|
Name |
Accession |
Description |
Interval |
E-value |
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
100-412 |
7.49e-09 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 57.83 E-value: 7.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 100 VSNSQLRQKISSLET-KLKASEEEK----QRIKKDVESLMEKHSVLEKGFLKEKEQDAVSFQaRYREL----QEKHKQEL 170
Cdd:pfam17380 284 VSERQQQEKFEKMEQeRLRQEKEEKarevERRRKLEEAEKARQAEMDRQAAIYAEQERMAME-RERELerirQEERKREL 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 171 EDMRKaghEALSIIVDEYKALLQSSVKQQldaiEKQYVSAIEKQAHRCEELLHAQHQRLLDVLDTEKELLREKIQEALTQ 250
Cdd:pfam17380 363 ERIRQ---EEIAMEISRMRELERLQMERQ----QKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQR 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 251 QSQ----EQKESLEKCLQEEMQRNKEtlesaVKLEKEAMKDVITKAVGEERENLEKVHAEE-------RELWKTEHAR-D 318
Cdd:pfam17380 436 EVRrleeERAREMERVRLEEQERQQQ-----VERLRQQEEERKRKKLELEKEKRDRKRAEEqrrkileKELEERKQAMiE 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 319 QERVAEAIQAAVQEQQRMSQEAVKAAIVEEQRRSEKAMEEAvKRTRDELVEYVREQRRLDQVTRQRSLSSLELFLSCAQK 398
Cdd:pfam17380 511 EERKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEER-RRIQEQMRKATEERSRLEAMEREREMMRQIVESEKARA 589
|
330
....*....|....
gi 1246417685 399 QLSAliATEPVDIE 412
Cdd:pfam17380 590 EYEA--TTPITTIK 601
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
145-384 |
1.49e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.87 E-value: 1.49e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 145 LKEKEQDAVSFQARYRELQEKHKQELEDMRKAGHEALSIIVDEYKALLQSSVKQQLDAIEKQYVSAIEKQAHRCEELLHA 224
Cdd:COG1196 234 LRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRE 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 225 QHQRLLDVLDTEKELLREKIQEALTQQSQEQKESLEKCLQEEMQRNKETLESAVKLEKEAMKDVITKAVGEERENLEKVH 304
Cdd:COG1196 314 LEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALR 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 305 AEERELWKTEHARDQERVAEAIQAAVQEQQRMSQEAVKAAIVEEQRRSEKAMEEAVKRTRDELVEYVREQRRLDQVTRQR 384
Cdd:COG1196 394 AAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA 473
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
103-384 |
1.99e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.07 E-value: 1.99e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 103 SQLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLeKGFLKEKEQDAVSFQaRYRELQEKHKQELEDMRKAGHEALS 182
Cdd:TIGR02169 698 RRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKL-KERLEELEEDLSSLE-QEIENVKSELKELEARIEELEEDLH 775
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 183 IIVDEYKALLQSSVKQQLDAIEKQYvSAIEKQAHRCEELLHAQHQRLLDvLDTEKELLREKIQEALTQQS--QEQKESLE 260
Cdd:TIGR02169 776 KLEEALNDLEARLSHSRIPEIQAEL-SKLEEEVSRIEARLREIEQKLNR-LTLEKEYLEKEIQELQEQRIdlKEQIKSIE 853
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 261 KcLQEEMQRNKETLESAVKLEKEAMKDVITKAVGEEREnLEKVHAEERELwktehardQERVAEAIQAAVQEQQRMSQEA 340
Cdd:TIGR02169 854 K-EIENLNGKKEELEEELEELEAALRDLESRLGDLKKE-RDELEAQLREL--------ERKIEELEAQIEKKRKRLSELK 923
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1246417685 341 VKAAIVEEQrrsEKAMEEAVKrtrdELVEYVREQRRLDQVTRQR 384
Cdd:TIGR02169 924 AKLEALEEE---LSEIEDPKG----EDEEIPEEELSLEDVQAEL 960
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
113-383 |
2.46e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.67 E-value: 2.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 113 ETKLKASEEEKQRIKKDVESLMEKHSVLEKGFLKEKEQDAVSFQARYRELQEKHKQELEDMRKAGHEALSIIVDEYKA-- 190
Cdd:PTZ00121 1435 EAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKAde 1514
