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Conserved domains on  [gi|5835252|ref|NP_007294|]
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ATP synthase F0 subunit 6 (mitochondrion) [Locusta migratoria migratorioides]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 6.86e-101

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 291.69  E-value: 6.86e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252     1 MMTNLFSTFDPSTNlFNLSLNWTSTFLGLLLIPSMFWLMPSRINILWNKMNLNLHNEFKTLLGKNsFQGSTLILISIFIM 80
Cdd:MTH00157   1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    81 MLFNNFMGLFPYIFTSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFTHLVPQGTPNALMSFMVLIETISNVIRPGTLAV 160
Cdd:MTH00157  79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 5835252   161 RLAANMIAGHLLLTLLGNTGPSLTTSIMLFLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:MTH00157 159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 6.86e-101

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 291.69  E-value: 6.86e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252     1 MMTNLFSTFDPSTNlFNLSLNWTSTFLGLLLIPSMFWLMPSRINILWNKMNLNLHNEFKTLLGKNsFQGSTLILISIFIM 80
Cdd:MTH00157   1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    81 MLFNNFMGLFPYIFTSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFTHLVPQGTPNALMSFMVLIETISNVIRPGTLAV 160
Cdd:MTH00157  79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 5835252   161 RLAANMIAGHLLLTLLGNTGPSLTTSIMLFLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:MTH00157 159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-225 6.72e-45

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 149.28  E-value: 6.72e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252      5 LFSTFDPST-NLFNLSLNWTSTFLGLLLIPSMF----WLMPSRINILWNKMNLNLHNEFKTLLGKNSfQGSTLILISIFI 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKK-GKFFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252     80 MMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFTHLVPQGTPNALMSFMVLIETISNVIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 5835252    160 VRLAANMIAGHLLLTLLGNTGPSLTT-SIMLFLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMSsAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 67-222 7.29e-41

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 136.76  E-value: 7.29e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252   67 FQGSTLILISIFIMMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFTHLVPQGTPNALMSFMVLI 146
Cdd:cd00310   1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 5835252  147 ETISNVIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLTTSIMLFLIIGQMLLLILESAVAMIQAYVFSILSTLYSS 222
Cdd:cd00310  81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
38-222 5.28e-24

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 94.86  E-value: 5.28e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252     38 LMPSRINILWNKMNLNLHNEFKTLLGKNSFQGSTLILISIFIMMLFNNFMGLF---PYIFTSTSHMTLTFSIALPMWMSF 114
Cdd:pfam00119  25 LVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLV 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    115 MLFGWINN-TNHMFTHLVPQGTPNALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLTTSIMLFLII 193
Cdd:pfam00119 105 HYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVI 184

                         170       180       190
                  ....*....|....*....|....*....|..
gi 5835252    194 ---GQMLLLILESAVAMIQAYVFSILSTLYSS 222
Cdd:pfam00119 185 pplLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 73-220 2.91e-20

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 84.74  E-value: 2.91e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252   73 ILISIFIMMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWMSFMLFG-WINNTNHMFTHLVPQGTPnALMSFMVLIETISN 151
Cdd:COG0356  60 LLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFP-WLAPLMLPIEIISE 138

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 5835252  152 VIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLTTSIMLFLIigQMLLLILESAVAMIQAYVFSILSTLY 220
Cdd:COG0356 139 LARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 6.86e-101

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 291.69  E-value: 6.86e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252     1 MMTNLFSTFDPSTNlFNLSLNWTSTFLGLLLIPSMFWLMPSRINILWNKMNLNLHNEFKTLLGKNsFQGSTLILISIFIM 80
Cdd:MTH00157   1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    81 MLFNNFMGLFPYIFTSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFTHLVPQGTPNALMSFMVLIETISNVIRPGTLAV 160
Cdd:MTH00157  79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 5835252   161 RLAANMIAGHLLLTLLGNTGPSLTTSIMLFLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:MTH00157 159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-225 8.70e-52

