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Conserved domains on  [gi|51873036|ref|NP_002532|]
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2-oxoglutarate dehydrogenase complex component E1 isoform 1 precursor [Homo sapiens]

Protein Classification

2-oxoglutarate dehydrogenase family protein( domain architecture ID 11426267)

2-oxoglutarate dehydrogenase family protein, such as 2-oxoglutarate dehydrogenase subunit E1 that catalyzes the decarboxylation of 2-oxoglutarate and the formation of TPP-hydroxysuccinate

EC:  1.2.4.2
Gene Ontology:  GO:0004591|GO:0030976
PubMed:  24077172|12631263
SCOP:  3001790

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
SucA COG0567
2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes ...
49-1016 0e+00

2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion]; 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes is part of the Pathway/BioSystem: TCA cycle


:

Pssm-ID: 440333 [Multi-domain]  Cd Length: 935  Bit Score: 1322.77  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   49 FLSGTSSNYVEEMYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLPLSRGSLAAVAHAQSLVEAQpnVDKLVEDHL 128
Cdd:COG0567   11 FLSGANAAYIEELYEQYLEDPDSVDPSWRAFFDGLPDVPGARDFAHSPIREEFRKLAKNGAGAAASAAA--DPEAARKQV 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  129 AVQSLIRAYQIRGHHVAQLDPLGILD----ADLDssvpadiisstdkLGFYGLDESDLDKVFHlpTTTFIGGQEsaLPLR 204
Cdd:COG0567   89 RVLQLINAYRVRGHLFAKLDPLGLRErpyvPELD-------------PAFYGLTEADLDTVFN--TGSLLGLET--ATLR 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  205 EIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETP-GIMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKRFGLEGC 283
Cdd:COG0567  152 EIIAALKETYCGSIGVEYMHISDPEEKRWIQERLESTrNRPSFSAEEKKRILEKLTAAEGFEKFLHTKYVGQKRFSLEGG 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  284 EVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGmYHRriNRVTD 363
Cdd:COG0567  232 ESLIPALDELIERAGELGVKEIVIGMAHRGRLNVLVNILGKPPRDIFSEFEGKSAEDVLGSGDVKYHLG-FSS--DVETP 308
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  364 -RNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVV 442
Cdd:COG0567  309 gGKVHLSLAFNPSHLEIVNPVVEGSVRARQDRRGDTDRDKVLPILIHGDAAFAGQGVVYETLNMSQLRGYRTGGTIHIVI 388
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  443 NNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFT 522
Cdd:COG0567  389 NNQIGFTTSPRDARSSTYCTDVAKMVQAPIFHVNGDDPEAVVFVARLALDYRQKFKKDVVIDLVCYRRHGHNEGDEPAFT 468
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  523 QPLMYKQIRKQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFARSKdEKILHIKHWLDSPWPGFFTLdGQPRSM 602
Cdd:COG0567  469 QPLMYKKIKKHPTTREIYADKLVAEGVITAEEADEMVDEYRAALDEGFEVVK-EYKPNKADWLEGDWSPYRRL-GEDWDD 546
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  603 SCPsTGLTEDILTHIGNVASSVPvENFTIHGGLSRILKTRGEMV-KNRTVDWALAEYMAFGSLLKEGIHIRLSGQDVERG 681
Cdd:COG0567  547 PVD-TGVPLEKLKELGEKLTTLP-EGFKLHPKVEKILEDRRKMAeGEKPLDWGMAEALAYASLLDEGYPVRLSGQDSGRG 624
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  682 TFSHRHHVLHDQNvDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQF 761
Cdd:COG0567  625 TFSHRHAVLHDQK-TGETYVPLNHLSEGQARFEVYNSLLSEEAVLGFEYGYALAEPNTLVIWEAQFGDFANGAQVVIDQF 703
                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  762 ICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDpdvlpdlkeanfdinqlydcNWVVVNCSTPGNFFHV 841
Cdd:COG0567  704 ISSGESKWGRLSGLVMLLPHGYEGQGPEHSSARLERFLQLCAED--------------------NMQVCNPTTPAQYFHL 763
                        810       820       830       840       850       860       870       880
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  842 LRRQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGtHFQRVIPEDGPAaqNPENVKRLLFCTGKVYYDLT---RERKA 918
Cdd:COG0567  764 LRRQMKRPFRKPLIVMTPKSLLRHKLAVSSLEELAEG-SFQEVIDDTDEL--DPKKVKRVVLCSGKVYYDLLeerRERGR 840
                        890       900       910       920       930       940       950       960
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  919 RDmvgqVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKNQGYYDYVKPRLRTTISRAKPVWYAGRDPAAAPATG 997
Cdd:COG0567  841 DD----VAIVRIEQLYPFPEEELAAELAKYPNAkEVVWCQEEPKNMGAWYFIQHRLEEVLPKGQRLRYAGRPASASPATG 916
                        970
                 ....*....|....*....
gi 51873036  998 NKKTHLTELQRLLDTAFDL 1016
Cdd:COG0567  917 YMSVHKAEQKALVEEALGI 935
 
Name Accession Description Interval E-value
SucA COG0567
2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes ...
49-1016 0e+00

