|
Name |
Accession |
Description |
Interval |
E-value |
| Amidase |
pfam01425 |
Amidase; |
95-562 |
2.54e-116 |
|
Amidase;
Pssm-ID: 396144 [Multi-domain] Cd Length: 442 Bit Score: 352.37 E-value: 2.54e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 95 AVLFTYVGKAWEVNKGTNC-VTSYLADCETQLSQAPRQ-------GLLYGVPVSLKECFTYKGQDSTLGLSLNEGVPAEC 166
Cdd:pfam01425 1 ELVEAFLDRIEAANPKLNAfVTVFFDEALAQAAAADKQraagdpkGPLHGVPIAVKDNIDVKGVPTTAGSKALENYPAPY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 167 DSVVVHVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTVNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPS 246
Cdd:pfam01425 81 DATVVERLRKAGAVILGKTNMDEFAMGSSTENSVFGPTRNPWDLSRTPGGSSGGSAAAVAAGLVPLAIGTDTGGSIRIPA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 247 SFCGICGLKPTGNRLSKSGlkgcVYGQEAVRLSVGPMARDVESLALCLRALLCEDMFRLDPTVPPLPF-REEVYTSSQPL 325
Cdd:pfam01425 161 SFCGLVGLKPTYGRVSRYG----VVGYASSLDQVGPLARSVEDAALLLRVISGYDPKDSTSLPPPVPDyAEPVKKSLKGL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 326 RVGYYETDNYTMPSPAMRRAVLETKQSLEAAGHTLVPFLPSNIPHALEtLSTGGLFSDGGHTFLQNFKGdfvdpCLGDLV 405
Cdd:pfam01425 237 RIGVYREDGYFDLDPEVRRAVEEALAQLEALGHEVVEVDPPSLDYALP-LYYLIAPAEASSNLARYDGV-----PSGPDD 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 406 SILKLPQWLKGLLAFLVKPLLPRLSAFLSNMKSRSAgkLWELQHEIEVYRKTVIAQWRAldLDVVLTP-MLAPALDLNAP 484
Cdd:pfam01425 311 LSELYPRTRAEGLGDEVKRRIILGNYALSAGYYDKY--YLKAQKVRRLIRREFAGLFEE--LDVLLSPtAPTPAPRLGEP 386
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 166795287 485 GratgaVSYTMLYNCLDFPAGVVPVTTVTAEDEAqmehyrgyfgdiwdkmLQKGMKKSvGLPVAVQCVALPWQEELCL 562
Cdd:pfam01425 387 D-----DSPLVMYNLDDFTAGVVPVNLAGLPAIS----------------LPAGFTAD-GLPVGVQIIGKPGDEETLL 442
|
|
| GatA |
COG0154 |
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal ... |
83-571 |
2.28e-42 |
|
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal structure and biogenesis]; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 439924 [Multi-domain] Cd Length: 468 Bit Score: 158.39 E-value: 2.28e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 83 VQKLHSRELAPEAVLFTYVGKAWEVNKGTNCVTSYLAD--------CETQLSQAPRQGLLYGVPVSLKECFTYKGQDSTL 154
Cdd:COG0154 13 AAALRAGEVSAVELVEAALARIEAVNPALNAFVTVDAEralaearaADARRAAGEALGPLAGVPVAVKDLIDVAGLPTTA 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 155 GLSLNEGVPAECDSVVVHVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTVNPWKSskspggssggegALIgsggs---- 230
Cdd:COG0154 93 GSKALADFVPPYDATVVARLRAAGAVILGKTNMPEFAMGGSTENSAYGPTRNPWDP------------DRTpggssggsa 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 231 --------plglgTDIGGSIRFPSSFCGICGLKPTGNRLSKSGLKGCVYGQEavrlSVGPMARDVeslalclrallcEDM 302
Cdd:COG0154 161 aavaaglvplalgSDTGGSIRIPAAFCGLVGLKPTYGRVSRYGVVPLASSLD----QVGPLARTV------------ADA 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 303 FRL----------DPT---VPPLPFREEVYTSSQPLRVGYYETDNYTMP-SPAMRRAVLETKQSLEAAGHTLVPFLPSNI 368
Cdd:COG0154 225 ALLldvlagpdprDPTsapAPVPDYLAALDRDLKGLRIGVPREYFGGDGvDPEVAAAVEAAAAALEALGAEVVEVDLPDL 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 369 PHALE---TLSTGGLFSdgghtflqnfkgdfvdpclgdlvsilklpqWLKGLLAFLVKPLLPRLSAFLSNMKSRSAGKLW 445
Cdd:COG0154 305 DEALAayyTIAAAEAAA------------------------------NLADLLRTRPEGFGPEVRRRILLGAYYSAADYL 354
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 446 ELQHEievyRKTVIAQWRAL--DLDVVLTP---MLAPALDLNAPG------RATGAVSYTMLYNCLDFPAGVVPVttvta 514
Cdd:COG0154 355 KAQRV----RALLRRDFAAAfeDYDVLLTPttpTPAPPIGELDADidpalaMNYLLDRFTAPANLAGLPALSVPA----- 425
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 166795287 515 edeaqmehyrgyfgdiwdkmlqkGMKKSvGLPVAVQCVALPWQEELCLRFMREVERL 571
Cdd:COG0154 426 -----------------------GFTAD-GLPVGLQLIGPPGDEATLLRLAAALEQA 458
|
|
| PRK12470 |
PRK12470 |
amidase; Provisional |
86-569 |
8.03e-25 |
|
amidase; Provisional
Pssm-ID: 171524 [Multi-domain] Cd Length: 462 Bit Score: 107.66 E-value: 8.03e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 86 LHSRELAPEAVLFTYVGKAWEVNKGTNCVTSYLADCETQLSQAPRQGL-------LYGVPVSLKECFTYKGQDSTLGlSL 158
Cdd:PRK12470 18 LADGELTAPMLLEVYLQRIERLDSHLRAYRVVLFDRARAEAEAAQQRLdagerlpLLGVPIAIKDDVDVAGEVTTYG-SA 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 159 NEGVPAECDSVVVHVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTVNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDI 238
Cdd:PRK12470 97 GHGPAATSDAEVVRRLRAAGAVIIGKTNVPELMIMPFTESLAFGATRNPWDPNRTPGGSSGGSAAAVAAGLAPVALGSDG 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 239 GGSIRFPSSFCGICGLKPTGNRLSKSGLKGCVYGqeavrLSV-GPMARDVESLALCLrallceDMFRLDPTvPPLPFREE 317
Cdd:PRK12470 177 GGSIRIPSTWCGLFGLKPQRDRISLEPHDGAWQG-----LSVnGPIARSVMDAALLL------DATTTVPG-PEGEFVAA 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 318 VYTSSQPLRVGyyetdnytmpspamrravLETKQSleaaghTLVPFLPSNiPHALETLSTGGLFSDGGHTFLQnfkgdfV 397
Cdd:PRK12470 245 AAREPGRLRIA------------------LSTRVP------TPLPVRCGK-QELAAVHQAGALLRDLGHDVVV------R 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 398 DPCLGDLVSILKLPQWLKGL----LAFLVKPLLPRLSAFLSNMKSrsagklWELQHEIEVYRKT---VIAQWRAL--DLD 468
Cdd:PRK12470 294 DPDYPAATYANYLPRFFRGIsddaDAQAHPDRLEARTRAIARLGS------FFSDRRMAALRAAevvLSARIQSIfdDVD 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 469 VVLTPMLApaldlNAPGR-----ATGAVS----------YTMLYNCLDFPAGVVPVttvtaedeaqmehyrGYFGDiwdk 533
Cdd:PRK12470 368 VVVTPGTA-----TGPSRigayqRRGAVStlllvvqrvpYFQVWNLTGQPAAVVPW---------------DFDGD---- 423
|
490 500 510
....*....|....*....|....*....|....*.
