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nuclear envelope pore membrane protein POM 121 [Danio rerio]
Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
POM121
pfam15229 POM121 family;
286-525
2.06e-79
POM121 family;
Pssm-ID: 464572 [Multi-domain]
Cd Length: 226
Bit Score: 259.98
E-value: 2.06e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 286 R ESRKR E V - DE EDK S ASS GQ K SKRRR H DSSGS S QSAF E PLLANG A PS QL VPKPG S LKRG MN S SLI E E S IM KR srtssvss 364
Cdd:pfam15229 1 K ESRKR T V k DE DGQ S VTE GQ D SKRRR P DSSGS A QSAF R PLLANG V PS SF VPKPG P LKRG LH S KSS E D S LI KR -------- 72
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 365 isg APVP S GVPG S V RN P I R SSYSS SQ G Y PQ RRAA S SLSL SP FT SP GG SR C QTP E R A AKKAR E E DAT S P SS TSFA K T DK va 444
Cdd:pfam15229 73 --- SQTS S LSSC S K RN A I T SSYSS TR G F PQ LQKR S GPGA SP LS SP AS SR S QTP Q R P AKKAR S E EGH S S SS SASV K S DK -- 147
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 445 adp DPS P NTTKL TP KSEAPVATSTSDSGS S GGK RKRKI Q L VTTN RG DQIS LPPPP EV GY TI T VK DLD M EKKAAL SK I Q KV 524
Cdd:pfam15229 148 --- EKQ P EKVAD TP SGKKQNSRNSPPTSG S SRP RKRKI P L LPSR RG EPLT LPPPP QL GY RV T AE DLD L EKKAAL QW I N KV 224
.
gi 1485835056 525 L 525
Cdd:pfam15229 225 L 225
Nucleoporin_FG2 super family
cl37900 Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ...
1012-1183
1.09e-06
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.
pfam15967 :Pssm-ID: 435043 [Multi-domain]
Cd Length: 586
Bit Score: 52.75
E-value: 1.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 1012 P F T FG T AA STSAPAF G TN S QPAF G GVSSGFS fgn TTT PSATPVF G ATTQTAAPAP apapt FTFG GAPTANQN T A P S ---- 1087
Cdd:pfam15967 19 G F S FG A AA ASNPGST G GF S FGTL G AAPAATA --- TTT TATLGLG G GLFGQKPATG ----- FTFG TPASSTAA T G P T gltl 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 1088 - TPA P -- P AS G GF NF G --- ASL S S TPF GT PA PAAQPQ G F S F G ANN T DSKPAF G TSTPAFGQASPGMSMPFG S P G TPGFGA 1161
Cdd:pfam15967 91 g TPA A tt A AS T GF SL G fnk PAA S A TPF SL PA SSTSGG G L S L G SVL T STAAQQ G ATGFTLNLGGTPATTTAV S T G LSLGST 170
170 180
....*....|....*....|..
gi 1485835056 1162 MGG LG A S P F g ASPA S FSI G TG T 1183
Cdd:pfam15967 171 LTS LG G S L F - QNTN S TGL G QT T 191
Chi1 super family
cl43877 Chitinase [Carbohydrate transport and metabolism];
877-1095
7.27e-04
Chitinase [Carbohydrate transport and metabolism];
COG3469 :Pssm-ID: 442692 [Multi-domain]
Cd Length: 534
Bit Score: 43.59
E-value: 7.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 877 W S TP T TSA P ATNPTFQFGA T STTT A TP A LNTNTASVGSANSAFQF G AAKP AA APQ A QNTFTFGQQ S TNQNSTT T PFGGFG 956
Cdd:COG3469 2 S S VS T AAS P TAGGASATAV T LLGA A AT A ASVTLTAATATTVVSTT G SVVV AA SGS A GSGTGTTAA S STAATSS T TSTTAT 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 957 V T SN A TTSSEAPT T QTTFGS stfttssnf PASTPQALAAPKPFAF GA AGAS S GA S PFTFG T AA S TSAPAFGTN S QPAFGG 1036