2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion]; 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440333 [Multi-domain]  Cd Length: 935  Bit Score: 1322.77  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   49 FLSGTSSNYVEEMYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLPLSRGSLAAVAHAQSLVEAQpnVDKLVEDHL 128
Cdd:COG0567   11 FLSGANAAYIEELYEQYLEDPDSVDPSWRAFFDGLPDVPGARDFAHSPIREEFRKLAKNGAGAAASAAA--DPEAARKQV 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  129 AVQSLIRAYQIRGHHVAQLDPLGILD----ADLDssvpadiisstdkLGFYGLDESDLDKVFHlpTTTFIGGQEsaLPLR 204
Cdd:COG0567   89 RVLQLINAYRVRGHLFAKLDPLGLRErpyvPELD-------------PAFYGLTEADLDTVFN--TGSLLGLET--ATLR 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  205 EIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETP-GIMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKRFGLEGC 283
Cdd:COG0567  152 EIIAALKETYCGSIGVEYMHISDPEEKRWIQERLESTrNRPSFSAEEKKRILEKLTAAEGFEKFLHTKYVGQKRFSLEGG 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  284 EVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGmYHRriNRVTD 363
Cdd:COG0567  232 ESLIPALDELIERAGELGVKEIVIGMAHRGRLNVLVNILGKPPRDIFSEFEGKSAEDVLGSGDVKYHLG-FSS--DVETP 308
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  364 -RNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVV 442
Cdd:COG0567  309 gGKVHLSLAFNPSHLEIVNPVVEGSVRARQDRRGDTDRDKVLPILIHGDAAFAGQGVVYETLNMSQLRGYRTGGTIHIVI 388
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  443 NNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFT 522
Cdd:COG0567  389 NNQIGFTTSPRDARSSTYCTDVAKMVQAPIFHVNGDDPEAVVFVARLALDYRQKFKKDVVIDLVCYRRHGHNEGDEPAFT 468
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  523 QPLMYKQIRKQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFARSKdEKILHIKHWLDSPWPGFFTLdGQPRSM 602
Cdd:COG0567  469 QPLMYKKIKKHPTTREIYADKLVAEGVITAEEADEMVDEYRAALDEGFEVVK-EYKPNKADWLEGDWSPYRRL-GEDWDD 546
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  603 SCPsTGLTEDILTHIGNVASSVPvENFTIHGGLSRILKTRGEMV-KNRTVDWALAEYMAFGSLLKEGIHIRLSGQDVERG 681
Cdd:COG0567  547 PVD-TGVPLEKLKELGEKLTTLP-EGFKLHPKVEKILEDRRKMAeGEKPLDWGMAEALAYASLLDEGYPVRLSGQDSGRG 624
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  682 TFSHRHHVLHDQNvDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQF 761
Cdd:COG0567  625 TFSHRHAVLHDQK-TGETYVPLNHLSEGQARFEVYNSLLSEEAVLGFEYGYALAEPNTLVIWEAQFGDFANGAQVVIDQF 703
                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  762 ICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDpdvlpdlkeanfdinqlydcNWVVVNCSTPGNFFHV 841
Cdd:COG0567  704 ISSGESKWGRLSGLVMLLPHGYEGQGPEHSSARLERFLQLCAED--------------------NMQVCNPTTPAQYFHL 763
                        810       820       830       840       850       860       870       880
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  842 LRRQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGtHFQRVIPEDGPAaqNPENVKRLLFCTGKVYYDLT---RERKA 918
Cdd:COG0567  764 LRRQMKRPFRKPLIVMTPKSLLRHKLAVSSLEELAEG-SFQEVIDDTDEL--DPKKVKRVVLCSGKVYYDLLeerRERGR 840
                        890       900       910       920       930       940       950       960
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  919 RDmvgqVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKNQGYYDYVKPRLRTTISRAKPVWYAGRDPAAAPATG 997
Cdd:COG0567  841 DD----VAIVRIEQLYPFPEEELAAELAKYPNAkEVVWCQEEPKNMGAWYFIQHRLEEVLPKGQRLRYAGRPASASPATG 916
                        970
                 ....*....|....*....
gi 51873036  998 NKKTHLTELQRLLDTAFDL 1016
Cdd:COG0567  917 YMSVHKAEQKALVEEALGI 935
sucA PRK09404
2-oxoglutarate dehydrogenase E1 component; Reviewed
49-1015 0e+00

2-oxoglutarate dehydrogenase E1 component; Reviewed


Pssm-ID: 236499 [Multi-domain]  Cd Length: 924  Bit Score: 1275.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    49 FLSGTSSNYVEEMYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAyqsplplsrgsLAAVAHAQSLVEAQPNVDKLVEDHL 128
Cdd:PRK09404   13 FLFGANAAYIEELYEQYLKDPDSVDEEWRAFFDGLPGVAPDVAH-----------SAVRESFRRLAKPARVSSAVSDPQV 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   129 AVQSLIRAYQIRGHHVAQLDPLGIL----DADLDssvpadiisstdkLGFYGLDESDLDKVFHlpTTTFIGGQESAlPLR 204
Cdd:PRK09404   82 KVLQLINAYRFRGHLAANLDPLGLWkrpdVPELD-------------PAFYGLTEADLDRTFN--TGSLALGKETA-TLR 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   205 EIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPGImQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKRFGLEGCE 284
Cdd:PRK09404  146 EIIEALKKTYCGSIGVEYMHISDPEERRWLQQRIESGRP-SFSAEEKKAILERLTAAEGFERFLHTKFVGQKRFSLEGGE 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   285 VLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAAD-EGSGDVKYHLGmYHRriNRVTD 363
Cdd:PRK09404  225 SLIPMLDEIIRRAGKLGVKEIVIGMAHRGRLNVLVNVLGKPPRDLFAEFEGKHGPDEvLGSGDVKYHLG-FSS--DRETD 301
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   364 -RNITLSLVANPSHLEAADPVVMGKTKAEQFYCGD-TEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVV 441
Cdd:PRK09404  302 gGEVHLSLAFNPSHLEIVNPVVEGSVRARQDRRGDgQDRKKVLPILIHGDAAFAGQGVVAETLNLSQLRGYRTGGTIHIV 381
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   442 VNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMF 521
Cdd:PRK09404  382 INNQIGFTTSPPDDRSTPYCTDVAKMVQAPIFHVNGDDPEAVVFATRLALEYRQKFKKDVVIDLVCYRRHGHNEGDEPSF 461
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   522 TQPLMYKQIRKQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFARSKDEKilhIKHWLDSPWPGFFTLDGQPRs 601
Cdd:PRK09404  462 TQPLMYKKIKKHPTTRELYADKLVAEGVITEEEADEMVNEYRDALDAGFEVVKEWR---PADWLAGDWSPYLGHEWDDP- 537
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   602 mscPSTGLTEDILTHIGNVASSVPvENFTIHGGLSRILKTRGEMVK-NRTVDWALAEYMAFGSLLKEGIHIRLSGQDVER 680
Cdd:PRK09404  538 ---VDTGVPLERLKELAEKLTTVP-EGFKVHPKVKKILEDRREMAEgEKPIDWGMAEALAFASLLDEGYPVRLSGQDSGR 613
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   681 GTFSHRHHVLHDQNvDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQ 760
Cdd:PRK09404  614 GTFSHRHAVLHDQK-TGETYIPLNHLSEGQASFEVYDSPLSEEAVLGFEYGYSTAEPNTLVIWEAQFGDFANGAQVVIDQ 692
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   761 FICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDpdvlpdlkeanfdinqlydcNWVVVNCSTPGNFFH 840
Cdd:PRK09404  693 FISSGEQKWGRLSGLVMLLPHGYEGQGPEHSSARLERFLQLCAED--------------------NMQVCNPTTPAQYFH 752
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   841 VLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGThFQRVIPEdgPAAQNPENVKRLLFCTGKVYYDLTRERKARD 920
Cdd:PRK09404  753 LLRRQALRPFRKPLVVMTPKSLLRHPLAVSSLEELAEGS-FQPVIGD--IDELDPKKVKRVVLCSGKVYYDLLEARRKRG 829
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   921 mVGQVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKNQGYYDYVKPRLRTTISRAKPVWYAGRDPAAAPATGNK 999
Cdd:PRK09404  830 -IDDVAIVRIEQLYPFPHEELAAELAKYPNAkEVVWCQEEPKNQGAWYFIQHHLEEVLPEGQKLRYAGRPASASPAVGYM 908
                         970
                  ....*....|....*.
gi 51873036  1000 KTHLTELQRLLDTAFD 1015
Cdd:PRK09404  909 SLHKKQQEALVEDALG 924
2oxo_dh_E1 TIGR00239
2-oxoglutarate dehydrogenase, E1 component; The 2-oxoglutarate dehydrogenase complex consists ...
49-1014 0e+00