gi 166795287 534 mlqkgmkksvGLPVAVQCVALPWQEELCLRFMREVE 569
Cdd:PRK12470 424 ----------GLPMSVQLVGRPYDEATLLALAAQIE 449
|
|
| gatA |
TIGR00132 |
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase ... |
83-370 |
2.38e-22 |
|
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase is missing. tRNA(Gln) is misacylated with Glu after which a heterotrimeric amidotransferase converts Glu to Gln. This model represents the amidase chain of that heterotrimer, encoded by the gatA gene. In the Archaea, Asn--tRNA ligase is also missing. This amidase subunit may also function in the conversion of Asp-tRNA(Asn) to Asn-tRNA(Asn), presumably with a different recognition unit to replace gatB. Both Methanococcus jannaschii and Methanobacterium thermoautotrophicum have both authentic gatB and a gatB-related gene, but only one gene like gatA. It has been shown that gatA can be expressed only when gatC is also expressed. In most species expressing the amidotransferase, the gatC ortholog is about 90 residues in length, but in Mycoplasma genitalium and Mycoplasma pneumoniae the gatC equivalent is as the C-terminal domain of a much longer protein. Not surprisingly, the Mycoplasmas also represent the most atypical lineage of gatA orthology. This orthology group is more narrowly defined here than in Proc Natl Acad Aci USA 94, 11819-11826 (1997). In particular, a Rhodococcus homolog found in association with nitrile hydratase genes and described as an enantiomer-selective amidase active on several 2-aryl propionamides, is excluded here. It is likely, however, that the amidase subunit GatA is not exclusively a part of the Glu-tRNA(Gln) amidotransferase heterotrimer and restricted to that function in all species. [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 272925 [Multi-domain] Cd Length: 460 Bit Score: 100.11 E-value: 2.38e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 83 VQKLHSRELAPEAVLFTYVGKAWEVNKGTNcvtSYLADC-ETQLSQAPR-----QGLLYGVPVSLKECFTYKGQDSTLGL 156
Cdd:TIGR00132 2 RQLLKKKEISIKEVLEASLDRIEANKDKIN---AFLEVTvEKALKQAKKldkaiLTPLAGIPIAVKDNISTKGIVTTCAS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 157 SLNEGVPAECDSVVVHVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTVNPWKSSKSPGGSSGGEGALIGSGGSPLGLGT 236
Cdd:TIGR00132 79 KILENYIPPYDATVIERLKQAGALIIGKTNMDEFAMGSSTETSAFGPTKNPWNLDRVPGGSSGGSAAAVAADLAPFSLGS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 237 DIGGSIRFPSSFCGICGLKPTGNRLSKSGLkgCVYgqeAVRL-SVGPMARDVESLALCLRALLCEDMfrLDPT---VPPL 312
Cdd:TIGR00132 159 DTGGSIRQPASFCGVVGFKPTYGRVSRYGL--VAY---ASSLdQIGPFARTVEDIALLLDVISGHDK--RDSTsakVPDP 231
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 166795287 313 PFREEVYTSSQPLRVGYY-----ETDNytmpspAMRRAVLETKQSLEAAGHTLVPFlpsNIPH 370
Cdd:TIGR00132 232 EFFEELKKDLKGLKVGVVkefseEMDK------EVQEKFENALEVLEELGAEIVEV---SFPH 285
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Amidase |
pfam01425 |
Amidase; |
95-562 |
2.54e-116 |
|
Amidase;
Pssm-ID: 396144 [Multi-domain] Cd Length: 442 Bit Score: 352.37 E-value: 2.54e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 95 AVLFTYVGKAWEVNKGTNC-VTSYLADCETQLSQAPRQ-------GLLYGVPVSLKECFTYKGQDSTLGLSLNEGVPAEC 166
Cdd:pfam01425 1 ELVEAFLDRIEAANPKLNAfVTVFFDEALAQAAAADKQraagdpkGPLHGVPIAVKDNIDVKGVPTTAGSKALENYPAPY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 167 DSVVVHVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTVNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPS 246
Cdd:pfam01425 81 DATVVERLRKAGAVILGKTNMDEFAMGSSTENSVFGPTRNPWDLSRTPGGSSGGSAAAVAAGLVPLAIGTDTGGSIRIPA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 247 SFCGICGLKPTGNRLSKSGlkgcVYGQEAVRLSVGPMARDVESLALCLRALLCEDMFRLDPTVPPLPF-REEVYTSSQPL 325
Cdd:pfam01425 161 SFCGLVGLKPTYGRVSRYG----VVGYASSLDQVGPLARSVEDAALLLRVISGYDPKDSTSLPPPVPDyAEPVKKSLKGL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 326 RVGYYETDNYTMPSPAMRRAVLETKQSLEAAGHTLVPFLPSNIPHALEtLSTGGLFSDGGHTFLQNFKGdfvdpCLGDLV 405
Cdd:pfam01425 237 RIGVYREDGYFDLDPEVRRAVEEALAQLEALGHEVVEVDPPSLDYALP-LYYLIAPAEASSNLARYDGV-----PSGPDD 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 406 SILKLPQWLKGLLAFLVKPLLPRLSAFLSNMKSRSAgkLWELQHEIEVYRKTVIAQWRAldLDVVLTP-MLAPALDLNAP 484