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 191 LLQSSVKQQLDAIEKQyvsaieKQAHRCEELLHAQHQRLLDVLDTEKELLR--EKIQEALTQQSQEQKESLEKCLQEEMQ 268
Cdd:PTZ00121 1515 AKKAEEAKKADEAKKA------EEAKKADEAKKAEEKKKADELKKAEELKKaeEKKKAEEAKKAEEDKNMALRKAEEAKK 1588
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 269 RNKETLESAVKL--EKEAMKDVITKAVGEERENLEKVHAEERELWKTEHARDQE----RVAEAIQAAVQEQQ-RMSQEAV 341
Cdd:PTZ00121 1589 AEEARIEEVMKLyeEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEaeekKKAEELKKAEEENKiKAAEEAK 1668
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1246417685 342 KAAivEEQRRSEKAM--EEAVKRTRDELVEYVREQRRLDQVTRQ 383
Cdd:PTZ00121 1669 KAE--EDKKKAEEAKkaEEDEKKAAEALKKEAEEAKKAEELKKK 1710
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
100-412 |
7.49e-09 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 57.83 E-value: 7.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 100 VSNSQLRQKISSLET-KLKASEEEK----QRIKKDVESLMEKHSVLEKGFLKEKEQDAVSFQaRYREL----QEKHKQEL 170
Cdd:pfam17380 284 VSERQQQEKFEKMEQeRLRQEKEEKarevERRRKLEEAEKARQAEMDRQAAIYAEQERMAME-RERELerirQEERKREL 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 171 EDMRKaghEALSIIVDEYKALLQSSVKQQldaiEKQYVSAIEKQAHRCEELLHAQHQRLLDVLDTEKELLREKIQEALTQ 250
Cdd:pfam17380 363 ERIRQ---EEIAMEISRMRELERLQMERQ----QKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQR 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 251 QSQ----EQKESLEKCLQEEMQRNKEtlesaVKLEKEAMKDVITKAVGEERENLEKVHAEE-------RELWKTEHAR-D 318
Cdd:pfam17380 436 EVRrleeERAREMERVRLEEQERQQQ-----VERLRQQEEERKRKKLELEKEKRDRKRAEEqrrkileKELEERKQAMiE 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 319 QERVAEAIQAAVQEQQRMSQEAVKAAIVEEQRRSEKAMEEAvKRTRDELVEYVREQRRLDQVTRQRSLSSLELFLSCAQK 398
Cdd:pfam17380 511 EERKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEER-RRIQEQMRKATEERSRLEAMEREREMMRQIVESEKARA 589
|
330
....*....|....
gi 1246417685 399 QLSAliATEPVDIE 412
Cdd:pfam17380 590 EYEA--TTPITTIK 601
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
145-384 |
1.49e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.87 E-value: 1.49e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 145 LKEKEQDAVSFQARYRELQEKHKQELEDMRKAGHEALSIIVDEYKALLQSSVKQQLDAIEKQYVSAIEKQAHRCEELLHA 224
Cdd:COG1196 234 LRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRE 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 225 QHQRLLDVLDTEKELLREKIQEALTQQSQEQKESLEKCLQEEMQRNKETLESAVKLEKEAMKDVITKAVGEERENLEKVH 304
Cdd:COG1196 314 LEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALR 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 305 AEERELWKTEHARDQERVAEAIQAAVQEQQRMSQEAVKAAIVEEQRRSEKAMEEAVKRTRDELVEYVREQRRLDQVTRQR 384
Cdd:COG1196 394 AAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA 473
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
104-366 |
4.49e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 55.33 E-value: 4.49e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 104 QLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEKGfLKEKEQDAVSFQARYRELQEKHKQELEDMRKAGHEALSI 183
Cdd:COG1196 257 ELEAELAELEAELEELRLELEELELELEEAQAEEYELLAE-LARLEQDIARLEERRRELEERLEELEEELAELEEELEEL 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 184 IVDEYKALLQSSVKQQLDAIEKQYVSAIEKQAHRCEELLHAQHQRLLDVLDTEKELLREKIQEALTQQSQEQKESLEKCL 263
Cdd:COG1196 336 EEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLER 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 264 QEEMQRNKETLESAvKLEKEAMKDVITKAVGEERENLEKVHAEERELwKTEHARDQERVAEAIQAAVQEQQRMSQEAVKA 343
Cdd:COG1196 416 LERLEEELEELEEA-LAELEEEEEEEEEALEEAAEEEAELEEEEEAL-LELLAELLEEAALLEAALAELLEELAEAAARL 493
|
250 260
....*....|....*....|...
