|
Name |
Accession |
Description |
Interval |
E-value |
| Nth |
COG0177 |
Endonuclease III [Replication, recombination and repair]; |
122-302 |
2.23e-65 |
|
Endonuclease III [Replication, recombination and repair];
Pssm-ID: 439947 [Multi-domain] Cd Length: 198 Bit Score: 203.79 E-value: 2.23e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 122 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVA 201
Cdd:COG0177 21 FELLVATILSAQTTDERVNKATPRLFARYPTPEALAAADLEELEELIRPIGLYRNKAKNIIALARILVEKYGGEVPETRE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 202 ELVALPGVGPKMAHLAMAVAWGtVSGIAVDTHVHRIANRLRWTKkaTKSPEETRAALEEWLPRELWHEINGLLVGFGQQT 281
Cdd:COG0177 101 ELESLPGVGRKTANVVLNFAFG-KPAIAVDTHVHRVSNRLGLVP--GKDPEEVEKDLMKLIPKEYWGDLHHLLILHGRYI 177
|
170 180
....*....|....*....|.
gi 1514769207 282 CLPVHPRCHACLNQALCPAAQ 302
Cdd:COG0177 178 CKARKPKCEECPLADLCPYYG 198
|
|
| ENDO3c |
smart00478 |
endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), ... |
130-279 |
2.42e-51 |
|
endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases
Pssm-ID: 214684 [Multi-domain] Cd Length: 149 Bit Score: 165.90 E-value: 2.42e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 130 LSSQTKDQVTAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVAELVALPGV 209
Cdd:smart00478 1 LSQQTTDERVNKATERLFEKFPTPEDLAAADEEELEELIRGLGFYRRKARYLIELARILVEEYGGEVPDDREELLKLPGV 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 210 GPKMAHLAMAVAWGTVsGIAVDTHVHRIANRLRWTKKaTKSPEETRAALEEWLPRELWHEINGLLVGFGQ 279
Cdd:smart00478 81 GRKTANAVLSFALGKP-FIPVDTHVLRIAKRLGLVDK-KSTPEEVEKLLEKLLPEEDWRELNLLLIDFGR 148
|
|
| ENDO3c |
cd00056 |
endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), ... |
122-278 |
6.60e-48 |
|
endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases
Pssm-ID: 238013 [Multi-domain] Cd Length: 158 Bit Score: 157.40 E-value: 6.60e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 122 YQVLLSLMLSSQTKDQVTAGAMQRLRAR-GLTVDSILQTDDATLGKLIYPVGFwRSKVKYIKQTSAILQQHYGGDI---P 197
Cdd:cd00056 1 FEVLVSEILSQQTTDKAVNKAYERLFERyGPTPEALAAADEEELRELIRSLGY-RRKAKYLKELARAIVEGFGGLVlddP 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 198 ASVAELVALPGVGPKMAHLAMAVAWGtVSGIAVDTHVHRIANRLRWTKKaTKSPEETRAALEEWLPRELWHEINGLLVGF 277
Cdd:cd00056 80 DAREELLALPGVGRKTANVVLLFALG-PDAFPVDTHVRRVLKRLGLIPK-KKTPEELEELLEELLPKPYWGEANQALMDL 157
|
.
gi 1514769207 278 G 278
Cdd:cd00056 158 G 158
|
|
| nth |
TIGR01083 |
endonuclease III; This equivalog model identifes nth members of the pfam00730 superfamily ... |
122-289 |
3.82e-44 |
|
endonuclease III; This equivalog model identifes nth members of the pfam00730 superfamily (HhH-GPD: Helix-hairpin-helix and Gly/Pro rich loop followed by a conserved aspartate). The major members of the superfamily are nth and mutY. [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273434 [Multi-domain] Cd Length: 192 Bit Score: 149.07 E-value: 3.82e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 122 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVA 201
Cdd:TIGR01083 28 FELLVATILSAQATDKRVNKATPKLFEVYPTPQALAQAGLEELEEYIKSIGLYRNKAKNIIELCRKLVERYGGEVPEDRE 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 202 ELVALPGVGPKMAHLAMAVAWGtVSGIAVDTHVHRIANRLRWTKkaTKSPEETRAALEEWLPRELWHEINGLLVGFGQQT 281
Cdd:TIGR01083 108 ELVKLPGVGRKTANVVLNVAFG-IPAIAVDTHVFRVSNRLGLSK--GKDPIKVEEDLMKLVPREFWVKLHHWLILHGRYT 184
|
....*...