2-oxoglutarate dehydrogenase, E1 component; The 2-oxoglutarate dehydrogenase complex consists of this thiamine pyrophosphate-binding subunit (E1), dihydrolipoamide succinyltransferase (E2), and lipoamide dehydrogenase (E3). The E1 ortholog from Corynebacterium glutamicum is unusual in having an N-terminal extension that resembles the dihydrolipoamide succinyltransferase (E2) component of 2-oxoglutarate dehydrogenase. [Energy metabolism, TCA cycle]


Pssm-ID: 161785 [Multi-domain]  Cd Length: 929  Bit Score: 992.84  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036     49 FLSGTSSNYVEEMYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLPLSRGSLAAVAHAQSLVEAQPnvDKLVEDHL 128
Cdd:TIGR00239    1 YLSGANQSYIEELYEDYLTDPDSVDASWRSTFDQLPGPGPAPDQFHSPTRSYFRRLAKDASRGSVTISDP--DTNVSQVK 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    129 AVQsLIRAYQIRGHHVAQLDPLGILDADldssVPADIisstdKLGFYGLDESDLDKVFHLPTTTFIGGQESALPLREIIR 208
Cdd:TIGR00239   79 VLQ-LIRAYRFRGHLHANLDPLGLKQQD----KVPEL-----DLSFYGLTEADLQETFNIGSFVSGKDATMKLSNLELLQ 148
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    209 RLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPGIMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKRFGLEGCEVLIP 288
Cdd:TIGR00239  149 ALKQTYCGSIGAEYMHITSTEEKRWLQQRIESGERAQFNSEEKKRFLSRLTAAEGFERFLGAKFPGAKRFSLEGLDALVP 228
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    289 ALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAAD-EGSGDVKYHLGMYHRRINrVTDRNIT 367
Cdd:TIGR00239  229 MLKEIIRHSVNSGTRDVVLGMAHRGRLNVLVNVLGKPPEDIFSEFAGKHKSHLpDGTGDVKYHMGRFSSDFT-TDGKLVH 307
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    368 LSLVANPSHLEAADPVVMGKTKAEQFYCGD-TEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQI 446
Cdd:TIGR00239  308 LALAFNPSHLEIVSPVVIGSTRARLDRLNDsPESTKVLAILIHGDAAFAGQGVVQETLNMSKLRGYSVGGTIHIIINNQI 387
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    447 GFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLM 526
Cdd:TIGR00239  388 GFTTNPLDARSTPYCSDLAKMIQAPIFHVNADDPEAVAFATRLAVEYRNTFKRDVFIDLVGYRRHGHNEADEPSATQPLM 467
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    527 YKQIRKQKPVLQKYAELLVSQGVVNqpeyEEEISKYDKICEEAFARSKDeKILHIKHWLDSPWPGFFTLDgQPRSMSCPS 606
Cdd:TIGR00239  468 YQKIKKHPTPRKVYADKLVSEGVAT----EEDVTEMVNLYRDALEAADC-VVPSWREMNTASFTWSPELN-HEWDEEYPN 541
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    607 TgLTEDILTHIGNVASSVPvENFTIHGGLSRILKTRGEMVK--NRTVDWALAEYMAFGSLLKEGIHIRLSGQDVERGTFS 684
Cdd:TIGR00239  542 K-VEMKRLQELAKRISEVP-EGVEMHSRVAKIYFDRTKAMAagEKLFDWGGAENLAFATLVDDGIPVRLSGEDSERGTFF 619
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    685 HRHHVLHDQNvDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFICP 764
Cdd:TIGR00239  620 QRHAVLHDQS-NGSTYTPLQHLHNGQGAFRVWNSVLSEESVLGFEYGYATTSPRTLVIWEAQFGDFANGAQVVIDQFISS 698
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    765 GQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDpdvlpdlkeanfdinqlydcNWVVVNCSTPGNFFHVLRR 844
Cdd:TIGR00239  699 GEQKWGQMSGLVMLLPHGYEGQGPEHSSGRLERFLQLAAEQ--------------------NMQVCVPTTPAQVFHILRR 758
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    845 QILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGThFQRVIP--EDGPAAQNPENVKRLLFCTGKVYYDLtRERKARDMV 922
Cdd:TIGR00239  759 QALRGMRRPLVVMSPKSLLRHPLAVSSLEELAEGT-FQPVIGeiEESGLSLDPEGVKRLVLCSGKVYYDL-HEQRRKNGQ 836
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    923 GQVAITRIEQLSPFPFDLLLKEVQKYPN-AELAWCQEEHKNQGYYDYVKPRLRTTISRAKPVWYAGRDPAAAPATGNKKT 1001
Cdd:TIGR00239  837 KDVAIVRIEQLYPFPHKAVKEVLQQYPNlKEIVWCQEEPLNMGAWYYSQPHLREVIPEGVSVRYAGRPASASPAVGYMSL 916
                          970
                   ....*....|...
gi 51873036   1002 HLTELQRLLDTAF 1014
Cdd:TIGR00239  917 HQKQQQDLLNDAL 929
TPP_E1_OGDC_like cd02016
Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed ...
264-527 1.25e-179

Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC). OGDC catalyzes the oxidative decarboxylation of 2-oxoglutarate to succinyl-CoA and carbon dioxide, a key reaction of the tricarboxylic acid cycle.


Pssm-ID: 238974 [Multi-domain]  Cd Length: 265  Bit Score: 522.47  E-value: 1.25e-179
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  264 FEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAAD-- 341
Cdd:cd02016    1 FEQFLATKFPGQKRFGLEGAESLIPALDELIDRAAELGVEEVVIGMAHRGRLNVLANVLGKPLEQIFSEFEGKSEFPEdd 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  342 EGSGDVKYHLGMYHRRINRVtDRNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVY 421
Cdd:cd02016   81 EGSGDVKYHLGYSSDRKTPS-GKKVHLSLAPNPSHLEAVNPVVMGKTRAKQDYRGDGERDKVLPILIHGDAAFAGQGVVY 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  422 ETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDV 501
Cdd:cd02016  160 ETLNLSNLPGYTTGGTIHIVVNNQIGFTTDPRDSRSSPYCTDVAKMIGAPIFHVNGDDPEAVVRATRLALEYRQKFKKDV 239
                        250       260
                 ....*....|....*....|....*.
gi 51873036  502 VVDLVCYRRNGHNEMDEPMFTQPLMY 527
Cdd:cd02016  240 VIDLVCYRRHGHNELDEPSFTQPLMY 265
E1_dh pfam00676
Dehydrogenase E1 component; This family uses thiamine pyrophosphate as a cofactor. This family ...
256-582 7.07e-112

Dehydrogenase E1 component; This family uses thiamine pyrophosphate as a cofactor. This family includes pyruvate dehydrogenase, 2-oxoglutarate dehydrogenase and 2-oxoisovalerate dehydrogenase.