Cdd:pfam01425 311 LSELYPRTRAEGLGDEVKRRIILGNYALSAGYYDKY--YLKAQKVRRLIRREFAGLFEE--LDVLLSPtAPTPAPRLGEP 386
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 166795287 485 GratgaVSYTMLYNCLDFPAGVVPVTTVTAEDEAqmehyrgyfgdiwdkmLQKGMKKSvGLPVAVQCVALPWQEELCL 562
Cdd:pfam01425 387 D-----DSPLVMYNLDDFTAGVVPVNLAGLPAIS----------------LPAGFTAD-GLPVGVQIIGKPGDEETLL 442
|
|
| GatA |
COG0154 |
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal ... |
83-571 |
2.28e-42 |
|
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal structure and biogenesis]; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 439924 [Multi-domain] Cd Length: 468 Bit Score: 158.39 E-value: 2.28e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 83 VQKLHSRELAPEAVLFTYVGKAWEVNKGTNCVTSYLAD--------CETQLSQAPRQGLLYGVPVSLKECFTYKGQDSTL 154
Cdd:COG0154 13 AAALRAGEVSAVELVEAALARIEAVNPALNAFVTVDAEralaearaADARRAAGEALGPLAGVPVAVKDLIDVAGLPTTA 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 155 GLSLNEGVPAECDSVVVHVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTVNPWKSskspggssggegALIgsggs---- 230
Cdd:COG0154 93 GSKALADFVPPYDATVVARLRAAGAVILGKTNMPEFAMGGSTENSAYGPTRNPWDP------------DRTpggssggsa 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 231 --------plglgTDIGGSIRFPSSFCGICGLKPTGNRLSKSGLKGCVYGQEavrlSVGPMARDVeslalclrallcEDM 302
Cdd:COG0154 161 aavaaglvplalgSDTGGSIRIPAAFCGLVGLKPTYGRVSRYGVVPLASSLD----QVGPLARTV------------ADA 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 303 FRL----------DPT---VPPLPFREEVYTSSQPLRVGYYETDNYTMP-SPAMRRAVLETKQSLEAAGHTLVPFLPSNI 368
Cdd:COG0154 225 ALLldvlagpdprDPTsapAPVPDYLAALDRDLKGLRIGVPREYFGGDGvDPEVAAAVEAAAAALEALGAEVVEVDLPDL 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 369 PHALE---TLSTGGLFSdgghtflqnfkgdfvdpclgdlvsilklpqWLKGLLAFLVKPLLPRLSAFLSNMKSRSAGKLW 445
Cdd:COG0154 305 DEALAayyTIAAAEAAA------------------------------NLADLLRTRPEGFGPEVRRRILLGAYYSAADYL 354
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 446 ELQHEievyRKTVIAQWRAL--DLDVVLTP---MLAPALDLNAPG------RATGAVSYTMLYNCLDFPAGVVPVttvta 514
Cdd:COG0154 355 KAQRV----RALLRRDFAAAfeDYDVLLTPttpTPAPPIGELDADidpalaMNYLLDRFTAPANLAGLPALSVPA----- 425
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 166795287 515 edeaqmehyrgyfgdiwdkmlqkGMKKSvGLPVAVQCVALPWQEELCLRFMREVERL 571
Cdd:COG0154 426 -----------------------GFTAD-GLPVGLQLIGPPGDEATLLRLAAALEQA 458
|
|
| PRK12470 |
PRK12470 |
amidase; Provisional |
86-569 |
8.03e-25 |
|
amidase; Provisional
Pssm-ID: 171524 [Multi-domain] Cd Length: 462 Bit Score: 107.66 E-value: 8.03e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 86 LHSRELAPEAVLFTYVGKAWEVNKGTNCVTSYLADCETQLSQAPRQGL-------LYGVPVSLKECFTYKGQDSTLGlSL 158
Cdd:PRK12470 18 LADGELTAPMLLEVYLQRIERLDSHLRAYRVVLFDRARAEAEAAQQRLdagerlpLLGVPIAIKDDVDVAGEVTTYG-SA 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 159 NEGVPAECDSVVVHVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTVNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDI 238
Cdd:PRK12470 97 GHGPAATSDAEVVRRLRAAGAVIIGKTNVPELMIMPFTESLAFGATRNPWDPNRTPGGSSGGSAAAVAAGLAPVALGSDG 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 239 GGSIRFPSSFCGICGLKPTGNRLSKSGLKGCVYGqeavrLSV-GPMARDVESLALCLrallceDMFRLDPTvPPLPFREE 317
Cdd:PRK12470 177 GGSIRIPSTWCGLFGLKPQRDRISLEPHDGAWQG-----LSVnGPIARSVMDAALLL------DATTTVPG-PEGEFVAA 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 318 VYTSSQPLRVGyyetdnytmpspamrravLETKQSleaaghTLVPFLPSNiPHALETLSTGGLFSDGGHTFLQnfkgdfV 397
Cdd:PRK12470 245 AAREPGRLRIA------------------LSTRVP------TPLPVRCGK-QELAAVHQAGALLRDLGHDVVV------R 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 398 DPCLGDLVSILKLPQWLKGL----LAFLVKPLLPRLSAFLSNMKSrsagklWELQHEIEVYRKT---VIAQWRAL--DLD 468
Cdd:PRK12470 294 DPDYPAATYANYLPRFFRGIsddaDAQAHPDRLEARTRAIARLGS------FFSDRRMAALRAAevvLSARIQSIfdDVD 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 469 VVLTPMLApaldlNAPGR-----ATGAVS----------YTMLYNCLDFPAGVVPVttvtaedeaqmehyrGYFGDiwdk 533
Cdd:PRK12470 368 VVVTPGTA-----TGPSRigayqRRGAVStlllvvqrvpYFQVWNLTGQPAAVVPW---------------DFDGD---- 423
|
490 500 510
....*....|....*....|....*....|....*.