gi 1514769207 282 CLPVHPRC 289
Cdd:TIGR01083 185 CKARKPLC 192
|
|
| HhH-GPD |
pfam00730 |
HhH-GPD superfamily base excision DNA repair protein; This family contains a diverse range of ... |
126-264 |
7.04e-43 |
|
HhH-GPD superfamily base excision DNA repair protein; This family contains a diverse range of structurally related DNA repair proteins. The superfamily is called the HhH-GPD family after its hallmark Helix-hairpin-helix and Gly/Pro rich loop followed by a conserved aspartate. This includes endonuclease III, EC:4.2.99.18 and MutY an A/G-specific adenine glycosylase, both have a C terminal 4Fe-4S cluster. The family also includes 8-oxoguanine DNA glycosylases. The methyl-CPG binding protein MBD4 also contains a related domain that is a thymine DNA glycosylase. The family also includes DNA-3-methyladenine glycosylase II EC:3.2.2.21 and other members of the AlkA family.
Pssm-ID: 425841 [Multi-domain] Cd Length: 141 Bit Score: 143.96 E-value: 7.04e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 126 LSLMLSSQTKDQVTAGAMQRLRAR-GLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVAELV 204
Cdd:pfam00730 1 VSAILSQQTSDKAVNKITERLFEKfFPTPEDLADADEEELRELIRGLGFYRRKAKYLKELARILVEGYGGEVPLDEEELE 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1514769207 205 A-LPGVGPKMAHLAMAVAWG-TVSGIAVDTHVHRIANRLRWTkKATKSPEETRAALEEWLPR 264
Cdd:pfam00730 81 AlLKGVGRWTAEAVLIFALGrPDPLPVVDTHVRRVLKRLGLI-KEKPTPKEVERELEELWPP 141
|
|
| PRK10702 |
PRK10702 |
endonuclease III; Provisional |
122-298 |
6.81e-24 |
|
endonuclease III; Provisional
Pssm-ID: 182661 [Multi-domain] Cd Length: 211 Bit Score: 96.62 E-value: 6.81e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 122 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVA 201
Cdd:PRK10702 30 FELLIAVLLSAQATDVSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENVIKTCRILLEQHNGEVPEDRA 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 202 ELVALPGVGPKMAHLAMAVAWGTVSgIAVDTHVHRIANRLRWTkkATKSPEETRAALEEWLPRELWHEINGLLVGFGQQT 281
Cdd:PRK10702 110 ALEALPGVGRKTANVVLNTAFGWPT-IAVDTHIFRVCNRTQFA--PGKNVEQVEEKLLKVVPAEFKVDCHHWLILHGRYT 186
|
170
....*....|....*..
gi 1514769207 282 CLPVHPRCHACLNQALC 298
Cdd:PRK10702 187 CIARKPRCGSCIIEDLC 203
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| Nth |
COG0177 |
Endonuclease III [Replication, recombination and repair]; |
122-302 |
2.23e-65 |
|
Endonuclease III [Replication, recombination and repair];
Pssm-ID: 439947 [Multi-domain] Cd Length: 198 Bit Score: 203.79 E-value: 2.23e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 122 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVA 201
Cdd:COG0177 21 FELLVATILSAQTTDERVNKATPRLFARYPTPEALAAADLEELEELIRPIGLYRNKAKNIIALARILVEKYGGEVPETRE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 202 ELVALPGVGPKMAHLAMAVAWGtVSGIAVDTHVHRIANRLRWTKkaTKSPEETRAALEEWLPRELWHEINGLLVGFGQQT 281
Cdd:COG0177 101 ELESLPGVGRKTANVVLNFAFG-KPAIAVDTHVHRVSNRLGLVP--GKDPEEVEKDLMKLIPKEYWGDLHHLLILHGRYI 177
|
170 180
....*....|....*....|.