Pssm-ID: 395548 [Multi-domain]  Cd Length: 300  Bit Score: 348.16  E-value: 7.07e-112
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    256 ARLVRSTRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSENGvDYVIMGmpHRGRLNVLANVIRkeLEQIFCQFDS 335
Cdd:pfam00676    1 RRMMTLRRMEDARDALYKRQGIRGFYHLYAGQEAAQVGIAAALEPG-DYIIPG--YRDHGNLLARGLS--LEEIFAELYG 75
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    336 KLEaadEGSGDVKYhlGMYHRRINRVTDRNITLSLVANpshlEAADPVVMGKTkaeqfycgdtEGKKVMSILLHGDAAfA 415
Cdd:pfam00676   76 RVA---KGKGGSMH--GYYGAKGNRFYGGNGILGAQVP----LGAGIALAAKY----------RGKKEVAITLYGDGA-A 135
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    416 GQGIVYETFHLSDLPSYTThgtVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRS 495
Cdd:pfam00676  136 NQGDFFEGLNFAALWKLPV---IFVCENNQYGISTPAERASASTTYADRARGYGIPGLHVDGMDPLAVYQASKFAAERAR 212
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    496 TFHKDVVVDLVCYRRNGHNEMDEPMFTQ-PLMYKQIRKQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFARSK 574
Cdd:pfam00676  213 TGKGPFLIELVTYRYGGHSMSDDPSTYRtRDEYEEVRKKKDPIQRFKEHLVSKGVWSEEELKAIEKEVRKEVEEAFKKAE 292

                   ....*...
gi 51873036    575 DEKILHIK 582
Cdd:pfam00676  293 SAPEPHPE 300
Transket_pyr smart00861
Transketolase, pyrimidine binding domain; Transketolase (TK) catalyzes the reversible transfer ...
717-864 4.19e-22

Transketolase, pyrimidine binding domain; Transketolase (TK) catalyzes the reversible transfer of a two-carbon ketol unit from xylulose 5-phosphate to an aldose receptor, such as ribose 5-phosphate, to form sedoheptulose 7-phosphate and glyceraldehyde 3- phosphate. This enzyme, together with transaldolase, provides a link between the glycolytic and pentose-phosphate pathways. TK requires thiamine pyrophosphate as a cofactor. In most sources where TK has been purified, it is a homodimer of approximately 70 Kd subunits. TK sequences from a variety of eukaryotic and prokaryotic sources show that the enzyme has been evolutionarily conserved. In the peroxisomes of methylotrophic yeast Hansenula polymorpha, there is a highly related enzyme, dihydroxy-acetone synthase (DHAS) (also known as formaldehyde transketolase), which exhibits a very unusual specificity by including formaldehyde amongst its substrates.


Pssm-ID: 214865 [Multi-domain]  Cd Length: 136  Bit Score: 92.93  E-value: 4.19e-22
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036     717 NSSLSEYGVLGFELGFAMAspnALVLWEAQFGDFHNTAQCIIDQFICpgqakWVRQNGIVLLLPHGMEGM-GPEHSSARP 795
Cdd:smart00861   19 DTGIAEQAMVGFAAGLALH---GLRPVVEIFFTFFDRAKDQIRSAGA-----SGNVPVVFRHDGGGGVGEdGPTHHSIED 90
                            90       100       110       120       130       140       150
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036     796 E-RFLQMcnddpdvlpdlkeanfdinqlydCNWVVVNCSTPGNFFHVLRRQILLPfRKPLIIFTPKSLLR 864
Cdd:smart00861   91 EaLLRAI-----------------------PGLKVVAPSDPAEAKGLLRAAIRDD-GPVVIRLERKSLYR 136
 
Name Accession Description Interval E-value
SucA COG0567
2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes ...
49-1016 0e+00

2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion]; 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440333 [Multi-domain]  Cd Length: 935  Bit Score: 1322.77  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   49 FLSGTSSNYVEEMYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLPLSRGSLAAVAHAQSLVEAQpnVDKLVEDHL 128
Cdd:COG0567   11 FLSGANAAYIEELYEQYLEDPDSVDPSWRAFFDGLPDVPGARDFAHSPIREEFRKLAKNGAGAAASAAA--DPEAARKQV 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  129 AVQSLIRAYQIRGHHVAQLDPLGILD----ADLDssvpadiisstdkLGFYGLDESDLDKVFHlpTTTFIGGQEsaLPLR 204
Cdd:COG0567   89 RVLQLINAYRVRGHLFAKLDPLGLRErpyvPELD-------------PAFYGLTEADLDTVFN--TGSLLGLET--ATLR 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  205 EIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETP-GIMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKRFGLEGC 283
Cdd:COG0567  152 EIIAALKETYCGSIGVEYMHISDPEEKRWIQERLESTrNRPSFSAEEKKRILEKLTAAEGFEKFLHTKYVGQKRFSLEGG 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  284 EVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGmYHRriNRVTD 363
Cdd:COG0567  232 ESLIPALDELIERAGELGVKEIVIGMAHRGRLNVLVNILGKPPRDIFSEFEGKSAEDVLGSGDVKYHLG-FSS--DVETP 308
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  364 -RNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVV 442
Cdd:COG0567  309 gGKVHLSLAFNPSHLEIVNPVVEGSVRARQDRRGDTDRDKVLPILIHGDAAFAGQGVVYETLNMSQLRGYRTGGTIHIVI 388
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  443 NNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFT 522
Cdd:COG0567  389 NNQIGFTTSPRDARSSTYCTDVAKMVQAPIFHVNGDDPEAVVFVARLALDYRQKFKKDVVIDLVCYRRHGHNEGDEPAFT 468
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  523 QPLMYKQIRKQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFARSKdEKILHIKHWLDSPWPGFFTLdGQPRSM 602
Cdd:COG0567  469 QPLMYKKIKKHPTTREIYADKLVAEGVITAEEADEMVDEYRAALDEGFEVVK-EYKPNKADWLEGDWSPYRRL-GEDWDD 546
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  603 SCPsTGLTEDILTHIGNVASSVPvENFTIHGGLSRILKTRGEMV-KNRTVDWALAEYMAFGSLLKEGIHIRLSGQDVERG 681
Cdd:COG0567  547 PVD-TGVPLEKLKELGEKLTTLP-EGFKLHPKVEKILEDRRKMAeGEKPLDWGMAEALAYASLLDEGYPVRLSGQDSGRG 624
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  682 TFSHRHHVLHDQNvDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQF 761
Cdd:COG0567  625 TFSHRHAVLHDQK-TGETYVPLNHLSEGQARFEVYNSLLSEEAVLGFEYGYALAEPNTLVIWEAQFGDFANGAQVVIDQF 703
                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  762 ICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDpdvlpdlkeanfdinqlydcNWVVVNCSTPGNFFHV 841
Cdd:COG0567  704 ISSGESKWGRLSGLVMLLPHGYEGQGPEHSSARLERFLQLCAED--------------------NMQVCNPTTPAQYFHL 763
                        810       820       830       840       850       860       870       880
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  842 LRRQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGtHFQRVIPEDGPAaqNPENVKRLLFCTGKVYYDLT---RERKA 918
Cdd:COG0567  764 LRRQMKRPFRKPLIVMTPKSLLRHKLAVSSLEELAEG-SFQEVIDDTDEL--DPKKVKRVVLCSGKVYYDLLeerRERGR 840
                        890       900       910       920       930       940       950       960
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  919 RDmvgqVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKNQGYYDYVKPRLRTTISRAKPVWYAGRDPAAAPATG 997
Cdd:COG0567  841 DD----VAIVRIEQLYPFPEEELAAELAKYPNAkEVVWCQEEPKNMGAWYFIQHRLEEVLPKGQRLRYAGRPASASPATG 916
                        970
                 ....*....|....*....
gi 51873036  998 NKKTHLTELQRLLDTAFDL 1016
Cdd:COG0567  917 YMSVHKAEQKALVEEALGI 935
sucA PRK09404
2-oxoglutarate dehydrogenase E1 component; Reviewed
49-1015 0e+00