Cdd:COG3469 82 A T AA A AAATSTSA T LVATST --------- ASGANTGTSTVTTTST GA GSVT S TT S STAGS T TT S GASATSSAG S TTTTTT 152
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1485835056 1037 VS SGFSFGNT TT PSA T PVFGATTQ T AAP A PAP A PTF T FG GA P T ANQN T APS T PA PP AS G 1095
Cdd:COG3469 153 VS GTETATGG TT TTS T TTTTTSAS T TPS A TTT A TAT T AS GA T T PSAT T TAT T TG PP TP G 211
Chi1 super family
cl43877 Chitinase [Carbohydrate transport and metabolism];
654-877
2.03e-03
Chitinase [Carbohydrate transport and metabolism];
COG3469 :Pssm-ID: 442692 [Multi-domain]
Cd Length: 534
Bit Score: 42.05
E-value: 2.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 654 L TA P TL M G TTTA A PA V PVSSLS A PAASIIPS S G VV K --- S ESGP T ALQSSF S APSSI S SPAFKPATSMPSTF A QILAQP L 730
Cdd:COG3469 17 A TA V TL L G AAAT A AS V TLTAAT A TTVVSTTG S V VV A asg S AGSG T GTTAAS S TAATS S TTSTTATATAAAAA A TSTSAT L 96
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 731 QPP ST I S SLGG G S S lfslik P V A T PASEPPKS T VAAPTNTAASVN S ISNPL SS GFKPIFSAASTTPASTPEVKP T QP T FK 810
Cdd:COG3469 97 VAT ST A S GANT G T S ------ T V T T TSTGAGSV T STTSSTAGSTTT S GASAT SS AGSTTTTTTVSGTETATGGTT T TS T TT 170
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1485835056 811 PLFGST T isgvsafgq T ITP TT STP A AP AS qnsamlf G GL T STQP TT VPSSAA P ATQT P SQS L F G K W 877
Cdd:COG3469 171 TTTSAS T --------- T PSA TT TAT A TT AS ------- G AT T PSAT TT ATTTGP P TPGL P KHV L V G Y W 221
Name
Accession
Description
Interval
E-value
POM121
pfam15229 POM121 family;
286-525
2.06e-79
POM121 family;
Pssm-ID: 464572 [Multi-domain]
Cd Length: 226
Bit Score: 259.98
E-value: 2.06e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 286 R ESRKR E V - DE EDK S ASS GQ K SKRRR H DSSGS S QSAF E PLLANG A PS QL VPKPG S LKRG MN S SLI E E S IM KR srtssvss 364
Cdd:pfam15229 1 K ESRKR T V k DE DGQ S VTE GQ D SKRRR P DSSGS A QSAF R PLLANG V PS SF VPKPG P LKRG LH S KSS E D S LI KR -------- 72
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 365 isg APVP S GVPG S V RN P I R SSYSS SQ G Y PQ RRAA S SLSL SP FT SP GG SR C QTP E R A AKKAR E E DAT S P SS TSFA K T DK va 444
Cdd:pfam15229 73 --- SQTS S LSSC S K RN A I T SSYSS TR G F PQ LQKR S GPGA SP LS SP AS SR S QTP Q R P AKKAR S E EGH S S SS SASV K S DK -- 147
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 445 adp DPS P NTTKL TP KSEAPVATSTSDSGS S GGK RKRKI Q L VTTN RG DQIS LPPPP EV GY TI T VK DLD M EKKAAL SK I Q KV 524
Cdd:pfam15229 148 --- EKQ P EKVAD TP SGKKQNSRNSPPTSG S SRP RKRKI P L LPSR RG EPLT LPPPP QL GY RV T AE DLD L EKKAAL QW I N KV 224
.
gi 1485835056 525 L 525
Cdd:pfam15229 225 L 225
Nucleoporin_FG2
pfam15967 Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ...
1012-1183
1.09e-06
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.