gi 166795287 534 mlqkgmkksvGLPVAVQCVALPWQEELCLRFMREVE 569
Cdd:PRK12470 424 ----------GLPMSVQLVGRPYDEATLLALAAQIE 449
|
|
| PRK06169 |
PRK06169 |
putative amidase; Provisional |
132-570 |
2.23e-22 |
|
putative amidase; Provisional
Pssm-ID: 180437 [Multi-domain] Cd Length: 466 Bit Score: 100.48 E-value: 2.23e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 132 GLLYGVPVSLKECFTYKGQDSTLG-LSLNEGVPAECDSVVVHVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTVNPWKS 210
Cdd:PRK06169 70 GLLDGVPVSIKDIFLTRGWPTLRGsRAIDADGPWDVDAPAVARLREAGAVLLGKTTTPEFGWKGVTDSPLYGITRNPWDT 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 211 SKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSSFCGICGLKPTGNRL-----SKSGLkgcvygqeavrLS-VGPMA 284
Cdd:PRK06169 150 RLTAGGSSGGAAAAVALGMGPLSVGTDGGGSVRIPASFCGTFGFKPTFGRVplypaSPFGT-----------LAhVGPMT 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 285 RDVESLALCLRALLCEDmFRlDPTV---PPLPFREEVYTSSQPLRVGYYETDNYTMPSPAMRRAVLETKQSLEAAGHTLV 361
Cdd:PRK06169 219 RTVADAALLLDVIARPD-AR-DWSAlppPTTSFLDALDRDVRGLRIAYSPTLGYVDVDPEVAALVAQAVQRLAALGARVE 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 362 PFLPsNIPHALETLSTggLFSDGGHTFLQNF---KGDFVDPclgdlvsilklpqwlkGLLAFLVKPLLPRLSAFLSNMKS 438
Cdd:PRK06169 297 EVDP-GFSDPVEAFHV--LWFAGAARLLRALppgQRALLDP----------------GLRRIAERGATYSASDYLDATAV 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 439 RSA-GKLWELQHEievyrktviaqwralDLDVVLTPML---APALDLNAP-----GRATGAVSYTMLYNCLDFPAGVVPV 509
Cdd:PRK06169 358 RAAlGARMGAFHE---------------RYDLLLTPTLpipAFEAGHDVPpgsglTDWTQWTPFTYPFNLTQQPAASVPC 422
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 166795287 510 TTVTAedeaqmehyrgyfgdiwdkmlqkgmkksvGLPVAVQCVALPWQEELCLRFMREVER 570
Cdd:PRK06169 423 GFTAA-----------------------------GLPVGLQIVGPRHSDDLVLRVARAYEQ 454
|
|
| gatA |
TIGR00132 |
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase ... |
83-370 |
2.38e-22 |
|
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase is missing. tRNA(Gln) is misacylated with Glu after which a heterotrimeric amidotransferase converts Glu to Gln. This model represents the amidase chain of that heterotrimer, encoded by the gatA gene. In the Archaea, Asn--tRNA ligase is also missing. This amidase subunit may also function in the conversion of Asp-tRNA(Asn) to Asn-tRNA(Asn), presumably with a different recognition unit to replace gatB. Both Methanococcus jannaschii and Methanobacterium thermoautotrophicum have both authentic gatB and a gatB-related gene, but only one gene like gatA. It has been shown that gatA can be expressed only when gatC is also expressed. In most species expressing the amidotransferase, the gatC ortholog is about 90 residues in length, but in Mycoplasma genitalium and Mycoplasma pneumoniae the gatC equivalent is as the C-terminal domain of a much longer protein. Not surprisingly, the Mycoplasmas also represent the most atypical lineage of gatA orthology. This orthology group is more narrowly defined here than in Proc Natl Acad Aci USA 94, 11819-11826 (1997). In particular, a Rhodococcus homolog found in association with nitrile hydratase genes and described as an enantiomer-selective amidase active on several 2-aryl propionamides, is excluded here. It is likely, however, that the amidase subunit GatA is not exclusively a part of the Glu-tRNA(Gln) amidotransferase heterotrimer and restricted to that function in all species. [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 272925 [Multi-domain] Cd Length: 460 Bit Score: 100.11 E-value: 2.38e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 83 VQKLHSRELAPEAVLFTYVGKAWEVNKGTNcvtSYLADC-ETQLSQAPR-----QGLLYGVPVSLKECFTYKGQDSTLGL 156
Cdd:TIGR00132 2 RQLLKKKEISIKEVLEASLDRIEANKDKIN---AFLEVTvEKALKQAKKldkaiLTPLAGIPIAVKDNISTKGIVTTCAS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 157 SLNEGVPAECDSVVVHVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTVNPWKSSKSPGGSSGGEGALIGSGGSPLGLGT 236
Cdd:TIGR00132 79 KILENYIPPYDATVIERLKQAGALIIGKTNMDEFAMGSSTETSAFGPTKNPWNLDRVPGGSSGGSAAAVAADLAPFSLGS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 237 DIGGSIRFPSSFCGICGLKPTGNRLSKSGLkgCVYgqeAVRL-SVGPMARDVESLALCLRALLCEDMfrLDPT---VPPL 312
Cdd:TIGR00132 159 DTGGSIRQPASFCGVVGFKPTYGRVSRYGL--VAY---ASSLdQIGPFARTVEDIALLLDVISGHDK--RDSTsakVPDP 231
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 166795287 313 PFREEVYTSSQPLRVGYY-----ETDNytmpspAMRRAVLETKQSLEAAGHTLVPFlpsNIPH 370
Cdd:TIGR00132 232 EFFEELKKDLKGLKVGVVkefseEMDK------EVQEKFENALEVLEELGAEIVEV---SFPH 285
|
|
| PRK07487 |
PRK07487 |
amidase; Provisional |
106-562 |
5.42e-19 |
|
amidase; Provisional
Pssm-ID: 236029 [Multi-domain] Cd Length: 469 Bit Score: 90.03 E-value: 5.42e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 106 EVNKGTNCVTSYLAD--------CETQLSQAPRQGLLYGVPVSLKECFTYKGQDSTLGLSLNEGVPAECDSVVVHVLKLQ 177
Cdd:PRK07487 37 AVNPAINAVVDHRPEealaqadaVDAARARGDDPGPLAGVPVTVKVNVDQAGFATTNGVRLQKDLIAPADSPVVDNLRKA 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 178 GAVPFVHTNVPQSMFSYDCSNPLFGQTVNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSSFCGICGLKPT 257
Cdd:PRK07487 117 GAVIIGRTNTPAFSYRWFTDNPLHGRTLNPWDPSLTPGGSSGGAAAAVAAGIGAIAHGTDIGGSIRYPAYACGVHGLRPT 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 258 GNRLSksglkgCVYGQEAVR------LSV-GPMARDVESlalclRALLCEDMFRLDPTVP---PLPFREEVYtssqPLRV 327
Cdd:PRK07487 197 LGRVP------AYNASSPERpigaqlMSVqGPLARTVAD-----LRLALAAMAAPDPRDPwwvPAPLEGPPR----PKRV 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 328 GYY-ETDNYTmPSPAMRRAVLETKQSLEAAGHTL--VPFLPsNIPHALET---LSTGGLFS--------DGGHTFLQNFK 393
Cdd:PRK07487 262 ALCvRPDGLD-VDPEVEAALRDAARRLEDAGWTVeeVDDTP-PLREAAELqerLWLGDGYEallaaaeaEGDPGALAALR 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 394 GDFvdpclgDLVSILKLPQWLKGLLAflvkpllprlsaflsnmksrsagklwelqheievyRKTVIAQWRAL--DLDVVL 471
Cdd:PRK07487 340 GQR------AKARPLDLAGYMNALAR-----------------------------------RATLTRQWQLFfeDYPLLL 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 472 TPM-----LAPALDLNAPG---RATGAVSYTMLYNCLDFPAGVVPVTTVTaedeaqmehyrgyfgdiwdkmlqkgmkksv 543
Cdd:PRK07487 379 MPVsaelpFPDDLDRQGAEgfrRVWEAQLPQIALPFMGLPGLSVPTGLVG------------------------------ 428
|
490
....*....|....*....
