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Conserved domains on  [gi|1358101506|ref|NP_001348163|]
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granulin a isoform 1 precursor [Danio rerio]

Protein Classification

Granulin domain-containing protein( domain architecture ID 10449572)

Granulin domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Granulin pfam00396
Granulin;
475-516 6.62e-13

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 6.62e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  475 TCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSCE 516
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
651-692 6.62e-13

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 6.62e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  651 TCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSCE 692
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
302-343 6.62e-13

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 6.62e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  302 TCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSCE 343
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
563-603 7.23e-13

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 7.23e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 1358101506  563 TCCKDKDGEWGCCPLPEAVCCEDFIHCCPHGKKCNVAAGSC 603
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
Granulin pfam00396
Granulin;
739-779 1.19e-12

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.01  E-value: 1.19e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 1358101506  739 TCCKDKDGDWGCCPLPEAVCCEDFIHCCPHGKKCNVAAGSC 779
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
Granulin pfam00396
Granulin;
183-224 5.41e-12

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 61.09  E-value: 5.41e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  183 TCCQADDGQWGCCPMPKAVCCDDKIHCCPEDTVCDVKALKCV 224
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
819-860 1.49e-11

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 59.93  E-value: 1.49e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  819 TCCKNIAGEWGCCPFSQAVCCTDGEHCCPAHYKCNLSSVSCI 860
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
900-941 1.57e-11

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 59.93  E-value: 1.57e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  900 TCCLLSKDETGCCPFPEAVCCPDQKHCCPEGYRCDLRRRSCV 941
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
390-431 2.19e-11

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 59.55  E-value: 2.19e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  390 TCCKTKEGDWACCPLPEAVCCEDFVHCCPKGKKCNIAAMKCE 431
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
983-1023 2.33e-10

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 56.47  E-value: 2.33e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  983 TCCLTSQTTWGCCPSPKAVCCDDMQHCCPAGYKCGP-GGTCI 1023
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLdGGTCL 42
Granulin pfam00396
Granulin;
30-70 5.08e-09

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 52.61  E-value: 5.08e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 1358101506   30 SCCQDPTGGFSCCPFHHGECCEDHLHCCPEGMLCSVKDLTC 70
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
Granulin pfam00396
Granulin;
121-160 2.74e-07

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 47.99  E-value: 2.74e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 1358101506  121 CLLMSTSYGCCPVAQGLACSDGKHCCPNDHECSTDSSLCV 160
Cdd:pfam00396    3 CKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
 
Name Accession Description Interval E-value
Granulin pfam00396
Granulin;
475-516 6.62e-13

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 6.62e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  475 TCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSCE 516
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
651-692 6.62e-13

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 6.62e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  651 TCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSCE 692
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
302-343 6.62e-13

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 6.62e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  302 TCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSCE 343
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
563-603 7.23e-13

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 7.23e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 1358101506  563 TCCKDKDGEWGCCPLPEAVCCEDFIHCCPHGKKCNVAAGSC 603
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
Granulin pfam00396
Granulin;
739-779 1.19e-12

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.01  E-value: 1.19e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 1358101506  739 TCCKDKDGDWGCCPLPEAVCCEDFIHCCPHGKKCNVAAGSC 779
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
Granulin pfam00396
Granulin;
183-224 5.41e-12

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 61.09  E-value: 5.41e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  183 TCCQADDGQWGCCPMPKAVCCDDKIHCCPEDTVCDVKALKCV 224
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
819-860 1.49e-11

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 59.93  E-value: 1.49e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  819 TCCKNIAGEWGCCPFSQAVCCTDGEHCCPAHYKCNLSSVSCI 860
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
900-941 1.57e-11

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 59.93  E-value: 1.57e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  900 TCCLLSKDETGCCPFPEAVCCPDQKHCCPEGYRCDLRRRSCV 941
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
390-431 2.19e-11

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 59.55  E-value: 2.19e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  390 TCCKTKEGDWACCPLPEAVCCEDFVHCCPKGKKCNIAAMKCE 431
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
GRAN smart00277
Granulin;
558-603 4.28e-11

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 58.88  E-value: 4.28e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 1358101506   558 CPDGSTCCKDKDGEWGCCPLPEAVCCEDFIHCCPHGKKCNVAAGSC 603
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
734-779 4.40e-11