Pssm-ID: 435043 [Multi-domain]
Cd Length: 586
Bit Score: 52.75
E-value: 1.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 1012 P F T FG T AA STSAPAF G TN S QPAF G GVSSGFS fgn TTT PSATPVF G ATTQTAAPAP apapt FTFG GAPTANQN T A P S ---- 1087
Cdd:pfam15967 19 G F S FG A AA ASNPGST G GF S FGTL G AAPAATA --- TTT TATLGLG G GLFGQKPATG ----- FTFG TPASSTAA T G P T gltl 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 1088 - TPA P -- P AS G GF NF G --- ASL S S TPF GT PA PAAQPQ G F S F G ANN T DSKPAF G TSTPAFGQASPGMSMPFG S P G TPGFGA 1161
Cdd:pfam15967 91 g TPA A tt A AS T GF SL G fnk PAA S A TPF SL PA SSTSGG G L S L G SVL T STAAQQ G ATGFTLNLGGTPATTTAV S T G LSLGST 170
170 180
....*....|....*....|..
gi 1485835056 1162 MGG LG A S P F g ASPA S FSI G TG T 1183
Cdd:pfam15967 171 LTS LG G S L F - QNTN S TGL G QT T 191
Chi1
COG3469 Chitinase [Carbohydrate transport and metabolism];
877-1095
7.27e-04
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain]
Cd Length: 534
Bit Score: 43.59
E-value: 7.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 877 W S TP T TSA P ATNPTFQFGA T STTT A TP A LNTNTASVGSANSAFQF G AAKP AA APQ A QNTFTFGQQ S TNQNSTT T PFGGFG 956
Cdd:COG3469 2 S S VS T AAS P TAGGASATAV T LLGA A AT A ASVTLTAATATTVVSTT G SVVV AA SGS A GSGTGTTAA S STAATSS T TSTTAT 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 957 V T SN A TTSSEAPT T QTTFGS stfttssnf PASTPQALAAPKPFAF GA AGAS S GA S PFTFG T AA S TSAPAFGTN S QPAFGG 1036
Cdd:COG3469 82 A T AA A AAATSTSA T LVATST --------- ASGANTGTSTVTTTST GA GSVT S TT S STAGS T TT S GASATSSAG S TTTTTT 152
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1485835056 1037 VS SGFSFGNT TT PSA T PVFGATTQ T AAP A PAP A PTF T FG GA P T ANQN T APS T PA PP AS G 1095
Cdd:COG3469 153 VS GTETATGG TT TTS T TTTTTSAS T TPS A TTT A TAT T AS GA T T PSAT T TAT T TG PP TP G 211
Chi1
COG3469 Chitinase [Carbohydrate transport and metabolism];
654-877
2.03e-03
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain]
Cd Length: 534
Bit Score: 42.05
E-value: 2.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 654 L TA P TL M G TTTA A PA V PVSSLS A PAASIIPS S G VV K --- S ESGP T ALQSSF S APSSI S SPAFKPATSMPSTF A QILAQP L 730
Cdd:COG3469 17 A TA V TL L G AAAT A AS V TLTAAT A TTVVSTTG S V VV A asg S AGSG T GTTAAS S TAATS S TTSTTATATAAAAA A TSTSAT L 96
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 731 QPP ST I S SLGG G S S lfslik P V A T PASEPPKS T VAAPTNTAASVN S ISNPL SS GFKPIFSAASTTPASTPEVKP T QP T FK 810
Cdd:COG3469 97 VAT ST A S GANT G T S ------ T V T T TSTGAGSV T STTSSTAGSTTT S GASAT SS AGSTTTTTTVSGTETATGGTT T TS T TT 170
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1485835056 811 PLFGST T isgvsafgq T ITP TT STP A AP AS qnsamlf G GL T STQP TT VPSSAA P ATQT P SQS L F G K W 877