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 167.13  E-value: 8.70e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252     1 MMTNLFSTFDP--STNLFNLSLNWTSTFLGLLLIPSMFWLMPSRINILWNKMNlNLHNEFKTLLGKNSFQGSTLILISIF 78
Cdd:MTH00176   1 MLVDLFSSFDPpnKNIFSMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFS-TFLPEMILRSNGSYILGSASIIISLF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    79 IMMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFTHLVPQGTPNALMSFMVLIETISNVIRPGTL 158
Cdd:MTH00176  80 ILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTL 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252   159 AVRLAANMIAGHLLLTLLGNTGPSLTTS---IMLFLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:MTH00176 160 AVRLAANLSAGHLLLGLLGAAMWGLLPVsplIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-225 6.72e-45

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 149.28  E-value: 6.72e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252      5 LFSTFDPST-NLFNLSLNWTSTFLGLLLIPSMF----WLMPSRINILWNKMNLNLHNEFKTLLGKNSfQGSTLILISIFI 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKK-GKFFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252     80 MMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFTHLVPQGTPNALMSFMVLIETISNVIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 5835252    160 VRLAANMIAGHLLLTLLGNTGPSLTT-SIMLFLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMSsAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-223 2.68e-41

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 140.25  E-value: 2.68e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252     1 MMTNLFSTFDPSTNLFNLSLN----WTSTFLGLLLIPSMFWLMPSRINILWNKMNLNLHNEFKTLLGKNsFQGSTLILIS 76
Cdd:MTH00005   1 MLTDIFSSFDPATNSLFNNLSstafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKH-LKGFSSLISA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    77 IFIMMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFTHLVPQGTPNALMSFMVLIETISNVIRPG 156
Cdd:MTH00005  80 LFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPI 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252   157 TLAVRLAANMIAGHLLLTLLGN-TGPSLTTSIMLF--LIIGQMLLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00005 160 TLSFRLAANMSAGHIVLSLIGIyAASALFSSISSTilLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 67-222 7.29e-41

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 136.76  E-value: 7.29e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252   67 FQGSTLILISIFIMMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFTHLVPQGTPNALMSFMVLI 146
Cdd:cd00310   1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 5835252  147 ETISNVIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLTTSIMLFLIIGQMLLLILESAVAMIQAYVFSILSTLYSS 222
Cdd:cd00310  81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-223 1.56e-39

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 135.87  E-value: 1.56e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252     3 TNLFSTFDPSTNLFnLSLNWTSTFLGL---LLIPSMFWLmPSRINILWNkmnlNLHNEFKTLLGKNSFQGS---TLILIS 76
Cdd:MTH00035   5 NSIFGQFSPDTILF-IPLTLLSSVIALswlFFINPTNWL-PSRSQSIWL----TFRQEILKLIFQNTNPNTapwAGLLTT 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    77 IFIMMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFTHLVPQGTPNALMSFMVLIETISNVIRPG 156
Cdd:MTH00035  79 VFILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPI 158

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 5835252   157 TLAVRLAANMIAGHLLLTLLGNT----GPSLTTSIMLFLIIGqmLLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00035 159 ALGLRLAANLTAGHLLIFLLSTAiwelSNSPLISIITLIIFF--LLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-223 1.69e-38