gi 1246417685 344 AIVEEQRRSEKAMEEAVKRTRDE 366
Cdd:COG1196 494 LLLLEAEADYEGFLEGVKAALLL 516
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
103-384 |
1.99e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.07 E-value: 1.99e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 103 SQLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLeKGFLKEKEQDAVSFQaRYRELQEKHKQELEDMRKAGHEALS 182
Cdd:TIGR02169 698 RRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKL-KERLEELEEDLSSLE-QEIENVKSELKELEARIEELEEDLH 775
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 183 IIVDEYKALLQSSVKQQLDAIEKQYvSAIEKQAHRCEELLHAQHQRLLDvLDTEKELLREKIQEALTQQS--QEQKESLE 260
Cdd:TIGR02169 776 KLEEALNDLEARLSHSRIPEIQAEL-SKLEEEVSRIEARLREIEQKLNR-LTLEKEYLEKEIQELQEQRIdlKEQIKSIE 853
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 261 KcLQEEMQRNKETLESAVKLEKEAMKDVITKAVGEEREnLEKVHAEERELwktehardQERVAEAIQAAVQEQQRMSQEA 340
Cdd:TIGR02169 854 K-EIENLNGKKEELEEELEELEAALRDLESRLGDLKKE-RDELEAQLREL--------ERKIEELEAQIEKKRKRLSELK 923
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1246417685 341 VKAAIVEEQrrsEKAMEEAVKrtrdELVEYVREQRRLDQVTRQR 384
Cdd:TIGR02169 924 AKLEALEEE---LSEIEDPKG----EDEEIPEEELSLEDVQAEL 960
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
104-376 |
5.70e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 48.78 E-value: 5.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 104 QLRQKISSLETKLKASEEEKQRIKKDVESLmEKHSVLEKGFLKEKEQDAVSFQARYRELQEKHKQELEDMRkaghealsi 183
Cdd:COG1196 236 ELEAELEELEAELEELEAELEELEAELAEL-EAELEELRLELEELELELEEAQAEEYELLAELARLEQDIA--------- 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 184 ivdeYKALLQSSVKQQLDAIEKQYVSAIEKQAHRCEELLHAQHQrlLDVLDTEKELLREKIQEALTQQSQEQKESLEKcl 263
Cdd:COG1196 306 ----RLEERRRELEERLEELEEELAELEEELEELEEELEELEEE--LEEAEEELEEAEAELAEAEEALLEAEAELAEA-- 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 264 QEEMQRNKETLESAVKLEKEAMKDVITKAVGEERENLEKVHAEERELWKTEHARDQERVAEAIQAAVQEQQRMSQEAVKA 343
Cdd:COG1196 378 EEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEE 457
|
250 260 270
....*....|....*....|....*....|...