Cdd:COG3469 171 TTTSAS T --------- T PSA TT TAT A TT AS ------- G AT T PSAT TT ATTTGP P TPGL P KHV L V G Y W 221
DUF5585
pfam17823 Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
544-876
2.48e-03
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain]
Cd Length: 506
Bit Score: 41.87
E-value: 2.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 544 VSAPT L SLFSQPA P I S TSGTA PA TSVVPSLLSL S T P KPETTP A ITTTPAPTIDLTIT A SST AS S AP L T LI SS PAITTASL 623
Cdd:pfam17823 110 AASRA L AAAASSS P S S AAQSL PA AIAALPSEAF S A P RAAACR A NASAAPRAAIAAAS A PHA AS P AP R T AA SS TTAASSTT 189
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 624 T A ATTVS TA PA S SIS ----- NPLLESLKNMKNNPLL TA PTLM G TTTA A PAVPVSSLSAPAASII pss GVVKSES G PT A LQ 698
Cdd:pfam17823 190 A A SSAPT TA AS S APA tltpa RGISTAATATGHPAAG TA LAAV G NSSP A AGTVTAAVGTVTPAAL --- ATLAAAA G TV A SA 266
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 699 SSFSAPSSISSPAFK PA TS MPS TFAQILAQPLQPPSTISSLGGG S SLFSLIKPVAT P ASE P PKS T VAAP T NTAASVNSIS 778
Cdd:pfam17823 267 AGTINMGDPHARRLS PA KH MPS DTMARNPAAPMGAQAQGPIIQV S TDQPVHNTAGE P TPS P SNT T LEPN T PKSVASTNLA 346
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 779 NPLSSGFKPIFSA AS TT P ---- AST PEV KP T Q PT FK P -------- LF G STTISGVSAFGQTI T PT T STPAAPASQNSAML 846
Cdd:pfam17823 347 VVTTTKAQAKEPS AS PV P vlht SMI PEV EA T S PT TQ P spllptqg AA G PGILLAPEQVATEA T AG T ASAGPTPRSSGDPK 426
330 340 350
....*....|....*....|....*....|
gi 1485835056 847 FGGLT S T Q PT T VPSSAAPA T QTPSQS L FG K 876
Cdd:pfam17823 427 TLAMA S C Q LS T QGQYLVVT T DPLTPA L VD K 456
PPE
COG5651 PPE-repeat protein [Function unknown];
987-1188
4.09e-03
PPE-repeat protein [Function unknown];
Pssm-ID: 444372 [Multi-domain]
Cd Length: 385
Bit Score: 41.03
E-value: 4.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 987 A S TP QALAA P KPFAF G AAGASSG A SPFTFGTAASTSAPAFGTNS Q PAF GG VS SG FSFGNTTTPSATPV F --- GA TTQT AA 1063
Cdd:COG5651 163 A L TP FTQPP P TITNP G GLLGAQN A GSGNTSSNPGFANLGLTGLN Q VGI GG LN SG SGPIGLNSGPGNTG F agt GA AAGA AA 242
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 1064 P A P A P A PTFTF G GAPTANQNT A PSTP A PPASGGFNFGA S LSSTPFGTPA P AAQPQ G FSFG A NN T DSKPAF G TSTP A F G QA 1143
Cdd:COG5651 243 A A A A A A AAAGA G ASAALASLA A TLLN A SSLGLAATAAS S AATNLGLAGS P LGLAG G GAGA A AA T GLGLGA G GAAG A A G AT 322
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1485835056 1144 SP G MSMPF G SPGTPGFG A M G GLG A SPFG A SP A SFSI G TGTKTS G A 1188
Cdd:COG5651 323 GA G AALGA G AAAAAAGA A A G AGA A AAAA A GG A GGGG G GALGAG G G 367
PRK12323
PRK12323 DNA polymerase III subunit gamma/tau;
601-801
8.57e-03
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain]
Cd Length: 700
Bit Score: 40.24