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 133.07  E-value: 1.69e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252     1 MMTNLFSTFDPSTNLFNL--SLNWTSTFLGLLLIPSMFWLMPSRINILWNKMNLNLHNEFKTLLGKNsFQGSTLILISIF 78
Cdd:MTH00173   1 MMVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLN-LGGFSLLLSSLF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    79 IMMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFTHLVPQGTPNALMSFMVLIETISNVIRPGTL 158
Cdd:MTH00173  80 LFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 5835252   159 AVRLAANMIAGHLLLTLLGNTGPSLTTS----IMLFLIIGQMLLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00173 160 TVRLLANISAGHIVLTLIGNYLSSSLFSssvvSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-223 8.91e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 115.43  E-value: 8.91e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252     1 MMTNLFSTFDpSTNLFNLSLNWTSTFLGLLLIPSMFWLMP-SRINILWNKMNLNLHNEFKTLLGKNSFQGStLILISIFI 79
Cdd:MTH00179   1 MMLSMFDQFE-SPSLLGIPLLALALLLPWLLFPSLTNRWLnNRLSTLQSWFFGSFTFQLMQPINKKGHKWA-VLFLSLML 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    80 MMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFTHLVPQGTPNALMSFMVLIETISNVIRPGTLA 159
Cdd:MTH00179  79 FLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALG 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 5835252   160 VRLAANMIAGHLLLTLLGNTGPSLTTSIMLFLIIGQ---MLLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00179 159 VRLTANITAGHLLMHLISSAVFVLMNFMGMVALLTLlvlFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-223 9.31e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 115.31  E-value: 9.31e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252     1 MMTNLFSTFDPSTNLFnlslnwTSTFLGLLLIPSMFWLMPS---RINILWNKMNLNLHNEFKTLLGKNSFQGS--TLILI 75
Cdd:MTH00120   1 MNLNFFDQFSSPELLG------IPLILLAMLIPALLIPSPKnrlLTNRLTTLQLWLIKLITKQLMLPLNKKGHkwALILT 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    76 SIFIMMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFTHLVPQGTPNALMSFMVLIETISNVIRP 155
Cdd:MTH00120  75 SLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRP 154

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 5835252   156 GTLAVRLAANMIAGHLLLTLLGNTGPSL-----TTSIMLFLIIgqMLLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00120 155 LALGVRLTANLTAGHLLIQLISTATLNLlptmpTLSLLTLIIL--LLLTILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 71-220 3.68e-29

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 108.89  E-value: 3.68e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    71 TLILISIFIMMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFTHLVPQGTPNALMSFMVLIETIS 150
Cdd:MTH00101  69 SLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETIS 148

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 5835252   151 NVIRPGTLAVRLAANMIAGHLLLTLLGN-----TGPSLTTSIMLFLIIgqMLLLILESAVAMIQAYVFSILSTLY 220
Cdd:MTH00101 149 LFIQPMALAVRLTANITAGHLLIHLIGGatlalMSISTTTALITFIIL--ILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 72-223 3.93e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 108.81  E-value: 3.93e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    72 LILISIFIMMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFTHLVPQGTPNALMSFMVLIETISN 151
Cdd:MTH00132  71 LLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISL 150

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252   152 VIRPGTLAVRLAANMIAGHLLLTLLGNTG---------PSLTTSIMLFliigqmLLLILESAVAMIQAYVFSILSTLYSS 222
Cdd:MTH00132 151 FIRPLALGVRLTANLTAGHLLIQLIATAAfvllplmptVAILTATLLF------LLTLLEVAVAMIQAYVFVLLLSLYLQ 224


                 .
gi 5835252   223 E 223
Cdd:MTH00132 225 E 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-223 1.97e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 104.28  E-value: 1.97e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252     1 MMTNLFSTFDPSTnLFNLSLNWTSTFLGLLLI--PSMFWLmPSRINILwnkMNLNLHNEFKTLLGKNSFQGS--TLILIS 76
Cdd:MTH00073   1 MNLSFFDQFLSPT-LLGIPLIMLAMLLPWLLFptPTNKWL-NNRLSTL---QIWFLQNFTKQLMLPLNTPGHkwALILTS 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    77 IFIMMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFTHLVPQGTPNALMSFMVLIETISNVIRPG 156
Cdd:MTH00073  76 LMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPL 155

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 5835252   157 TLAVRLAANMIAGHLLLTLLGNTGPSL-----TTSIMLFLIIgqMLLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00073 156 ALGVRLTANLTAGHLLIQLISTATLVLlplmpTVSILTMIVL--FLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 17-220 4.00e-25

