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Conserved domains on  [gi|5901898|ref|NP_008923|]
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leucine-rich repeat-containing protein 23 isoform b [Homo sapiens]

Protein Classification

leucine-rich repeat domain-containing protein( domain architecture ID 11469232)

leucine-rich repeat (LRR) domain-containing protein may participate in protein-protein interactions

Gene Ontology:  GO:0005515
PubMed:  11751054|7583641|14747988
SCOP:  4003523

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
75-256 8.56e-19

Leucine-rich repeat (LRR) protein [Transcription];


:

Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 86.14  E-value: 8.56e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5901898   75 EVKERDLTDIYLLRSYIHLRYVDISENHLTDLSP-LNYLTHLLWLKADGNRLRS--AQMNELPYLQIASFAYNQITD-TE 150
Cdd:COG4886  97 NLTELDLSGNEELSNLTNLESLDLSGNQLTDLPEeLANLTNLKELDLSNNQLTDlpEPLGNLTNLKSLDLSNNQLTDlPE 176

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5901898  151 GISH-PRLETLNLKGNSIhmvTGLDPE--KLISLHTVELRGNQLES---TLGiNLPKLKNLYLAQNMLKKVEGLEDLSNL 224
Cdd:COG4886 177 ELGNlTNLKELDLSNNQI---TDLPEPlgNLTNLEELDLSGNQLTDlpePLA-NLTNLETLDLSNNQLTDLPELGNLTNL 252

                       170       180       190
                ....*....|....*....|....*....|..
gi 5901898  225 TTLHLRDNQIDTLSgFSREMKSLQYLNLRRSK 256
Cdd:COG4886 253 EELDLSNNQLTDLP-PLANLTNLKTLDLSNNQ 283
 
Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
75-256 8.56e-19

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 86.14  E-value: 8.56e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5901898   75 EVKERDLTDIYLLRSYIHLRYVDISENHLTDLSP-LNYLTHLLWLKADGNRLRS--AQMNELPYLQIASFAYNQITD-TE 150
Cdd:COG4886  97 NLTELDLSGNEELSNLTNLESLDLSGNQLTDLPEeLANLTNLKELDLSNNQLTDlpEPLGNLTNLKSLDLSNNQLTDlPE 176

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5901898  151 GISH-PRLETLNLKGNSIhmvTGLDPE--KLISLHTVELRGNQLES---TLGiNLPKLKNLYLAQNMLKKVEGLEDLSNL 224
Cdd:COG4886 177 ELGNlTNLKELDLSNNQI---TDLPEPlgNLTNLEELDLSGNQLTDlpePLA-NLTNLETLDLSNNQLTDLPELGNLTNL 252

                       170       180       190
                ....*....|....*....|....*....|..
gi 5901898  225 TTLHLRDNQIDTLSgFSREMKSLQYLNLRRSK 256
Cdd:COG4886 253 EELDLSNNQLTDLP-PLANLTNLKTLDLSNNQ 283
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 146-256 3.88e-11

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 61.73  E-value: 3.88e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5901898  146 ITDTEGISHPR-LETLNLKGNSIHMVTGLDP-EKLISLHtveLRGNQLESTLGI-NLPKLKNLYLAQNMLKKVEGLEDLS 222
Cdd:cd21340  14 ITKIDNLSLCKnLKVLYLYDNKITKIENLEFlTNLTHLY---LQNNQIEKIENLeNLVNLKKLYLGGNRISVVEGLENLT 90

                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*...
gi 5901898  223 NLTTLHLrDNQ--------------IDTLSgfsremKSLQYLNLRRSK 256
Cdd:cd21340  91 NLEELHI-ENQrlppgekltfdprsLAALS------NSLRVLNISGNN 131
LRR_4 pfam12799
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ...
 200-241 1.13e-05

Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.


Pssm-ID: 463713 [Multi-domain]  Cd Length: 44  Bit Score: 41.85  E-value: 1.13e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 5901898    200 PKLKNLYLAQNMLKKVEGLEDLSNLTTLHLRDN-QIDTLSGFS 241
Cdd:pfam12799   1 PNLEVLDLSNNQITDIPPLAKLPNLETLDLSGNnKITDLSDLA 43
 
Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
75-256 8.56e-19

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 86.14  E-value: 8.56e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5901898   75 EVKERDLTDIYLLRSYIHLRYVDISENHLTDLSP-LNYLTHLLWLKADGNRLRS--AQMNELPYLQIASFAYNQITD-TE 150
Cdd:COG4886  97 NLTELDLSGNEELSNLTNLESLDLSGNQLTDLPEeLANLTNLKELDLSNNQLTDlpEPLGNLTNLKSLDLSNNQLTDlPE 176

