NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|6319941|ref|NP_010022|]
View 

Git1p [Saccharomyces cerevisiae S288C]

Protein Classification

MFS transporter( domain architecture ID 13024272)

major facilitator superfamily (MFS) transporter facilitates the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides; similar to Saccharomyces cerevisiae glycerophosphoinositol transporter 1 and Arabidopsis thaliana inorganic phosphate transporter 1-8

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
MFS_PhT cd17364
Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This ...
48-454 8.65e-136

Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of predominantly fungal and plant high-affinity inorganic phosphate transporters (PhT or PiPT), which are involved in the uptake, translocation, and internal transport of inorganic phosphate. They also function in sensing external phosphate levels as transceptors. Phosphate is crucial for structural and metabolic needs, including nucleotide and lipid synthesis, signalling and chemical energy storage. The Pht subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340922 [Multi-domain]  Cd Length: 389  Bit Score: 398.19  E-value: 8.65e-136
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   48 IIASGFALISDGYVNGSMSMLNKVFVMEYG--KKNYSSKVSTRVSNAALVGIIFGQFFMGIAADYYSRKSCILVATAILV 125
Cdd:cd17364   1 IIIAGMGFFTDAYDLFSISLVTKILGRLYYggKGSLPSGVSGLVNAAALVGTIIGQLFFGFLGDRFGRKRVYGVELIIMI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  126 IGSALCAASHGTTVPGMFWMLTVMRGLVGIGVGAEYPTSTLSANESANeyttTKRGGILVMVTNLPLAFGGPFATIIFLI 205
Cdd:cd17364  81 IGTILSALSPGSTPLGVMGWLIFFRFLLGIGIGGDYPLSATIMSEYAN----KKRRGALIAAVFAMQGFGILAGAIVTLI 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  206 VYKICSGT------KHLEAIWRTVFAIGCFWPLSVFYFRwktattevyekgrikrnipyflalkfywKRLLGTCGTWFMY 279
Cdd:cd17364 157 LSAIFEHPlpagtyHHADLVWRIVLGLGAIPALSVLYFR----------------------------KHLLGTAGTWFLL 208
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  280 DFVTFPNGIFSSTIISSV------IKDQNDLVKVAEWNLLLGVLAVLGVPIGAYLSDRIGRKYTLMFGFSGYIIFGLIIG 353
Cdd:cd17364 209 DIAFYGQNLFQSTIISAIgfsktmNAYQELFNIAVGQLIIALAGTVPGYWFTVFLIDRIGRKKIQMMGFFGMTIFLLILA 288
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  354 CAYDQLKKITPLFIIFYAFMNMLGNAGPGDMLGVISSEASATAVRGVFYGLSAVTGKIGSVVGVECFQPIRDNLGARWTF 433
Cdd:cd17364 289 GPYDHWKISTIGFFVLYGLTFFFSNFGPNTTTFIVPAEVFPARVRSTCHGISAASGKIGAIVGSFLFLSLTQNIGVRNVL 368
                       410       420
                ....*....|....*....|.
gi 6319941  434 IIAAICGLIGIIITYFFVPHS 454
Cdd:cd17364 369 IILAGVALLGIILTLLFPEEK 389
 
Name Accession Description Interval E-value
MFS_PhT cd17364
Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This ...
48-454 8.65e-136

Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of predominantly fungal and plant high-affinity inorganic phosphate transporters (PhT or PiPT), which are involved in the uptake, translocation, and internal transport of inorganic phosphate. They also function in sensing external phosphate levels as transceptors. Phosphate is crucial for structural and metabolic needs, including nucleotide and lipid synthesis, signalling and chemical energy storage. The Pht subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340922 [Multi-domain]  Cd Length: 389  Bit Score: 398.19  E-value: 8.65e-136
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   48 IIASGFALISDGYVNGSMSMLNKVFVMEYG--KKNYSSKVSTRVSNAALVGIIFGQFFMGIAADYYSRKSCILVATAILV 125
Cdd:cd17364   1 IIIAGMGFFTDAYDLFSISLVTKILGRLYYggKGSLPSGVSGLVNAAALVGTIIGQLFFGFLGDRFGRKRVYGVELIIMI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  126 IGSALCAASHGTTVPGMFWMLTVMRGLVGIGVGAEYPTSTLSANESANeyttTKRGGILVMVTNLPLAFGGPFATIIFLI 205
Cdd:cd17364  81 IGTILSALSPGSTPLGVMGWLIFFRFLLGIGIGGDYPLSATIMSEYAN----KKRRGALIAAVFAMQGFGILAGAIVTLI 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  206 VYKICSGT------KHLEAIWRTVFAIGCFWPLSVFYFRwktattevyekgrikrnipyflalkfywKRLLGTCGTWFMY 279
Cdd:cd17364 157 LSAIFEHPlpagtyHHADLVWRIVLGLGAIPALSVLYFR----------------------------KHLLGTAGTWFLL 208
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  280 DFVTFPNGIFSSTIISSV------IKDQNDLVKVAEWNLLLGVLAVLGVPIGAYLSDRIGRKYTLMFGFSGYIIFGLIIG 353
Cdd:cd17364 209 DIAFYGQNLFQSTIISAIgfsktmNAYQELFNIAVGQLIIALAGTVPGYWFTVFLIDRIGRKKIQMMGFFGMTIFLLILA 288
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  354 CAYDQLKKITPLFIIFYAFMNMLGNAGPGDMLGVISSEASATAVRGVFYGLSAVTGKIGSVVGVECFQPIRDNLGARWTF 433
Cdd:cd17364 289 GPYDHWKISTIGFFVLYGLTFFFSNFGPNTTTFIVPAEVFPARVRSTCHGISAASGKIGAIVGSFLFLSLTQNIGVRNVL 368
                       410       420
                ....*....|....*....|.
gi 6319941  434 IIAAICGLIGIIITYFFVPHS 454
Cdd:cd17364 369 IILAGVALLGIILTLLFPEEK 389
Sugar_tr pfam00083
Sugar (and other) transporter;
46-466 1.30e-85

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 271.45  E-value: 1.30e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941     46 VTIIAS--GFALISDGYVNGSMSMLNKVFVMEYGKKNYSSKVS-----TRVSNAALVGIIFGQFFMGIAADYYSRKSCIL 118
Cdd:pfam00083   1 VALVAAlgGFLFGYDTGVIGAFLTLIDFFKNFGLSKSVSSLAAlsvlsGLIVSIFSVGCFIGSLFAGKLGDRFGRKKSLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    119 VATAILVIGSALCAASHGTtvpGMFWMLTVMRGLVGIGVGAEYPTSTLSANESAneyTTTKRGgILVMVTNLPLAFGGPF 198
Cdd:pfam00083  81 IANVLFVIGAVLQGAAKGK---WSVYQLIVGRVLVGIGVGGASVLAPMYISEIA---PKKLRG-ALGSLYQLAITFGILL 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    199 ATIIFLIVyKICSGTK------HLEAIWR-TVFAIGCFWPLSVFYFRWKT---ATTEVYEKGR-----IKRNIPYFLALK 263
Cdd:pfam00083 154 AYIFGLGL-NKTSNSDgwriplGLQLVPAlLLIIGLLFLPESPRWLVEKGrleEAREVLAKLRgvpdvDRELDEIKDSLE 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    264 F-------YWKRLLGTCG------TWFMYDFVTFPNGIFSSTIISSVIKDQNDLVKVAEWNLLLGVLAVLGVPIGAYLSD 330
Cdd:pfam00083 233 AgqeaekaSWKELFSTKTrrqrllIGVMLQIFQQLTGINAIFYYSTTIFENLGLSDSFLVTIIVGVVNFVFTFIAIFLVD 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    331 RIGRKYTLMFGFSGYIIFGLIIGC-AYDQLKK---ITPLFIIFYAFMNMLGNAGPGDMLGVISSEASATAVRGVFYGLSA 406
Cdd:pfam00083 313 RFGRRPLLLLGAAGMAICFVILGIvALLGVSKsdwAGIVAIVFIALFIAFFAMGWGPVPWVIVSELFPLSVRSKAMALAT 392
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    407 VTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGIIITYFFVPHSLESDLMKQDVEF 466
Cdd:pfam00083 393 AANWLANFLIGFLFPIITDAIGLGYTFFIFAGLLVLFIIFVFFFVPETKGRTLEEIDELF 452
2A0109 TIGR00887
phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the ...
42-459 3.03e-26

phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). [Transport and binding proteins, Anions]


Pssm-ID: 129965 [Multi-domain]  Cd Length: 502  Bit Score: 111.74  E-value: 3.03e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941     42 WKNIVTIIASGFALISDGYVNGSMSMLNKVFVMEY--GKKNYSSKVSTRVSNAALVGIIFGQFFMGIAADYYSRKSCILV 119
Cdd:TIGR00887  12 WQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYyhGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGM 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    120 ATAILVIGSALCAASHGTTVPGMFWMLTVMRGLVGIGVGAEYPTSTLSANEsaneYTTTKRGGILVMVTNLPLAFGGPFA 199
Cdd:TIGR00887  92 ELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSE----FATKKWRGAMMAAVFAMQGFGILAG 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    200 TIIFLIV-------------YKICSGT--KHLEAIWRTVFAIGCFWPLSVFYFRWKTATTEVY----------------- 247
Cdd:TIGR00887 168 AIVALIVlagfkhsleaaadEASCTGScvPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYtadvakdveqaasdmsa 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    248 ------------------EKGRIKRNIPYFLALKFYWKR---LLGTCGTWFMYDFVTFPNGIFSSTIISSV---IKDQ-- 301
Cdd:TIGR00887 248 vlqvkieaepdevekastAVEVPKASWSDFFTHFFKWRHgkhLLGTAGSWFLLDIAFYGVNLNQKVILSAIgysPPAAtn 327
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    302 ---NDLVKVAEWNLLLGVLAVLgvP---IGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAYDQLKkiTPLFIIFYAFMNM 375
Cdd:TIGR00887 328 nayEELYKTAVGNLIIALAGTV--PgywVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLS--THGFLAIYVLAQF 403
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    376 LGNAGPGDMLGVISSEASATAVRGVFYGLSAVTGKIGSVVGVECFQPIRDNLGARWTF----------IIAAICGLIGII 445
Cdd:TIGR00887 404 FANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYptgiwmghvlEIFALFMFLGIL 483
                         490
                  ....*....|....
gi 6319941    446 ITyFFVPHSLESDL 459
Cdd:TIGR00887 484 FT-LLIPETKGKSL 496
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
89-452 6.08e-20

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 91.47  E-value: 6.08e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   89 VSNAALVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGttvpgmFWMLTVMRGLVGIGVGAEYPTSTLSA 168
Cdd:COG2271  50 LASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLLWGLATLLFGFATS------FWQLLLLRFLLGLGEAGFFPAALKLI 123
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  169 NESaneYTTTKRG---GILVMVTNLPLAFGGPFATIIFLIVykicsGtkhleaiWRTVFAIGCfwplsvfyfrwktatte 245
Cdd:COG2271 124 AEW---FPPKERGralGIFNAGGPLGGALAPPLLGWLLAAF-----G-------WRAAFLILG----------------- 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  246 vyekgrikrnIPYFLALKFywkRLLGTCGTWFMYDFVTFPNGIFSSTIISSVIkdQNDLVKVAEWNLLLGVLAVLGVPIG 325
Cdd:COG2271 172 ----------LPGLLLALL---RFWLLALAYFLVYFALYGFLTWLPTYLVEVR--GLSLAQAGLLLSLPFLAGIVGSLLG 236
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  326 AYLSDRIGR--KYTLMFGFSGYIIFGLIIGCAYDqlkkiTPLFIIFYAFMnMLGNAGPGDMLGVISSEASATAVRGVFYG 403
Cdd:COG2271 237 GWLSDRLGRrrKLVLAIGLLLAALALLLLALLPS-----PALAIALLFLA-GFGLGGAFGLLWALAAELFPKKARGTASG 310
                       330       340       350       360
                ....*....|....*....|....*....|....*....|....*....
gi 6319941  404 LSAVTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGIIITYFFVP 452
Cdd:COG2271 311 LVNTFGFLGGALGPLLVGYLLDATGYQAAFLLLAALALLAALLALLLLR 359
PRK12307 PRK12307
MFS transporter;
86-457 1.39e-06

MFS transporter;


Pssm-ID: 237051 [Multi-domain]  Cd Length: 426  Bit Score: 50.70  E-value: 1.39e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    86 STRVSNAALVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGttvpgmFWMLTVMRGLVGIGVGAEYPTST 165
Cdd:PRK12307  55 GAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASG------VIMLTLSRFIVGMGMAGEYACAS 128
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   166 LSANESANEYTTTKRGGILVM---VTNLPLAFGGPfatiIFLIVYKicsgtkhleaiWRTVFAIGCFWPLSVFYFRWKTA 242
Cdd:PRK12307 129 TYAVESWPKHLKSKASAFLVSgfgIGNIIAAYFMP----SFAEAYG-----------WRAAFFVGLLPVLLVIYIRARAP 193
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   243 TTEVYEKGRIK---------RNIPYFLALKFYWKRLLGTCGTWFMYDFVTFPNGIFSSTIISSVIKDQN-DLVKVAEWNL 312
Cdd:PRK12307 194 ESKEWEEAKLSgkgkhsqsaWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGfDTGVVSNLMT 273
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   313 LLGVLAVLGVPIGAYLSDRIGRKYTLMFGfsgyIIFGLIIGCAYDQLKKITPLFIIFYAFMNMLGNAGPGDMLGVISSEA 392
Cdd:PRK12307 274 AAAFGTVLGNIVWGLCADRIGLKKTFSIG----LLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDY 349
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6319941   393 SATAVR----GVFYGLSAVTGKIGSVVGVecFQPIRDNLGARWTFIIAAICGLIgIIITYFFVPHSLES 457
Cdd:PRK12307 350 FPLEVRglgtGLIYNLAATSGTFNSMAAT--WLGITMGLGAALTFIVAFWTATI-LLIIGLSIPDRLKA 415
 
Name Accession Description Interval E-value
MFS_PhT cd17364
Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This ...
48-454 8.65e-136

Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of predominantly fungal and plant high-affinity inorganic phosphate transporters (PhT or PiPT), which are involved in the uptake, translocation, and internal transport of inorganic phosphate. They also function in sensing external phosphate levels as transceptors. Phosphate is crucial for structural and metabolic needs, including nucleotide and lipid synthesis, signalling and chemical energy storage. The Pht subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340922 [Multi-domain]  Cd Length: 389  Bit Score: 398.19  E-value: 8.65e-136
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   48 IIASGFALISDGYVNGSMSMLNKVFVMEYG--KKNYSSKVSTRVSNAALVGIIFGQFFMGIAADYYSRKSCILVATAILV 125
Cdd:cd17364   1 IIIAGMGFFTDAYDLFSISLVTKILGRLYYggKGSLPSGVSGLVNAAALVGTIIGQLFFGFLGDRFGRKRVYGVELIIMI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  126 IGSALCAASHGTTVPGMFWMLTVMRGLVGIGVGAEYPTSTLSANESANeyttTKRGGILVMVTNLPLAFGGPFATIIFLI 205
Cdd:cd17364  81 IGTILSALSPGSTPLGVMGWLIFFRFLLGIGIGGDYPLSATIMSEYAN----KKRRGALIAAVFAMQGFGILAGAIVTLI 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  206 VYKICSGT------KHLEAIWRTVFAIGCFWPLSVFYFRwktattevyekgrikrnipyflalkfywKRLLGTCGTWFMY 279
Cdd:cd17364 157 LSAIFEHPlpagtyHHADLVWRIVLGLGAIPALSVLYFR----------------------------KHLLGTAGTWFLL 208
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  280 DFVTFPNGIFSSTIISSV------IKDQNDLVKVAEWNLLLGVLAVLGVPIGAYLSDRIGRKYTLMFGFSGYIIFGLIIG 353
Cdd:cd17364 209 DIAFYGQNLFQSTIISAIgfsktmNAYQELFNIAVGQLIIALAGTVPGYWFTVFLIDRIGRKKIQMMGFFGMTIFLLILA 288
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  354 CAYDQLKKITPLFIIFYAFMNMLGNAGPGDMLGVISSEASATAVRGVFYGLSAVTGKIGSVVGVECFQPIRDNLGARWTF 433
Cdd:cd17364 289 GPYDHWKISTIGFFVLYGLTFFFSNFGPNTTTFIVPAEVFPARVRSTCHGISAASGKIGAIVGSFLFLSLTQNIGVRNVL 368
                       410       420
                ....*....|....*....|.
gi 6319941  434 IIAAICGLIGIIITYFFVPHS 454
Cdd:cd17364 369 IILAGVALLGIILTLLFPEEK 389
Sugar_tr pfam00083
Sugar (and other) transporter;
46-466 1.30e-85