gi 1246417685 344 AIVEEQRRSEKAMEEAVKRTRDELVEYVREQRR 376
Cdd:COG1196 458 EEALLELLAELLEEAALLEAALAELLEELAEAA 490
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
113-383 |
2.46e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.67 E-value: 2.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 113 ETKLKASEEEKQRIKKDVESLMEKHSVLEKGFLKEKEQDAVSFQARYRELQEKHKQELEDMRKAGHEALSIIVDEYKA-- 190
Cdd:PTZ00121 1435 EAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKAde 1514
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 191 LLQSSVKQQLDAIEKQyvsaieKQAHRCEELLHAQHQRLLDVLDTEKELLR--EKIQEALTQQSQEQKESLEKCLQEEMQ 268
Cdd:PTZ00121 1515 AKKAEEAKKADEAKKA------EEAKKADEAKKAEEKKKADELKKAEELKKaeEKKKAEEAKKAEEDKNMALRKAEEAKK 1588
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 269 RNKETLESAVKL--EKEAMKDVITKAVGEERENLEKVHAEERELWKTEHARDQE----RVAEAIQAAVQEQQ-RMSQEAV 341
Cdd:PTZ00121 1589 AEEARIEEVMKLyeEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEaeekKKAEELKKAEEENKiKAAEEAK 1668
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1246417685 342 KAAivEEQRRSEKAM--EEAVKRTRDELVEYVREQRRLDQVTRQ 383
Cdd:PTZ00121 1669 KAE--EDKKKAEEAKkaEEDEKKAAEALKKEAEEAKKAEELKKK 1710
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
103-344 |
4.38e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 4.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 103 SQLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEKgFLKEKEQDAVSFQARYRELQEKHKQELEDMRKAGHEALS 182
Cdd:COG4942 30 EQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALAR-RIRALEQELAALEAELAELEKEIAELRAELEAQKEELAE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 183 IIVDEYKALLQSSVKQQLDAiekQYVSAIEKQAHRCEELLHAQHQRLLDVLDTEKELlrekiqEALTQQSQEQKESLEKc 262
Cdd:COG4942 109 LLRALYRLGRQPPLALLLSP---EDFLDAVRRLQYLKYLAPARREQAEELRADLAEL------AALRAELEAERAELEA- 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 263 LQEEMQRNKETLESAVKlEKEAMKDVITKAVGEERENLEKVHAEERELwktehardQERVAEAIQAAVQEQQRMSQEAVK 342
Cdd:COG4942 179 LLAELEEERAALEALKA-ERQKLLARLEKELAELAAELAELQQEAEEL--------EALIARLEAEAAAAAERTPAAGFA 249
|
..
gi 1246417685 343 AA 344
Cdd:COG4942 250 AL 251
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
104-340 |
1.71e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 44.06 E-value: 1.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 104 QLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEKGFLKEKEQDAV---SFQARYRELQEKHKQELEDMRK--AGH 178
Cdd:pfam12128 298 QWKEKRDELNGELSAADAAVAKDRSELEALEDQHGAFLDADIETAAADQEqlpSWQSELENLEERLKALTGKHQDvtAKY 377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 179 EALSIIVDEYKALLQSSVKQQLDAIEKqyvsAIEKQAHRCEELLHAQHQRLldvldtekellREKIQEALTQQSQEQKES 258
Cdd:pfam12128 378 NRRRSKIKEQNNRDIAGIKDKLAKIRE----ARDRQLAVAEDDLQALESEL-----------REQLEAGKLEFNEEEYRL 442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 259 LEKCLQEEMQRNKETLESAVKLEKEAMKDVITKAVGEERENLEKVHAEERELWKTEHARDQERVA-EAIQAAVQEQQRMS 337
Cdd:pfam12128 443 KSRLGELKLRLNQATATPELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEAlRQASRRLEERQSAL 522
|
...