2-oxoglutarate dehydrogenase E1 component; Reviewed


Pssm-ID: 236499 [Multi-domain]  Cd Length: 924  Bit Score: 1275.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    49 FLSGTSSNYVEEMYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAyqsplplsrgsLAAVAHAQSLVEAQPNVDKLVEDHL 128
Cdd:PRK09404   13 FLFGANAAYIEELYEQYLKDPDSVDEEWRAFFDGLPGVAPDVAH-----------SAVRESFRRLAKPARVSSAVSDPQV 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   129 AVQSLIRAYQIRGHHVAQLDPLGIL----DADLDssvpadiisstdkLGFYGLDESDLDKVFHlpTTTFIGGQESAlPLR 204
Cdd:PRK09404   82 KVLQLINAYRFRGHLAANLDPLGLWkrpdVPELD-------------PAFYGLTEADLDRTFN--TGSLALGKETA-TLR 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   205 EIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPGImQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKRFGLEGCE 284
Cdd:PRK09404  146 EIIEALKKTYCGSIGVEYMHISDPEERRWLQQRIESGRP-SFSAEEKKAILERLTAAEGFERFLHTKFVGQKRFSLEGGE 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   285 VLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAAD-EGSGDVKYHLGmYHRriNRVTD 363
Cdd:PRK09404  225 SLIPMLDEIIRRAGKLGVKEIVIGMAHRGRLNVLVNVLGKPPRDLFAEFEGKHGPDEvLGSGDVKYHLG-FSS--DRETD 301
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   364 -RNITLSLVANPSHLEAADPVVMGKTKAEQFYCGD-TEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVV 441
Cdd:PRK09404  302 gGEVHLSLAFNPSHLEIVNPVVEGSVRARQDRRGDgQDRKKVLPILIHGDAAFAGQGVVAETLNLSQLRGYRTGGTIHIV 381
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   442 VNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMF 521
Cdd:PRK09404  382 INNQIGFTTSPPDDRSTPYCTDVAKMVQAPIFHVNGDDPEAVVFATRLALEYRQKFKKDVVIDLVCYRRHGHNEGDEPSF 461
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   522 TQPLMYKQIRKQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFARSKDEKilhIKHWLDSPWPGFFTLDGQPRs 601
Cdd:PRK09404  462 TQPLMYKKIKKHPTTRELYADKLVAEGVITEEEADEMVNEYRDALDAGFEVVKEWR---PADWLAGDWSPYLGHEWDDP- 537
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   602 mscPSTGLTEDILTHIGNVASSVPvENFTIHGGLSRILKTRGEMVK-NRTVDWALAEYMAFGSLLKEGIHIRLSGQDVER 680
Cdd:PRK09404  538 ---VDTGVPLERLKELAEKLTTVP-EGFKVHPKVKKILEDRREMAEgEKPIDWGMAEALAFASLLDEGYPVRLSGQDSGR 613
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   681 GTFSHRHHVLHDQNvDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQ 760
Cdd:PRK09404  614 GTFSHRHAVLHDQK-TGETYIPLNHLSEGQASFEVYDSPLSEEAVLGFEYGYSTAEPNTLVIWEAQFGDFANGAQVVIDQ 692
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   761 FICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDpdvlpdlkeanfdinqlydcNWVVVNCSTPGNFFH 840
Cdd:PRK09404  693 FISSGEQKWGRLSGLVMLLPHGYEGQGPEHSSARLERFLQLCAED--------------------NMQVCNPTTPAQYFH 752
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   841 VLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGThFQRVIPEdgPAAQNPENVKRLLFCTGKVYYDLTRERKARD 920
Cdd:PRK09404  753 LLRRQALRPFRKPLVVMTPKSLLRHPLAVSSLEELAEGS-FQPVIGD--IDELDPKKVKRVVLCSGKVYYDLLEARRKRG 829
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   921 mVGQVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKNQGYYDYVKPRLRTTISRAKPVWYAGRDPAAAPATGNK 999
Cdd:PRK09404  830 -IDDVAIVRIEQLYPFPHEELAAELAKYPNAkEVVWCQEEPKNQGAWYFIQHHLEEVLPEGQKLRYAGRPASASPAVGYM 908
                         970
                  ....*....|....*.
gi 51873036  1000 KTHLTELQRLLDTAFD 1015
Cdd:PRK09404  909 SLHKKQQEALVEDALG 924
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
117-1016 0e+00

