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uncharacterized protein YCR101C [Saccharomyces cerevisiae S288C]
List of domain hits
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Name | Accession | Description | Interval | E-value | |||
VPS10 super family | cl33391 | VPS10 domain; |
36-166 | 1.08e-17 | |||
VPS10 domain; The actual alignment was detected with superfamily member smart00602: Pssm-ID: 214740 [Multi-domain] Cd Length: 612 Bit Score: 79.76 E-value: 1.08e-17
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Name | Accession | Description | Interval | E-value | |||
VPS10 | smart00602 | VPS10 domain; |
36-166 | 1.08e-17 | |||
VPS10 domain; Pssm-ID: 214740 [Multi-domain] Cd Length: 612 Bit Score: 79.76 E-value: 1.08e-17
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Sortilin-Vps10 | pfam15902 | Sortilin, neurotensin receptor 3,; Sortilin, also known in mammals as neurotensin receptor-3, ... |
55-144 | 4.23e-14 | |||
Sortilin, neurotensin receptor 3,; Sortilin, also known in mammals as neurotensin receptor-3, is the archetypical member of a Vps10-domain (Vps10-D) that binds neurotrophic factors and neuropeptides. This domain constitutes the entire luminal part of Sortilin and is activated in the trans-Golgi network by enzymatic propeptide cleavage. The structure of the domain has been determined as a ten-bladed propeller, with up to 9 BNR or beta-hairpin turns in it. The mature receptor binds various ligands, including its own propeptide (Sort-pro), neurotensin, the pro-forms of nerve growth factor-beta (NGF)6 and brain-derived neurotrophic factor (BDNF)7, lipoprotein lipase (LpL), apo lipoprotein AV14 and the receptor-associated protein (RAP)1. Pssm-ID: 464929 [Multi-domain] Cd Length: 444 Bit Score: 69.15 E-value: 4.23e-14
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COG4447 | COG4447 | Uncharacterized conserved protein related to plant photosystem II stability/assembly factor ... |
36-124 | 6.09e-06 | |||
Uncharacterized conserved protein related to plant photosystem II stability/assembly factor [General function prediction only]; Pssm-ID: 443546 [Multi-domain] Cd Length: 156 Bit Score: 44.22 E-value: 6.09e-06
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Name | Accession | Description | Interval | E-value | |||
VPS10 | smart00602 | VPS10 domain; |
36-166 | 1.08e-17 | |||
VPS10 domain; Pssm-ID: 214740 [Multi-domain] Cd Length: 612 Bit Score: 79.76 E-value: 1.08e-17
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Sortilin-Vps10 | pfam15902 | Sortilin, neurotensin receptor 3,; Sortilin, also known in mammals as neurotensin receptor-3, ... |
55-144 | 4.23e-14 | |||
Sortilin, neurotensin receptor 3,; Sortilin, also known in mammals as neurotensin receptor-3, is the archetypical member of a Vps10-domain (Vps10-D) that binds neurotrophic factors and neuropeptides. This domain constitutes the entire luminal part of Sortilin and is activated in the trans-Golgi network by enzymatic propeptide cleavage. The structure of the domain has been determined as a ten-bladed propeller, with up to 9 BNR or beta-hairpin turns in it. The mature receptor binds various ligands, including its own propeptide (Sort-pro), neurotensin, the pro-forms of nerve growth factor-beta (NGF)6 and brain-derived neurotrophic factor (BDNF)7, lipoprotein lipase (LpL), apo lipoprotein AV14 and the receptor-associated protein (RAP)1. Pssm-ID: 464929 [Multi-domain] Cd Length: 444 Bit Score: 69.15 E-value: 4.23e-14
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COG4447 | COG4447 | Uncharacterized conserved protein related to plant photosystem II stability/assembly factor ... |
36-124 | 6.09e-06 | |||
Uncharacterized conserved protein related to plant photosystem II stability/assembly factor [General function prediction only]; Pssm-ID: 443546 [Multi-domain] Cd Length: 156 Bit Score: 44.22 E-value: 6.09e-06
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COG4447 | COG4447 | Uncharacterized conserved protein related to plant photosystem II stability/assembly factor ... |
44-125 | 7.05e-03 | |||
Uncharacterized conserved protein related to plant photosystem II stability/assembly factor [General function prediction only]; Pssm-ID: 443546 [Multi-domain] Cd Length: 156 Bit Score: 35.36 E-value: 7.05e-03
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Blast search parameters | ||||
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