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 271.45  E-value: 1.30e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941     46 VTIIAS--GFALISDGYVNGSMSMLNKVFVMEYGKKNYSSKVS-----TRVSNAALVGIIFGQFFMGIAADYYSRKSCIL 118
Cdd:pfam00083   1 VALVAAlgGFLFGYDTGVIGAFLTLIDFFKNFGLSKSVSSLAAlsvlsGLIVSIFSVGCFIGSLFAGKLGDRFGRKKSLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    119 VATAILVIGSALCAASHGTtvpGMFWMLTVMRGLVGIGVGAEYPTSTLSANESAneyTTTKRGgILVMVTNLPLAFGGPF 198
Cdd:pfam00083  81 IANVLFVIGAVLQGAAKGK---WSVYQLIVGRVLVGIGVGGASVLAPMYISEIA---PKKLRG-ALGSLYQLAITFGILL 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    199 ATIIFLIVyKICSGTK------HLEAIWR-TVFAIGCFWPLSVFYFRWKT---ATTEVYEKGR-----IKRNIPYFLALK 263
Cdd:pfam00083 154 AYIFGLGL-NKTSNSDgwriplGLQLVPAlLLIIGLLFLPESPRWLVEKGrleEAREVLAKLRgvpdvDRELDEIKDSLE 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    264 F-------YWKRLLGTCG------TWFMYDFVTFPNGIFSSTIISSVIKDQNDLVKVAEWNLLLGVLAVLGVPIGAYLSD 330
Cdd:pfam00083 233 AgqeaekaSWKELFSTKTrrqrllIGVMLQIFQQLTGINAIFYYSTTIFENLGLSDSFLVTIIVGVVNFVFTFIAIFLVD 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    331 RIGRKYTLMFGFSGYIIFGLIIGC-AYDQLKK---ITPLFIIFYAFMNMLGNAGPGDMLGVISSEASATAVRGVFYGLSA 406
Cdd:pfam00083 313 RFGRRPLLLLGAAGMAICFVILGIvALLGVSKsdwAGIVAIVFIALFIAFFAMGWGPVPWVIVSELFPLSVRSKAMALAT 392
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    407 VTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGIIITYFFVPHSLESDLMKQDVEF 466
Cdd:pfam00083 393 AANWLANFLIGFLFPIITDAIGLGYTFFIFAGLLVLFIIFVFFFVPETKGRTLEEIDELF 452
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
48-445 4.37e-27

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 111.92  E-value: 4.37e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   48 IIASGFALISDGYVNGSMSMLnKVFVMEYGKKNYSSKVSTRVSNAALVGIIFGQFFMGIAADYYSRKSCILVATAILVIG 127
Cdd:cd17316   1 LLLAGLGWFFDAYDFFLIGFV-APVLAAEFSLGLSLLQTGLLFAAGFLGRPIGALLFGYLGDRIGRKKALILTLLLFGLA 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  128 SALCAAShgttvPGmFWMLTVMRGLVGIGVGAEYPTSTLSANESAneyTTTKRGGILVMvtnlpLAFGGPFATIIFLIVY 207
Cdd:cd17316  80 TLLIGLL-----PT-PILLLVLRFLQGIGIGGEYPGASTYVAEFA---PSKRRGFALGL-----LQSGWALGALLAALVA 145
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  208 KICSGTKHLEAIWRTVFAIGCFWPLSVFYFRwktattevyekgrikrnipyflalkfywKRLLGTCGTWFMYDFVTFPNG 287
Cdd:cd17316 146 SLLIPLLSGDWGWRILFLIGALPALLALLLR----------------------------RRTLLLILLWFFISFGYYGLT 197
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  288 IFSSTIISSVIKdqNDLVKVAEWNLLLGVLAVLGVPIGAYLSDRIGRKYTLMFGFSGYIIFGLIIGcaydQLKKITPLFI 367
Cdd:cd17316 198 TFLPTYLQTVLG--LSPATSSLYLLLISLGALVGALIAGLLSDRIGRKKTLVIGLILSGILALPLF----YLLSGSPTLL 271
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  368 IFYAFMNMLGNAGPGDMLGVISSEASATAVRGVFYGLSAVTGKIGSVVGVECFQPIRDNLG----ARWTFIIAAICGLIG 443
Cdd:cd17316 272 LLLLFILSFFVGGVWGALYAYLAELFPTEVRATGVGLSYNLGRLGGGGAPPLIALLLASTGgtgvPALILALLAIVALIV 351

                ..
gi 6319941  444 II 445
Cdd:cd17316 352 AL 353
2A0109 TIGR00887
phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the ...
42-459 3.03e-26

phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). [Transport and binding proteins, Anions]


Pssm-ID: 129965 [Multi-domain]  Cd Length: 502  Bit Score: 111.74  E-value: 3.03e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941     42 WKNIVTIIASGFALISDGYVNGSMSMLNKVFVMEY--GKKNYSSKVSTRVSNAALVGIIFGQFFMGIAADYYSRKSCILV 119
Cdd:TIGR00887  12 WQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYyhGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGM 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    120 ATAILVIGSALCAASHGTTVPGMFWMLTVMRGLVGIGVGAEYPTSTLSANEsaneYTTTKRGGILVMVTNLPLAFGGPFA 199
Cdd:TIGR00887  92 ELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSE----FATKKWRGAMMAAVFAMQGFGILAG 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    200 TIIFLIV-------------YKICSGT--KHLEAIWRTVFAIGCFWPLSVFYFRWKTATTEVY----------------- 247
Cdd:TIGR00887 168 AIVALIVlagfkhsleaaadEASCTGScvPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYtadvakdveqaasdmsa 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    248 ------------------EKGRIKRNIPYFLALKFYWKR---LLGTCGTWFMYDFVTFPNGIFSSTIISSV---IKDQ-- 301
Cdd:TIGR00887 248 vlqvkieaepdevekastAVEVPKASWSDFFTHFFKWRHgkhLLGTAGSWFLLDIAFYGVNLNQKVILSAIgysPPAAtn 327
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    302 ---NDLVKVAEWNLLLGVLAVLgvP---IGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAYDQLKkiTPLFIIFYAFMNM 375
Cdd:TIGR00887 328 nayEELYKTAVGNLIIALAGTV--PgywVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLS--THGFLAIYVLAQF 403
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    376 LGNAGPGDMLGVISSEASATAVRGVFYGLSAVTGKIGSVVGVECFQPIRDNLGARWTF----------IIAAICGLIGII 445
Cdd:TIGR00887 404 FANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYptgiwmghvlEIFALFMFLGIL 483
                         490
                  ....*....|....
gi 6319941    446 ITyFFVPHSLESDL 459
Cdd:TIGR00887 484 FT-LLIPETKGKSL 496
MFS_GLUT_like cd17315
Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator ...
59-452 3.20e-23

Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily; This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340873 [Multi-domain]  Cd Length: 365  Bit Score: 101.11  E-value: 3.20e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   59 GYVNGSMSMLNKVFVMEYgkknySSKVSTRVSNAALVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGtt 138
Cdd:cd17315  14 GVINGALLYIAKDLGFGL-----STSLQGLVVSSLLLGAAIGSLFGGPLADRFGRRKSLLIAAVLYVIGALLSALAPN-- 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  139 vpgmFWMLTVMRGLVGIGVGAEYPTSTLSANESAneytTTKRGGILVMVTNLPLAFGGPFAtiiFLIVYKICSGTKHLea 218
Cdd:cd17315  87 ----VWVLIVGRFLLGLGVGLASVLVPLYISEIA----PAKIRGALGTLNQLMITFGILLA---YLLGLALSLSPPGW-- 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  219 iWRTVFAIGCFWPLsvfyfrwktattevyekgrikrnipyFLALKFYWK---RLLGTCGTWFMYDFVTFPNGI--FSSTI 293
Cdd:cd17315 154 -WRLMFALAAVPAL--------------------------LQLLLMFFLpesRALLVGVGLQLLQQLTGINAVmyYAPTI 206
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  294 ISSVIKDQNDL---VKVAEWNLLLGVlavlgvpIGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAY-----DQLKKI--- 362
Cdd:cd17315 207 FKSAGGGTASIlasIIVGVVNLLATL-------VAIRLVDKVGRRPLLLIGFAGMAASLLLLAIAFllpalAKAAGWlal 279
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  363 --TPLFIIFYAFmnmlgnaGPGDMLGVISSEASATAVRGVFYGLSAVTGKIGSVVGVECFQPIRDNLGARWTFIIAAICG 440
Cdd:cd17315 280 lgILLYIAAFAM-------GAGPVPWLLLSEIFPLRIRGKGMAIATLVNWIFNFIVGLTFLIMVSTIGLAGVFIFFAAVC 352
                       410
                ....*....|..
gi 6319941  441 LIGIIITYFFVP 452
Cdd:cd17315 353 LLALVFVFFFVP 364
MFS_HMIT_like cd17360
H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; ...
59-452 2.07e-22

H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of myo-inositol/inositol transporters and similar transporters from vertebrates, plant, and fungi. The human protein is called H(+)-myo-inositol cotransporter/Proton myo-inositol cotransporter (HMIT), or H(+)-myo-inositol symporter, or Solute carrier family 2 member 13 (SLC2A13). HMIT is classified as a Class 3 GLUT (glucose transporter) based on sequence similarity with GLUTs, but it does not transport glucose. It specifically transports myo-inositol and is expressed predominantly in the brain, with high expression in the hippocampus, hypothalamus, cerebellum and brainstem. HMIT may be involved in regulating processes that require high levels of myo-inositol or its phosphorylated derivatives, such as membrane recycling, growth cone dynamics, and synaptic vesicle exocytosis. Arabidopsis Inositol transporter 4 (AtINT4) mediates high-affinity H+ symport of myo-inositol across the plasma membrane. The HMIT-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340918 [Multi-domain]  Cd Length: 362  Bit Score: 98.50  E-value: 2.07e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   59 GYVNGSMSMLNKvfvmEYGKKNYSSKVSTRVSNAALVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGtt 138
Cdd:cd17360  14 GVISGALLYIKD----DLGEVVLSTGWQELIVSSTVAGAAVGAAIGGWLNDRFGRRPCILLADALFTIGAIVMAAAPN-- 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  139 vpgmFWMLTVMRGLVGIGVGAEYPTSTLSANESAneyTTTKRGGiLVMVTNLPLAFGGpfatiifLIVYKICSGTKHLEA 218
Cdd:cd17360  88 ----KEVLIVGRVLVGLGVGIASMTVPLYIAEAA---PPRIRGR-LVTINVLFITGGQ-------FVAYVINGAFSYLPG 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  219 IWRTVFAIGCFWPL---SVFYFrwktatteVYEKGRIKRNIpyflalkfywKRLLGTCGTWFMYDFVTFpNGI--FSSTI 293
Cdd:cd17360 153 GWRWMLGLAAVPAVlqfIGLLF--------LPESPRWPSTR----------RALIVGCGLQAFQQFSGI-NTVmyYSATI 213
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  294 ISSV-IKDQndlvKVAEWNLLLGVLAVLGVPI-GAYLSDRIGRKYTLMFGFSGyIIFGLIIGCAYDQLKKITpLFIIFYA 371
Cdd:cd17360 214 LQMAgFKDN----QNAIWLSLIVAGTNFIFTIvGMYLIDKFGRRKLLLISLFG-VIVALVVLAVWLALVGLI-LYLAFFA 287
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  372 fmnmlgnAGPGDMLGVISSEASATAVRGVFYGLSAVTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGIIITYFFV 451
Cdd:cd17360 288 -------PGMGPVPWTVNSEIYPLWARGTGGGCAAAVNWVFNLLVSQTFLTLTQAIGPYGTFLLFAGLAVLGLIFIYFCV 360

                .
gi 6319941  452 P 452
Cdd:cd17360 361 P 361
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
89-452 6.08e-20

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 91.47  E-value: 6.08e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   89 VSNAALVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGttvpgmFWMLTVMRGLVGIGVGAEYPTSTLSA 168
Cdd:COG2271  50 LASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLLWGLATLLFGFATS------FWQLLLLRFLLGLGEAGFFPAALKLI 123
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  169 NESaneYTTTKRG---GILVMVTNLPLAFGGPFATIIFLIVykicsGtkhleaiWRTVFAIGCfwplsvfyfrwktatte 245
Cdd:COG2271 124 AEW---FPPKERGralGIFNAGGPLGGALAPPLLGWLLAAF-----G-------WRAAFLILG----------------- 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  246 vyekgrikrnIPYFLALKFywkRLLGTCGTWFMYDFVTFPNGIFSSTIISSVIkdQNDLVKVAEWNLLLGVLAVLGVPIG 325
Cdd:COG2271 172 ----------LPGLLLALL---RFWLLALAYFLVYFALYGFLTWLPTYLVEVR--GLSLAQAGLLLSLPFLAGIVGSLLG 236
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  326 AYLSDRIGR--KYTLMFGFSGYIIFGLIIGCAYDqlkkiTPLFIIFYAFMnMLGNAGPGDMLGVISSEASATAVRGVFYG 403
Cdd:COG2271 237 GWLSDRLGRrrKLVLAIGLLLAALALLLLALLPS-----PALAIALLFLA-GFGLGGAFGLLWALAAELFPKKARGTASG 310
                       330       340       350       360
                ....*....|....*....|....*....|....*....|....*....
gi 6319941  404 LSAVTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGIIITYFFVP 452
Cdd:COG2271 311 LVNTFGFLGGALGPLLVGYLLDATGYQAAFLLLAALALLAALLALLLLR 359
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
36-413 7.86e-20