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 1021.75  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   117 QPNVDKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGI---LDADLDssvpadiisstdkLGFYGLDESDLDKVFhlPTTTF 193
Cdd:PRK12270  376 PADHEDEVDKNARVMELIHAYRVRGHLMADTDPLEYrqrSHPDLD-------------VLTHGLTLWDLDREF--PVGGF 440
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   194 iGGQESaLPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPgIMQFTNEEKRTLLARLVRSTRFEEFLQRKWS 273
Cdd:PRK12270  441 -GGKER-MKLRDILGVLRDSYCRTVGIEYMHIQDPEQRRWLQERVERP-HEKPTREEQKRILSKLNAAEAFETFLQTKYV 517
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   274 SEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLE-AADEGSGDVKYHLG 352
Cdd:PRK12270  518 GQKRFSLEGGESLIPLLDAVLDQAAEHGLDEVVIGMAHRGRLNVLANIVGKPYSQIFREFEGNLDpRSAQGSGDVKYHLG 597
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   353 ---MYHRrinrVTDRNITLSLVANPSHLEAADPVVMGKTKAEQFYCGD-TEGKKVMSILLHGDAAFAGQGIVYETFHLSD 428
Cdd:PRK12270  598 aegTFTQ----MFGDEIKVSLAANPSHLEAVDPVLEGIVRAKQDRLDKgEEGFTVLPILLHGDAAFAGQGVVAETLNLSQ 673
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   429 LPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCY 508
Cdd:PRK12270  674 LRGYRTGGTIHIVVNNQVGFTTAPESSRSSEYATDVAKMIQAPIFHVNGDDPEAVVRVARLAFEYRQRFHKDVVIDLVCY 753
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   509 RRNGHNEMDEPMFTQPLMYKQIRKQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFARSKDEKilhiKHwlDSP 588
Cdd:PRK12270  754 RRRGHNEGDDPSMTQPLMYDLIDAKRSVRKLYTEALIGRGDITVEEAEQALRDYQGQLERVFNEVREAE----KK--PPE 827
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   589 WPGFFTLDGQPrsMSCPSTGLTEDILTHIGNVASSVPvENFTIHGGLSRILKTRGEMVKNRTVDWALAEYMAFGSLLKEG 668
Cdd:PRK12270  828 PPESVESDQGP--PAGVDTAVSAEVLERIGDAHVNLP-EGFTVHPKLKPLLEKRREMAREGGIDWAFGELLAFGSLLLEG 904
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   669 IHIRLSGQDVERGTFSHRHHVLHDQNVDKRTCiPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFG 748
Cdd:PRK12270  905 TPVRLSGQDSRRGTFSQRHAVLIDRETGEEYT-PLQNLSDDQGKFLVYDSLLSEYAAMGFEYGYSVERPDALVLWEAQFG 983
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   749 DFHNTAQCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDpdvlpdlkeanfdinqlydcNWV 828
Cdd:PRK12270  984 DFANGAQTIIDEFISSGEAKWGQRSGVVLLLPHGYEGQGPDHSSARIERFLQLCAEG--------------------NMT 1043
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   829 VVNCSTPGNFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGThFQRVIPEdgPAAQNPENVKRLLFCTGKV 908
Cdd:PRK12270 1044 VAQPSTPANYFHLLRRQALSGPRRPLVVFTPKSMLRLKAAVSDVEDFTEGK-FRPVIDD--PTVDDGAKVRRVLLCSGKL 1120
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036   909 YYDLTRERKARDmVGQVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKNQGYYDYVKPRLRTTISRAKPVWYAG 987
Cdd:PRK12270 1121 YYDLAARREKDG-RDDTAIVRVEQLYPLPRAELREALARYPNAtEVVWVQEEPANQGAWPFMALNLPELLPDGRRLRRVS 1199
                         890       900
                  ....*....|....*....|....*....
gi 51873036   988 RDPAAAPATGNKKTHLTELQRLLDTAFDL 1016
Cdd:PRK12270 1200 RPASASPATGSAKVHAVEQQELLDEAFAR 1228
2oxo_dh_E1 TIGR00239
2-oxoglutarate dehydrogenase, E1 component; The 2-oxoglutarate dehydrogenase complex consists ...
49-1014 0e+00

2-oxoglutarate dehydrogenase, E1 component; The 2-oxoglutarate dehydrogenase complex consists of this thiamine pyrophosphate-binding subunit (E1), dihydrolipoamide succinyltransferase (E2), and lipoamide dehydrogenase (E3). The E1 ortholog from Corynebacterium glutamicum is unusual in having an N-terminal extension that resembles the dihydrolipoamide succinyltransferase (E2) component of 2-oxoglutarate dehydrogenase. [Energy metabolism, TCA cycle]