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5901898  151 GISH-PRLETLNLKGNSIhmvTGLDPE--KLISLHTVELRGNQLES---TLGiNLPKLKNLYLAQNMLKKVEGLEDLSNL 224
Cdd:COG4886 177 ELGNlTNLKELDLSNNQI---TDLPEPlgNLTNLEELDLSGNQLTDlpePLA-NLTNLETLDLSNNQLTDLPELGNLTNL 252

                       170       180       190
                ....*....|....*....|....*....|..
gi 5901898  225 TTLHLRDNQIDTLSgFSREMKSLQYLNLRRSK 256
Cdd:COG4886 253 EELDLSNNQLTDLP-PLANLTNLKTLDLSNNQ 283
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 146-256 3.88e-11

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 61.73  E-value: 3.88e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5901898  146 ITDTEGISHPR-LETLNLKGNSIHMVTGLDP-EKLISLHtveLRGNQLESTLGI-NLPKLKNLYLAQNMLKKVEGLEDLS 222
Cdd:cd21340  14 ITKIDNLSLCKnLKVLYLYDNKITKIENLEFlTNLTHLY---LQNNQIEKIENLeNLVNLKKLYLGGNRISVVEGLENLT 90

                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*...
gi 5901898  223 NLTTLHLrDNQ--------------IDTLSgfsremKSLQYLNLRRSK 256
Cdd:cd21340  91 NLEELHI-ENQrlppgekltfdprsLAALS------NSLRVLNISGNN 131
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 78-253 8.40e-10

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 57.87  E-value: 8.40e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5901898   78 ERDLTDIYLLRSYIHLRYVDISENHLTDLSPLNYLTHLLWLkadgnrlrsaqmnelpYLQiasfaYNQITDTEGISH-PR 156
Cdd:cd21340  11 DKNITKIDNLSLCKNLKVLYLYDNKITKIENLEFLTNLTHL----------------YLQ-----NNQIEKIENLENlVN 69

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5901898  157 LETLNLKGNSIHMVTGLD-PEKLISLHtVE----LRGNQLE----STLGInLPKLKNLYLAQNMLKKVEGLEDLSNLTTL 227
Cdd:cd21340  70 LKKLYLGGNRISVVEGLEnLTNLEELH-IEnqrlPPGEKLTfdprSLAAL-SNSLRVLNISGNNIDSLEPLAPLRNLEQL 147

                       170       180
                ....*....|....*....|....*....
gi 5901898  228 HLRDNQIDTLSGFS---REMKSLQYLNLR 253
Cdd:cd21340 148 DASNNQISDLEELLdllSSWPSLRELDLT 176
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
93-266 3.19e-07

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 51.47  E-value: 3.19e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5901898   93 LRYVDISENHLTDLS-PLNYLTHLLWLKADGNRLRS-AQMNELPYLQIASFAYNQITD-TEGISHPRLETLNLKGNSIH- 168
Cdd:COG4886 207 LEELDLSGNQLTDLPePLANLTNLETLDLSNNQLTDlPELGNLTNLEELDLSNNQLTDlPPLANLTNLKTLDLSNNQLTd 286

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5901898  169 -MVTGLDPEKLISLHTVELRGNQLESTLGINLPKLKNLYLAQNMLKKVEGLEDLSNLTTLHLRDNQIDTLSGFSREMKSL 247
Cdd:COG4886 287 lKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLL 366

                       170
                ....*....|....*....
gi 5901898  248 QYLNLRRSKTLAFRPDQTP 266
Cdd:COG4886 367 LTLGLLGLLEATLLTLALL 385
LRR_4 pfam12799
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ...
 200-241 1.13e-05

Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.


Pssm-ID: 463713 [Multi-domain]  Cd Length: 44  Bit Score: 41.85  E-value: 1.13e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 5901898    200 PKLKNLYLAQNMLKKVEGLEDLSNLTTLHLRDN-QIDTLSGFS 241
Cdd:pfam12799   1 PNLEVLDLSNNQITDIPPLAKLPNLETLDLSGNnKITDLSDLA 43
RNA1 COG5238
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ...
 86-234 2.52e-05

Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];


Pssm-ID: 444072 [Multi-domain]  Cd Length: 434  Bit Score: 45.55  E-value: 2.52e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5901898   86 LLRSYIHLRYVDISENHLTDLSPLNYLTHLlwlkadgnrlrsAQMNELPYLqiaSFAYNQITDTEGIS-------HPRLE 158
Cdd:COG5238 287 ALQGNTTLTSLDLSVNRIGDEGAIALAEGL------------QGNKTLHTL---NLAYNGIGAQGAIAlakalqeNTTLH 351