gi 166795287 544 GLPVAVQCVALPWQEELCL 562
Cdd:PRK07487 429 GVPVGVQLVAGRFREDLCL 447
|
|
| PRK06170 |
PRK06170 |
amidase; Provisional |
132-570 |
1.63e-17 |
|
amidase; Provisional
Pssm-ID: 235723 [Multi-domain] Cd Length: 490 Bit Score: 85.47 E-value: 1.63e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 132 GLLYGVPVSLKECFTYKGQDSTLGL-SLNEGVPAEcDSVVVHVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTVNPWKS 210
Cdd:PRK06170 74 GPLLGIPVTVKESFNVAGLPTTWGFpDLRDYVPAE-DAVAVARLKAAGAVILGKTNVPLGLQDWQSYNEIYGTTNNPWDL 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 211 SKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSSFCGICGLKPTgnrLSKSGLKGCVYGQEAVRLS------VGPMA 284
Cdd:PRK06170 153 ARTPGGSSGGSAAALAAGFGALSIGSDIGGSLRVPAHYCGVYAHKPT---LGLVPLRGHIPPPAPALPGqadlavAGPMA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 285 R---DVESLalclrallcedmfrLDPTVPPLPFREEVytssqplrvgyyetdNYTMPSPAMRRAVLETKQSLEAAGHtlv 361
Cdd:PRK06170 230 RsarDLALL--------------LDVMAGPDPLDGGV---------------AYRLALPPARHGRLKDFRVLVLDEH--- 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 362 PFLP--SNIPHALETLSTgGLFSDGGHTflqnfkgDFVDPCLGDLVSILKLPQWLkgLLAFLVKPLLPRLSAFLSNM--- 436
Cdd:PRK06170 278 PLLPtdAAVRAAIERLAA-ALADAGARV-------VRHSPLLPDLAESARLYMRL--LFAASAARFPPDAYADAQARaag 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 437 -----KSRSAGKL---------W-ELQHEIEVYRktviAQWRAL--DLDVVLTPMLA-PALDLNAPGRATG------AVS 492
Cdd:PRK06170 348 lsaddRSLAAERLrgavlshrdWlFADAAREELR----AAWRRFfaEFDVVLCPVTPtPAFPHDHAPDPLErrididGVS 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 493 YTM--------LYNCLDFPAGVVPVTTVTAedeaqmehyrgyfgdiwdkmlqkgmkksvGLPVAVQCVAlPWQEELC-LR 563
Cdd:PRK06170 424 YPYwdqlvwagLATLPGLPATAIPIGLSAT-----------------------------GLPVGVQIVG-PALEDRTpLR 473
|
....*..
gi 166795287 564 FMREVER 570
Cdd:PRK06170 474 LAELLEE 480
|
|
| PRK07056 |
PRK07056 |
amidase; Provisional |
134-287 |
1.47e-15 |
|
amidase; Provisional
Pssm-ID: 235921 [Multi-domain] Cd Length: 454 Bit Score: 79.21 E-value: 1.47e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 134 LYGVPVSLKECFTYKGQDSTLG-LSLNEGVPAECDSVVVHVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTVNPWKSSK 212
Cdd:PRK07056 72 LAGIPVSVKDLFDVAGQVTRAGsRVLADAPPAAADAPAVARLRRAGAVLIGRTNMTEFAFSGLGLNPHYGTPRNPWRRDV 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 213 SPG--------------GSSGGEGALigsggsplglGTDIGGSIRFPSSFCGICGLKPTGNRLSKSGlkgcvygqeAVRL 278
Cdd:PRK07056 152 GDGripggsssgaavsvADGMAAAAL----------GTDTGGSIRIPAALCGLTGFKPTARRVPLQG---------AVPL 212
|
170
....*....|....
gi 166795287 279 S-----VGPMARDV 287
Cdd:PRK07056 213 SttldsIGPLARSV 226
|
|
| PRK09201 |
PRK09201 |
AtzE family amidohydrolase; |
83-570 |
8.68e-15 |
|
AtzE family amidohydrolase;
Pssm-ID: 236409 [Multi-domain] Cd Length: 465 Bit Score: 76.93 E-value: 8.68e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 83 VQKLHSRELAPEAVLFTYVGKAWEVNKGTNCVTSYLAdcETQLSQAPRQ----------GLLYGVPVSLKECFTYKGQDS 152
Cdd:PRK09201 13 AAAVRAGELSARAVAQATLARIARANPQLNAFTAVTA--ERALAEAARIdaaraageplGPLAGVPFAVKNLFDVAGLTT 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 153 TLGLSLN-EGVPAECDSVVVHVLKLQGAVPFVHTNVPQsmFSYDCS--NPLFGQTVNPWKSSKSPGGSSGGEGALIGSGG 229
Cdd:PRK09201 91 LAGSKINrDRPPATRDATAVRRLEAAGAVLVGALNMDE--YAYGFTteNSHYGATRNPHDLTRIAGGSSGGSAAAVAAGL 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 230 SPLGLGTDIGGSIRFPSSFCGICGLKPTGNRLSKSGlkgcVYGQEAVRLSVGPMARDVESLALCLRALLCEDmfRLDPTV 309
Cdd:PRK09201 169 VPFTLGSDTNGSIRVPASLCGIFGLKPTYGRLSRAG----SFPFVASLDHIGPFARSVADLALVYDVLQGPD--PQDPFQ 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 310 ---PPLPFREEVYTSSQPLRV----GYYEtdnyTMPSPAMRRAVLETKQSLEAAGHTLVP---------FLPSNiphale 373
Cdd:PRK09201 243 adrPAEPTAPLLDRGAEGLRIavlgGYFA----QWADPEARAAVDRVAKALGATREVELPeaararaaaFIITA------ 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 374 tlstgglfSDGGHTFLQNFK---GDFvDPCLGDlvsilklpqwlkgllAFLVKPLLPrlsaflsnmksrsAGKLWELQHE 450
Cdd:PRK09201 313 --------SEGGNLHLPALRtrpQDF-DPASRD---------------RLLAGAMLP-------------AAWYVQAQRF 355
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 451 IEVYRKTVIAQWRALDLdvvltpMLAPALdlnaPGRATGAVSYTMLYNCLDFPA----GV---------VPVTTVTaede 517
Cdd:PRK09201 356 RRWFRQAVLELFEHVDV------LIAPAT----PCSAPLIGQETMRIDGVELPVranlGIltqpisfigLPVVAVP---- 421
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 166795287 518 aqmehyrgyfgdiwdkmlqkgMKKSVGLPVAVQCVALPWQEELCLRFMREVER 570
Cdd:PRK09201 422 ---------------------LRTPGGLPIGVQLIAAPWREDLALRAAAALEQ 453
|
|
| PRK07488 |
PRK07488 |
indoleacetamide hydrolase; |
119-362 |
5.31e-14 |
|
indoleacetamide hydrolase;
Pssm-ID: 236030 [Multi-domain] Cd Length: 472 Bit Score: 74.62 E-value: 5.31e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 119 ADCETQLSQAPRQGLLyGVPVSLKECFTYKGQDSTLG-LSLNEGVPAeCDSVVVHVLKLQGAVPFVHTNVPQSMFSYDCS 197
Cdd:PRK07488 60 RRIDAQRAAGAALLLA-GVPIVIKDNINTAGMPTTAGtPALLGFVPA-TDAPVVQRLLDAGAVPLGKANMHELAFGITSN 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 198 NPLFGQTVNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSSFCGICGLKPTGNRlsksglkgcvYGQEAV- 276
Cdd:PRK07488 138 NGAFGAVRNPYDPARIAGGSSGGTAAAVAARLAPAGLGTDTGGSVRIPAALCGVVGLRPTVGR----------YSGDGVv 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 277 -----RLSVGPMARDVeslalclrallcEDMFRLD-------PTVPPLPFReevytssqPLRVGYYETDNYTMPSPAMRR 344
Cdd:PRK07488 208 pishtRDTVGPIARSV------------ADLALLDavitgdaALPAPVALA--------GLRLGVPAAPFWDGLDPDVAA 267
|
250
....*....|....*...