Pssm-ID: 161785 [Multi-domain]  Cd Length: 929  Bit Score: 992.84  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036     49 FLSGTSSNYVEEMYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLPLSRGSLAAVAHAQSLVEAQPnvDKLVEDHL 128
Cdd:TIGR00239    1 YLSGANQSYIEELYEDYLTDPDSVDASWRSTFDQLPGPGPAPDQFHSPTRSYFRRLAKDASRGSVTISDP--DTNVSQVK 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    129 AVQsLIRAYQIRGHHVAQLDPLGILDADldssVPADIisstdKLGFYGLDESDLDKVFHLPTTTFIGGQESALPLREIIR 208
Cdd:TIGR00239   79 VLQ-LIRAYRFRGHLHANLDPLGLKQQD----KVPEL-----DLSFYGLTEADLQETFNIGSFVSGKDATMKLSNLELLQ 148
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    209 RLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPGIMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKRFGLEGCEVLIP 288
Cdd:TIGR00239  149 ALKQTYCGSIGAEYMHITSTEEKRWLQQRIESGERAQFNSEEKKRFLSRLTAAEGFERFLGAKFPGAKRFSLEGLDALVP 228
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    289 ALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAAD-EGSGDVKYHLGMYHRRINrVTDRNIT 367
Cdd:TIGR00239  229 MLKEIIRHSVNSGTRDVVLGMAHRGRLNVLVNVLGKPPEDIFSEFAGKHKSHLpDGTGDVKYHMGRFSSDFT-TDGKLVH 307
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    368 LSLVANPSHLEAADPVVMGKTKAEQFYCGD-TEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQI 446
Cdd:TIGR00239  308 LALAFNPSHLEIVSPVVIGSTRARLDRLNDsPESTKVLAILIHGDAAFAGQGVVQETLNMSKLRGYSVGGTIHIIINNQI 387
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    447 GFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLM 526
Cdd:TIGR00239  388 GFTTNPLDARSTPYCSDLAKMIQAPIFHVNADDPEAVAFATRLAVEYRNTFKRDVFIDLVGYRRHGHNEADEPSATQPLM 467
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    527 YKQIRKQKPVLQKYAELLVSQGVVNqpeyEEEISKYDKICEEAFARSKDeKILHIKHWLDSPWPGFFTLDgQPRSMSCPS 606
Cdd:TIGR00239  468 YQKIKKHPTPRKVYADKLVSEGVAT----EEDVTEMVNLYRDALEAADC-VVPSWREMNTASFTWSPELN-HEWDEEYPN 541
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    607 TgLTEDILTHIGNVASSVPvENFTIHGGLSRILKTRGEMVK--NRTVDWALAEYMAFGSLLKEGIHIRLSGQDVERGTFS 684
Cdd:TIGR00239  542 K-VEMKRLQELAKRISEVP-EGVEMHSRVAKIYFDRTKAMAagEKLFDWGGAENLAFATLVDDGIPVRLSGEDSERGTFF 619
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    685 HRHHVLHDQNvDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFICP 764
Cdd:TIGR00239  620 QRHAVLHDQS-NGSTYTPLQHLHNGQGAFRVWNSVLSEESVLGFEYGYATTSPRTLVIWEAQFGDFANGAQVVIDQFISS 698
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    765 GQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDpdvlpdlkeanfdinqlydcNWVVVNCSTPGNFFHVLRR 844
Cdd:TIGR00239  699 GEQKWGQMSGLVMLLPHGYEGQGPEHSSGRLERFLQLAAEQ--------------------NMQVCVPTTPAQVFHILRR 758
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    845 QILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGThFQRVIP--EDGPAAQNPENVKRLLFCTGKVYYDLtRERKARDMV 922
Cdd:TIGR00239  759 QALRGMRRPLVVMSPKSLLRHPLAVSSLEELAEGT-FQPVIGeiEESGLSLDPEGVKRLVLCSGKVYYDL-HEQRRKNGQ 836
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    923 GQVAITRIEQLSPFPFDLLLKEVQKYPN-AELAWCQEEHKNQGYYDYVKPRLRTTISRAKPVWYAGRDPAAAPATGNKKT 1001
Cdd:TIGR00239  837 KDVAIVRIEQLYPFPHKAVKEVLQQYPNlKEIVWCQEEPLNMGAWYYSQPHLREVIPEGVSVRYAGRPASASPAVGYMSL 916
                          970
                   ....*....|...
gi 51873036   1002 HLTELQRLLDTAF 1014
Cdd:TIGR00239  917 HQKQQQDLLNDAL 929
TPP_E1_OGDC_like cd02016
Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed ...
264-527 1.25e-179

Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC). OGDC catalyzes the oxidative decarboxylation of 2-oxoglutarate to succinyl-CoA and carbon dioxide, a key reaction of the tricarboxylic acid cycle.


Pssm-ID: 238974 [Multi-domain]  Cd Length: 265  Bit Score: 522.47  E-value: 1.25e-179
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  264 FEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAAD-- 341
Cdd:cd02016    1 FEQFLATKFPGQKRFGLEGAESLIPALDELIDRAAELGVEEVVIGMAHRGRLNVLANVLGKPLEQIFSEFEGKSEFPEdd 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  342 EGSGDVKYHLGMYHRRINRVtDRNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVY 421
Cdd:cd02016   81 EGSGDVKYHLGYSSDRKTPS-GKKVHLSLAPNPSHLEAVNPVVMGKTRAKQDYRGDGERDKVLPILIHGDAAFAGQGVVY 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  422 ETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDV 501
Cdd:cd02016  160 ETLNLSNLPGYTTGGTIHIVVNNQIGFTTDPRDSRSSPYCTDVAKMIGAPIFHVNGDDPEAVVRATRLALEYRQKFKKDV 239
                        250       260
                 ....*....|....*....|....*.
gi 51873036  502 VVDLVCYRRNGHNEMDEPMFTQPLMY 527
Cdd:cd02016  240 VIDLVCYRRHGHNELDEPSFTQPLMY 265
E1_dh pfam00676
Dehydrogenase E1 component; This family uses thiamine pyrophosphate as a cofactor. This family ...
256-582 7.07e-112

Dehydrogenase E1 component; This family uses thiamine pyrophosphate as a cofactor. This family includes pyruvate dehydrogenase, 2-oxoglutarate dehydrogenase and 2-oxoisovalerate dehydrogenase.


Pssm-ID: 395548 [Multi-domain]  Cd Length: 300  Bit Score: 348.16  E-value: 7.07e-112
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    256 ARLVRSTRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSENGvDYVIMGmpHRGRLNVLANVIRkeLEQIFCQFDS 335
Cdd:pfam00676    1 RRMMTLRRMEDARDALYKRQGIRGFYHLYAGQEAAQVGIAAALEPG-DYIIPG--YRDHGNLLARGLS--LEEIFAELYG 75
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    336 KLEaadEGSGDVKYhlGMYHRRINRVTDRNITLSLVANpshlEAADPVVMGKTkaeqfycgdtEGKKVMSILLHGDAAfA 415
Cdd:pfam00676   76 RVA---KGKGGSMH--GYYGAKGNRFYGGNGILGAQVP----LGAGIALAAKY----------RGKKEVAITLYGDGA-A 135
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    416 GQGIVYETFHLSDLPSYTThgtVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRS 495
Cdd:pfam00676  136 NQGDFFEGLNFAALWKLPV---IFVCENNQYGISTPAERASASTTYADRARGYGIPGLHVDGMDPLAVYQASKFAAERAR 212
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    496 TFHKDVVVDLVCYRRNGHNEMDEPMFTQ-PLMYKQIRKQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFARSK 574
Cdd:pfam00676  213 TGKGPFLIELVTYRYGGHSMSDDPSTYRtRDEYEEVRKKKDPIQRFKEHLVSKGVWSEEELKAIEKEVRKEVEEAFKKAE 292

                   ....*...
gi 51873036    575 DEKILHIK 582
Cdd:pfam00676  293 SAPEPHPE 300
OxoGdeHyase_C pfam16870
2-oxoglutarate dehydrogenase C-terminal; OxoGdeHyase_C is a family found immediately ...
869-1014 1.75e-80

2-oxoglutarate dehydrogenase C-terminal; OxoGdeHyase_C is a family found immediately C-terminal to Transket_pyr, pfam02779. It is found at the C-terminus of 2-oxoglutarate dehydrogenase.