gi 1514769207 282 CLPVHPRCHACLNQALCPAAQ 302
Cdd:COG0177 178 CKARKPKCEECPLADLCPYYG 198
|
|
| ENDO3c |
smart00478 |
endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), ... |
130-279 |
2.42e-51 |
|
endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases
Pssm-ID: 214684 [Multi-domain] Cd Length: 149 Bit Score: 165.90 E-value: 2.42e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 130 LSSQTKDQVTAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVAELVALPGV 209
Cdd:smart00478 1 LSQQTTDERVNKATERLFEKFPTPEDLAAADEEELEELIRGLGFYRRKARYLIELARILVEEYGGEVPDDREELLKLPGV 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 210 GPKMAHLAMAVAWGTVsGIAVDTHVHRIANRLRWTKKaTKSPEETRAALEEWLPRELWHEINGLLVGFGQ 279
Cdd:smart00478 81 GRKTANAVLSFALGKP-FIPVDTHVLRIAKRLGLVDK-KSTPEEVEKLLEKLLPEEDWRELNLLLIDFGR 148
|
|
| ENDO3c |
cd00056 |
endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), ... |
122-278 |
6.60e-48 |
|
endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases
Pssm-ID: 238013 [Multi-domain] Cd Length: 158 Bit Score: 157.40 E-value: 6.60e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 122 YQVLLSLMLSSQTKDQVTAGAMQRLRAR-GLTVDSILQTDDATLGKLIYPVGFwRSKVKYIKQTSAILQQHYGGDI---P 197
Cdd:cd00056 1 FEVLVSEILSQQTTDKAVNKAYERLFERyGPTPEALAAADEEELRELIRSLGY-RRKAKYLKELARAIVEGFGGLVlddP 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 198 ASVAELVALPGVGPKMAHLAMAVAWGtVSGIAVDTHVHRIANRLRWTKKaTKSPEETRAALEEWLPRELWHEINGLLVGF 277
Cdd:cd00056 80 DAREELLALPGVGRKTANVVLLFALG-PDAFPVDTHVRRVLKRLGLIPK-KKTPEELEELLEELLPKPYWGEANQALMDL 157
|
.
gi 1514769207 278 G 278
Cdd:cd00056 158 G 158
|
|
| nth |
TIGR01083 |
endonuclease III; This equivalog model identifes nth members of the pfam00730 superfamily ... |
122-289 |
3.82e-44 |
|
endonuclease III; This equivalog model identifes nth members of the pfam00730 superfamily (HhH-GPD: Helix-hairpin-helix and Gly/Pro rich loop followed by a conserved aspartate). The major members of the superfamily are nth and mutY. [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273434 [Multi-domain] Cd Length: 192 Bit Score: 149.07 E-value: 3.82e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 122 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVA 201
Cdd:TIGR01083 28 FELLVATILSAQATDKRVNKATPKLFEVYPTPQALAQAGLEELEEYIKSIGLYRNKAKNIIELCRKLVERYGGEVPEDRE 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 202 ELVALPGVGPKMAHLAMAVAWGtVSGIAVDTHVHRIANRLRWTKkaTKSPEETRAALEEWLPRELWHEINGLLVGFGQQT 281
Cdd:TIGR01083 108 ELVKLPGVGRKTANVVLNVAFG-IPAIAVDTHVFRVSNRLGLSK--GKDPIKVEEDLMKLVPREFWVKLHHWLILHGRYT 184
|
....*...