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 90.80  E-value: 7.86e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   36 TSKKDKWKNIVTIIASGFALISDGY-VNGSMSMLNKVFvmeygkkNYSSKVSTRVSNAALVGIIFGQFFMGIAADYYSRK 114
Cdd:COG2814   3 ATPRRRWLALLALALGAFLSGLGIGiVLPALPLIAADL-------GASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRR 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  115 SCILVATAILVIGSALCAASHGttvpgmFWMLTVMRGLVGIGVGAEYPTSTLSANESANEYTTTKRGGILVMVTNLPLAF 194
Cdd:COG2814  76 RVLLLGLLLFALGSLLCALAPS------LWLLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPAL 149
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  195 GGPFATIIFLIVYkicsgtkhleaiWRTVFAI-GCFWPLSVFYFRWKTATTEVYEKGRIKRNIPYFlalkFYWKRLLGTC 273
Cdd:COG2814 150 GPLLGGLLADLFG------------WRWVFLVnAVLALLALLLLLRLLPESRPAARARLRGSLREL----LRRPRLLLLL 213
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  274 GTWFMYDFVTFPNGIFSSTIISSVIkdQNDLVKVAEWNLLLGVLAVLGVPIGAYLSDRIGRKYTLMFGFSGYIIFGLIIG 353
Cdd:COG2814 214 LLAFLLGFGFFALFTYLPLYLQEVL--GLSASAAGLLLALFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLLA 291
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  354 CAYdqlkkiTPLFIIFYAFMNMLGNAGPGDMLGVISSEASATAVRGVFYGLSAVTGKIGS 413
Cdd:COG2814 292 LAG------SLWLLLLALFLLGFGFGLLFPLLQALVAELAPPEARGRASGLYNSAFFLGG 345
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
92-450 1.39e-19

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 90.71  E-value: 1.39e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   92 AALVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGttvpgmFWMLTVMRGLVGIGVGAEYPTSTLSANES 171
Cdd:COG2223  48 IPVLVGALLRIPLGFLVDRFGPRRVLLIGLLLLGIGLLLLALAVS------YWLLLLLGLLLGIGGGGSFAVGIALVSKW 121
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  172 aneYTTTKRG---GILVMVTNLPLAFGGPFATIIFLIVykicsGtkhleaiWRTVFAI-GCFWPLSVFYFRWKTATTEVY 247
Cdd:COG2223 122 ---FPPDRRGlalGLAAGGGNLGAAVAAFLAPLLIAAF-----G-------WRNAFLIlGILLLVVAVLAWLFLRDPPAG 186
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  248 EKGRIKRNIPYFLAL----KFYWkrllgtcgTWFMYdFVTFPNGIFSSTIISSVIKDQ--NDLVKVAEWNLLLGVLAVLG 321
Cdd:COG2223 187 AAAAAKASLRDQLEAlrdpRFWL--------LSLLY-FGTFGSFIGFSSWLPPYLVDQfgLSAATAGLLAALFALLGALG 257
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  322 VPIGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAYDQLKKITPLFIIFYAFMNMlGNAGPGDMLGVISSEASATAVrgvf 401
Cdd:COG2223 258 RPLGGWLSDRIGGRRVLLIVFALMALGLLLLALALGSLWLFLVLFLLLGLALGG-GNGAVFALVPDIFPTKNAGAV---- 332
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|
gi 6319941  402 YGLSAVTGKIGSVVGVECFQPIRDNLGA-RWTFIIAAICGLIGIIITYFF 450
Cdd:COG2223 333 YGLVGAAGGLGGFLGPLLFGALLDATGSyTAAFLVFAVLALVALVLTLLL 382
MFS_1 pfam07690
Major Facilitator Superfamily;
89-416 1.30e-17

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 84.01  E-value: 1.30e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941     89 VSNAALVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGttvpgmFWMLTVMRGLVGIGVGAEYPTSTLSA 168
Cdd:pfam07690  37 LLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASS------LWLLLVLRVLQGLGAGALFPAALALI 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    169 NESANEYTTTKRGGILVMVTNLPLAFGGPFATIIFLIVYkicsgtkhleaiWRTVFAIGCFWPL--SVFYFRWKTATTEV 246
Cdd:pfam07690 111 ADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLFG------------WRAAFLILAILSLlaAVLLLLPRPPPESK 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    247 YEKGRIKRNIPYFLALKFYWKRLLgtcgTWFMYDFVTFPNGIFS-STIISSVIKDQN-DLVKVAEWNLLLGVLAVLGVPI 324
Cdd:pfam07690 179 RPKPAEEARLSLIVAWKALLRDPV----LWLLLALLLFGFAFFGlLTYLPLYQEVLGlSALLAGLLLGLGGLLGAIGRLL 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    325 GAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAYDQLkkiTPLFIIFYAFMNMLGNAGPGDMLGVISSEASATAVRGVFYGL 404
Cdd:pfam07690 255 LGRLSDRLGRRRRLLLALLLLILAALGLLLLSLTL---SSLWLLLALLLLGFGFGLVFPALNALVSDLAPKEERGTASGL 331
                         330
                  ....*....|..
gi 6319941    405 SAVTGKIGSVVG 416
Cdd:pfam07690 332 YNTAGSLGGALG 343
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
52-448 3.25e-16

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 80.16  E-value: 3.25e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   52 GFALISDGYVNGSMSMLNKVFVMEYGkkNYSSKVSTRVSNAALVGIIFgQFFMGIAADYYSRKSCILVATAILVIGSALC 131
Cdd:cd06174   2 LLGFFLTGLARGLISPLLPALLQSFG--LSASQLGLLFALFSLGYALL-QPLAGLLADRFGRRPVLLLGLLLFALGALLF 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  132 AASHGttvpgmFWMLTVMRGLVGIGVGAEYPTSTLSANESANEYTTTKRGGILVMVTNLPLAFGGPFATIIFLivykics 211
Cdd:cd06174  79 AFAPS------FWLLLLGRFLLGLGSGLIDPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILAS------- 145
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  212 gtkHLEAIWRTVFAIGCFWPLSVFYFRW------KTATTEVYEKGRIKRNIPYFLALkFYWKRLLGTCGTWFMYDFVTFp 285
Cdd:cd06174 146 ---SLGFGWRAVFLIAAALALLAAILLLlvvpdpPESARAKNEEASSKSVLKLLKRV-LKNPGLWLLLLAIFLVNLAYY- 220
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  286 ngIFSSTIISSVIKDQNDLVKVAEWNLLLGV-LAVLGVPIGAYLSDR-IGRKYTLMFGFSGYIIFgLIIGCAYDQLKKIT 363
Cdd:cd06174 221 --SFSTLLPLFLLDLGGLSVAVAGLLLSLFGlAGALGSLLLGLLSDRlIGRKPLLLIGLLLMALG-LALLLLAPSLLLLL 297
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  364 PLFIIFYAFMnmlgnAGPGDMLGVISSEASATAVRGVFYGLSAVTGKIGSVVGVECFQPIRD-NLGARWTFIIAAICGLI 442
Cdd:cd06174 298 LLLLLLGFGL-----GGLLPLSFALIAELFPPEIRGTAFGLLNTFGFLGGAIGPLLAGFLLAaTFGLTGAFLVLAVLLLL 372

                ....*.
gi 6319941  443 GIIITY 448
Cdd:cd06174 373 AAILLL 378
MFS_XylE_like cd17359
D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This ...
89-452 3.32e-15

D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340917 [Multi-domain]  Cd Length: 383  Bit Score: 77.22  E-value: 3.32e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   89 VSNAALVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGttvpgmFWMLTVMRGLVGIGVGAEYPTSTLSA 168
Cdd:cd17359  41 VVSSALLGAAIGALFAGRLADRFGRRKTLLISAVLFFISALGSAFSPN------FTIFIIARIIGGLAVGGASALVPMYI 114
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  169 NESAneyTTTKRGGiLVMVTNLPLAFGGPFATIIFLIVYKICSGTKHLEAIWRTVFAIGCFwPLSVFYF---------RW 239
Cdd:cd17359 115 AEVA---PAEIRGR-LVSLNQLMIVFGQLLAYIVNYLIANAGGADWLGAEGWRWMLGLEAI-PAILFLLgmlfipespRW 189
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  240 ktatteVYEKGRikrnipyflalkfywKRLLGTCGTWFMYDFVTFpNGIF--SSTIISSVIKDQNDlvkVAEWNLLLGVL 317
Cdd:cd17359 190 ------LVSKGK---------------PILIIGIGLAIFQQFVGI-NVIFyyGPEIFQNAGFSENA---ALLQTIGIGVV 244
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  318 AVLGVPIGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAY--DQLKKITPLFII-----FYAFMNMLGNAGPGDMLgvisS 390
Cdd:cd17359 245 NVIFTIIAILLVDKVGRKPLLLIGSIGMAISLLLIGTAFyfAPGSQASGIVALvlillFVAFFAMSWGPVTWVLL----S 320
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6319941  391 EASATAVRGVFYGLSAVTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGIIITYFFVP 452
Cdd:cd17359 321 EIFPNRIRGLAMGIAVFFLWIANFLVSLTFPILLAAFGLAFTFLIFAVICVLAFLFVWKFVP 382
SP TIGR00879
MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of ...
26-452 3.66e-13

MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273317 [Multi-domain]  Cd Length: 481  Bit Score: 71.60  E-value: 3.66e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941     26 DAERRATRTETSKKDKWKNIVTIIASGFALISDGYVNGSMS------MLNKVFVMEYGKKNYSSKVSTRVSnAALVGIIF 99
Cdd:TIGR00879   8 DASELLVTPAGLGSTYWKVALLSLIAAIGGLMFGYDTGVIGgalalpAFEFKFTSANSDSYSSSLWGLVVS-IFLVGGFI 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    100 GQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGTTVpgmFWMLTVMRGLVGIGVGAEYPTSTLSANESANEytttK 179
Cdd:TIGR00879  87 GALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALS---VEMLIVGRVLLGIGVGIASALVPMYLSEIAPK----A 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    180 RGGILVMVTNLPLAFGGPFATII-----FLIV---YKICSGtkhLEAIWRTVFAIGCFWPLSVFYF-------------- 237
Cdd:TIGR00879 160 LRGALTSLYQLAITFGILVAYGFgsgkvSLNNtlgWRIPLG---LQLIPAGLLFLGLFFLPESPRWlvgkgrveearksl 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    238 RWKTATT----------------EVYEKGRIKRNIPYFLALK--FYWKRLLGTCGTWF---------MYdfvtFPNGIFS 290
Cdd:TIGR00879 237 ARLRGTSgedkelldelelidikRSIEKRSVQPSWGSLFSSTrrIRRRLFLGVVLQWFqqftginaiMY----YSPTIFE 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    291 STIISSVIKDQNDLVkVAEWNLLLGVlavlgvpIGAYLSDRIGRKYTLMFGFSGYIIFGLIIGC-----AYDQLKKITPL 365
Cdd:TIGR00879 313 NAGVSTDHAFLVSII-VGAVNFAFTF-------VAIFLVDRFGRRPLLLIGAAGMAICLFVLGIlgasfVTGSSKSSGNV 384
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    366 FIIFYAFMNMLGNAGPGDMLGVISSEASATAVRGVFYGLSAVTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGII 445
Cdd:TIGR00879 385 AIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLI 464

                  ....*..
gi 6319941    446 ITYFFVP 452
Cdd:TIGR00879 465 FVYFFLP 471
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
34-247 6.65e-13

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 69.45  E-value: 6.65e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   34 TETSKKDKWKNIVTIIASGFALISDGY----VNGSMSMLNKVFvmeygkkNYSSKVSTRVSNAALVGIIFGQFFMGIAAD 109
Cdd:COG0477   2 SSTDAAPTRRRRRALLALALGTFLEGLdftiVNVALPSIAADL-------GASSAQLGWIVSAYLLGRAIGLLLFGRLGD 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  110 YYSRKSCILVATAILVIGSALCAASHGttvpgmFWMLTVMRGLVGIGVGAEYPTSTLSANESANEytttKRGGILVMVTN 189
Cdd:COG0477  75 RYGRKRVLLIGLLLFGLASLLCGLAPS------PELLIAARALQGIGAGGLMPGALALIAELFPA----RERGRALGLWG 144
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 6319941  190 LPLAFGGPFATIIFLIVykicsgtkhLEAI-WRTVFAIGCFWPLSVFYFRWKTATTEVY 247
Cdd:COG0477 145 AAIGLGLALGPLLGGLL---------VAALgWRWIFLINAPLGLLALVLRLRLPESRGL 194
MFS_KgtP cd17367
Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This ...
100-450 1.06e-12

Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This subfamily includes Escherichia coli alpha-ketoglutarate permease (KgtP) and similar proteins. KgtP is a constitutively expressed proton symporter that functions in the uptake of alpha-ketoglutarate across the boundary membrane. Also included is a putative transporter from Pseudomonas aeruginosa named dicarboxylic acid transporter PcaT. The KgtP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340925 [Multi-domain]  Cd Length: 407  Bit Score: 69.63  E-value: 1.06e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  100 GQFFMGIAADYYSRK-----SCILVATAILVIGsalCAASHGTTVPGMFWMLTVMRGLVGIGVGAEYPTSTLSANESANE 174
Cdd:cd17367  56 GGWLFGRLADRIGRRaaltlSVSLMAAGSLVIA---VTPTYATIGIWAPIILLLARLLQGLSVGGEYGTSATYLSEVAPP 132
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  175 ytttKRGGILVMVTNLPLAFGGPFATIIFLIVYKICSGTKHLEAIWRTVFAIGCFWPLSVFYFRWKTATTEVYE--KGRI 252
Cdd:cd17367 133 ----GRRGFYSSFQYVTLIGGQLLALGVLLVLQHTLGEDQMAAWGWRIPFLLGGVLAVVVLWLRRGLEETESFEaiAESN 208
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  253 KRNIPYFLALKFYWKRLLGTCG-----TWFMYDFVTFpngiFSSTIISSVIKDQNDlvkVAEWNLLLGVLAVLGVPIGAY 327
Cdd:cd17367 209 EASAGTLRELRRHPRELLLVVGltaggTLAFYTWTTY----LQKFLVNTAGFSKGD---ATWITTAALLVFMLLQPLGGR 281
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  328 LSDRIGRKYTLMFGFSGYIIFGLIIGCAYDQLKK-ITPLFIIFYAFMNMLGNAGpgdMLGVISSEASATAVR----GVFY 402
Cdd:cd17367 282 LSDRIGRRPLLLFFGIGGTLATVPLLSALDHTDSpYTAFALVLVGLVFLSGYTS---INAVVKAELFPTHVRalgvGLPY 358
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|
gi 6319941  403 GLS-AVTGKIGSVVGVEcFQPIrdnlGARWTFII-AAICGLIGIIITYFF 450
Cdd:cd17367 359 ALAvAIFGGTAPYVALW-LKSI----GHEWVFFWyVAGLIAISLVVYLRM 403
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
92-416 2.14e-12

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 68.92  E-value: 2.14e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941     92 AALVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGttvpgmFWMLTVMRGLVGIGVGAEYPtstlSANES 171
Cdd:TIGR00895  60 AGLIGMAFGALFFGPLADRIGRRRVLLWSILLFSVFTLLCALATN------VTQLLILRFLAGLGLGGLMP----NLNAL 129
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    172 ANEYTTTKRGGILVMVTNLPLAFGGPFATII--FLI-VYKicsgtkhleaiWRTVFAIGCFWPLSVFYFRWKT------- 241
Cdd:TIGR00895 130 VSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLagWLIpVFG-----------WRSLFYVGGIAPLLLLLLLMRFlpesidf 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    242 -----------------------ATTEVYEKGRIKRNIPYFLALKFYWKRLLGTCGTWFMYDFVTFpnGIFSSTI-ISSV 297
Cdd:TIGR00895 199 lvskrpetvrrivnaiapqmqaeAQSALPEQKSTQGTKRSVFKALFQGKTARITVLLWLLYFMLLV--GVYFLTNwLPKL 276
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    298 IKDQN-DLVKVAEWNLLLGVLAVLGVPIGAYLSDRIGRKYTlmfgFSGYIIFGLIIGCAYDQLKKITpLFIIFYAFMNML 376
Cdd:TIGR00895 277 MVELGfSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVT----ALLLLLGAVFAVLVGSTLFSPT-LLLLLGAIAGFF 351
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 6319941    377 GNAGPGdMLGVISSEASATAVRGVFYGLSAVTGKIGSVVG 416
Cdd:TIGR00895 352 VNGGQS-GLYALMALFYPTAIRATGVGWAIGIGRLGAIIG 390
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
89-453 2.41e-12