E-value: 8.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 601 A SST A SS AP LTLISS PA ITT A SLT AA TT V ST APA SS is N P LL E S L KNMKNNPLLTAPTLMGTTT A AP A V P VSSLSAP AA S 680
Cdd:PRK12323 391 A PAA A AP AP AAPPAA PA AAP A AAA AA RA V AA APA RR -- S P AP E A L AAARQASARGPGGAPAPAP A PA A A P AAAARPA AA G 468
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 681 II P SSGVVKSESGPT A lqss FS A PSSISSPAFK P ATSM P ST FA QILAQPLQPPSTISSLGGGSSLFSLIKPV A TPASE P P 760
Cdd:PRK12323 469 PR P VAAAAAAAPARA A ---- PA A APAPADDDPP P WEEL P PE FA SPAPAQPDAAPAGWVAESIPDPATADPDD A FETLA P A 544
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1485835056 761 KSTVA AP TNT AA svnsi SN P LSSGFK P IF SA ASTTPASTPE 801
Cdd:PRK12323 545 PAAAP AP RAA AA ----- TE P VVAPRP P RA SA SGLPDMFDGD 580
Name
Accession
Description
Interval
E-value
POM121
pfam15229 POM121 family;
286-525
2.06e-79
POM121 family;
Pssm-ID: 464572 [Multi-domain]
Cd Length: 226
Bit Score: 259.98
E-value: 2.06e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 286 R ESRKR E V - DE EDK S ASS GQ K SKRRR H DSSGS S QSAF E PLLANG A PS QL VPKPG S LKRG MN S SLI E E S IM KR srtssvss 364
Cdd:pfam15229 1 K ESRKR T V k DE DGQ S VTE GQ D SKRRR P DSSGS A QSAF R PLLANG V PS SF VPKPG P LKRG LH S KSS E D S LI KR -------- 72
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 365 isg APVP S GVPG S V RN P I R SSYSS SQ G Y PQ RRAA S SLSL SP FT SP GG SR C QTP E R A AKKAR E E DAT S P SS TSFA K T DK va 444
Cdd:pfam15229 73 --- SQTS S LSSC S K RN A I T SSYSS TR G F PQ LQKR S GPGA SP LS SP AS SR S QTP Q R P AKKAR S E EGH S S SS SASV K S DK -- 147
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 445 adp DPS P NTTKL TP KSEAPVATSTSDSGS S GGK RKRKI Q L VTTN RG DQIS LPPPP EV GY TI T VK DLD M EKKAAL SK I Q KV 524
Cdd:pfam15229 148 --- EKQ P EKVAD TP SGKKQNSRNSPPTSG S SRP RKRKI P L LPSR RG EPLT LPPPP QL GY RV T AE DLD L EKKAAL QW I N KV 224
.
gi 1485835056 525 L 525
Cdd:pfam15229 225 L 225
Nucleoporin_FG2
pfam15967 Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ...
1012-1183
1.09e-06
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.
Pssm-ID: 435043 [Multi-domain]
Cd Length: 586
Bit Score: 52.75
E-value: 1.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 1012 P F T FG T AA STSAPAF G TN S QPAF G GVSSGFS fgn TTT PSATPVF G ATTQTAAPAP apapt FTFG GAPTANQN T A P S ---- 1087
Cdd:pfam15967 19 G F S FG A AA ASNPGST G GF S FGTL G AAPAATA --- TTT TATLGLG G GLFGQKPATG ----- FTFG TPASSTAA T G P T gltl 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 1088 - TPA P -- P AS G GF NF G --- ASL S S TPF GT PA PAAQPQ G F S F G ANN T DSKPAF G TSTPAFGQASPGMSMPFG S P G TPGFGA 1161
Cdd:pfam15967 91 g TPA A tt A AS T GF SL G fnk PAA S A TPF SL PA SSTSGG G L S L G SVL T STAAQQ G ATGFTLNLGGTPATTTAV S T G LSLGST 170
170 180
....*....|....*....|..
gi 1485835056 1162 MGG LG A S P F g ASPA S FSI G TG T 1183
Cdd:pfam15967 171 LTS LG G S L F - QNTN S TGL G QT T 191
Chi1
COG3469 Chitinase [Carbohydrate transport and metabolism];
877-1095
7.27e-04
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain]
Cd Length: 534
Bit Score: 43.59
E-value: 7.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 877 W S TP T TSA P ATNPTFQFGA T STTT A TP A LNTNTASVGSANSAFQF G AAKP AA APQ A QNTFTFGQQ S TNQNSTT T PFGGFG 956
Cdd:COG3469 2 S S VS T AAS P TAGGASATAV T LLGA A AT A ASVTLTAATATTVVSTT G SVVV AA SGS A GSGTGTTAA S STAATSS T TSTTAT 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 957 V T SN A TTSSEAPT T QTTFGS stfttssnf PASTPQALAAPKPFAF GA AGAS S GA S PFTFG T AA S TSAPAFGTN S QPAFGG 1036
Cdd:COG3469 82 A T AA A AAATSTSA T LVATST --------- ASGANTGTSTVTTTST GA GSVT S TT S STAGS T TT S GASATSSAG S TTTTTT 152
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1485835056 1037 VS SGFSFGNT TT PSA T PVFGATTQ T AAP A PAP A PTF T FG GA P T ANQN T APS T PA PP AS G 1095
Cdd:COG3469 153 VS GTETATGG TT TTS T TTTTTSAS T TPS A TTT A TAT T AS GA T T PSAT T TAT T TG PP TP G 211
Chi1
COG3469 Chitinase [Carbohydrate transport and metabolism];
654-877
2.03e-03
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain]
Cd Length: 534
Bit Score: 42.05
E-value: 2.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 654 L TA P TL M G TTTA A PA V PVSSLS A PAASIIPS S G VV K --- S ESGP T ALQSSF S APSSI S SPAFKPATSMPSTF A QILAQP L 730
Cdd:COG3469 17 A TA V TL L G AAAT A AS V TLTAAT A TTVVSTTG S V VV A asg S AGSG T GTTAAS S TAATS S TTSTTATATAAAAA A TSTSAT L 96
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 731 QPP ST I S SLGG G S S lfslik P V A T PASEPPKS T VAAPTNTAASVN S ISNPL SS GFKPIFSAASTTPASTPEVKP T QP T FK 810
Cdd:COG3469 97 VAT ST A S GANT G T S ------ T V T T TSTGAGSV T STTSSTAGSTTT S GASAT SS AGSTTTTTTVSGTETATGGTT T TS T TT 170
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1485835056 811 PLFGST T isgvsafgq T ITP TT STP A AP AS qnsamlf G GL T STQP TT VPSSAA P ATQT P SQS L F G K W 877
Cdd:COG3469 171 TTTSAS T --------- T PSA TT TAT A TT AS ------- G AT T PSAT TT ATTTGP P TPGL P KHV L V G Y W 221
DUF5585
pfam17823 Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
544-876
2.48e-03
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain]
Cd Length: 506
Bit Score: 41.87
E-value: 2.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 544 VSAPT L SLFSQPA P I S TSGTA PA TSVVPSLLSL S T P KPETTP A ITTTPAPTIDLTIT A SST AS S AP L T LI SS PAITTASL 623
Cdd:pfam17823 110 AASRA L AAAASSS P S S AAQSL PA AIAALPSEAF S A P RAAACR A NASAAPRAAIAAAS A PHA AS P AP R T AA SS TTAASSTT 189
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 624 T A ATTVS TA PA S SIS ----- NPLLESLKNMKNNPLL TA PTLM G TTTA A PAVPVSSLSAPAASII pss GVVKSES G PT A LQ 698
Cdd:pfam17823 190 A A SSAPT TA AS S APA tltpa RGISTAATATGHPAAG TA LAAV G NSSP A AGTVTAAVGTVTPAAL --- ATLAAAA G TV A SA 266
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 699 SSFSAPSSISSPAFK PA TS MPS TFAQILAQPLQPPSTISSLGGG S SLFSLIKPVAT P ASE P PKS T VAAP T NTAASVNSIS 778
Cdd:pfam17823 267 AGTINMGDPHARRLS PA KH MPS DTMARNPAAPMGAQAQGPIIQV S TDQPVHNTAGE P TPS P SNT T LEPN T PKSVASTNLA 346
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 779 NPLSSGFKPIFSA AS TT P ---- AST PEV KP T Q PT FK P -------- LF G STTISGVSAFGQTI T PT T STPAAPASQNSAML 846
Cdd:pfam17823 347 VVTTTKAQAKEPS AS PV P vlht SMI PEV EA T S PT TQ P spllptqg AA G PGILLAPEQVATEA T AG T ASAGPTPRSSGDPK 426
330 340 350
....*....|....*....|....*....|
gi 1485835056 847 FGGLT S T Q PT T VPSSAAPA T QTPSQS L FG K 876
Cdd:pfam17823 427 TLAMA S C Q LS T QGQYLVVT T DPLTPA L VD K 456
Chi1
COG3469 Chitinase [Carbohydrate transport and metabolism];
762-970
3.01e-03
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain]
Cd Length: 534
Bit Score: 41.66
E-value: 3.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 762 ST V A A PT NTA AS VNSISNPLSSGFKPIFSAAST T PAST pevkptqptfkplf G STT I S G V S A FGQTITPT T S T P AA PASQ 841
Cdd:COG3469 5 ST A A S PT AGG AS ATAVTLLGAAATAASVTLTAA T ATTV -------------- V STT G S V V V A ASGSAGSG T G T T AA SSTA 70
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 842 NSAMLFGGLTSTQPTTVPSSAAP AT QTPSQSLF G KWST ---- P TTS AP A TNP T FQFGA T STT T A T PALNTNTASVGSANS 917
Cdd:COG3469 71 ATSSTTSTTATATAAAAAATSTS AT LVATSTAS G ANTG tstv T TTS TG A GSV T STTSS T AGS T T T SGASATSSAGSTTTT 150
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1485835056 918 AFQF G AAKPAAAPQAQN T F T FGQQSTNQN S T TT PFGGFGVTSNA T T S SEAPT T 970
Cdd:COG3469 151 TTVS G TETATGGTTTTS T T T TTTSASTTP S A TT TATATTASGAT T P S ATTTA T 203
PPE
COG5651 PPE-repeat protein [Function unknown];
987-1188
4.09e-03
PPE-repeat protein [Function unknown];
Pssm-ID: 444372 [Multi-domain]
Cd Length: 385
Bit Score: 41.03
E-value: 4.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 987 A S TP QALAA P KPFAF G AAGASSG A SPFTFGTAASTSAPAFGTNS Q PAF GG VS SG FSFGNTTTPSATPV F --- GA TTQT AA 1063
Cdd:COG5651 163 A L TP FTQPP P TITNP G GLLGAQN A GSGNTSSNPGFANLGLTGLN Q VGI GG LN SG SGPIGLNSGPGNTG F agt GA AAGA AA 242
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 1064 P A P A P A PTFTF G GAPTANQNT A PSTP A PPASGGFNFGA S LSSTPFGTPA P AAQPQ G FSFG A NN T DSKPAF G TSTP A F G QA 1143
Cdd:COG5651 243 A A A A A A AAAGA G ASAALASLA A TLLN A SSLGLAATAAS S AATNLGLAGS P LGLAG G GAGA A AA T GLGLGA G GAAG A A G AT 322
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1485835056 1144 SP G MSMPF G SPGTPGFG A M G GLG A SPFG A SP A SFSI G TGTKTS G A 1188
Cdd:COG5651 323 GA G AALGA G AAAAAAGA A A G AGA A AAAA A GG A GGGG G GALGAG G G 367
PRK12323
PRK12323 DNA polymerase III subunit gamma/tau;
601-801
8.57e-03
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain]
Cd Length: 700
Bit Score: 40.24
E-value: 8.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 601 A SST A SS AP LTLISS PA ITT A SLT AA TT V ST APA SS is N P LL E S L KNMKNNPLLTAPTLMGTTT A AP A V P VSSLSAP AA S 680
Cdd:PRK12323 391 A PAA A AP AP AAPPAA PA AAP A AAA AA RA V AA APA RR -- S P AP E A L AAARQASARGPGGAPAPAP A PA A A P AAAARPA AA G 468
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1485835056 681 II P SSGVVKSESGPT A lqss FS A PSSISSPAFK P ATSM P ST FA QILAQPLQPPSTISSLGGGSSLFSLIKPV A TPASE P P 760
Cdd:PRK12323 469 PR P VAAAAAAAPARA A ---- PA A APAPADDDPP P WEEL P PE FA SPAPAQPDAAPAGWVAESIPDPATADPDD A FETLA P A 544
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1485835056 761 KSTVA AP TNT AA svnsi SN P LSSGFK P IF SA ASTTPASTPE 801
Cdd:PRK12323 545 PAAAP AP RAA AA ----- TE P VVAPRP P RA SA SGLPDMFDGD 580
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