gi 1514769207 282 CLPVHPRC 289
Cdd:TIGR01083 185 CKARKPLC 192
|
|
| HhH-GPD |
pfam00730 |
HhH-GPD superfamily base excision DNA repair protein; This family contains a diverse range of ... |
126-264 |
7.04e-43 |
|
HhH-GPD superfamily base excision DNA repair protein; This family contains a diverse range of structurally related DNA repair proteins. The superfamily is called the HhH-GPD family after its hallmark Helix-hairpin-helix and Gly/Pro rich loop followed by a conserved aspartate. This includes endonuclease III, EC:4.2.99.18 and MutY an A/G-specific adenine glycosylase, both have a C terminal 4Fe-4S cluster. The family also includes 8-oxoguanine DNA glycosylases. The methyl-CPG binding protein MBD4 also contains a related domain that is a thymine DNA glycosylase. The family also includes DNA-3-methyladenine glycosylase II EC:3.2.2.21 and other members of the AlkA family.
Pssm-ID: 425841 [Multi-domain] Cd Length: 141 Bit Score: 143.96 E-value: 7.04e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 126 LSLMLSSQTKDQVTAGAMQRLRAR-GLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVAELV 204
Cdd:pfam00730 1 VSAILSQQTSDKAVNKITERLFEKfFPTPEDLADADEEELRELIRGLGFYRRKAKYLKELARILVEGYGGEVPLDEEELE 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1514769207 205 A-LPGVGPKMAHLAMAVAWG-TVSGIAVDTHVHRIANRLRWTkKATKSPEETRAALEEWLPR 264
Cdd:pfam00730 81 AlLKGVGRWTAEAVLIFALGrPDPLPVVDTHVRRVLKRLGLI-KEKPTPKEVERELEELWPP 141
|
|
| PRK10702 |
PRK10702 |
endonuclease III; Provisional |
122-298 |
6.81e-24 |
|
endonuclease III; Provisional
Pssm-ID: 182661 [Multi-domain] Cd Length: 211 Bit Score: 96.62 E-value: 6.81e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 122 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVA 201
Cdd:PRK10702 30 FELLIAVLLSAQATDVSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENVIKTCRILLEQHNGEVPEDRA 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 202 ELVALPGVGPKMAHLAMAVAWGTVSgIAVDTHVHRIANRLRWTkkATKSPEETRAALEEWLPRELWHEINGLLVGFGQQT 281
Cdd:PRK10702 110 ALEALPGVGRKTANVVLNTAFGWPT-IAVDTHIFRVCNRTQFA--PGKNVEQVEEKLLKVVPAEFKVDCHHWLILHGRYT 186
|
170
....*....|....*..
gi 1514769207 282 CLPVHPRCHACLNQALC 298
Cdd:PRK10702 187 CIARKPRCGSCIIEDLC 203
|
|
| HP0602 |
COG2231 |
3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily [Replication, recombination and ... |
142-302 |
1.06e-20 |
|
3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily [Replication, recombination and repair];
Pssm-ID: 441832 [Multi-domain] Cd Length: 220 Bit Score: 88.36 E-value: 1.06e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 142 AMQRLRARG-LTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDI------PASV--AELVALPGVGPK 212
Cdd:COG2231 50 AIANLKEAGlLDPEALAALDPEELAELIRPSGFYNQKAKRLKNLARWLVERYGGGLeklkalPTEElrEELLSLKGIGPE 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 213 mahlamavawgTVSGIA----------VDTHVHRIANRLRWTKKaTKSPEETRAALEEWLPR--ELWHEINGLLVGFGQQ 280
Cdd:COG2231 130 -----------TADSILlyafnrpvfvVDAYTRRIFSRLGLIEE-DASYDELQRLFEENLPPdvALYNEFHALIVEHGKE 197
|
170 180
....*....|....*....|..
gi 1514769207 281 TCLPVhPRCHACLNQALCPAAQ 302
Cdd:COG2231 198 YCKKK-PKCEECPLRDLCPYGG 218
|
|
| HHH |
pfam00633 |
Helix-hairpin-helix motif; The helix-hairpin-helix DNA-binding motif is found to be duplicated ... |
191-215 |
3.41e-07 |
|
Helix-hairpin-helix motif; The helix-hairpin-helix DNA-binding motif is found to be duplicated in the central domain of RuvA. The HhH domain of DisA, a bacterial checkpoint control protein, is a DNA-binding domain.