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 98.54  E-value: 4.00e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    17 NLSLNWTSTFLGLLLIPSMFWLM-------PSRINILWNKMNLNLHNEFKTLLGKNSfQGSTLILISIFIMMLFNNFMGL 89
Cdd:MTH00175  23 DWLVTFTNSSMMMVLAVIIFWLLlkgdkliPNRWQSIMELIYLNIRSVVHDNLGKSG-QKYFPFILSLFLFIAILNILGL 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    90 FPYIFTSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFTHLVPQGTPNALMSFMVLIETISNVIRPGTLAVRLAANMIAG 169
Cdd:MTH00175 102 FPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAG 181

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 5835252   170 HLLLTLLGNTGPSLTTSIMLFLIIGQMLLLI----LESAVAMIQAYVFSILSTLY 220
Cdd:MTH00175 182 HLLFAILSGFAFNMLSNGLIILSLFPMLIMIfitlLEMAVAVIQAYVFCLLTTIY 236
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 15-220 1.30e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 97.03  E-value: 1.30e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    15 LFNLSLNWTSTFLGLLLIPSMFWLMPSRINILWNKMNLNLHNEFKTLLGKNSFQGSTLIlISIFIMMLFNNFMGLFPYIF 94
Cdd:MTH00172  17 LTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFI-ISLFFFIVFLNLLGLFPYVF 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    95 TSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFTHLVPQGTPNALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLLT 174
Cdd:MTH00172  96 TPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFA 175

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 5835252   175 LLGNTGPSLTTSIMLFLIIGQMLLL---ILESAVAMIQAYVFSILSTLY 220
Cdd:MTH00172 176 ILAGFGFNMLCASGFLSLFPLLIMVfitLLEIAVAVIQAYVFCLLTTIY 224
ATP-synt_A pfam00119
ATP synthase A chain;
38-222 5.28e-24

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 94.86  E-value: 5.28e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252     38 LMPSRINILWNKMNLNLHNEFKTLLGKNSFQGSTLILISIFIMMLFNNFMGLF---PYIFTSTSHMTLTFSIALPMWMSF 114
Cdd:pfam00119  25 LVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLV 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    115 MLFGWINN-TNHMFTHLVPQGTPNALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLTTSIMLFLII 193
Cdd:pfam00119 105 HYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVI 184

                         170       180       190
                  ....*....|....*....|....*....|..
gi 5835252    194 ---GQMLLLILESAVAMIQAYVFSILSTLYSS 222
Cdd:pfam00119 185 pplLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 73-220 2.91e-20

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 84.74  E-value: 2.91e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252   73 ILISIFIMMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWMSFMLFG-WINNTNHMFTHLVPQGTPnALMSFMVLIETISN 151
Cdd:COG0356  60 LLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFP-WLAPLMLPIEIISE 138

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 5835252  152 VIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLTTSIMLFLIigQMLLLILESAVAMIQAYVFSILSTLY 220
Cdd:COG0356 139 LARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAVY 205
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 74-220 1.11e-16

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 76.13  E-value: 1.11e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    74 LISIFIMMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFTHLVPQGTPNALMSFMVLIETISNVI 153
Cdd:MTH00174  94 VLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYIS 173

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 5835252   154 RPGTLAVRLAANMIAGHLLLTLLGNTGPSLTTSIMLFLIIGQMLLL----ILESAVAMIQAYVFSILSTLY 220
Cdd:MTH00174 174 RAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIGSFVPFAILifvtILEMAVAIIQAYVFTLLTIVY 244
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 73-220 6.47e-16

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 73.68  E-value: 6.47e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    73 ILISIFIMMLFNNFMGLFP-YIFTSTSHMTLTFSIALPMWMSFMLFG-WINNTNHMFTHLVPQGTPnalmsFMVLIETIS 150
Cdd:PRK05815  75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQPHP-----LLLPIEIIS 149