gi 1246417685 338 QEA 340
Cdd:pfam12128 523 DEL 525
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
103-362 |
2.53e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 43.39 E-value: 2.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 103 SQLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEKGfLKEKEQDAVSFQARYRELQEKHKQELEDMRKAGHEALS 182
Cdd:COG1196 298 ARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEE-LEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAE 376
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 183 IIVDEYKALLQSSVKQQLDAIEKQYVSAIEKQAHRCEELLHAQHQRLLDVLDTEKELLRE---------KIQEALTQQSQ 253
Cdd:COG1196 377 AEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEeeeeeealeEAAEEEAELEE 456
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 254 EQKESLEKCLQEEMQRNKETLESAVKLEKEAMKdvitKAVGEERENLEKVHAEERELWKTEHARD-QERVAEAIQAAVQE 332
Cdd:COG1196 457 EEEALLELLAELLEEAALLEAALAELLEELAEA----AARLLLLLEAEADYEGFLEGVKAALLLAgLRGLAGAVAVLIGV 532
|
250 260 270
....*....|....*....|....*....|
gi 1246417685 333 QQRMSQEAVKAAIVEEQRRSEKAMEEAVKR 362
Cdd:COG1196 533 EAAYEAALEAALAAALQNIVVEDDEVAAAA 562
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
151-384 |
6.26e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 41.98 E-value: 6.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 151 DAVSFQARYRELQEKHKQELEDMRKAgHEALSIIVDEykallqssVKQQLDAIEKQYVSAIEKQAHRCEELLHAQHQRLL 230
Cdd:TIGR02169 160 DEIAGVAEFDRKKEKALEELEEVEEN-IERLDLIIDE--------KRQQLERLRREREKAERYQALLKEKREYEGYELLK 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 231 DVLDTEKELlrekiqEALTQQSQEQKESLEKcLQEEMQRNKETLESAVKLEKEAMKDVITKAVGEE---RENLEKVHAEE 307
Cdd:TIGR02169 231 EKEALERQK------EAIERQLASLEEELEK-LTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQlrvKEKIGELEAEI 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 308 RELWKT--EHARDQERVAEAIQAAVQE--QQRMSQEAVKAAIVEEQRRSEKAMEE--------------------AVKRT 363
Cdd:TIGR02169 304 ASLERSiaEKERELEDAEERLAKLEAEidKLLAEIEELEREIEEERKRRDKLTEEyaelkeeledlraeleevdkEFAET 383
|
250 260
....*....|....*....|.
gi 1246417685 364 RDELVEYvreQRRLDQVTRQR 384
Cdd:TIGR02169 384 RDELKDY---REKLEKLKREI 401
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
113-379 |
7.65e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.05 E-value: 7.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 113 ETKLKASEEEK--QRIKKDVESLMEK-HSVLEKGFLKEKEQDAVSFQARYRELQEKHKQELEDMRKAGHEALSIIVDEYK 189
Cdd:PTZ00121 1312 EEAKKADEAKKkaEEAKKKADAAKKKaEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKK 1391
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 190 ALLQSSVKQQLDAIEKQYVSAIEKQAHRCEELLH-AQHQRLLDVLDTEKEllREKIQEALTQQSQEQKESLEKCLQEEMQ 268
Cdd:PTZ00121 1392 KADEAKKKAEEDKKKADELKKAAAAKKKADEAKKkAEEKKKADEAKKKAE--EAKKADEAKKKAEEAKKAEEAKKKAEEA 1469
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 269 RNKETLESavKLEKEAMKDVITKAVGEERENLEKVHAEERELWKTEHARDQERVAEAIQAAVQEQQRMSQEAVKAaivEE 348
Cdd:PTZ00121 1470 KKADEAKK--KAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKA---EE 1544
|
250 260 270
....*....|....*....|....*....|.
gi 1246417685 349 QRRSEKaMEEAVKRTRDELVEYVREQRRLDQ 379
Cdd:PTZ00121 1545 KKKADE-LKKAEELKKAEEKKKAEEAKKAEE 1574
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
101-310 |
7.83e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 41.54 E-value: 7.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 101 SNSQLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEKGflkekeqdavsfQARYRELQEKHKQELEDMRKAGHeA 180
Cdd:TIGR04523 385 EIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKE------------IERLKETIIKNNSEIKDLTNQDS-V 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 181 LSIIVDEYKAlLQSSVKQQLDAIEKQYVSAIEKQAHRCEELlhAQHQRLLDVLDTEKELLREKIQEaLTQQSQEQKESLE 260
Cdd:TIGR04523 452 KELIIKNLDN-TRESLETQLKVLSRSINKIKQNLEQKQKEL--KSKEKELKKLNEEKKELEEKVKD-LTKKISSLKEKIE 527
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1246417685 261 KCLQEEMQRNKETLESAVKLEK---EAMKDVITKAVGEERENLEKVHAEEREL 310
Cdd:TIGR04523 528 KLESEKKEKESKISDLEDELNKddfELKKENLEKEIDEKNKEIEELKQTQKSL 580
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
104-279 |
1.81e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 40.81 E-value: 1.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 104 QLRQKISSLETKLKASEEEKQRIKKDVESLMEKhsvlekgfLKEKEQDAVSFQARYRELQEKHKQELEDMRKAGHEALSI 183
Cdd:TIGR02168 327 ELESKLDELAEELAELEEKLEELKEELESLEAE--------LEELEAELEELESRLEELEEQLETLRSKVAQLELQIASL 398
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 184 -----IVDEYKALLQSSVKQQLDAIEKQYVSAIEKQAHRCE----------ELLHAQHQRLLDVLDTEKELLREKIQEAL 248
Cdd:TIGR02168 399 nneieRLEARLERLEDRRERLQQEIEELLKKLEEAELKELQaeleeleeelEELQEELERLEEALEELREELEEAEQALD 478
|
170 180 190
....*....|....*....|....*....|.