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 58.88  E-value: 4.40e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 1358101506   734 CPDGSTCCKDKDGDWGCCPLPEAVCCEDFIHCCPHGKKCNVAAGSC 779
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
297-342 5.79e-11

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 58.49  E-value: 5.79e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 1358101506   297 CPDGSTCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSC 342
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
470-515 5.79e-11

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 58.49  E-value: 5.79e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 1358101506   470 CPDGSTCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSC 515
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
646-691 5.79e-11

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 58.49  E-value: 5.79e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 1358101506   646 CPDGSTCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSC 691
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
176-223 1.75e-10

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 56.95  E-value: 1.75e-10
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*...
gi 1358101506   176 SECPADTTCCQADDGQWGCCPMPKAVCCDDKIHCCPEDTVCDVKALKC 223
Cdd:smart00277    4 TSCPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
Granulin pfam00396
Granulin;
983-1023 2.33e-10

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 56.47  E-value: 2.33e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  983 TCCLTSQTTWGCCPSPKAVCCDDMQHCCPAGYKCGP-GGTCI 1023
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLdGGTCL 42
GRAN smart00277
Granulin;
975-1022 6.94e-10

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 55.41  E-value: 6.94e-10
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*....
gi 1358101506   975 GFSCHDGETCCLTSQTTWGCCPSPKAVCCDDMQHCCPAGYKCGP-GGTC 1022
Cdd:smart00277    3 ETSCPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTdGGTC 51
GRAN smart00277
Granulin;
890-940 1.92e-09

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 54.26  E-value: 1.92e-09
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|.
gi 1358101506   890 DEQSSCSADSTCCLLSKDETGCCPFPEAVCCPDQKHCCPEGYRCDLRRRSC 940
Cdd:smart00277    1 DSETSCPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
Granulin pfam00396
Granulin;
30-70 5.08e-09

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 52.61  E-value: 5.08e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 1358101506   30 SCCQDPTGGFSCCPFHHGECCEDHLHCCPEGMLCSVKDLTC 70
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
GRAN smart00277
Granulin;
814-859 6.99e-09

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 52.72  E-value: 6.99e-09
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 1358101506   814 CPESSTCCKNIAGEWGCCPFSQAVCCTDGEHCCPAHYKCNLSSVSC 859
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
385-430 9.38e-09

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 52.33  E-value: 9.38e-09
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 1358101506   385 CADGTTCCKTKEGDWACCPLPEAVCCEDFVHCCPKGKKCNIAAMKC 430
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
Granulin pfam00396
Granulin;
121-160 2.74e-07

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 47.99  E-value: 2.74e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 1358101506  121 CLLMSTSYGCCPVAQGLACSDGKHCCPNDHECSTDSSLCV 160
Cdd:pfam00396    3 CKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
GRAN smart00277
Granulin;
25-70 2.34e-06

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 45.40  E-value: 2.34e-06
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 1358101506    25 CEAGQSCCQDPTGGFSCCPFHHGECCEDHLHCCPEGMLCSVKDLTC 70
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
108-159 1.89e-05

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 43.09  E-value: 1.89e-05
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|..
gi 1358101506   108 TCPDGSSCpaefsCLLMSTSYGCCPVAQGLACSDGKHCCPNDHECSTDSSLC 159
Cdd:smart00277    5 SCPDGTTC-----CLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
 
Name Accession Description Interval E-value
Granulin pfam00396
Granulin;
475-516 6.62e-13

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 6.62e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  475 TCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSCE 516
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
651-692 6.62e-13

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 6.62e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  651 TCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSCE 692
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
302-343 6.62e-13

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 6.62e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  302 TCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSCE 343
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
563-603 7.23e-13

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 7.23e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 1358101506  563 TCCKDKDGEWGCCPLPEAVCCEDFIHCCPHGKKCNVAAGSC 603
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
Granulin pfam00396
Granulin;
739-779 1.19e-12

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.01  E-value: 1.19e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 1358101506  739 TCCKDKDGDWGCCPLPEAVCCEDFIHCCPHGKKCNVAAGSC 779
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
Granulin pfam00396
Granulin;
183-224 5.41e-12