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 68.48  E-value: 2.41e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   89 VSNAALVGIIFGQFFmGIAADYYSRKSCILVATAILVIGSALCAashgttVPGMFWMLTVMRGLVGIGVGAEYPTSTLSA 168
Cdd:cd17371  40 GTVTLAGGAIGGILG-GILADRFGRVRVLVITILLFAVFTLLCG------FAQNYWQLLILRALAGLGFGGEWAAGAALM 112
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  169 NESANEYTTTKRGGILVMVTnlplAFGGPFATIIFLIVYKICSGtkhlEAIWRTVFAIGCFWPLSVFYFRWKTATTEVYE 248
Cdd:cd17371 113 AEYVPARHRGKALGYVQSGW----AVGWLLATLLAALLFPLLPP----EIAWRVLFLLGALPALLVLFIRRFVKEPPQWQ 184
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  249 KGRIKRNI--PYFLALKFYWKRLLGTCGTWFMydFVTFPNGIF--SSTIISSVIKDQNDL--VKVAEWNLLLGVLAVLGV 322
Cdd:cd17371 185 AARAARRHfaDRPSLRELFSPPLLRTTLLASL--LATGALGGYygITTWLPSYLTGERGLsfEGSAGYLVVTILGGFLGY 262
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  323 PIGAYLSDRIGRKYTLMFGFSGYIIFGLIigcaYDQLKKITPLFIIFYAFMNMLGNAGPGDMlGVISSEASATAVRGVFY 402
Cdd:cd17371 263 LAGGFLADRIGRRNNFALFALGSAISILL----YFFLPLSPTLILILGFPLGFFASGPFSGM-GAYLTELFPTAVRATAQ 337
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|.
gi 6319941  403 GLSAVTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGIIITYFFVPH 453
Cdd:cd17371 338 GFCYNVGRIIGALFPFLVGFLATSGSLGTAIAVFAAVYYIAGLVLALLLPE 388
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
323-457 1.74e-10

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 62.68  E-value: 1.74e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  323 PIGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAydqlkkITPLFIIFYAFMNMLGNAGPGDMLGVISSEASATAVRGVFY 402
Cdd:COG2814  63 PLAGRLADRFGRRRVLLLGLLLFALGSLLCALA------PSLWLLLAARFLQGLGAGALFPAALALIADLVPPERRGRAL 136
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*
gi 6319941  403 GLSAVTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGIIITYFFVPHSLES 457
Cdd:COG2814 137 GLLGAGLGLGPALGPLLGGLLADLFGWRWVFLVNAVLALLALLLLLRLLPESRPA 191
MFS_GLUT_Class1_2_like cd17357
Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This ...
45-452 1.76e-10

Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This subfamily includes Class 1 and Class 2 glucose transporters (GLUTs) including Solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1, also called glucose transporter type 1 or GLUT1), SLC2A2-5 (GLUT2-5), SLC2A7 (GLUT7), SLC2A9 (GLUT9), SLC2A11 (GLUT11), SLC2A14 (GLUT14), and similar proteins. GLUTs are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-5 are the most thoroughly studied and are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340915 [Multi-domain]  Cd Length: 447  Bit Score: 63.05  E-value: 1.76e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   45 IVTIIASGFALisdGYVNGSM--------SMLNKVFVMEYGKKNYSSKVSTRVS---NAALVGIIFGQFFMGIAADYYSR 113
Cdd:cd17357   2 VIVAFGGSFQF---GYNIGVVnapqevfkEFINDTLVDRYGLNLSDSELDLLWSlivSIFFIGGAIGSFISAFLANRFGR 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  114 KSCILVATAILVIGSALCAASHGTTvpgMFWMLTVMRGLVGIGVGAEYPTSTLSANESANE---------YTTTKRGGIL 184
Cdd:cd17357  79 KNGLLISNALLVVSSLLMFLSKSAK---SPELLIFGRFLVGIACGLSTGFVPMYLQEISPSelrgalgslTQIGVTLGIL 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  185 V-----------MVTNLP--LAFGGPFATIIFLIVYKICSGTKHL-------EAIWRTVFaigcfwplsvFYFRWKTATT 244
Cdd:cd17357 156 LgqvfglpsvlgTETLWPylLFFPGIPALLQLAALPFFPESPKFLliskgdeEEAEKSLK----------FLRGIEDDVD 225
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  245 EVYEKGRI--KRNIPY-------FLALKFYWKRLLGTCGTWFMYDFVTFPNGIFSSTiisSVIKDQNDLVKVAEW-NLLL 314
Cdd:cd17357 226 QELEEIKKesEQMGDQkqvslmqLLRDPSLRLPLLLVLVVSASQQFSGINAIFFYST---FIFENAGFSPQLAEWaNLGI 302
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  315 GVLAVLGVPIGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAYDQLKKITPL-------FIIFYAFMNMlgnaGPGDMLGV 387
Cdd:cd17357 303 GIVNVLSTIVGPFLIEKVGRRPLLLISLSVCAVALLLMSVFLFLSEQNSWMsygcivaIFLFIFFFAI----GLGPIPWF 378
                       410       420       430       440       450       460
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 6319941  388 ISSEASATAVRGVFYGLSAVTGKIGSVVGVECFQPIRDNLGArWTFIIAAICGLIGIIITYFFVP 452
Cdd:cd17357 379 IGAELFPQAPRSAAQSLGSSVNWTSNFIVGMAFPPLQSIGGG-FVFIIFAIPCALFLLYLYRYLP 442
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
87-447 6.17e-10

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 60.68  E-value: 6.17e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   87 TRVSNAALVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGttvpgmFWMLTVMRGLVGIGVGAEYPTS-T 165
Cdd:cd17365  37 GPVGSAALFGMAIGALLAGPLADRFGRKRVLLVSVALFGLFTLLTAFAQS------VLQLALLRFLTGLGLGAAMPNAiT 110
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  166 LSAnesanEYTTTKRGGILVMVTNLPLAFGGPFATIIFLIVykicsgtkhLEAI-WRTVFAIGCFWPLSVFYFRWKTatt 244
Cdd:cd17365 111 LVS-----EYAPARRRSLAVTLMFCGYPLGAALGGFLAAAL---------IPAFgWRSVFLLGGVPPLILLPLLRGT--- 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  245 evyekgrikrnipyflalkfywkrlLGTCGTWFMydfvtfpnGIFSSTIISSVIKdqnDLVKVAEWNLLLGVLAVLGVPI 324
Cdd:cd17365 174 -------------------------LLLWVTFFM--------GLLLVYLLNSWLP---KLMVEAGYSLSQALTITLLLNI 217
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  325 GA--------YLSDRIGRKYTLMFGFSGYIIFGLIIGCAYDQLkkitPLFIIFYAFMNMLGNAGPGDMLGViSSEASATA 396
Cdd:cd17365 218 GGvigslllgWLADRFGPKRVLALFFALGAVSLALLGVSPASL----VLLYVLVFLAGACVNGAQVGLYAL-AARFYPTE 292
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 6319941  397 VRGVFYGLSAVTGKIGSVVGvecfqP------IRDNLGARWTFIIAAICGLIGIIIT 447
Cdd:cd17365 293 VRATGVGWALGVGRLGAILG-----PllggllLAAGLGPESVFLALAIPAALGALAV 344
MFS_SLC22 cd17317
Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major ...
94-450 3.63e-09

Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily; The Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340875 [Multi-domain]  Cd Length: 331  Bit Score: 58.36  E-value: 3.63e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   94 LVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAAShgttvpGMFWMLTVMRGLVGIGvgaeYPTSTLSANESAN 173
Cdd:cd17317  35 FLGVLIGSLLFGYLADRFGRRPVLLLGLVLQIVCGVLSAFS------PSYELFLVLRFLVGVT----SAGIFTVGFVLGM 104
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  174 EYTTTKRGGILVMVTNLPLAFGgpfaTIIFLIVYKICSGtkhleaiWRTV-FAIGCFWPLSVFYFRWktattevyekgri 252
Cdd:cd17317 105 EIVGPKYRSFVGILFGLFWALG----YMLLALLAYLIRD-------WRWLqLAISLPGLLFLLLLWW------------- 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  253 krnIPyflalkfywKRLLGTCGTWFMYDFV---------TFPNGIFSSTIISSVIKdqndlvkvaewnlllgvlaVLGVP 323
Cdd:cd17317 161 ---LP---------RRTIIVGLIWFVTSLVyyglslnssNLGGNLYLNFFLSGLVE-------------------IPAYF 209
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  324 IGAYLSDRIGRKYTLMFGFsgyIIFGLIIGCAYDQLKKITPLFIIFyAFMNMLGNAGPGDMLGVISSEASATAVRGVFYG 403
Cdd:cd17317 210 LALLLLDRLGRRWTLSGSL---LLAGLACLVTALLPDDENTLALTL-ALVGKFAISAAFSVIYLYTAELYPTVVRNTGVG 285
                       330       340       350       360
                ....*....|....*....|....*....|....*....|....*..
gi 6319941  404 LSAVTGKIGSVVGVecFQPIRDNLGARWTFIIAAICGLIGIIITYFF 450
Cdd:cd17317 286 LCSTVARVGAILAP--FIVLLGKIGPLLPLIIFGVLALLGGLLTLLL 330
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
91-451 4.39e-09

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 58.36  E-value: 4.39e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   91 NAALVGIIFG---------QFFMGIAADYYSRKSCILVATAILVIGSALCAASHGttvpgmFWMLTVMRGLVGIGVGAEY 161
Cdd:cd17325  29 SVAQIGLIVAayalaqllfSPPAGRLSDRFGRKRLLLLGLLLLAVSTLLFAFATS------YWQLLLARFLQGLASAAVW 102
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  162 PTSTLSAnesANEYTTTKRG---GILVMVTNLPLAFGGPFATII-----FLIVYKICSgtkhleaiwrtVFAIGCFWPls 233
Cdd:cd17325 103 PAAMALI---ADIAPPEERGramGIFSSAIGLGFLIGPLLGGLLadalgYRAPFLVCA-----------ALALLALVL-- 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  234 VFYFRWKTATTEVYEKGRIKRNIPYFLALkFYWKRLLGTCGTWFmydFVTFPNGIFSsTIISSVIKDQNDL--VKVAEWN 311
Cdd:cd17325 167 ALLLLPEPRPPPNKRAVSAARLRSGLRLL-LRDRRLLALFLAIF---VLAFAFGALE-PFLPLYAAELGGLspAQIGLLF 241
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  312 LLLGVLAVLGVPIGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAYdqlkkiTPLFIIFYAFMNMLGNAGPGDMLGVISSE 391
Cdd:cd17325 242 GAQGLASALSQPPAGKLSDRIGRKPLILIGLLLSAVALLLLPLAT------SFWLLLLLLALLGLGLGLVFPATLALLAD 315
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 6319941  392 ASATAVRGVFYGLSAVTGKIGSVVGvecfqP-----IRDNLGARWTFIIAAICGLIGIIITYFFV 451
Cdd:cd17325 316 IVPPEGRGTAMGLFNTAFSLGMVLG-----PllggfLYDAFGFATPFLAAAALLLLAAVLFLLLR 375
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
91-450 5.50e-09

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 58.37  E-value: 5.50e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   91 NAALVGIIFG---------QFFMGIAADYY-----SRKSCILVATAILVIGSALCAASHGTTVPGMFWMLTVMRGLVGIG 156
Cdd:COG2211  44 SAALVGLILLvarlwdaitDPLIGALSDRTrtrwgRRRPWILIGAIPLALSFVLLFTAPDLSPTGKLIYALVTYLLLGLA 123
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  157 VGAEY-PTSTLSAnesanEYTTTKRG-GILVMVTNLPLAFGGPFATIIFLIVYKICSGTKHleAIWRTVFAI-GCFWPLS 233
Cdd:COG2211 124 YTLVNiPYSALGA-----ELTPDYEErTRLSSWRFAFAGLGGLLASVLPPPLVAAFGGDAA--LGYRLTALIfAVLGLLA 196
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  234 VF--YFRWKTATTEVYEKGRIKRNIPYFLALKfYWKRLLGTCGTWFMYDFVTFPNGIFsstIISSVIKDQNDLVKVAewN 311
Cdd:COG2211 197 FLltFFGTKERPVPEEEKVSLKESLKALLKNR-PFLLLLLAYLLFFLALALVAALLLY---YFKYVLGLSAALVGLL--L 270
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  312 LLLGVLAVLGVPIGAYLSDRIGRKYTLMFGFSGYIIFGLIIgcAYDQLKKITPLFI------IFYAFMNMLGNAgpgdML 385
Cdd:COG2211 271 ALYFLAALLGAPLWPRLAKRFGKKKAFIIGLLLAALGLLLL--FFLGPGNLWLLLVlaalagIGLGAILVLPWA----ML 344
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  386 G-VISSEASATAVR--GVFYGLSAVTGKIGSVVGV--------------ECFQPIRDNLGARWTF-IIAAICGLIGIIIT 447
Cdd:COG2211 345 AdVVDYDEWKTGRRreGLYFGIFTFAIKLGQALAGalaglllalfgyvaGAAQSPSALTGIRLLFfLLPAVLLLLAALLL 424

                ...
gi 6319941  448 YFF 450
Cdd:COG2211 425 LFY 427
MFS_ShiA_like cd17369
Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This ...
96-416 6.56e-09

Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340927 [Multi-domain]  Cd Length: 408  Bit Score: 57.92  E-value: 6.56e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   96 GIIFGQFfmgiaADYYSRKScILVATaILVIGSALCA-------ASHGTTVPGMfwmLTVMRGLVGIGVGAEYPTSTLSA 168
Cdd:cd17369  61 GVVFGHF-----GDRIGRKK-TLVLT-LLLMGIATFLigllptyAQIGILAPIL---LVLLRLLQGLALGGEWGGAVLMA 130
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  169 NESANEytttKRGGILVMVTNLPLAFGGPFATIIFLIVYKICSGTKHLEAIWRTVFAIGCFWPLSVFYFRWKTATTEVYE 248
Cdd:cd17369 131 VEHAPP----KRRGFYGSFPQLGAPVGLLLATGVFLLLSALLSDEAFLSWGWRIPFLLSAVLVAVGLYIRLRLEETPVFR 206
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  249 KGRIKR---NIPYFLALKFYWKRLLGTCGTWF-----MYDFVTFpnGIFSSTIISSVIKDQ-NDLVKVAewnlllGVLAV 319
Cdd:cd17369 207 RAKEAGqvvRAPLVEVLRRHWRALLLAIGLRLaenvlFYLFTTF--ALSYATQTLGVDRSTvLLAVLIA------SVVAA 278
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  320 LGVPIGAYLSDRIGRKYTLMFGFSGYIIFGLiigcAYDQLKKITPLFIIFYAFMnMLGNAGPGDMLGVISS---EASATA 396
Cdd:cd17369 279 ITIPLFGWLSDRVGRRPVYLAGALLAALFAF----PFFWLLDTGSTWLIVLAAV-VVLGVLHGMMYGPQAAflaELFPTR 353
                       330       340
                ....*....|....*....|
gi 6319941  397 VRgvfYGLSAVTGKIGSVVG 416
Cdd:cd17369 354 VR---YTGASLGYQLGAILG 370
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
95-452 1.34e-08