Pssm-ID: 465289 [Multi-domain]  Cd Length: 147  Bit Score: 258.14  E-value: 1.75e-80
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    869 RSSFDEMLPGTHFQRVIPEDGPAaQNPENVKRLLFCTGKVYYDLTRERKARDMVGQVAITRIEQLSPFPFDLLLKEVQKY 948
Cdd:pfam16870    1 RSSLEEFTPGTHFQRVIPDPEPL-VDPEKVKRVVLCSGKVYYDLLKEREERGGIKDVAIVRIEQLYPFPFDLLKEELDKY 79
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 51873036    949 PNA-ELAWCQEEHKNQGYYDYVKPRLRTTISRA-KPVWYAGRDPAAAPATGNKKTHLTELQRLLDTAF 1014
Cdd:pfam16870   80 PNAaEIVWCQEEPKNQGAWSFVQPRLETVLNETgHRLRYAGRPPSASPATGSKSVHLAEQEALLDDAF 147
Transket_pyr pfam02779
Transketolase, pyrimidine binding domain; This family includes transketolase enzymes, pyruvate ...
649-864 2.93e-53

Transketolase, pyrimidine binding domain; This family includes transketolase enzymes, pyruvate dehydrogenases, and branched chain alpha-keto acid decarboxylases.


Pssm-ID: 460692 [Multi-domain]  Cd Length: 174  Bit Score: 183.52  E-value: 2.93e-53
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    649 RTVDWALAEYMAFGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDqnvdkrtcipmnhlwpnQAPYTVCNSSLSEYGVLGF 728
Cdd:pfam02779    1 KKIATRKASGEALAELAKRDPRVVGGGADLAGGTFTVTKGLLHP-----------------QGAGRVIDTGIAEQAMVGF 63
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036    729 ELGFAMASPNaLVLWEAQFGDFHNtaqcIIDQFICPGQAKWVRQNG-IVLLLPHGMEGMGPEHSSARPERFLQMCNddpd 807
Cdd:pfam02779   64 ANGMALHGPL-LPPVEATFSDFLN----RADDAIRHGAALGKLPVPfVVTRDPIGVGEDGPTHQSVEDLAFLRAIP---- 134
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 51873036    808 vlpdlkeanfdinqlydcNWVVVNCSTPGNFFHVLRRQILLPFRKPLIIFTPKSLLR 864
Cdd:pfam02779  135 ------------------GLKVVRPSDAAETKGLLRAAIRRDGRKPVVLRLPRQLLR 173
Transket_pyr smart00861
Transketolase, pyrimidine binding domain; Transketolase (TK) catalyzes the reversible transfer ...
717-864 4.19e-22

Transketolase, pyrimidine binding domain; Transketolase (TK) catalyzes the reversible transfer of a two-carbon ketol unit from xylulose 5-phosphate to an aldose receptor, such as ribose 5-phosphate, to form sedoheptulose 7-phosphate and glyceraldehyde 3- phosphate. This enzyme, together with transaldolase, provides a link between the glycolytic and pentose-phosphate pathways. TK requires thiamine pyrophosphate as a cofactor. In most sources where TK has been purified, it is a homodimer of approximately 70 Kd subunits. TK sequences from a variety of eukaryotic and prokaryotic sources show that the enzyme has been evolutionarily conserved. In the peroxisomes of methylotrophic yeast Hansenula polymorpha, there is a highly related enzyme, dihydroxy-acetone synthase (DHAS) (also known as formaldehyde transketolase), which exhibits a very unusual specificity by including formaldehyde amongst its substrates.


Pssm-ID: 214865 [Multi-domain]  Cd Length: 136  Bit Score: 92.93  E-value: 4.19e-22
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036     717 NSSLSEYGVLGFELGFAMAspnALVLWEAQFGDFHNTAQCIIDQFICpgqakWVRQNGIVLLLPHGMEGM-GPEHSSARP 795
Cdd:smart00861   19 DTGIAEQAMVGFAAGLALH---GLRPVVEIFFTFFDRAKDQIRSAGA-----SGNVPVVFRHDGGGGVGEdGPTHHSIED 90
                            90       100       110       120       130       140       150
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036     796 E-RFLQMcnddpdvlpdlkeanfdinqlydCNWVVVNCSTPGNFFHVLRRQILLPfRKPLIIFTPKSLLR 864
Cdd:smart00861   91 EaLLRAI-----------------------PGLKVVAPSDPAEAKGLLRAAIRDD-GPVVIRLERKSLYR 136
2-oxogl_dehyd_N pfam16078
2-oxoglutarate dehydrogenase N-terminus; This domain is found at the N-terminus of ...
47-87 1.25e-15

2-oxoglutarate dehydrogenase N-terminus; This domain is found at the N-terminus of 2-oxoglutarate dehydrogenases.


Pssm-ID: 465008 [Multi-domain]  Cd Length: 41  Bit Score: 71.41  E-value: 1.25e-15
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 51873036     47 EPFLSGTSSNYVEEMYCAWLENPKSVHKSWDIFFRNTNAGA 87
Cdd:pfam16078    1 DSFLSGANAAYIEELYEQYLKDPSSVDPSWRAYFDNLDDGE 41
TPP_E1_PDC_ADC_BCADC cd02000
Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; ...
400-572 1.11e-11

Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC). PDC catalyzes the irreversible oxidative decarboxylation of pyruvate to produce acetyl-CoA in the bridging step between glycolysis and the citric acid cycle. ADC participates in the breakdown of acetoin while BCADC participates in the breakdown of branched chain amino acids. BCADC catalyzes the oxidative decarboxylation of 4-methyl-2-oxopentanoate, 3-methyl-2-oxopentanoate and 3-methyl-2-oxobutanoate (branched chain 2-oxo acids derived from the transamination of leucine, valine and isoleucine).


Pssm-ID: 238958 [Multi-domain]  Cd Length: 293  Bit Score: 66.75  E-value: 1.11e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  400 GKKVMSILLHGDAAfAGQGIVYETFHLS---DLPsytthgTVHVVVNNQIGFTTdPRmARSSPYPTDVARVVNA--PIFH 474
Cdd:cd02000  124 GEDRVAVCFFGDGA-TNEGDFHEALNFAalwKLP------VIFVCENNGYAIST-PT-SRQTAGTSIADRAAAYgiPGIR 194
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51873036  475 VNSDDPEAVMYVCKVAAEW-RSTfHKDVVVDLVCYRRNGHNEMDEPMftqplMYK-----QIRKQKPVLQKYAELLVSQG 548
Cdd:cd02000  195 VDGNDVLAVYEAAKEAVERaRAG-GGPTLIEAVTYRLGGHSTSDDPS-----RYRtkeevEEWKKRDPILRLRKYLIEAG 268
                        170       180
                 ....*....|....*....|....
gi 51873036  549 VVNQPEYEEEISKYDKICEEAFAR 572
Cdd:cd02000  269 ILTEEELAAIEAEVKAEVEEAVEF 292
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
57-112 1.86e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 42.18  E-value: 1.86e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 51873036    57 YVEEMYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLPLSRGSLAAVAHAQS 112
Cdd:PRK12270   10 LVEEMYQQYLADPNSVDPSWREFFADYGPGSTAAPTAAAAAAAAAASAPAAAPAAK 65
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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