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5901898  159 TLNLKGNSI--HMVTGL--DPEKLISLHTVELRGNqlestlgiNLPKLKNLYLAQNMLKkvegledlSNLTTLHLRDNQI 234
Cdd:COG5238 352 SLDLSDNQIgdEGAIALakYLEGNTTLRELNLGKN--------NIGKQGAEALIDALQT--------NRLHTLILDGNLI 415
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 93-163 5.13e-05

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 43.62  E-value: 5.13e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5901898   93 LRYVDISENHLTDLSPLNYLTHLLWLKADGNRLRSAQ-----MNELPYLQIASFAYNQIT------DTEGISHPRLETLN 161
Cdd:cd21340 122 LRVLNISGNNIDSLEPLAPLRNLEQLDASNNQISDLEelldlLSSWPSLRELDLTGNPVCkkpkyrDKIILASKSLEVLD 201


                ..
gi 5901898  162 LK 163
Cdd:cd21340 202 GK 203
LRR_8 pfam13855
Leucine rich repeat;
200-254 7.07e-05

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 40.20  E-value: 7.07e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 5901898    200 PKLKNLYLAQNMLKKVEG--LEDLSNLTTLHLRDNQIDTLSG--FSReMKSLQYLNLRR 254
Cdd:pfam13855   1 PNLRSLDLSNNRLTSLDDgaFKGLSNLKVLDLSNNLLTTLSPgaFSG-LPSLRYLDLSG 58
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
92-243 1.61e-04

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 43.00  E-value: 1.61e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5901898   92 HLRYVDISENHLTDLSPLNYLTHLLWLKADGNRLRSA-QMNELPYLQIASFAYNQITDTEGISHPRLETLNLKGNSIHMV 170
Cdd:COG4886 229 NLETLDLSNNQLTDLPELGNLTNLEELDLSNNQLTDLpPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLL 308

                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 5901898  171 TGLDPEKLISLHTVELRGNQLESTLGINLPKLKNLYLAQNMLKKVEGLEDLSNLTTLHLRDNQIDTLSGFSRE 243
Cdd:COG4886 309 NLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLT 381
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
81-238 5.67e-04

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 41.46  E-value: 5.67e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5901898   81 LTDIYLLRSYIHLRYVDISENHLTDLSPLNYLTHLLWLKADGNRLRSAQMNELP-YLQIASFAYNQITDTEGISHPRLET 159
Cdd:COG4886 240 LTDLPELGNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLKLKELElLLGLNSLLLLLLLLNLLELLILLLL 319

                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 5901898  160 LNLKGNSIHMVTGLDPEKLISLHTVELRGNQLESTLGINLPKLKNLYLAQNMLKKVEGLEDLSNLTTLHLRDNQIDTLS 238
Cdd:COG4886 320 LTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTA 398
LRR_8 pfam13855
Leucine rich repeat;
180-234 1.18e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 36.73  E-value: 1.18e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 5901898    180 SLHTVELRGNQLES---TLGINLPKLKNLYLAQNMLKKVEG--LEDLSNLTTLHLRDNQI 234
Cdd:pfam13855   2 NLRSLDLSNNRLTSlddGAFKGLSNLKVLDLSNNLLTTLSPgaFSGLPSLRYLDLSGNRL 61
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
101-252 1.72e-03

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 39.92  E-value: 1.72e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5901898  101 NHLTDLSPLNYLTHLLWLKADGNRLRSAQMNELPYLQIASFAYNQITDTEGISHPRLETLNLKGNSIHMVTGLDPEKLIS 180
Cdd:COG4886   2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLL 81

                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 5901898  181 LHTVELRGNQLEstlgiNLPKLKNLYLAQNmlkkvEGLEDLSNLTTLHLRDNQIDTLSGFSREMKSLQYLNL 252
Cdd:COG4886  82 LSLLLLGLTDLG-----DLTNLTELDLSGN-----EELSNLTNLESLDLSGNQLTDLPEELANLTNLKELDL 143
RNA1 COG5238
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ...
 144-256 2.84e-03

Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];


Pssm-ID: 444072 [Multi-domain]  Cd Length: 434  Bit Score: 39.00  E-value: 2.84e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5901898  144 NQITDtEGI--------SHPRLETLNLKGNSI---HMV---TGLdpEKLISLHTVELRGNQLESTLGINLPK-------L 202
Cdd:COG5238 246 NQIGD-EGVialaealkNNTTVETLYLSGNQIgaeGAIalaKAL--QGNTTLTSLDLSVNRIGDEGAIALAEglqgnktL 322

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 5901898  203 KNLYLAQN------MLKKVEGLEDLSNLTTLHLRDNQI-----DTLSGFSREMKSLQYLNLRRSK 256
Cdd:COG5238 323 HTLNLAYNgigaqgAIALAKALQENTTLHSLDLSDNQIgdegaIALAKYLEGNTTLRELNLGKNN 387
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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