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 57.20  E-value: 1.34e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   95 VGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHgttvpgMFWMLTVMRGLVGIGVGAEYPTSTLSANESAne 174
Cdd:cd17358  52 LGALIGALLSGKLADRIGRKRTLLISAIPCILGWLLIAFAK------DVWMLYLGRFLAGFGGGAASVVVPVYIAEIA-- 123
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  175 yTTTKRGGILVMVTnLPLAFGgpfatiiFLIVYKICSgtkHLEaiWRTVFAIGCFWPL---SVFYF-----RW-----KT 241
Cdd:cd17358 124 -PKNVRGALGSLNQ-LLVNIG-------ILLGYVLGS---FLP--WRTLALIGAIPPVvflILLFFipespRWlakkgRE 189
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  242 ATTEV---YEKGRIKRNIPYFLALKFYWKRLLGTCGTWFMYDFVTFPN-----------------GIFSSTIISSVIKDQ 301
Cdd:cd17358 190 EEAEKslqFLRGKDADISKEAAEIQEELAELEKEAKESSFSDLFQRKYlkplviglglmlfqqlsGINAVIFYASSIFDE 269
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  302 NDLVKVAEWNLLLGVLA-VLGVPIGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAY-----DQLKKITPLF-IIFYAFMN 374
Cdd:cd17358 270 AGSGLDPNTATIIIGVVqVVGTLVATLLVDRLGRRPLLLVSAIGMGIGLLALGLYFylqehGALLSSVSWLpLVGLVIYI 349
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6319941  375 MLGNAGPGDMLGVISSEASATAVRGVFYGLSAVTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGIIITYFFVP 452
Cdd:cd17358 350 ISFSIGLGPLPWVIMSEIFPAKIKGLAGSLVTLVNWLFAFIVTKTFPFLTLAWGASGTFWIFAGICGLALVFVLLFVP 427
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
323-450 1.45e-08

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 56.36  E-value: 1.45e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  323 PIGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAydqlkkITPLFIIFYAFmnMLGNAGPGDMLGVIS--SEASATAVRGV 400
Cdd:COG0477  67 LLFGRLGDRYGRKRVLLIGLLLFGLASLLCGLA------PSPELLIAARA--LQGIGAGGLMPGALAliAELFPARERGR 138
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
gi 6319941  401 FYGLSAVTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGIIITYFF 450
Cdd:COG0477 139 ALGLWGAAIGLGLALGPLLGGLLVAALGWRWIFLINAPLGLLALVLRLRL 188
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
95-451 2.96e-07

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 52.61  E-value: 2.96e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   95 VGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHgttvpgMFWMLTVMRGLVGIGVGAEYPTSTLSAnesANE 174
Cdd:cd17329  46 VAGIVASLIGGRLADRFGRKPVMLAGLLLRALGFALLGFAH------SPWLFAIALVLTGFGGGLFEPASEAMI---ADV 116
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  175 YTTTKRGGILVMV---TNLPLAFGGPFATIIFLIVYkicsgtkhleaiwRTVFAIG-----CFWPLSVFYFRWKTATTEV 246
Cdd:cd17329 117 TTPENRTRAFSLLywaINLGVAIGPLLGGLLLLYSF-------------RLLFLAAavlflLAALVLLFLLPETRPKRRA 183
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  247 YEKGRIKRNIPYFLALKFYWKRLLGTCGTWFMYDFVTFPNGIFSSTIISSVIKD------QNDLVKVAewnlllgvlavL 320
Cdd:cd17329 184 AEKTEILRGYKIVLRDRAFLLFLLASFLISLIYFQLESTLPVYVVEILGLGESLlglllaLNALLIVL-----------L 252
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  321 GVPIGAYLSdRIGRKYTLMFGFSGYIIFGLIIGCAydqlkKITPLFIIFYAFMNMlgnagpGDMLGVISSEASATAV--- 397
Cdd:cd17329 253 QFPVARLVE-RFRLRKILMIGILLFAIGFAVLAFA-----NTLAVLILAMIVLTL------GEMLVFPAVQTLVAALapp 320
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 6319941  398 --RGVFYGLSAVTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGIIITYFFV 451
Cdd:cd17329 321 dkRGSYMGFYALAWGLGRAIGPLVGGLLLDLLGPGLPWLILAALGLIAAALLLGLQ 376
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
94-450 3.06e-07

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 52.57  E-value: 3.06e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   94 LVGIIFgQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGttvpgmFWMLTVMRGLVGIGVGAEYPTSTLSANESan 173
Cdd:cd17474  45 LPAAVL-MPVAGVLADRFGRKKVLLPGLLLFGIGGLLCGLSDS------FALLLAGRALQGIGAAGLGPLALTLIGDL-- 115
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  174 eYTTTKRGGILvmvtnlplafgGPFATIIFL--IVYKICSGTkhLEAI-WRTVFAI-GCFWPLSVFYFRWKtatteVYEK 249
Cdd:cd17474 116 -FEGGERAKAM-----------GLYEAALGLgiAVGPLLGGL--LAAIsWRYPFFLlAALIPVAFLAILFL-----LPEP 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  250 GRIKRNIPYFLALK----FYWKRLLGTCGTWFMYDFVTFPNGIFSSTIISsvikdqNDLVKVAEWNLLLGVLAVLGVPIG 325
Cdd:cd17474 177 KEKAKSSSATKLRDlkkaLRGRGLLTFLVSAFLYFFLYFAFLTYLPFLLE------LLYGISPIIIGLLFAGWSVLLALG 250
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  326 AY-----LSDRIGRKYTLMFGFSGYIIFGLIIGCAYDQlkkitPLFIIFYAFMNM-LGNAGPgdMLGVISSEASATAVRG 399
Cdd:cd17474 251 SLfvgrlLKKRFGARRILVIGLLLYALSLLLLGFVPSL-----ALLLIAIVLFGLgLGLNLP--LLTTLVTELAPEEERG 323
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|.
gi 6319941  400 VFYGLSAVTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGIIITYFF 450
Cdd:cd17474 324 TASSLYNFVRFLGQAVGPLLFGLLLEIFGLSAPFLVGAAIALAAAVLLALL 374
MFS_HXT cd17356
Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and ...
45-452 1.05e-06

Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and similar proteins; The fungal hexose transporter (HXT) subfamily is comprised of functionally redundant proteins that function mainly in the transport of glucose, as well as other sugars such as galactose and fructose. Saccharomyces cerevisiae has 20 genes that encode proteins in this family (HXT1 to HXT17, GAL2, SNF3, and RGT2). Seven of these (HXT1-7) encode functional glucose transporters. Gal2p is a galactose transporter, while Rgt2p and Snf3p act as cell surface glucose receptors that initiate signal transduction in response to glucose, functioning in an induction pathway responsible for glucose uptake. Rgt2p is activated by high levels of glucose and stimulates expression of low affinity glucose transporters such as Hxt1p and Hxt3p, while Snf3p generates a glucose signal in response to low levels of glucose, stimulating the expression of high affinity glucose transporters such as Hxt2p and Hxt4p. Schizosaccharomyces pombe contains eight GHT genes (GHT1-8) belonging to this family. Ght1, Ght2, and Ght5 are high-affinity glucose transporters; Ght3 is a high-affinity gluconate transporter; and Ght6 high-affinity fructose transporter. The substrate specificities for Ght4, Ght7, and Ght8 remain undetermined. The HXT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340914 [Multi-domain]  Cd Length: 403  Bit Score: 51.10  E-value: 1.05e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   45 IVTIIASgFALISDGYVNGSMS-MLNKVFVMEYGKKNYSSKVSTRVSNAALVGI-----IFGQFFMGIAADYYSRKSCIL 118
Cdd:cd17356   1 LLCAFVS-LGGFLFGYDTGSISgILNMKSFQKYFADNTGTYYPSSSRQGLIVSIvnlgsFFGALISSFLSDRIGRKKSIQ 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  119 VATAILVIGSALCAASHGTtvpgmFWMLTVMRGLVGIGVGAEYPTSTLSANESAneytTTKRGGILVMVTNLPLAFGGpf 198
Cdd:cd17356  80 IGCVIYIIGAIIQVAAIGK-----WYQLIVGRIIAGLGVGFASVLVPVYQSEVA----PKHIRGTLVSLYQLAITIGI-- 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  199 atiifLIVYKICSGTKHL--EAIWRTVFAIGCFWPLSVFYFRWKtatteVYEKGR-IKRNIpyFLALKFYWKRLLGTcgT 275
Cdd:cd17356 149 -----LVAYCINYGTHKLdgSAQWRIPLGLQIVWGLLLLIGMFF-----LPESPRwLYRTI--LGIMLQLFQQLTGI--N 214
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  276 WFMYDFVTFPNGI----FSSTIISSVIkdqnDLVKVAewnlllgvlavlGVPIGAYLSDRIGRKYTLMFGFSG-----YI 346
Cdd:cd17356 215 YFFYYGTTIFQSTgltgSSPLLTSIIL----YIVNFV------------STIPGLFFVDKFGRRTCLLIGAAGmsiclFI 278
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  347 IFGLIIGCAYDQLKKITP-------------LFIIFYAFmnmlgnaGPGDMLGVISSEASATAVRGVFYGLSAVTGKIGS 413
Cdd:cd17356 279 YAAVGVRYLIPNPQSGTSnksagngmivficLFIFSFAT-------TWGPIAWVYVAEVFPLRVRSKGMALATAFNWLWN 351
                       410       420       430       440
                ....*....|....*....|....*....|....*....|
gi 6319941  414 VVgVECFQP-IRDNLGArWTFIIAAICGLIGIIITYFFVP 452
Cdd:cd17356 352 FL-ISFFTPfIIGSIGF-KYYYIFAGCNLLAFIVVFFFVP 389
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
93-448 1.06e-06

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 50.63  E-value: 1.06e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   93 ALVGII---------FGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGttvpgmFWMLTVMRGLVGIGVGAEYPT 163
Cdd:cd17478  31 AQAGLLvsvfsitssLLQPLFGYLADRKPRRYLLPLGPLLTGLGLSLLGFAPN------YWLLLLLVALAGIGSAAFHPE 104
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  164 STLSANESANE--------YTTtkrGGIL------VMVTNLPLAFGGPFATIIFLIVykicsgtkhleaiwrTVFAIGCF 229
Cdd:cd17478 105 GARLASQAAGGrrglamsiFSV---GGNLgfalgpLIAAALVALFGGLGLLILLIIP---------------GLAVALLL 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  230 WPLSVFYFRWKTATTEVYEKGRIKRNIPYFLALKFywkrLLGTCGTWFMYDFVTF-P-------NGIFSSTIISSVIkdq 301
Cdd:cd17478 167 LRLRPLKKPEAKKAAAKSSARSTLKGVWRALLLLL----IIVFLRSWVLSSLTTFlPfylvqrgYSLVFAGLLLSLF--- 239
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  302 ndLVKVAewnlllgvlavLGVPIGAYLSDRIGRKYTLMFGFSGYIIFglIIGCAYDQLKKITPLFIIFYAFMNMlgnagP 381
Cdd:cd17478 240 --LFAGA-----------IGTLIGGPLSDRFGRRRVIIASLLLAAPF--LLLFLLTPGIWSYILLVLAGFLLFA-----S 299
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6319941  382 GDMLGVISSEA---SATAVRGVFYGLSAVTGKIGS-VVGVecfqpIRDNLGARWTFIIAAICGLIGIIITY 448
Cdd:cd17478 300 FPVTVVLAQELlpgNVGLASGLMMGLSFGLGGIGApVLGA-----LADAFGLESVLLILALLPLLGALLAF 365
MFS_1 pfam07690
Major Facilitator Superfamily;
323-454 1.12e-06

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 50.49  E-value: 1.12e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    323 PIGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAYDqlkkiTPLFIIFYAFMNMLGNAGPGDMLGVISS------EASATA 396
Cdd:pfam07690  50 PLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASS-----LWLLLVLRVLQGLGAGALFPAALALIADwfppeeRGRALG 124
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 6319941    397 VRGVFYGLSAVtgkIGSVVGVECFqpirDNLGARWTFIIAAICGLIGIIITYFFVPHS 454
Cdd:pfam07690 125 LVSAGFGLGAA---LGPLLGGLLA----SLFGWRAAFLILAILSLLAAVLLLLPRPPP 175
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
323-467 1.36e-06

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 50.50  E-value: 1.36e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  323 PIGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAYDqlkkITPLFI------IFYAFMNMLGNAgpgdMLGVISSEASATA 396
Cdd:cd06174  49 PLAGLLADRFGRRPVLLLGLLLFALGALLFAFAPS----FWLLLLgrfllgLGSGLIDPAVLA----LIADLFPERERGR 120
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6319941  397 VRGVFYGLSAVTGKIGSVVGVECFQPIRDNLgaRWTFIIAAICGLIGIIITYFFVPHSLESDLMKQDVEFH 467
Cdd:cd06174 121 ALGLLQAFGSVGGILGPLLGGILASSLGFGW--RAVFLIAAALALLAAILLLLVVPDPPESARAKNEEASS 189
PRK12307 PRK12307
MFS transporter;
86-457 1.39e-06

MFS transporter;


Pssm-ID: 237051 [Multi-domain]  Cd Length: 426  Bit Score: 50.70  E-value: 1.39e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    86 STRVSNAALVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGttvpgmFWMLTVMRGLVGIGVGAEYPTST 165
Cdd:PRK12307  55 GAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASG------VIMLTLSRFIVGMGMAGEYACAS 128
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   166 LSANESANEYTTTKRGGILVM---VTNLPLAFGGPfatiIFLIVYKicsgtkhleaiWRTVFAIGCFWPLSVFYFRWKTA 242
Cdd:PRK12307 129 TYAVESWPKHLKSKASAFLVSgfgIGNIIAAYFMP----SFAEAYG-----------WRAAFFVGLLPVLLVIYIRARAP 193
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   243 TTEVYEKGRIK---------RNIPYFLALKFYWKRLLGTCGTWFMYDFVTFPNGIFSSTIISSVIKDQN-DLVKVAEWNL 312
Cdd:PRK12307 194 ESKEWEEAKLSgkgkhsqsaWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGfDTGVVSNLMT 273
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   313 LLGVLAVLGVPIGAYLSDRIGRKYTLMFGfsgyIIFGLIIGCAYDQLKKITPLFIIFYAFMNMLGNAGPGDMLGVISSEA 392
Cdd:PRK12307 274 AAAFGTVLGNIVWGLCADRIGLKKTFSIG----LLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDY 349
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6319941   393 SATAVR----GVFYGLSAVTGKIGSVVGVecFQPIRDNLGARWTFIIAAICGLIgIIITYFFVPHSLES 457
Cdd:PRK12307 350 FPLEVRglgtGLIYNLAATSGTFNSMAAT--WLGITMGLGAALTFIVAFWTATI-LLIIGLSIPDRLKA 415
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
95-447 2.89e-06