gi 1246417685 249 TQQSQEQKESLEKCLQEEMQRNKETLESAVK 279
Cdd:TIGR02168 479 AAERELAQLQARLDSLERLQENLEGFSEGVK 509
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
103-344 |
2.12e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.20 E-value: 2.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 103 SQLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEKGfLKEKEQDAVSFQARYRELQEKHKQELEDMRKagheals 182
Cdd:COG3883 19 QAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAE-LEALQAEIDKLQAEIAEAEAEIEERREELGE------- 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 183 IIVDEYKALLQSSVKQQL-------DAIEKqyVSAIEKqahrceelLHAQHQRLLDVLDTEKELLREKIQEAltqqsQEQ 255
Cdd:COG3883 91 RARALYRSGGSVSYLDVLlgsesfsDFLDR--LSALSK--------IADADADLLEELKADKAELEAKKAEL-----EAK 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 256 KESLEKcLQEEMQRNKETLESAVKlEKEAMKDVITKAVGEERENLEKVHAEERELWKTEHARDQERVAEAIQAAVQEQQR 335
Cdd:COG3883 156 LAELEA-LKAELEAAKAELEAQQA-EQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAA 233
|
....*....
gi 1246417685 336 MSQEAVKAA 344
Cdd:COG3883 234 AAAAAAAAA 242
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
106-277 |
2.69e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.28 E-value: 2.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 106 RQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEKGF--------LKEKEQDAVSFQARYRELQekhkQELEDMRKAG 177
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELDALQERRealqrlaeYSWDEIDVASAEREIAELE----AELERLDASS 684
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 178 HE--ALSIIVDEYKALLQSSVKQQLDAIEKQyvSAIEKQAHRCEELLHAQHQRLLDVLDTEKELLREKIQEALTQQSQEQ 255
Cdd:COG4913 685 DDlaALEEQLEELEAELEELEEELDELKGEI--GRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDA 762
|
170 180
....*....|....*....|...
gi 1246417685 256 KES-LEKCLQEEMQRNKETLESA 277
Cdd:COG4913 763 VEReLRENLEERIDALRARLNRA 785
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
113-378 |
3.22e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 40.12 E-value: 3.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 113 ETKLKASEEEKQRIKKDVESLmEKHSVLEKGFLKEKEQDAVSFQARyRELQEKHKQELEDMRKAGHEALSIIVDEYKALL 192
Cdd:PTZ00121 1531 EEAKKADEAKKAEEKKKADEL-KKAEELKKAEEKKKAEEAKKAEED-KNMALRKAEEAKKAEEARIEEVMKLYEEEKKMK 1608
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 193 QSSVKQQLDA-IEKQYVSAIEKQAHRCEELLHAQHQRLLDVLDTEKELLREKIQEA-LTQQSQEQKESLEKCLQEEMQRN 270
Cdd:PTZ00121 1609 AEEAKKAEEAkIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAeEAKKAEEDKKKAEEAKKAEEDEK 1688
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 271 KETLESAVKLEKEAMKDVITKAVGEERENLEKVH-AEERELWKTEHARDQE----RVAEAIQAAVQEQQRMSQ-EAVKAA 344
Cdd:PTZ00121 1689 KAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKkAEEENKIKAEEAKKEAeedkKKAEEAKKDEEEKKKIAHlKKEEEK 1768
|
250 260 270
....*....|....*....|....*....|....