Pssm-ID: 425789 [Multi-domain] Cd Length: 30 Bit Score: 45.87 E-value: 3.41e-07
|
| AlkA |
COG0122 |
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [Replication, recombination and ... |
152-261 |
4.26e-04 |
|
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [Replication, recombination and repair];
Pssm-ID: 439892 [Multi-domain] Cd Length: 255 Bit Score: 41.02 E-value: 4.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 152 TVDSILQTDDATLGKLiypvGFWRSKVKYIKQTSAILQQH-------YGGDIPASVAELVALPGVGPKMAHLAMAVAWG- 223
Cdd:COG0122 129 TPEALAAASEEELRAC----GLSRRKARYLRALARAVADGeldlealAGLDDEEAIARLTALPGIGPWTAEMVLLFALGr 204
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1514769207 224 --TVSgiAVDTHVHRIANRLRWTKKATkSPEETRAALEEW 261
Cdd:COG0122 205 pdAFP--AGDLGLRRALGRLYGLGERP-TPKELRELAEPW 241
|
|
| FES |
smart00525 |
iron-sulpphur binding domain in DNA-(apurinic or apyrimidinic site) lyase (subfamily of ENDO3); ... |
281-301 |
6.23e-04 |
|
iron-sulpphur binding domain in DNA-(apurinic or apyrimidinic site) lyase (subfamily of ENDO3);
Pssm-ID: 197771 [Multi-domain] Cd Length: 21 Bit Score: 36.37 E-value: 6.23e-04
|
| ogg |
TIGR00588 |
8-oxoguanine DNA-glycosylase (ogg); All proteins in this family for which functions are known ... |
177-272 |
8.40e-04 |
|
8-oxoguanine DNA-glycosylase (ogg); All proteins in this family for which functions are known are 8-oxo-guanaine DNA glycosylases that function in base excision repair. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). This family is distantly realted to the Nth-MutY superfamily. [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 211589 [Multi-domain] Cd Length: 310 Bit Score: 40.28 E-value: 8.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 177 KVKYIKQTS----------AILQQHYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANR---LRW 243
Cdd:TIGR00588 186 RARYIRETAralleeqggrAWLQQIRGASYEDAREALCELPGVGPKVADCICLMGLDKPQAVPVDVHVWRIANRdypWHP 265
|
90 100
....*....|....*....|....*....
gi 1514769207 244 TKKATKSPEETRAALEEWLPRELWHEING 272
Cdd:TIGR00588 266 KTSRAKGPSPFARKELGNFFRSLWGPYAG 294
|
|
| MutY |
COG1194 |
Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs [Replication, recombination and ... |
187-292 |
4.58e-03 |
|
Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs [Replication, recombination and repair];
Pssm-ID: 440807 [Multi-domain] Cd Length: 350 Bit Score: 38.20 E-value: 4.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1514769207 187 ILQQHYGGDIPASVAELVALPGVGPKMAHLAMAVAWGtVSGIAVDTHVHRIANRLRwtkkatkspeetraALEEWLP--- 263
Cdd:COG1194 94 QVVEEHGGVFPDTYEELLALPGIGPYTAAAIASIAFG-EPAPIVDGNVKRVLSRLF--------------AIEGPIGspa 158
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1514769207 264 --RELWHEINGLL----VG--------FGQQTCLPVHPRCHAC 292
Cdd:COG1194 159 akKELWALAEELLpperPGdfnqalmdLGATVCTPKKPKCLLC 201
|
|
|