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Conserved domains on  [gi|1385123312|ref|NP_001349803|]
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ankyrin repeat domain-containing protein 26 isoform 2 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3496 super family cl13439
Domain of unknown function (DUF3496); This presumed domain is functionally uncharacterized. ...
 79-180 1.15e-08

Domain of unknown function (DUF3496); This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is about 110 amino acids in length.


The actual alignment was detected with superfamily member pfam12001:

Pssm-ID: 463425 [Multi-domain]  Cd Length: 109  Bit Score: 52.36  E-value: 1.15e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1385123312  79 SQMELM--ELTSELAKAR-MQNDSCKMEVQKYKELYLKELRSNNALLSRLQNRTCKCPEQSCSNHGEEMRWKTSSMVALV 155
Cdd:pfam12001   2 SQMELRikDLESELSKMKtSQEDSNKIELEKYKQLYLEELKVRKSLSNKLNKTNERLAEVSTKLLVEKQQNRSLLSTLTT 81

                          90       100
                  ....*....|....*....|....*
gi 1385123312 156 GPHPECPQVPYLTRSTMEPQGNVPQ 180
Cdd:pfam12001  82 RPVLESPCVGNLNNSLVLNRNFIPR 106
 
Name Accession Description Interval E-value
DUF3496 pfam12001
Domain of unknown function (DUF3496); This presumed domain is functionally uncharacterized. ...
 79-180 1.15e-08

Domain of unknown function (DUF3496); This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is about 110 amino acids in length.


Pssm-ID: 463425 [Multi-domain]  Cd Length: 109  Bit Score: 52.36  E-value: 1.15e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1385123312  79 SQMELM--ELTSELAKAR-MQNDSCKMEVQKYKELYLKELRSNNALLSRLQNRTCKCPEQSCSNHGEEMRWKTSSMVALV 155
Cdd:pfam12001   2 SQMELRikDLESELSKMKtSQEDSNKIELEKYKQLYLEELKVRKSLSNKLNKTNERLAEVSTKLLVEKQQNRSLLSTLTT 81

                          90       100
                  ....*....|....*....|....*
gi 1385123312 156 GPHPECPQVPYLTRSTMEPQGNVPQ 180
Cdd:pfam12001  82 RPVLESPCVGNLNNSLVLNRNFIPR 106
 
Name Accession Description Interval E-value
DUF3496 pfam12001
Domain of unknown function (DUF3496); This presumed domain is functionally uncharacterized. ...
 79-180 1.15e-08

Domain of unknown function (DUF3496); This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is about 110 amino acids in length.


Pssm-ID: 463425 [Multi-domain]  Cd Length: 109  Bit Score: 52.36  E-value: 1.15e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1385123312  79 SQMELM--ELTSELAKAR-MQNDSCKMEVQKYKELYLKELRSNNALLSRLQNRTCKCPEQSCSNHGEEMRWKTSSMVALV 155
Cdd:pfam12001   2 SQMELRikDLESELSKMKtSQEDSNKIELEKYKQLYLEELKVRKSLSNKLNKTNERLAEVSTKLLVEKQQNRSLLSTLTT 81

                          90       100
                  ....*....|....*....|....*
gi 1385123312 156 GPHPECPQVPYLTRSTMEPQGNVPQ 180
Cdd:pfam12001  82 RPVLESPCVGNLNNSLVLNRNFIPR 106
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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