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252   151 NVIRPGTLAVRLAANMIAGHLLLTLLGnTGPSLTTSIMLFLIIGQMLLLILESAVAMIQAYVFSILSTLY 220
Cdd:PRK05815 150 EFSRPISLSLRLFGNMLAGELILALIA-LLGGAGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVY 218
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 74-220 1.19e-11

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 62.84  E-value: 1.19e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    74 LISIFIMMLFNNFMGLFPYIFTSTSHMTLTFSIALpmwMSFMLFGWINNTNH----MFTHLVpQGTPNALMSFMVLIETI 149
Cdd:PRK13419 174 LLTVFFFILVCNLLGLVPYGATATGNINVTLTLAV---FTFFITQYAAIKAHgikgYLAHLT-GGTHWSLWIIMIPIEFI 249

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 5835252   150 SNVIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLTTSIMLFLIIGQMLLLI--LESAVAMIQAYVFSILSTLY 220
Cdd:PRK13419 250 GLFTKPFALTVRLFANMTAGHIVILSLIFISFILKSYIVAVAVSVPFAIFIylLELFVAFLQAYIFTMLSALF 322
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 26-223 4.90e-08

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 51.13  E-value: 4.90e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    26 FLGLLLIPSMFWLMPSRINILWNKMNLNLHNEFKTLlgkNSFQGSTLILISIFIMMLFNNFMGLFPYIFTSTSHMTLTFS 105
Cdd:MTH00087  10 FMFVFLLQYLLYFKESMLNVLVKKFFGLLIIVFSYS---NKLPLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252   106 IALPMWMSFMLFGWINNTnhMFTHLVPQGTPNALMSF-MVLIETISNVIRPGTLAVRLAANMIAGHLLLtllgntgpSLT 184
Cdd:MTH00087  87 YALVAWLSTFLSFLSKSE--KFSVYLSKGSDSFLKTFsMLFVEIVSELSRPLALTLRLTVNLMVGHLIS--------SLL 156

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 5835252   185 TSIMLFLIIGQMLLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00087 157 NFLGEKYVWLSILAIMMECFVAFIQSYIFSRLIYLYLNE 195
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 95-220 4.80e-07

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 49.50  E-value: 4.80e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    95 TSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFTHLVPQGTPNALMSFMVLIETI-SNVIRPGTLAVRLAANMIAGHLLL 173
Cdd:PRK13417 217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 5835252   174 T-LLGNTGPSLTTSIMLFLIIGQMLLLILESAVAMIQAYVFSILSTLY 220
Cdd:PRK13417 297 LaLMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 50-169 7.73e-07

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 47.57  E-value: 7.73e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    50 MNLNLHNEFKTLLGKNSFQGSTLILISIFIMMLFNNFMGL-FPYIFTSTSHMTLTFSIALPMWMSFMLFGWINNTNHMFT 128
Cdd:MTH00050   1 MFVNDFSSLFSLIYKLILGGSVSYYYSVVLFIVLFLFLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFS 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 5835252   129 HLVPQGTPNALMSFMVLIETISNVIRPGTLAVRLAANMIAG 169
Cdd:MTH00050  81 SFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLG 121
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 76-220 2.79e-03

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 37.80  E-value: 2.79e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5835252    76 SIFIMMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWMSFMLFG-----WINNTNHMFThlvpqgtPNAlmsFMVLIETIS 150
Cdd:PRK13420  80 TLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFGiraegLREYLKHYLS-------PSP---FLLPFHLIS 149

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 5835252   151 NVIRPGTLAVRLAANMIaghllltllgntgpSLTTSIMLFLIIGQML----LLILESAVAMIQAYVFSILSTLY 220
Cdd:PRK13420 150 EITRTLALAVRLFGNIM--------------SLELAALLVLLVAGFLvpvpILMLHIIEALVQAYIFGMLALIY 209
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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