gi 1246417685 345 IVEEQRRSEKAMEEAVKRTRDELVEYVREQRRLD 378
Cdd:PTZ00121 1769 KAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKD 1802
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
113-399 |
3.45e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 39.74 E-value: 3.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 113 ETKLKASEEEK-QRIKKDVESLMEKHSVLEKGFLKEKEQDAVSFQARYRELQEKHKQELEDMRKAghEALSIIVDEYK-- 189
Cdd:PTZ00121 1382 AAKKKAEEKKKaDEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKA--DEAKKKAEEAKka 1459
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 190 --ALLQSSVKQQLD-----AIEKQYVSAIEKQAHRCEELLHAQHQRLLDVLDTEKELLREKIQEALTQQSQEQKESLEKC 262
Cdd:PTZ00121 1460 eeAKKKAEEAKKADeakkkAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEA 1539
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 263 LQEEMQRNKETLESAVKLEK-EAMKDVITKAVGEERENLEKVHAEerELWKTEHARDQErvaeaIQAAVQEQQRMSQEAV 341
Cdd:PTZ00121 1540 KKAEEKKKADELKKAEELKKaEEKKKAEEAKKAEEDKNMALRKAE--EAKKAEEARIEE-----VMKLYEEEKKMKAEEA 1612
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1246417685 342 KAAIVEEQRRSEKAMEEAVKRTRDELVEYVREQRRLDQVTRQRSLSSLELFLSCAQKQ 399
Cdd:PTZ00121 1613 KKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKA 1670
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
113-374 |
4.62e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 39.35 E-value: 4.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 113 ETKLKASEEEKQRIKKDVESLMEKHSVLEKGFLKEKEQDAVSFQARYRELQEK--HKQELEDMRKAGHealsiivDEYKA 190
Cdd:PTZ00121 1507 EAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKaeEKKKAEEAKKAEE-------DKNMA 1579
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 191 LLQSSVKQQLDA--IEKQYVSAIEKQAHRCEELLHAQHQRLlDVLDTEKELLREKIQEALTQQSQEQKESLEKCLQEEMQ 268
Cdd:PTZ00121 1580 LRKAEEAKKAEEarIEEVMKLYEEEKKMKAEEAKKAEEAKI-KAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEE 1658
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 269 RNKETLESAVKLEKEAMK-DVITKAVGEERENLEKVHAEERELWKTEHARDQE----RVAEAIQAAVQEQQRMSQEAVKa 343
Cdd:PTZ00121 1659 NKIKAAEEAKKAEEDKKKaEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEaeekKKAEELKKAEEENKIKAEEAKK- 1737
|
250 260 270
....*....|....*....|....*....|.
gi 1246417685 344 aivEEQRRSEKAMEEAVKRTRDELVEYVREQ 374
Cdd:PTZ00121 1738 ---EAEEDKKKAEEAKKDEEEKKKIAHLKKE 1765
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
83-277 |
7.98e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 38.78 E-value: 7.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 83 SHGALALEDEPEgpgvhVSNSQLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEKGFLKEKEQDAVSFQARYREL 162
Cdd:PRK04863 825 SHLAVAFEADPE-----AELRQLNRRRVELERALADHESQEQQQRSQLEQAKEGLSALNRLLPRLNLLADETLADRVEEI 899
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417685 163 QEKHKQELEDMRK-AGHEALSIIVDEYKALLQSSvKQQLDAIEKQYVSAIEKQA-------------HRCEELLHAQHQR 228
Cdd:PRK04863 900 REQLDEAEEAKRFvQQHGNALAQLEPIVSVLQSD-PEQFEQLKQDYQQAQQTQRdakqqafaltevvQRRAHFSYEDAAE 978
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1246417685 229 LLDVLDTEKELLREKiQEALTQQSQEQKESLeKCLQEEMQRNKETLESA 277
Cdd:PRK04863 979 MLAKNSDLNEKLRQR-LEQAEQERTRAREQL-RQAQAQLAQYNQVLASL 1025
|
|
| |