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 49.47  E-value: 2.89e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   95 VGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGttvpgmFWMLTVMRGLVGIGVGAEYPTSTLSANESANE 174
Cdd:cd17324  45 LGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLLAALAPS------FALLLLARALAGLAHGGFWAIAAAYAADLVPP 118
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  175 yttTKRG---GILVMVTNLPLAFGGPFATIIflivykicsgtkhLEAI-WRTVF-AIGCFWPLSVFYFRWKTATTEVYEK 249
Cdd:cd17324 119 ---EKRGraiGLVFSGLTLGLVLGRPLGGLL-------------GQLLgWRAAFlAIAVLALLAALLLWRLLPSLPPKKP 182
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  250 GRIKRNIPYFLALKF--YWKRLLGTcGTWFMYDFVTFP--------NGIFSSTIISSVIKdqndLVKVAewnlllgvlAV 319
Cdd:cd17324 183 GSLGLLSSLLLLLRNprLRLAYLIT-FLLFGGFFALYTylapfltdVPGFSSSAIIGLLL----LFGVA---------GV 248
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  320 LGVPIGAYLSDRIGRKYTLM-FGFSGYIIFGLIIGCAYDQLkkITPLFIIFYAFMNMLGNAGPGdMLGVISSEASATAVr 398
Cdd:cd17324 249 VGSPLAGRLADRGGRRALLIaLLLLAAALLLLTLLGPSPLL--LLVGLVLWGLGFFAAHSALQT-RVLRLAPEARGLAS- 324
                       330       340       350       360
                ....*....|....*....|....*....|....*....|....*....
gi 6319941  399 GVFYGLSAVTGKIGSVVGVECFqpirDNLGARWTFIIAAICGLIGIIIT 447
Cdd:cd17324 325 SLYLAAYNLGGALGAALGGLVL----DHGGWAGVGWVGAALLLLALLLA 369
MFS_YajR_like cd17472
Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux ...
323-454 6.12e-06

Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli inner membrane transport protein YajR and some uncharacterized multidrug-efflux transporters. YajR is a putative proton-driven major facilitator superfamily (MFS) transporter found in many gram-negative bacteria. Unlike most MFS transporters, YajR contains a C-terminal, cytosolic YAM domain, which may play an essential role for the proper functioning of the transporter. YajR-like transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341025 [Multi-domain]  Cd Length: 371  Bit Score: 48.37  E-value: 6.12e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  323 PIGaYLSDRIGRKYTLMFGFSGYIIfGLIIgCAYDQlkkiTPLFIIFYAFMnmlgnAGPGDMLGVISSEAS--------- 393
Cdd:cd17472  51 PFG-LLSDRIGRKPVILFGLLLFIA-GSLL-AAYAT----SIYGLILGRAL-----QGSGAISSVVMALLAdltreenrt 118
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6319941  394 -ATAVRGVFYGLSAVTGKIGSVVgvecfqpIRDNLGARWTFIIAAICGLIGIIITYFFVPHS 454
Cdd:cd17472 119 kAMALIGASIGIAFAISMVLGPL-------LAAHLGVSGLFLITAILSLVSLLILLFFVPDP 173
PRK11551 PRK11551
putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
92-232 1.21e-05

putative 3-hydroxyphenylpropionic transporter MhpT; Provisional


Pssm-ID: 236927 [Multi-domain]  Cd Length: 406  Bit Score: 47.65  E-value: 1.21e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    92 AALVGIIFGQFFMGIAADYYSRKSCILVATA---ILVIGSALcAAShgttvpgmFWMLTVMRGLVGIGVGAEYPTSTLSA 168
Cdd:PRK11551  58 AGILGLLPGALLGGRLADRIGRKRILIVSVAlfgLFSLATAQ-AWD--------FPSLLVARLLTGVGLGGALPNLIALT 128
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 6319941   169 NESANEyttTKRG-GILVMVTNLPlaFGGPFATIIFLIvykicsGTKHLEaiWRTVFAIGCFWPL 232
Cdd:PRK11551 129 SEAVGP---RLRGtAVSLMYCGVP--FGGALASVIGVL------AAGDAA--WRHIFYVGGVGPL 180
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
94-159 1.25e-05

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 47.57  E-value: 1.25e-05
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 6319941   94 LVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGttvpgmFWMLTVMRGLVGIGVGA 159
Cdd:cd17320  44 LLGFALGQLLYGPLSDRFGRRPVLLAGLLLFILASLLCALASS------IEQLLIARFLQGLGAAA 103
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
323-457 1.50e-05

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 47.19  E-value: 1.50e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  323 PIGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAYdqlkkiTPLFIIFYAFMNMLGNAgpgdMLGVIS----SEASATAVR 398
Cdd:cd17325  49 PPAGRLSDRFGRKRLLLLGLLLLAVSTLLFAFAT------SYWQLLLARFLQGLASA----AVWPAAmaliADIAPPEER 118
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 6319941  399 GVFYGL-SAVTGkIGSVVGvecfqP-----IRDNLGARWTFIIAAICGLIGIIITYFFVPHSLES 457
Cdd:cd17325 119 GRAMGIfSSAIG-LGFLIG-----PllgglLADALGYRAPFLVCAALALLALVLALLLLPEPRPP 177
MFS_Azr1_MDR_like cd17502
Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance ...
105-165 1.84e-05

Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341045 [Multi-domain]  Cd Length: 337  Bit Score: 46.79  E-value: 1.84e-05
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6319941  105 GIAADYYSRKSCILVATAILVIGSALCAAShgttvPGMfWMLTVMRGLVGIGVGAEYPTST 165
Cdd:cd17502  51 GKLSDLFGRKWVLLIAIVIFELGSLLCGLA-----PNM-TMLIVGRAIQGIGGGGLMSLAF 105
MFS_SVOP cd17441
Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic ...
49-230 2.97e-05

Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein (SVOP) is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. This SVOP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340999 [Multi-domain]  Cd Length: 372  Bit Score: 46.34  E-value: 2.97e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   49 IASGFALISDGYVNGSMSMLNKVFVMEYGKKNYSSKVSTRVsnaALVGIIFGQFFMGIAADYYSRKSCILVATAILVIGS 128
Cdd:cd17441   2 ILTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSV---VFIGMMLSSSLWGNISDQYGRKTGLKISVLWTLYYG 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  129 ALCAAShgttvPGMFWMLtVMRGLVGIGVGAEYPTSTLSAnesanEYTTTKRGGILVMVTNLPLAFGGPFATIIFLIVYK 208
Cdd:cd17441  79 ILSAFA-----PIYSWIL-VLRGLVGFGIGGVPQSVTLYA-----EFLPMKSRAKCILLIEVFWALGTVFEVLLAVFVMP 147
                       170       180
                ....*....|....*....|....
gi 6319941  209 ICS--GTKHLEAIWRTVFAIGCFW 230
Cdd:cd17441 148 TLGwrWLLILSALPLLIFAVLCFW 171
MFS_TRI12_like cd06179
Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; ...
82-237 5.43e-05

Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; This family includes Fusarium sporotrichioides trichothecene efflux pump (TRI12), which may play a role in F. sporotrichioides self-protection against trichothecenes. TRI12 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340868 [Multi-domain]  Cd Length: 518  Bit Score: 45.70  E-value: 5.43e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   82 SSKVSTRVSNAALVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGTTvpgmfwMLTVMRGLVGIGVGAEy 161
Cdd:cd06179  30 PSSNSTWISTAWSLAQAVLGPIVGRLSDLFGRRWFFIGGNLLGVVGSIVAGTAKSVN------MLIGGQALIGIGAGTQ- 102
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6319941  162 ptstLSANESANEYTTTKRGGILVMVTNLPLAFGGPFATIIFLIVykicsgTKHLEAIWRTVFAIGC-FWPLSVFYF 237
Cdd:cd06179 103 ----GLGAAVASELVPNKYRGLVQGVVNLVASPGSALGPLIAGAL------VEANAAGWRWIFYINAiFNALALILL 169
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
95-459 5.72e-05

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 45.78  E-value: 5.72e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941     95 VGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAAShgttvPGmFWMLTVMRGLVGIGVGAEYPTStlsanesane 174
Cdd:TIGR00898 138 VGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS-----PN-YTVFLVFRLLVGMGIGGIWVQA---------- 201
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    175 ytttkrggILVMVTNLPLAFGGPFATII---FLIVYKICSGTKHLEAIWRT----------VFAIGCFW-PLSVfyfRW- 239
Cdd:TIGR00898 202 --------VVLNTEFLPKKQRAIVGTLIqvfFSLGLVLLPLVAYFIPDWRWlqlavslptfLFFLLSWFvPESP---RWl 270
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    240 --------------KTATT------------EVYEKGRIKRNIPYFLALKFYW---KRLLGTCGTWFMYDFVTFPNGIFS 290
Cdd:TIGR00898 271 isqgrieealkilqRIAKIngkklpaevlslSLEKDLSSSKKQYSFLDLFRTPnlrKTTLCLMMLWFTTAFSYYGLVLDL 350
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    291 STIISSVIKDQ--NDLVkvaEWNLLLgvlavlgvpIGAYLSDRIGRKYTLMFGFSGYIIFGLIIG-CAYDQLKKITPLFI 367
Cdd:TIGR00898 351 GNLGGNIYLDLfiSGLV---ELPAKL---------ITLLLIDRLGRRYTMAASLLLAGVALLLLLfVPVDLYFLRTALAV 418
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    368 IFYAFMNMLGNagpgdMLGVISSEASATAVRGVFYGLSAVTGKIGSVvgvecFQPIRDNLGARW---TFIIAAICGLIGI 444
Cdd:TIGR00898 419 LGKFGITSAFQ-----MVYLYTAELYPTVVRNLGVGVCSTMARVGSI-----ISPFLVYLGEKWlflPLVLFGGLALLAG 488
                         410
                  ....*....|....*
gi 6319941    445 IITyFFVPHSLESDL 459
Cdd:TIGR00898 489 ILT-LFLPETKGVPL 502
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
323-458 6.94e-05

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 45.25  E-value: 6.94e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  323 PIGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAYDqlkkiTPLFIIFYAFMNmLGNAGPGDMLGVISSEASATAVRGVFY 402
Cdd:cd17474  52 PVAGVLADRFGRKKVLLPGLLLFGIGGLLCGLSDS-----FALLLAGRALQG-IGAAGLGPLALTLIGDLFEGGERAKAM 125
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6319941  403 GLSAVTGKIGSVVGvecfqPIrdnLGA-------RWTFIIAAICGLIGIIITYFFVPHSLESD 458
Cdd:cd17474 126 GLYEAALGLGIAVG-----PL---LGGllaaiswRYPFFLLAALIPVAFLAILFLLPEPKEKA 180
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
92-450 8.24e-05

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 44.91  E-value: 8.24e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   92 AALVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGTTVPGMFWMLTVMrGLVGIGVGAEYPTSTLSANES 171
Cdd:cd06173  42 AFFLPFLLFSPFAGVLADRFDRRRLLILADLLRALLAAVLALLALLGSLSLWLLLVLA-FLLGIASAFFGPARQALLPEL 120
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  172 ANEYTTTKRGGILVMVTNLPLAFGGPFATIIFLivykicsgtkHLEAIWRTVFAIGCFWPLSVFYFRWKTATTEVyEKGR 251
Cdd:cd06173 121 VPKEQLVRANALNSLATQLARIIGPALGGLLVA----------LLGPGGAFAINALSFLLSALLLLFIRRPPPAA-PGES 189
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  252 IKRNIPYFLALKFYWKRLLGTCGTWFMYDFVTFPNGIFSSTIISSVikdqndlVKVAEWNLLLGVLAVLGVPIGA----- 326
Cdd:cd06173 190 SSLLLRDLREGLRYLRRSPLLRLLLLALALFALLGGALTVLLPLLA-------KEVLGGGAAGYGLLLAAFGVGAllgal 262
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  327 ---YLSDRIGRKYTLMFGFSGYIIFGLIIGcaydqLKKITPLFIIFYAFMnmlgnaGPGDMLGVISSEA-----SATAVR 398
Cdd:cd06173 263 llgRLSKRRRRGRLLLIGALLLGLALLVLG-----LSPSLWLLLAALFLL------GLAGGLFNVPLNTllqlrVPDELR 331
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|..
gi 6319941  399 GVFYGLSAVTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGIIITYFF 450
Cdd:cd06173 332 GRVFSVYNALNSGAMPLGALLAGLLADALGLSAVFLLAGALLLLAALLLLLL 383
MFS_NRT2_like cd17341
Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major ...
92-415 1.00e-04

Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major Facilitator Superfamily; This family is composed of plant NRT2 family high-affinity nitrate transporters as well as nitrate and nitrite transporters from bacteria including Bacillus subtilis nitrate transporter NasA and nitrite extrusion protein NarK, Staphylococcus aureus NarT, Synechococcus sp. nitrate permease NapA, Mycobacterium tuberculosis NarK2 and nitrite extrusion protein NarU. NRT2 family proteins are involved in the uptake of nitrate by plant roots from the soil through the high-affinity transport system (HATS). There are seven Arabidopsis thaliana NRT2 proteins, called AtNRT2:1 to AtNRT2:7. The NRT2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340899 [Multi-domain]  Cd Length: 384  Bit Score: 44.55  E-value: 1.00e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   92 AALVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGTtvpgmFWMLTVMRGLVGIGVGaeyptSTLSANES 171
Cdd:cd17341  42 IPVLAGALLRLPYGFLCDRFGGRRVFIASLLLLLIPLLALALAVSS-----YWGLLVLGFLLGFAGA-----NFASGQPW 111
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  172 ANEYTTTKRGGILVMVT----NLplafGGPFATIIFLIVYKICSGTKHLEAiWRTVFAIGCFW----PLSVFYFRWKTAT 243
Cdd:cd17341 112 ASFWFPKEKIGGAAGGIagagNM----GVAVSQLLAPLIAGAIVFDGGFVG-WRNAFFVPGILlaiaAVLVLLFGDDLPT 186
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  244 TEVYEKGRIKRnipyflalkfyWKRLLGTCGTWFM---YdFVTFPNGIFSSTIISSVIKDQNDLVKV--AEWNLLLGVLA 318
Cdd:cd17341 187 GKASALEFLKV-----------QLAVLKNYRTWILsllY-GVTFGSFVGFSNVLPTYFKTRFGLPLVtaGILAALFPLAG 254
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  319 VLGVPIGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAYDQLKKITPLFIIFYAFMNMLGNAGPGDMLGVISSEASATAvr 398
Cdd:cd17341 255 ALARPAGGWLSDRFGGRRRLWWLFIVMTIGAALLSLSLPTSGTNLVLFLALFVALGLGAGAGNGSVFRMVPFIFRREL-- 332
                       330
                ....*....|....*..
gi 6319941  399 GVFYGLSAVTGKIGSVV 415
Cdd:cd17341 333 GAVTGLVGAIGGLGGFF 349
PRK03893 PRK03893
putative sialic acid transporter; Provisional
92-227 1.19e-04

putative sialic acid transporter; Provisional


Pssm-ID: 179668 [Multi-domain]  Cd Length: 496  Bit Score: 44.69  E-value: 1.19e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    92 AALVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGttvpgmFWMLTVMRGLVGIGVGAEYPTSTLSANES 171
Cdd:PRK03893  63 AAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPG------YWTLFIARLVIGMGMAGEYGSSATYVIES 136
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 6319941   172 ANEYTTTKRGGILVMvtnlplafGGPFATIIFLIVYKICSGTKHleaiWRTVFAIG 227
Cdd:PRK03893 137 WPKHLRNKASGFLIS--------GFSIGAVVAAQVYSLVVPVWG----WRALFFIG 180
MFS_Tpo1_MDR_like cd17323
Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of ...
324-452 1.45e-04

Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of fungal multidrug resistance (MDR) transporters including several proteins from Saccharomyces cerevisiae such as polyamine transporters 1-4 (Tpo1-4), quinidine resistance proteins 1-3 (Qdr1-3), dityrosine transporter 1 (Dtr1), fluconazole resistance protein 1 (Flr1), and protein HOL1. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, Flr1 confers resistance to the azole derivative fluconazole while Tpo1 confers resistance and adaptation to quinidine and ketoconazole. The polyamine transporters are involved in the detoxification of excess polyamines in the cytoplasm. Tpo1-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340881 [Multi-domain]  Cd Length: 376  Bit Score: 44.10  E-value: 1.45e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  324 IGAYLSDRIGRKYTLMFGFSGYIIFGliIGCAydqLKKITPLFIIFYAFMNMLGNA----GPGDMLGVISSEASATAVrg 399
Cdd:cd17323  53 IWAPLSELYGRRPVYLVSLFIFVIFQ--IGCA---LAPNIAMLIILRFLQGFFGSSplaiGAGTIADLFTPEERGKAM-- 125
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 6319941  400 VFYGLSAVTGK-IGSVVGVEcfqpIRDNLGARWTFIIAAICGLIGIIITYFFVP 452
Cdd:cd17323 126 GVYSLGPLLGPaLGPIIGGF----ITQSLGWRWIFWFLAIISGFCLILIFLFLP 175
MFS_Tpo1_MDR_like cd17323
Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of ...
85-450 1.79e-04

Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of fungal multidrug resistance (MDR) transporters including several proteins from Saccharomyces cerevisiae such as polyamine transporters 1-4 (Tpo1-4), quinidine resistance proteins 1-3 (Qdr1-3), dityrosine transporter 1 (Dtr1), fluconazole resistance protein 1 (Flr1), and protein HOL1. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, Flr1 confers resistance to the azole derivative fluconazole while Tpo1 confers resistance and adaptation to quinidine and ketoconazole. The polyamine transporters are involved in the detoxification of excess polyamines in the cytoplasm. Tpo1-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340881 [Multi-domain]  Cd Length: 376  Bit Score: 43.72  E-value: 1.79e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   85 VSTRVSNAA----LVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGTtvpgmfWMLTVMRGLVGIGvgaE 160
Cdd:cd17323  31 VSEEVANLGvslfVLGFGLGPLIWAPLSELYGRRPVYLVSLFIFVIFQIGCALAPNI------AMLIILRFLQGFF---G 101
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  161 YPTSTLSANESANEYTTTKRGGILVMVTNLPLAfgGP-FATII--FLIVYKicsgtkhleaIWRTVFAI-----GCFWPL 232
Cdd:cd17323 102 SSPLAIGAGTIADLFTPEERGKAMGVYSLGPLL--GPaLGPIIggFITQSL----------GWRWIFWFlaiisGFCLIL 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  233 SVFYFrwktattevyekgrikrniPYFLALKFYWKRLLgtcGTWFMYdFVTFPN------------------GIFSSTII 294
Cdd:cd17323 170 IFLFL-------------------PIVLLLGLYVGLVY---AILYLF-LTAFPYvfgevygfspgevglmylPIGIGALI 226
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  295 SSVI------------KDQNDLVKVAEWNLLLGVLAVLGVPIGaylsdrigrkyTLMFGFSGY--------IIFGLIIGC 354
Cdd:cd17323 227 GSIIggrlsdyyyrrlKKKNGGKPEPEARLPPAFIGAFLFPIG-----------LFIFGWTIYphihwivpIIGSAFFGF 295
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  355 AydqlkkitpLFIIFYAFMNMLGNAGPGDMlgvisseASATAVrgvfyglSAVTGKIGSVVGVECFQPIRDNLGARWTFI 434
Cdd:cd17323 296 G---------LMLIFQSSLTYLVDSYPKYA-------ASALAA-------NTLVRSIFAAIFPLFAQPMFNNLGVGWAFT 352
                       410
                ....*....|....*.
gi 6319941  435 IAAICGLIGIIITYFF 450
Cdd:cd17323 353 LLAFISLAMIPIPFIF 368
2_A_01_02 TIGR00880
Multidrug resistance protein;
323-452 1.91e-04

Multidrug resistance protein;


Pssm-ID: 273318 [Multi-domain]  Cd Length: 141  Bit Score: 41.48  E-value: 1.91e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    323 PIGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAydqlKKITPLFI------IFYAFMNMLGNAGPGDM-----LGVISSE 391
Cdd:TIGR00880  16 PLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS----SNITVLIIarflqgFGAAFALVAGAALIADIyppeeRGVALGL 91
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6319941    392 ASATAVRGVFYGLSavtgkIGSVVGVEcfqpirdnLGARWTFIIAAICGLIGIIITYFFVP 452
Cdd:TIGR00880  92 MSAGIALGPLLGPP-----LGGVLAQF--------LGWRAPFLFLAILALAAFILLAFLLP 139
MFS_OFA_like cd17353
Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of ...
323-450 2.04e-04

Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340911 [Multi-domain]  Cd Length: 389  Bit Score: 43.75  E-value: 2.04e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  323 PIGAYLSDRIGRKYTlmfgfsgYIIFGLIIGCAYDQLKKITPLFIIFYAFMNMLGNAGpGDMLGVISS-------EASAT 395
Cdd:cd17353 267 PFWGWLSDKIGRKNT-------LSIAFLIQGVAMFLLPFIGSVAVLFVLGVALIGFCY-GGGFALFPAltadffgTKNAG 338
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 6319941  396 AVRGVFYglsavTGK-IGSVVGVECFQPIRDNLGARWTFIIAAICGLIGIIITYFF 450
Cdd:cd17353 339 TNYGLLY-----TAKgVGGLIGPIIAAYVLYTGGYNAAFIIAAALSLVALALALLL 389
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
95-450 2.63e-04

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 43.33  E-value: 2.63e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   95 VGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGttvpgmFWMLTVMRGLVGIGVGAEYPTSTLSAnesANE 174
Cdd:cd17473  46 LFIALFAPLAGWLADRFGRKRLLIAGLLLYGIGGVAGLFLDS------LYALLASRALLGIGVAGIMTLATALI---GDY 116
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  175 YTTTKRG---GILVMVTNLplafGGpfatIIFLIVykicSGtkHLEAI-WRTVFAI----GCFWPLsVFYFRWKTATTEV 246
Cdd:cd17473 117 FEGEERAkmlGLQSAAMSL----GG----VVFLLL----GG--ALAEIgWRAPFLVyllaLPVLIL-VLLFLPEPARKSK 181
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  247 YEKGRIKRNIPYFLALKFYWKRLLGTCGTWFMYDFVTF-P-----NGIFSSTIISSVIkdqndlvkvaewnlllgVLAVL 320
Cdd:cd17473 182 SAASPGAATAAALPWKRVLPIYFLAFLAMLLFYVIPIQlPfllqeRGGGSAALIGLAL-----------------AIASL 244
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  321 GVPIGAY----LSDRIGRKYTLMFGFSGYIIFGLIIGCAYDqlkkitPLFIIFYAFMNMLGN--AGPgdMLGVISSEASA 394
Cdd:cd17473 245 AGAIGALlfgrLKRRLGKRRLLAIGFALMALGFLLLALASG------LWVVLLGAILAGLGFglLLP--TLNSWAMSLVP 316
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 6319941  395 TAVRGVFYGLSAVTGKIGSVVGVECFQPIRDNLGARWT-FIIAAICGLIGIIITYFF 450
Cdd:cd17473 317 PELRGRAMGIVTSAFFLGQFLSPLVLGPLVNLTGGLSGaFLILGVLALVLAIVLLLL 373
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
323-446 3.41e-04

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 42.92  E-value: 3.41e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  323 PIGaYLSDRIGRKYTLMFGF----SGYIIFGLIIGCAYdqlkkITPLFIIFYAFMNMLGNAGPGDMLGVISSEASATAVr 398
Cdd:cd17370 253 PAG-RLSDRIGRKKLLILGYlslaLAYLGFALGSSLWL-----LLLGFILWGLYMGAQESIERAAVADLVPAELRGTAY- 325
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 6319941  399 GVFYGLSAVTGKIGSVV-GVecfqpIRDNLGARWTFIIAAICGLIGIII 446
Cdd:cd17370 326 GLFNTVVGIGWLLASLIaGY-----LWDLISPSAAFLFSAVLALIALLL 369
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
323-454 3.45e-04

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 42.92  E-value: 3.45e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  323 PIGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAYDqlkkiTPLFIIFYAFMNMLGNAGPGDMLGVISSEAS----ATAVR 398
Cdd:cd17324  52 LLLGPLSDRIERRRLLLVLLLLFILGNLLAALAPS-----FALLLLARALAGLAHGGFWAIAAAYAADLVPpekrGRAIG 126
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  399 GVFYGLSavtgkIGSVVGVecfqP----IRDNLGARWTFIIAAICGLIGIIITYFFVPHS 454
Cdd:cd17324 127 LVFSGLT-----LGLVLGR----PlgglLGQLLGWRAAFLAIAVLALLAALLLWRLLPSL 177
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
31-164 3.83e-04

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 42.93  E-value: 3.83e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   31 ATRTETSKKDKWKNIVTIIASGF--ALISdGYVNGSMSMLNKVFVMEYGkknYSSKVSTRVSNAALVGIIFGQFFMGIAA 108
Cdd:cd17477 172 APEIEEAESISLRRLLRIAPLALlgAFVA-GFLEGAFYSLLPLYGLRLG---LSVAQAALLLAAFVLGGLLLQWPLGWLA 247
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 6319941  109 DYYSRKSCILVATAILVIGSALcaashGTTVPGMFWMLTVMRGLVGIGVGAEYPTS 164
Cdd:cd17477 248 DRFDRRRVLLGCALLGALAALL-----LPLVPGLPLALLVLLFLWGGAAGPLYTLA 298
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
72-449 3.85e-04

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 42.57  E-value: 3.85e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   72 FVMEYGKKNYSSKVSTRVSNAALVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGttvpgmFWMLTVMRG 151
Cdd:cd17330  22 YVREFNKLGASGYYVGLLQSSYSLGQFLASPLWGRLSDRYGRKPVLLLSLAGSAVSYVLLGLSRN------LWLLFLARF 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  152 LVGIGVGAeYPTSTLSANESANEYTTTKRGGILVMVTNLPLAFG-----------GPFATIIFLIVYKICSgtkhLEAIW 220
Cdd:cd17330  96 LDGLTGGN-VSVAQAYIADITDEEERAKAFGIISAAFGLGFILGpalggflstpyGYALPFLVAAALALLN----LVLVL 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  221 RTVFAIgcFWPLSVFYFRWkTATTEVYEkgrikrNIPYFLALKFYW-KRLLGTCgtwFMYdfvtfpNGIFssTIISSVIk 299
Cdd:cd17330 171 FFLPPL--RRLLLVYFLIA-LAFAGLES------VFSLFLKDRFGFsPSQIGLL---LAL------VGIA--GILAQLL- 229
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  300 dqndlvkvaewnlllgvlavlgvpIGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAYDQlkKITPLFIIFYAFMNMLGNA 379
Cdd:cd17330 230 ------------------------LIPRLAKRLGERKLLRLGLLLAIIGLLLLPFASSV--PLLVLAAAILAFGTGIVFP 283
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  380 GPGDMLgvisSEASATAVRGVFYGLSAVTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGIIITYF 449
Cdd:cd17330 284 ALSALL----SKSVPSKEQGKAQGIIQSLQSLARIIGPLLAGPLYSFLGPGVPFLLAAGLLLIALFLLSL 349
PRK10406 PRK10406
alpha-ketoglutarate transporter; Provisional
100-238 5.60e-04

alpha-ketoglutarate transporter; Provisional


Pssm-ID: 182433 [Multi-domain]  Cd Length: 432  Bit Score: 42.49  E-value: 5.60e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   100 GQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGTTVPGMfW---MLTVMRGLVGIGVGAEYPTSTLSANESANEyt 176
Cdd:PRK10406  79 GGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGT-WapaLLLLARLFQGLSVGGEYGTSATYMSEVAVE-- 155
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6319941   177 ttKRGGILVMVTNLPLAFGGPFATIIFLIVYKICSGTKHLEAIWRTVFAIGCFWPLSVFYFR 238
Cdd:PRK10406 156 --GRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLR 215
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
324-456 5.70e-04

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 42.34  E-value: 5.70e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941    324 IGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCA--YDQLkkitplfiIFYAFMNMLGNAGPGDMLGVISSEASATAVRGVF 401
Cdd:TIGR00895  71 FFGPLADRIGRRRVLLWSILLFSVFTLLCALAtnVTQL--------LILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTA 142
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 6319941    402 YGLSAVTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGIIITYFFVPHSLE 456
Cdd:TIGR00895 143 VGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESID 197
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
323-452 7.44e-04

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 41.79  E-value: 7.44e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  323 PIGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAydqlkkITPLFIIFYAFMNMLGNAGPGD---MLGVISSEASATAVRG 399
Cdd:cd17330  52 PLWGRLSDRYGRKPVLLLSLAGSAVSYVLLGLS------RNLWLLFLARFLDGLTGGNVSVaqaYIADITDEEERAKAFG 125
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
gi 6319941  400 VFYGLSAVTGKIGSVVGvECFQPIrdnLGARWTFIIAAICGLIGIIITYFFVP 452
Cdd:cd17330 126 IISAAFGLGFILGPALG-GFLSTP---YGYALPFLVAAALALLNLVLVLFFLP 174
BtlA COG2270
MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction ...
324-452 7.44e-04

MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction only];


Pssm-ID: 441871 [Multi-domain]  Cd Length: 424  Bit Score: 42.06  E-value: 7.44e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  324 IGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAYDQlkkitplfIIFYAFMNMLGNAgpgdmLGVISSEASATAVR----- 398
Cdd:COG2270 293 LFGRLDDRIGPKRVILVSLVIWIVVCLAAYFLTTA--------LAFWILGLLIGLV-----MGGIQALSRSLLARlippg 359
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 6319941  399 --GVFYGLSAVTGKIGSVVGVECFQPIRDNLGA-RWTFIIAAICGLIGIIITyFFVP 452
Cdd:COG2270 360 reAEFFGLYALSGKAASFLGPLLFGLVTQLTGSqRLGILSLIVFFVIGLVLL-LRVK 415
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
91-449 7.62e-04

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 41.79  E-value: 7.62e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   91 NAALVGIIFGQFF---------MGIAADYYSRKsciLVATAILVIGSALCAAshgTTVPGMFWMLTVMRGLVGIGVGAEY 161
Cdd:cd17319  36 SPTQYGLIASAFFlgyalfqvpGGWLLDRFGAR---KVLAVSMLLWSLFTAL---TGFATSLTSLYVLRFLLGVAEAGFF 109
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  162 PTSTLSaneSANEYTTTKRG---GILVMVTNLPLAFGGPFATIIflivykicsgtkhLEAI-WRTVF----AIGCFWplS 233
Cdd:cd17319 110 PGAIKA---LAEWFPARERGratGLFNSGAPLGAAIGPPLSGWL-------------LLLFgWRWAFiiegLLGLLL--A 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  234 VFYFrwktattevyekgrikrnipyflalkFYWKRLLGTCGTWFMYDFVTFpngiFSSTIISSVIKDQN--DLVKVAEWN 311
Cdd:cd17319 172 VLWW--------------------------FYLRQVWGLALGYFGINYALY----GLLTWLPTYLKQARgfSLKQVGLLA 221
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  312 LLLGVLAVLGVPIGAYLSDRI---GRKYTLMFGFSGYIIFglIIGCAYDQLKKITPLFIIFYAFMNMLGNAG----PGDM 384
Cdd:cd17319 222 AIPFLAGAIGMILGGRLSDRLlrgARRLVIIIGLLLAAVG--LLLAYLTTSPVVAVILLSLAGFGIGAASPVfwslPADL 299
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6319941  385 LgviSSEASATAVrGVFYGLSAVTGKIGS-VVGVecfqpIRDNLGA-RWTFIIAAICGLIGIIITYF 449
Cdd:cd17319 300 L---PGEAAATAG-GLINSGGNLGGFVAPlLIGY-----LVDATGSyTAAFLFLAAVALLAALLVLL 357
MFS_GLUT10_Class3 cd17436
Glucose transporter type 10 (GLUT10), a Class 3 GLUT, of the Major Facilitator Superfamily of ...
89-454 1.07e-03