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 61.09  E-value: 5.41e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  183 TCCQADDGQWGCCPMPKAVCCDDKIHCCPEDTVCDVKALKCV 224
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
819-860 1.49e-11

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 59.93  E-value: 1.49e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  819 TCCKNIAGEWGCCPFSQAVCCTDGEHCCPAHYKCNLSSVSCI 860
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
900-941 1.57e-11

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 59.93  E-value: 1.57e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  900 TCCLLSKDETGCCPFPEAVCCPDQKHCCPEGYRCDLRRRSCV 941
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
390-431 2.19e-11

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 59.55  E-value: 2.19e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  390 TCCKTKEGDWACCPLPEAVCCEDFVHCCPKGKKCNIAAMKCE 431
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
GRAN smart00277
Granulin;
558-603 4.28e-11

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 58.88  E-value: 4.28e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 1358101506   558 CPDGSTCCKDKDGEWGCCPLPEAVCCEDFIHCCPHGKKCNVAAGSC 603
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
734-779 4.40e-11

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 58.88  E-value: 4.40e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 1358101506   734 CPDGSTCCKDKDGDWGCCPLPEAVCCEDFIHCCPHGKKCNVAAGSC 779
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
297-342 5.79e-11

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 58.49  E-value: 5.79e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 1358101506   297 CPDGSTCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSC 342
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
470-515 5.79e-11

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 58.49  E-value: 5.79e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 1358101506   470 CPDGSTCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSC 515
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
646-691 5.79e-11

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 58.49  E-value: 5.79e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 1358101506   646 CPDGSTCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSC 691
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
176-223 1.75e-10

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 56.95  E-value: 1.75e-10
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*...
gi 1358101506   176 SECPADTTCCQADDGQWGCCPMPKAVCCDDKIHCCPEDTVCDVKALKC 223
Cdd:smart00277    4 TSCPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
Granulin pfam00396
Granulin;
983-1023 2.33e-10

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 56.47  E-value: 2.33e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1358101506  983 TCCLTSQTTWGCCPSPKAVCCDDMQHCCPAGYKCGP-GGTCI 1023
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLdGGTCL 42
GRAN smart00277
Granulin;
975-1022 6.94e-10

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 55.41  E-value: 6.94e-10
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*....
gi 1358101506   975 GFSCHDGETCCLTSQTTWGCCPSPKAVCCDDMQHCCPAGYKCGP-GGTC 1022
Cdd:smart00277    3 ETSCPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTdGGTC 51
GRAN smart00277
Granulin;
890-940 1.92e-09

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 54.26  E-value: 1.92e-09
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|.
gi 1358101506   890 DEQSSCSADSTCCLLSKDETGCCPFPEAVCCPDQKHCCPEGYRCDLRRRSC 940
Cdd:smart00277    1 DSETSCPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
Granulin pfam00396
Granulin;
30-70 5.08e-09

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 52.61  E-value: 5.08e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 1358101506   30 SCCQDPTGGFSCCPFHHGECCEDHLHCCPEGMLCSVKDLTC 70
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
GRAN smart00277
Granulin;
814-859 6.99e-09

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 52.72  E-value: 6.99e-09
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 1358101506   814 CPESSTCCKNIAGEWGCCPFSQAVCCTDGEHCCPAHYKCNLSSVSC 859
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
385-430 9.38e-09

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 52.33  E-value: 9.38e-09
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 1358101506   385 CADGTTCCKTKEGDWACCPLPEAVCCEDFVHCCPKGKKCNIAAMKC 430
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
Granulin pfam00396
Granulin;
121-160 2.74e-07

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 47.99  E-value: 2.74e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 1358101506  121 CLLMSTSYGCCPVAQGLACSDGKHCCPNDHECSTDSSLCV 160
Cdd:pfam00396    3 CKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
GRAN smart00277
Granulin;
25-70 2.34e-06

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 45.40  E-value: 2.34e-06
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 1358101506    25 CEAGQSCCQDPTGGFSCCPFHHGECCEDHLHCCPEGMLCSVKDLTC 70
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
108-159 1.89e-05

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 43.09  E-value: 1.89e-05
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|..
gi 1358101506   108 TCPDGSSCpaefsCLLMSTSYGCCPVAQGLACSDGKHCCPNDHECSTDSSLC 159
Cdd:smart00277    5 SCPDGTTC-----CLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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