zn-ribbon domain rich in aromatic and positively charged amino acid residues. This C-terminal Zn-ribbon domain consists of two beta-strands acting as a scaffold for the two Zn knuckles. Both pairs of cysteines making up the two Zn knuckles are situated at highly conserved sharp beta-turns, an arrangement that facilitates the tetrahedral coordination of the divalent Zn ion. The two Zn-knuckle cysteine motifs are separated by 20 residues, 9 of which form an alpha-helix (helix 4).Structural modelling suggests this domain may bind nucleic acids. The domain appears to bind flaA-mRNA, thus contributing to flagellum formation and motility. : Pssm-ID: 426857 [Multi-domain] Cd Length: 33 Bit Score: 35.57 E-value: 6.91e-03
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Name | Accession | Description | Interval | E-value | ||||||
zf-C2H2_11 | pfam16622 | zinc-finger C2H2-type; Zinc-finger of C2H2 type found in higher eukaryotes. |
1197-1223 | 9.54e-11 | ||||||
zinc-finger C2H2-type; Zinc-finger of C2H2 type found in higher eukaryotes. Pssm-ID: 465205 Cd Length: 27 Bit Score: 57.44 E-value: 9.54e-11
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DUF5585 | pfam17823 | Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
308-613 | 1.39e-05 | ||||||
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 49.19 E-value: 1.39e-05
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zf-C2H2_6 | pfam13912 | C2H2-type zinc finger; |
1261-1282 | 4.80e-03 | ||||||
C2H2-type zinc finger; Pssm-ID: 433576 Cd Length: 27 Bit Score: 35.68 E-value: 4.80e-03
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zf-RING_7 | pfam02591 | C4-type zinc ribbon domain; Zn-ribbon_9 is a Zn-ribbon domain rich in aromatic and positively ... |
784-819 | 6.91e-03 | ||||||
C4-type zinc ribbon domain; Zn-ribbon_9 is a Zn-ribbon domain rich in aromatic and positively charged amino acid residues. This C-terminal Zn-ribbon domain consists of two beta-strands acting as a scaffold for the two Zn knuckles. Both pairs of cysteines making up the two Zn knuckles are situated at highly conserved sharp beta-turns, an arrangement that facilitates the tetrahedral coordination of the divalent Zn ion. The two Zn-knuckle cysteine motifs are separated by 20 residues, 9 of which form an alpha-helix (helix 4).Structural modelling suggests this domain may bind nucleic acids. The domain appears to bind flaA-mRNA, thus contributing to flagellum formation and motility. Pssm-ID: 426857 [Multi-domain] Cd Length: 33 Bit Score: 35.57 E-value: 6.91e-03
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Name | Accession | Description | Interval | E-value | ||||||
zf-C2H2_11 | pfam16622 | zinc-finger C2H2-type; Zinc-finger of C2H2 type found in higher eukaryotes. |
1197-1223 | 9.54e-11 | ||||||
zinc-finger C2H2-type; Zinc-finger of C2H2 type found in higher eukaryotes. Pssm-ID: 465205 Cd Length: 27 Bit Score: 57.44 E-value: 9.54e-11
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DUF5585 | pfam17823 | Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
308-613 | 1.39e-05 | ||||||
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 49.19 E-value: 1.39e-05
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zf-C2H2_6 | pfam13912 | C2H2-type zinc finger; |
1261-1282 | 4.80e-03 | ||||||
C2H2-type zinc finger; Pssm-ID: 433576 Cd Length: 27 Bit Score: 35.68 E-value: 4.80e-03
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zf-RING_7 | pfam02591 | C4-type zinc ribbon domain; Zn-ribbon_9 is a Zn-ribbon domain rich in aromatic and positively ... |
784-819 | 6.91e-03 | ||||||
C4-type zinc ribbon domain; Zn-ribbon_9 is a Zn-ribbon domain rich in aromatic and positively charged amino acid residues. This C-terminal Zn-ribbon domain consists of two beta-strands acting as a scaffold for the two Zn knuckles. Both pairs of cysteines making up the two Zn knuckles are situated at highly conserved sharp beta-turns, an arrangement that facilitates the tetrahedral coordination of the divalent Zn ion. The two Zn-knuckle cysteine motifs are separated by 20 residues, 9 of which form an alpha-helix (helix 4).Structural modelling suggests this domain may bind nucleic acids. The domain appears to bind flaA-mRNA, thus contributing to flagellum formation and motility. Pssm-ID: 426857 [Multi-domain] Cd Length: 33 Bit Score: 35.57 E-value: 6.91e-03
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Blast search parameters | ||||
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