Glucose transporter type 10 (GLUT10), a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 10 (GLUT10) is also called Solute carrier family 2, facilitated glucose transporter member 10 (SLC2A10). It is classified as a Class 3 GLUT and is a facilitative glucose transporter that exhibits a wide tissue distribution. It is expressed in pancreas, placenta, heart, lung, liver, brain, fat, muscle, and kidney. GLUT10 facilitates the transport of dehydroascorbic acid (DHA), the oxidized form of vitamin C, into mitochondria, and also increases cellular uptake of DHA, which in turn protects cells against oxidative stress. Loss-of-function mutations in SLC2A10 cause arterial tortuosity syndrome (ATS), an autosomal recessive connective tissue disorder characterized by twisting and lengthening of the major arteries, hypermobility of the joints, and laxity of skin. The GLUT10 subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340994 [Multi-domain]  Cd Length: 376  Bit Score: 41.33  E-value: 1.07e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   89 VSNAALVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALcaashgTTVPGMFWMLTVMRGLVGIGVGaeypTSTLSA 168
Cdd:cd17436  41 LVSALLIGALLASLIGGFLIDRHGRRTSILGSNLVLLAGSLI------LTLAGSFFWLVIGRAVVGFAIS----VSSMAC 110
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  169 NESANEYTTTKRGGILVMVTNLPLAFGgpfatiiFLIVYKICSGTKHLEAIWRTVFAIG----CFWPLSVFYFRWKTATT 244
Cdd:cd17436 111 CIYVSEMVTPHQRGLLVSLYEAGITVG-------ILISYALNYFFSNVLTGWRYMFGLAiipaAIQFASILLLPKKPEVL 183
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  245 EVYEKGRikrnipyflalkfywKRLLGTCGTWFMYDFVTFPNGIF-SSTIISSVIKDQNDLVKVAEWNLLLGVLAVLGVP 323
Cdd:cd17436 184 NIKDNMR---------------RRTLVGLGLVLFQQFTGQPNVLCyASTIFRSVGFQSNSSAVLASVGLGVVKVIATLLA 248
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  324 IGayLSDRIGRKYTLMFGFSGYIIFGLIIGcaydqlkkitpLFIIFYAFMNMLG--NAGPGDMLGVISSEASATAVRGVF 401
Cdd:cd17436 249 ML--FADRAGRRSLLIAGCSVMAVSVSGIG-----------LWITLLCLMAFVSafSIGFGPMTWLVLSEIYPADIRGRA 315
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|...
gi 6319941  402 YGLSAVTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGIIITYFFVPHS 454
Cdd:cd17436 316 FSFCNSFNWAANLLITLSFLDLIDVIGLSWTFLLYGVVGVAGVVFIYLFVPET 368
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
323-454 1.07e-03

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 41.44  E-value: 1.07e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  323 PIGAYLSDRIGRKYTLMFG----FSGYIIFGLIigcaydqlkKITPLFIIFYAFMNM---LGNAGPGDMLGVISSEASAT 395
Cdd:cd17329  53 LIGGRLADRFGRKPVMLAGlllrALGFALLGFA---------HSPWLFAIALVLTGFgggLFEPASEAMIADVTTPENRT 123
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6319941  396 AVRGVFY---GLSAVTGK-IGSVVGvecfqpirdNLGARWTFIIAAICGLIGIIITYFFVPHS 454
Cdd:cd17329 124 RAFSLLYwaiNLGVAIGPlLGGLLL---------LYSFRLLFLAAAVLFLLAALVLLFLLPET 177
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
323-452 1.78e-03

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 40.66  E-value: 1.78e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  323 PIGAYLSDRIGRKY----------TLMFGFSGYIIF--------GLIIGCAydqlkkIT-PLFIIFYAFMNMLGNAGPGD 383
Cdd:COG2211  64 PLIGALSDRTRTRWgrrrpwiligAIPLALSFVLLFtapdlsptGKLIYAL------VTyLLLGLAYTLVNIPYSALGAE 137
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 6319941  384 MLGVISSEASATAVRGVFyglsavtGKIGSVVGVECFQPIRDNLGA------RWTFIIAAICGLIGIIITYFFVP 452
Cdd:COG2211 138 LTPDYEERTRLSSWRFAF-------AGLGGLLASVLPPPLVAAFGGdaalgyRLTALIFAVLGLLAFLLTFFGTK 205
MFS_GLUT10_12_Class3_like cd17362
Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the ...
80-452 2.26e-03

Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 10, GLUT12, plant polyol transporters (PLTs), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340920 [Multi-domain]  Cd Length: 389  Bit Score: 40.41  E-value: 2.26e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941   80 NYSSKVSTRVSNAALVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAAShgttvPGMFWMLtVMRGLVGIGVGa 159
Cdd:cd17362  35 NLSSLQSGLVVSGSLLGALLGSLVAGALIDRLGRRKELILAALLYLVGSLVTGLA-----PSYPVLL-VGRLIYGVGIG- 107
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  160 eypTSTLSANESANEYTTTKRGGILVMVTNLplafggpFATIIFLIVYKICSGTKHLEAIWRTVFAIGCfwPLSV----- 234
Cdd:cd17362 108 ---LAMHAAPVYIAETSPSHIRGLLVSLKEL-------FIVLGILLGYVSGYAFADVVGGWRYMYGLAA--PPALllgig 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  235 FYF-----RWKTAttevyekgrikrnipyflalkfYWKRLLGTCGTWFMYDFVTFPNGIF-SSTIISSV-IKDQNDLVKV 307
Cdd:cd17362 176 MWFlppspRWQGN----------------------YRKPLIIGLGLVLFQQITGQPSVLYyAATIFKSAgFSAASDATLV 233
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  308 AewnLLLGVLAVLGVPIGAYLSDRIGRKYTLMFGFSG----------YIIFGLIIGCAYDQLKKI-TPLFIIFYAFmnml 376
Cdd:cd17362 234 S---VGLGVFKLLMTIVAVLLVDKLGRRPLLLGGVSGmvvslfllaaYNLFVQMGPAGLAWLSLVaLLLYVGAYQI---- 306
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 6319941  377 gnaGPGDMLGVISSEASATAVRGVFYGLSAVTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGIIITYFFVP 452
Cdd:cd17362 307 ---SFGPISWLMVSEIFPLRVRGRAIALAVLVNFGSNALVSLAFLPLQELIGLPGTFLGFGVIGVLALLFIYFTVP 379
MFS_spinster_like cd17328
Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; ...
93-156 2.38e-03

Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340886 [Multi-domain]  Cd Length: 405  Bit Score: 40.30  E-value: 2.38e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 6319941   93 ALVGIIFGQFfmgiaADYYSRKSCILVATAILVIGSALCAAShgttvpGMFWMLTVMRGLVGIG 156
Cdd:cd17328  48 MVLSPIFGYL-----GDRYNRKWILAVGILIWSAATLLSSFA------PNFWQLLLFRALVGIG 100
MFS_GLUT_Class1 cd17431
Class 1 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called ...
327-452 2.48e-03

Class 1 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-4 are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT1, also called solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1), displays broad substrate specificity and can transport a wide range of pentoses and hexoses including glucose, galactose, mannose, and glucosamine. It is found in the brain, erythrocytes, and in many fetal tissues. GLUT2 (or SLC2A2) is found in the liver, islet of Langerhans, intestine, and kidney, and is the isoform that likely mediates the bidirectional transfer of glucose across the plasma membrane of hepatocytes and is responsible for uptake of glucose by beta cells. GLUT3 (or SLC2A3) is found in the brain and can mediates the uptake of glucose, 2-deoxyglucose, galactose, mannose, xylose and fucose, and dehydroascorbate. GLUT4 (or SLC2A4) is an insulin-regulated facilitative glucose transporter found in adipose tissues, and in skeletal and cardiac muscle. GLUT14 (or SLC2A14) is an orphan transporter expressed mainly in the testis. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340989 [Multi-domain]  Cd Length: 445  Bit Score: 40.40  E-value: 2.48e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  327 YLSDRIGRKYTLMFGFSGYIIFGLIIGCAYDQLKKI----------TPLFIIFYAFmnmlgnaGPGDMLGVISSEASATA 396
Cdd:cd17431 313 FLVERAGRRTLHLIGLGGMAICAILMTIALLLLEGYpwmsyvsivaIFGFVAFFEI-------GPGPIPWFIVAELFSQG 385
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 6319941  397 VRGVFYGLSAVTGKIGS-VVGVeCFQPIRDNLGArWTFIIAAICGLIGIIITYFFVP 452
Cdd:cd17431 386 PRPAAMAVAGFSNWTSNfIVGM-CFQYIANLCGP-YVFIIFTVFLLTFFIFTYFKVP 440
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
103-164 2.85e-03

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 39.85  E-value: 2.85e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6319941  103 FMGIAADYYSRKSCILVATAILVIGSALCAASHGttvpgmFWMLTVMRGLVGIGVGAEYPTS 164
Cdd:cd17321  50 LAGRLGDRFGRKRVFLIGLALFGLASLLCALAPS------LAFLIAARALQGIGAAAIMPAS 105
MFS_YajR_like cd17472
Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux ...
90-156 3.93e-03

Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli inner membrane transport protein YajR and some uncharacterized multidrug-efflux transporters. YajR is a putative proton-driven major facilitator superfamily (MFS) transporter found in many gram-negative bacteria. Unlike most MFS transporters, YajR contains a C-terminal, cytosolic YAM domain, which may play an essential role for the proper functioning of the transporter. YajR-like transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341025 [Multi-domain]  Cd Length: 371  Bit Score: 39.51  E-value: 3.93e-03
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 6319941   90 SNAALVGIIFG---------QFFMGIAADYYSRKSCILVATAILVIGSALCAASHGttvpgmFWMLTVMRGLVGIG 156
Cdd:cd17472  29 ATPTLIGLALGiygltqaifQIPFGLLSDRIGRKPVILFGLLLFIAGSLLAAYATS------IYGLILGRALQGSG 98
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
323-452 4.68e-03

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 39.48  E-value: 4.68e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  323 PIGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAydqlkkitPLFIIFYAFMNMLGNAGPGDMLGVIS--SEASATAVRGV 400
Cdd:COG2223  58 IPLGFLVDRFGPRRVLLIGLLLLGIGLLLLALA--------VSYWLLLLLGLLLGIGGGGSFAVGIAlvSKWFPPDRRGL 129
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 6319941  401 FYGLSAVTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGIIITYFFVP 452
Cdd:COG2223 130 ALGLAAGGGNLGAAVAAFLAPLLIAAFGWRNAFLILGILLLVVAVLAWLFLR 181
BtlA COG2270
MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction ...
324-452 5.51e-03

MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction only];


Pssm-ID: 441871 [Multi-domain]  Cd Length: 424  Bit Score: 39.37  E-value: 5.51e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  324 IGAyLSDRIGRKYTLMFGFSgyiiFGLIIGCAY------DQLKKITPLFI---IFYAFMNMLGNAgpgdMLGVISSEASA 394
Cdd:COG2270  72 LGA-IADRSGRKKPFLAFFT----LLGVLATAAlffvapGGLWLGLLLFVlanIGFEGSLVFYNA----FLPDIATPEEI 142
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6319941  395 TAVRGVFYGLsavtGKIGSVV----------GVECFQPIRDNLGARWTFIIAAICGLIGIIITYFFVP 452
Cdd:COG2270 143 GRVSGLGWAL----GYLGGVLlllinlalflKPEAFGLPDAGEAVRISFLLTALWWLLFALPLFLFLP 206
MFS_GLUT6_Class3 cd17434
Glucose transporter type 6, a Class 3 GLUT, of the Major Facilitator Superfamily of ...
324-454 5.61e-03

Glucose transporter type 6, a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 6 (GLUT6) is also called Solute carrier family 2, facilitated glucose transporter member 6 (SLC2A6). It is classified as a Class 3 GLUT protein, and is a facilitative glucose transporter that binds cytochalasin B with low affinity. It is found in the brain, spleen, and leucocytes. GLUT6 may function in oxalate secretion. SLC2A6 has been identified as an oxalate nephrolithiasis gene in mice; its deletion causes spontaneous calcium oxalate nephrolithiasis in the setting of hyperoxalaemia, hyperoxaluria, and nephrocalcinosis. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340992 [Multi-domain]  Cd Length: 417  Bit Score: 39.05  E-value: 5.61e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  324 IGAYLSDRIGRKyTLMFgFSGYIIF------GLIIGCAydqlkkiTPLFIIFYAFmnmlgnaGPGDMLGVISSEASATAV 397
Cdd:cd17434 290 IAASLMDKAGRK-ILLF-TSAFLMFaanlsmGLIPLIA-------AMLFIMGYAM-------GWGPITWLLMSEILPLKA 353
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 6319941  398 RGVFYGLSAVTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGIIITYFFVPHS 454
Cdd:cd17434 354 RGVASGLCVVVSWITAFVLTQLFLPVVVTFGLQVPFLFFAAVCAVSIIFTACCVPET 410
MFS_FEN2_like cd17327
Pantothenate transporter FEN2 and similar transporters of the Major Facilitator Superfamily; ...
115-422 7.26e-03

Pantothenate transporter FEN2 and similar transporters of the Major Facilitator Superfamily; This family is composed of Saccharomyces cerevisiae pantothenate transporter FEN2 (or fenpropimorph resistance protein 2) and similar proteins from fungi and bacteria including fungal vitamin H transporter, allantoate permease, and high-affinity nicotinic acid transporter, as well as Pseudomonas putida phthalate transporter and nicotinate degradation protein T (nicT). These proteins are involved in the uptake into the cell of specific substrates such as pathothenate, biotin, allantoate, and nicotinic acid, among others. The FEN2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340885 [Multi-domain]  Cd Length: 406  Bit Score: 38.77  E-value: 7.26e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  115 SCILVATAILVIGSALCaashgTTVPGmfwmLTVMRGLVGIGVGAEYPTSTLsanesaneYTTT--------KRGGILVM 186
Cdd:cd17327  75 SVFIVLWGLLTLLTAAV-----KNFGG----LIALRFFLGLFESGVFPGFIL--------YLGMwykreeqaKRIAFFYA 137
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  187 VTNLPLAFGGPFATIIFLI--VYKIcsgtkhleAIWRTVFAI-GC---FWPLSVFYF--------RWKTATTEVYEKGRI 252
Cdd:cd17327 138 AAGLGSIFGGLLAYGVFKIlgVGGL--------AGWRWLFIIeGLitiIIGLVIFFWlpdnpskaWFLTEEEKELAVERL 209
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  253 KRNIPYFLALKFYWKRLLGTCGTWFMYDFVTF------PNGI---FSSTIISSvikDQNDLVKVAEWNLLLGVLAVLGVP 323
Cdd:cd17327 210 RANQTGKGDQKFKWKQIKEAFKDPRTWLLFLFffcsqiTNNGisnFLPLILKS---LGFYSLQTNLLSVPIGALGAVSLL 286
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319941  324 IGAYLSDRIGRKYTLMFGFSGYIIFGLIIGCAYDQLKKItpLFIIFYAFMNmlGNAGPGDMLGVISSEASATAVRGVFYG 403
Cdd:cd17327 287 IAALLSDRFKKRGLFAIFACVLALVGSIILLAAPNPPGA--YFAAYILGGG--SYAGFPILLSWISSNCAGYTKRATVLA 362
                       330
                ....*....|....*....
gi 6319941  404 LSAVTGKIGSVVGVECFQP 422
Cdd:cd17327 363 IMLIFYNVGNIVAPQIFRA 381
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH