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Conserved domains on  [gi|1870200925|ref|NP_001372224|]
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G protein-regulated inducer of neurite outgrowth 2 isoform 2 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
GRIN_C super family cl21097
G protein-regulated inducer of neurite outgrowth C-terminus; This represents the C-terminus of ...
 373-474 1.94e-31

G protein-regulated inducer of neurite outgrowth C-terminus; This represents the C-terminus of the G protein-regulated inducer of neurite outgrowth proteins.


The actual alignment was detected with superfamily member pfam15235:

Pssm-ID: 464577  Cd Length: 130  Bit Score: 117.29  E-value: 1.94e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1870200925 373 ATSPSLEAPAALHVFPEVTLGSSLEEV-----PSPVRDVRWDAEGMTWEVYGAAVDLEVLGVAIQKHLEMQFEQLQRAPA 447
Cdd:pfam15235   4 MTPQSASAEAASKLDPEVRVEDKEEEKlaekqKKPVRDVVWDEQGMTWEVYGASVDPEVLGMAIQKHLEKQIEEHEKLIA 83

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1870200925 448 S-------------EDSLSVEGRRGP--LRAVMQSLRRPSCC 474
Cdd:pfam15235  84 AqtgslrkspssgeETSPKKRKRRQPnvFRSMLQNVRRPNCC 125
 
Name Accession Description Interval E-value
GRIN_C pfam15235
G protein-regulated inducer of neurite outgrowth C-terminus; This represents the C-terminus of ...
 373-474 1.94e-31

G protein-regulated inducer of neurite outgrowth C-terminus; This represents the C-terminus of the G protein-regulated inducer of neurite outgrowth proteins.


Pssm-ID: 464577  Cd Length: 130  Bit Score: 117.29  E-value: 1.94e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1870200925 373 ATSPSLEAPAALHVFPEVTLGSSLEEV-----PSPVRDVRWDAEGMTWEVYGAAVDLEVLGVAIQKHLEMQFEQLQRAPA 447
Cdd:pfam15235   4 MTPQSASAEAASKLDPEVRVEDKEEEKlaekqKKPVRDVVWDEQGMTWEVYGASVDPEVLGMAIQKHLEKQIEEHEKLIA 83

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1870200925 448 S-------------EDSLSVEGRRGP--LRAVMQSLRRPSCC 474
Cdd:pfam15235  84 AqtgslrkspssgeETSPKKRKRRQPnvFRSMLQNVRRPNCC 125
 
Name Accession Description Interval E-value
GRIN_C pfam15235
G protein-regulated inducer of neurite outgrowth C-terminus; This represents the C-terminus of ...
 373-474 1.94e-31

G protein-regulated inducer of neurite outgrowth C-terminus; This represents the C-terminus of the G protein-regulated inducer of neurite outgrowth proteins.


Pssm-ID: 464577  Cd Length: 130  Bit Score: 117.29  E-value: 1.94e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1870200925 373 ATSPSLEAPAALHVFPEVTLGSSLEEV-----PSPVRDVRWDAEGMTWEVYGAAVDLEVLGVAIQKHLEMQFEQLQRAPA 447
Cdd:pfam15235   4 MTPQSASAEAASKLDPEVRVEDKEEEKlaekqKKPVRDVVWDEQGMTWEVYGASVDPEVLGMAIQKHLEKQIEEHEKLIA 83

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1870200925 448 S-------------EDSLSVEGRRGP--LRAVMQSLRRPSCC 474
Cdd:pfam15235  84 AqtgslrkspssgeETSPKKRKRRQPnvFRSMLQNVRRPNCC 125
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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