gi 166795287 345 AVLETKQSLEAAGHTLVP 362
Cdd:PRK07488 268 VAEAALAKLAAAGVTFVE 285
|
|
| PRK07042 |
PRK07042 |
amidase; Provisional |
88-365 |
6.27e-14 |
|
amidase; Provisional
Pssm-ID: 235915 [Multi-domain] Cd Length: 464 Bit Score: 74.24 E-value: 6.27e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 88 SRELAP----EAVLfTYVGkAWE--VNkgtncvTSYLADCETQLSQA-----------PRqGLLYGVPVSLKECFTYKGQ 150
Cdd:PRK07042 18 ARSLSPvevtEAVL-AHIA-RWEphLN------ALYAFDPEAARAAArastarwakgePL-GPLDGVPVTIKENIATRGV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 151 DSTLGLSLNEGVPAECDSVVVHVLKLQGAVPFVHTNVPQ-SMFSYDCSNpLFGQTVNPWKSSKSPGGSSGGEGALIGSGG 229
Cdd:PRK07042 89 PVPLGTAATDLPPAAADAPPAARLREAGAVILAKTTMPDyGMLSSGLSS-FHGLTRNPWDLDQNPGGSSAGAGAAAAAGY 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 230 SPLGLGTDIGGSIRFPSSFCGICGLKPTGNRLSksgLKGCVYGQEAvrlsvGPMARDVESLALCLRALLCEDmfRLDPT- 308
Cdd:PRK07042 168 GPLHLGTDIGGSVRLPAGWCGIVGLKPSLGRIP---IDPPYTGRCA-----GPMTRTVDDAALLMSVLSRPD--ARDGTs 237
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 166795287 309 VPPLPFR-EEVYTSSQPLRVGYYETDNYTMP-SPAMRRAVLETKQSLEAAGHTLVPFLP 365
Cdd:PRK07042 238 LPPQDIDwSDLDIDVRGLRIGLMLDAGCGLAvDPEVRAAVEAAARRFEAAGAIVEPVPP 296
|
|
| PRK07486 |
PRK07486 |
amidase; Provisional |
84-375 |
1.47e-13 |
|
amidase; Provisional
Pssm-ID: 236028 [Multi-domain] Cd Length: 484 Bit Score: 73.12 E-value: 1.47e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 84 QKLHSRELAPEAVLFTYVGKAWEVNKGTNCVTSyLADCETQLSQA----------PRQGLLYGVPVSLKECFTYKGQDST 153
Cdd:PRK07486 19 RAIRRRQVSCVEVMRAYLAHIERVNPAVNAIVA-LRDRDALLAEAaekdaalargEYRGWLHGMPQAPKDLAPTKGIRTT 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 154 LGLSLNEG-VPAEcDSVVVHVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTVNPWKSSKSPGGSSGGEGALIGSGGSPL 232
Cdd:PRK07486 98 LGSPIFADqVPQE-DAIVVERMRAAGAIFIGKTNTPEFGLGSHTYNPVYGATRNPYDPSRSAGGSSGGAAAALALRMLPV 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 233 GLGTDIGGSIRFPSSFCGICGLKPTGNRLSkSGLKGCVYGQeavRLSV-GPMARDVeslalclrallcEDMFRL------ 305
Cdd:PRK07486 177 ADGSDMMGSLRNPAAFNNVYGFRPSQGRVP-HGPGGDVFVQ---QLGTeGPMGRTV------------EDVALLlavqag 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 306 -DPTVpPLPFREEVYTSSQPL-------RV-------GYYetdnytmpspAMRRAVLETKQS----LEAAGHTLVPFLPs 366
Cdd:PRK07486 241 yDPRD-PLSLAEDPARFAQPLeadlrgkRIawlgdwgGYL----------PMEAGVLELCEAalatLRELGCDVEAALP- 308
|
....*....
gi 166795287 367 niPHALETL 375
Cdd:PRK07486 309 --AFPPERL 315
|
|
| PRK06529 |
PRK06529 |
amidase; Provisional |
83-383 |
1.62e-13 |
|
amidase; Provisional
Pssm-ID: 180608 [Multi-domain] Cd Length: 482 Bit Score: 72.93 E-value: 1.62e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 83 VQKLHSRELAPEAVLFTYVGKAWEVNKGTNCVTSylADCETQLSQAPRQ---GLLY-GVPVSLKECF-TYKGQDSTLGLS 157
Cdd:PRK06529 10 AQAVQQGQVTPLELVTQAIYKAKKLNPTLNAIVS--ERYEEALEEAKQRdfsGKPFaGVPIFLKDLGqELKGQLSTSGSR 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 158 LNEGVPAECDSVVVHVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTVNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTD 237
Cdd:PRK06529 88 LFKNYQATKTDLYVKRLEDLGFIILGRSNTPEFGFKNISDSSLHGPVNLPFDNSRNAGGSSGGAAALVSSGIVALAAASD 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 238 IGGSIRFPSSFCGICGLKPTGNRL-----SKSGLKGCvygqeAVRLSVGPMARDVESLALCLRALLCEDMFRLdptvPPL 312
Cdd:PRK06529 168 GGGSIRIPASFNGLIGLKPSRGRIpvgpgSYRGWQGA-----SVHFALTKSVRDTRRLLYYLQMYQMESPFPL----ATL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 313 PfREEVYTS-SQPLRVGYYETDNYTMP-SPAMRRAVLETKQSLEAAGHTLVPF--LPSNIPHALET------LSTGGLFS 382
Cdd:PRK06529 239 S-KESLFQSlQRPLKIAFYQRSPDGSPvSLDAAKALKQAVTFLREQGHEVVELeeFPLDMTEVMRSyyimnsVETAAMFD 317
|
.
gi 166795287 383 D 383
Cdd:PRK06529 318 D 318
|
|
| PRK06061 |
PRK06061 |
amidase; Provisional |
134-365 |
2.19e-11 |
|
amidase; Provisional
Pssm-ID: 235686 [Multi-domain] Cd Length: 483 Bit Score: 66.26 E-value: 2.19e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 134 LYGVPVSLKECFTYKGQDSTLGLSlNEGVPAECDSVVVHVLKLQGAVPFVHTNVP---QSMFSydcSNPLFGQTVNPWKS 210
Cdd:PRK06061 82 LLGVPIAVKDDVDVAGVPTAFGTA-GEVPPATADSEVVRRLRAAGAVIVGKTNTCelgQWPFT---SGPAFGHTRNPWSR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 211 SKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSSFCGICGLKPTGNRLSKSGLKGCVYGqeavrLSV-GPMARDVES 289
Cdd:PRK06061 158 DHTPGGSSGGSAAAVAAGLVTAAIGSDGAGSVRIPAAWTHLVGIKPQRGRISTWPLPEAFNG-----LTVnGPLARTVAD 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 290 LAL---CLRALLCEDMFRldptvpPLPFREEVYTSSQP--LRVGYYETDNYT-MPS---PAMRRAVLETKQSLEAAGHTL 360
Cdd:PRK06061 233 AALlldAASGNHPGDRHR------PPPVTVSDAVGRAPgpLRIALSTRFPFTgFPAklhPEIRAAVRRVAEQLALLGHTV 306
|
....*
gi 166795287 361 VPFLP 365
Cdd:PRK06061 307 VPADP 311
|
|
| PRK07869 |
PRK07869 |
amidase; Provisional |
126-569 |
3.47e-11 |
|
amidase; Provisional
Pssm-ID: 181154 [Multi-domain] Cd Length: 468 Bit Score: 65.39 E-value: 3.47e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 126 SQAPRQ--GLLYGVPVSLKECFTYKGQDSTLGLSLNEGVPAECDSVVVHVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQ 203
Cdd:PRK07869 64 AARPGSqgGFFSGVPTFIKDNVDVAGLPTMHGSDAWTPRPAKADSDFARQFLATGLISLGKTQLPEFGFSASTEHPRLGP 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 204 TVNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSSFCGICGLKPTGNRLSksglkgcvyGQEAVR------ 277
Cdd:PRK07869 144 VRNPWNTDYSAGASSGGSAALVAAGVVPIAHANDGGGSIRIPAACCGLVGLKPSRGRLP---------LDPELRrlpvni 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 278 LSVGPMARDVESlaLCLRALLCEDMFRlDPTVPPLpfREEVYTSSQPLRVGYYeTDNYTMP--SPAMRRAVLETKQSLEA 355
Cdd:PRK07869 215 VANGVLTRTVRD--TAAFYREAERYYR-NPKLPPI--GDVTGPGKQRLRIAVV-TDSVTGReaDPEVREAVLATARLLEE 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 356 AGHTLVPFlpsniphaletlstgglfsdgGHTFLQNFKGDFVDpclgdlvsilklpQWlkGLLAFLV----KPLLP---- 427
Cdd:PRK07869 289 LGHRVEPV---------------------DLPVPASFVDDFLL-------------YW--GFLAFALvrggRRTFGpsfd 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 428 --RLSAFLSNMKSRSAGKLWELQHEIEVYRKT--VIAQWRAlDLDVVLTPMLA---PALDLNAPG--------RATGAVS 492
Cdd:PRK07869 333 rtRLDNLTLGLARHARRNLHRLPLAIARLRRLrrVYARFFG-TYDVVLTPTLAhttPEIGYLDPTqdfdtvldRLISYVA 411
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 166795287 493 YTMLYNCLDFPAGVVPVttvtaedeAQMEHyrgyfgdiwdkmlqkgmkksvGLPVAVQCVALPWQEELCLRFMREVE 569
Cdd:PRK07869 412 FTPLQNATGEPAISLPL--------GQSSD---------------------GLPVGMMFSADVGDEATLLELAYELE 459
|
|
| PRK06102 |
PRK06102 |
amidase; |
132-357 |
8.59e-11 |
|
amidase;
Pssm-ID: 235698 [Multi-domain] Cd Length: 452 Bit Score: 64.29 E-value: 8.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 132 GLLYGVPVSLKECFTYKGQDSTLGLS-LNEGVPAECDSVVVHVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTVNPWKS 210
Cdd:PRK06102 68 GLLDGIPIAWKDLFDVAGSVTTAGSVvLANAAPASRDAAVVALLARAGMVSIGRTNMSEFAFSGLGLNPHYGTPVNPRST 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 211 SKSPGGSSGGEGALIGSGGSPLGLG--TDIGGSIRFPSSFCGICGLKPTGNRLSKSGlkgcVYGQEAVRLSVGPMARDVe 288
Cdd:PRK06102 148 DVPRIPGGSSSGSAVAVAAGLVPVAmgTDTGGSVRIPAAFNGLVGYKATRGRYSMDG----VFPLAKSLDSLGPLCRSV- 222
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 166795287 289 slalclrallcEDMFRLD--------PTVPPLPFReevytsSQPLRVGyyETDNYTMPSPAMRRAVLETKQSLEAAG 357
Cdd:PRK06102 223 -----------RDAVWIDaamrgltaPDVVRRPLA------GLRLVVP--ETVVFDDAEPGVRAAFEAAVERLQAAG 280
|
|
| PRK08137 |
PRK08137 |
amidase; Provisional |
132-362 |
4.56e-09 |
|
amidase; Provisional
Pssm-ID: 236161 [Multi-domain] Cd Length: 497 Bit Score: 59.01 E-value: 4.56e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 132 GLLYGVPVSLKECF-TYKGQDSTLG-LSLNEGVPAEcDSVVVHVLKLQGAVPFVHTNVPQ-----SMFSYDCSNPLFGQT 204
Cdd:PRK08137 71 GPLHGIPVLLKDNIdAADPMPTTAGsLALAGNRPTR-DAFLVARLRDAGAVILGKANLSEwanfrSTRSSSGWSARGGLT 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 205 VNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSSFCGICGLKPTGNRLSKSGLKGCVYGQEavrlSVGPMA 284
Cdd:PRK08137 150 RNPYALDRSPCGSSSGSGAAVAAGLAAVAIGTETDGSITCPAAINGLVGLKPTVGLVSRDGIVPISHSQD----TAGPMT 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 285 RDVESLALCLRALLCEDmfRLDPTVPPLPFREEVYT---SSQPL---RVGYYEtdNYTMPSPAMRRAVLETKQSLEAAGH 358
Cdd:PRK08137 226 RTVADAAAVLTAIAGGD--PADPATASAPAPAVDYVaalDADALrgaRLGVAR--NYLGYHPEVDAQFERALAELKAAGA 301
|
....
gi 166795287 359 TLVP 362
Cdd:PRK08137 302 VVID 305
|
|
| PRK05962 |
PRK05962 |
amidase; Validated |
132-287 |
1.66e-08 |
|
amidase; Validated
Pssm-ID: 168315 [Multi-domain] Cd Length: 424 Bit Score: 57.10 E-value: 1.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 132 GLLYGVPVSLKECFTYKGQDSTLG-LSLNEGVPAECDSVVVHVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTVNPWKS 210
Cdd:PRK05962 44 GPLDGRIVSIKDLFDVAGEPTLAGsVIRRDAPPAGADALIVQRLRNAGAVIIGKTHMTEFAFTPVGLNPHYGEPGNAIDP 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 211 SKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSSFCGICGLKPTGNRLSKSGlkgcvygqeAVRL-----SVGPMAR 285
Cdd:PRK05962 124 ARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAALNGLVGFKPTARRIPLEG---------AFPLspsldSIGPLAR 194
|
..
gi 166795287 286 DV 287
Cdd:PRK05962 195 TV 196
|
|
| PRK08310 |
PRK08310 |
amidase; Provisional |
236-363 |
3.60e-08 |
|
amidase; Provisional
Pssm-ID: 181375 [Multi-domain] Cd Length: 395 Bit Score: 55.76 E-value: 3.60e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 236 TDIGGSIRFPSSFCGICGLKPTGNRLSKSGlkgcvygqeAVRLS-----VGPMARDVEslalclralLCEDMFRL----D 306
Cdd:PRK08310 130 TDTGGSVRAPASFCGLYGLRPTHGRISLEG---------VMPLApsfdtVGWFARDIA---------LLERVGEVllgdD 191
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 166795287 307 PTVPPLPFREevytssqplrvgYYETDNYTMPSPAMRRAVLETKQSLEAAGHTLVPF 363
Cdd:PRK08310 192 AQEFPLTQRL------------LIPVDLFALLDPAVRAALEAALARLRPHLGPAKPA 236
|
|
| PRK06828 |
PRK06828 |
amidase; Provisional |
131-288 |
1.32e-06 |
|
amidase; Provisional
Pssm-ID: 180715 [Multi-domain] Cd Length: 491 Bit Score: 50.97 E-value: 1.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 131 QGLLYGVPVSLKECF-TYKGQDSTLG-LSLNEGVPAEcDSVVVHVLKLQGAVPFVHTNVPQ--SMFSYDCSNPLF---GQ 203
Cdd:PRK06828 77 RGPLHGIPVLLKDNIeTNDSMHTSAGtIALEQHISSE-DAFLVTKLREAGAVILGKANMTElaNFMSFEMWAGYSargGQ 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 204 TVNPW---KSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSSFCGICGLKPTGNRLSKSGLKGCVYGQEavrlSV 280
Cdd:PRK06828 156 TINPYgtgEDDMFVGGSSTGSAIAVAANFTVVSVGTETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQD----TA 231
|
....*...
gi 166795287 281 GPMARDVE 288
Cdd:PRK06828 232 GPFARTVT 239
|
|
| PRK07235 |
PRK07235 |
amidase; Provisional |
237-288 |
5.07e-06 |
|
amidase; Provisional
Pssm-ID: 235979 [Multi-domain] Cd Length: 502 Bit Score: 49.23 E-value: 5.07e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 166795287 237 DIGGSIRFPSSFCGICGLKPTGNRLSKSGlkgcVYGQEAVRLSVGPMARDVE 288
Cdd:PRK07235 191 DQGGSIRIPSAWCGIYGMKPTHGLVPYTG----AFPIERTIDHLGPMTATVR 238
|
|
| PRK06707 |
PRK06707 |
amidase; Provisional |
124-398 |
1.05e-03 |
|
amidase; Provisional
Pssm-ID: 235855 [Multi-domain] Cd Length: 536 Bit Score: 41.82 E-value: 1.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 124 QLSQAPRQGLlYGVPVSLKECF-TYKGQDSTLG-LSLNEGVPAEcDSVVVHVLKLQGAVPFVHTNVPQSMFSYDCSNPL- 200
Cdd:PRK06707 128 ERSRNKKSNL-YGIPVVVKDNVqTAKVMPTSAGtYVLKDWIADQ-DATIVKQLKEEGAFVLGKANMSEWANYLSFTMPSg 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 201 ----FGQTVNPWKSSKSPGG-SSGGEGALIGSGGSPLGLGTDIGGSIRFPSSFCGICGLKPTGNRLSKSGLkgcvygqea 275
Cdd:PRK06707 206 ysgkKGQNLNPYGPIKFDTSgSSSGSATVVAADFAPLAVGTETTGSIVAPAAQQSVVGLRPSLGMVSRTGI--------- 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166795287 276 VRLS-----VGPMARDVESLALCLRALLCEDmfRLDPTVPPLPFREEV-YTSSQPL------RVGYYETDNytmPSPAMR 343
Cdd:PRK06707 277 IPLAetldtAGPMARTVKDAATLFNAMIGYD--EKDVMTEKVKDKERIdYTKDLSIdglkgkKIGLLFSVD---QQDENR 351
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 166795287 344 RAVLET-KQSLEAAGHTLVPFLpsniphaleTLSTGGLfsDGGHTFLQNFKGDFVD 398
Cdd:PRK06707 352 KAVAEKiRKDLQDAGAILTDYI---------QLNNGGV--DNLQTLEYEFKHNVND 396
|
|
| PLN02722 |
PLN02722 |
indole-3-acetamide amidohydrolase |
236-266 |
1.19e-03 |
|
indole-3-acetamide amidohydrolase
Pssm-ID: 166363 Cd Length: 422 Bit Score: 41.41 E-value: 1.19e-03
10 20 30
....*....|....*....|....*....|.
gi 166795287 236 TDIGGSIRFPSSFCGICGLKPTGNRLSKSGL 266
Cdd:PLN02722 131 TDTGGSVRVPASYCGIFGFRPSHGAVSTVGV 161
|
|
| |
