protocadherin beta-4 precursor [Homo sapiens]
protocadherin( domain architecture ID 11175748)
protocadherin may have tightly regulated functions in the development, regionalization, and functional differentiation of the central nervous system
List of domain hits
Name | Accession | Description | Interval | E-value | |||
Cadherin_2 | pfam08266 | Cadherin-like; This cadherin domain is usually the most N-terminal copy of the domain. |
29-110 | 4.67e-45 | |||
Cadherin-like; This cadherin domain is usually the most N-terminal copy of the domain. : Pssm-ID: 462413 Cd Length: 83 Bit Score: 156.15 E-value: 4.67e-45
|
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Cadherin_C_2 | pfam16492 | Cadherin cytoplasmic C-terminal; Cadherin_C_2 is the cytoplasmic C-terminal domain of some ... |
684-767 | 6.97e-34 | |||
Cadherin cytoplasmic C-terminal; Cadherin_C_2 is the cytoplasmic C-terminal domain of some proto-cadherins. It is this region of the cadherins that allows cell-adhesion and the essential feature of metazoan multicellularity. Cadherins are cell-surface receptors that function in cell adhesion, cell polarity, and tissue morphogenesis. : Pssm-ID: 465139 Cd Length: 84 Bit Score: 124.56 E-value: 6.97e-34
|
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Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
245-342 | 1.25e-29 | |||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. : Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 112.79 E-value: 1.25e-29
|
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Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
454-556 | 1.28e-29 | |||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. : Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 112.79 E-value: 1.28e-29
|
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Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
139-237 | 6.18e-25 | |||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. : Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 99.31 E-value: 6.18e-25
|
|||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
575-663 | 4.16e-22 | |||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. : Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 91.61 E-value: 4.16e-22
|
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Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
354-446 | 5.01e-21 | |||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. : Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 88.52 E-value: 5.01e-21
|
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Name | Accession | Description | Interval | E-value | |||
Cadherin_2 | pfam08266 | Cadherin-like; This cadherin domain is usually the most N-terminal copy of the domain. |
29-110 | 4.67e-45 | |||
Cadherin-like; This cadherin domain is usually the most N-terminal copy of the domain. Pssm-ID: 462413 Cd Length: 83 Bit Score: 156.15 E-value: 4.67e-45
|
|||||||
Cadherin_C_2 | pfam16492 | Cadherin cytoplasmic C-terminal; Cadherin_C_2 is the cytoplasmic C-terminal domain of some ... |
684-767 | 6.97e-34 | |||
Cadherin cytoplasmic C-terminal; Cadherin_C_2 is the cytoplasmic C-terminal domain of some proto-cadherins. It is this region of the cadherins that allows cell-adhesion and the essential feature of metazoan multicellularity. Cadherins are cell-surface receptors that function in cell adhesion, cell polarity, and tissue morphogenesis. Pssm-ID: 465139 Cd Length: 84 Bit Score: 124.56 E-value: 6.97e-34
|
|||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
245-342 | 1.25e-29 | |||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 112.79 E-value: 1.25e-29
|
|||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
454-556 | 1.28e-29 | |||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 112.79 E-value: 1.28e-29
|
|||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
139-237 | 6.18e-25 | |||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 99.31 E-value: 6.18e-25
|
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CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
473-558 | 4.99e-23 | |||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 93.57 E-value: 4.99e-23
|
|||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
265-344 | 4.08e-22 | |||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 90.87 E-value: 4.08e-22
|
|||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
575-663 | 4.16e-22 | |||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 91.61 E-value: 4.16e-22
|
|||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
156-239 | 3.03e-21 | |||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 88.56 E-value: 3.03e-21
|
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Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
354-446 | 5.01e-21 | |||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 88.52 E-value: 5.01e-21
|
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Cadherin | pfam00028 | Cadherin domain; |
455-551 | 1.42e-18 | |||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 81.19 E-value: 1.42e-18
|
|||||||
Cadherin | pfam00028 | Cadherin domain; |
246-336 | 2.08e-17 | |||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 77.73 E-value: 2.08e-17
|
|||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
370-448 | 3.41e-17 | |||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 77.00 E-value: 3.41e-17
|
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CA_like | cd00031 | Cadherin repeat-like domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
30-128 | 1.06e-15 | |||
Cadherin repeat-like domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. This family also includes the cadherin-like repeats of extracellular alpha-dystroglycan. Pssm-ID: 206635 Cd Length: 98 Bit Score: 73.15 E-value: 1.06e-15
|
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CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
589-663 | 2.10e-15 | |||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 71.61 E-value: 2.10e-15
|
|||||||
Cadherin | pfam00028 | Cadherin domain; |
141-231 | 6.50e-15 | |||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 70.79 E-value: 6.50e-15
|
|||||||
Cadherin | pfam00028 | Cadherin domain; |
575-661 | 6.45e-13 | |||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 65.01 E-value: 6.45e-13
|
|||||||
Cadherin | pfam00028 | Cadherin domain; |
354-440 | 4.84e-11 | |||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 59.62 E-value: 4.84e-11
|
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Name | Accession | Description | Interval | E-value | |||
Cadherin_2 | pfam08266 | Cadherin-like; This cadherin domain is usually the most N-terminal copy of the domain. |
29-110 | 4.67e-45 | |||
Cadherin-like; This cadherin domain is usually the most N-terminal copy of the domain. Pssm-ID: 462413 Cd Length: 83 Bit Score: 156.15 E-value: 4.67e-45
|
|||||||
Cadherin_C_2 | pfam16492 | Cadherin cytoplasmic C-terminal; Cadherin_C_2 is the cytoplasmic C-terminal domain of some ... |
684-767 | 6.97e-34 | |||
Cadherin cytoplasmic C-terminal; Cadherin_C_2 is the cytoplasmic C-terminal domain of some proto-cadherins. It is this region of the cadherins that allows cell-adhesion and the essential feature of metazoan multicellularity. Cadherins are cell-surface receptors that function in cell adhesion, cell polarity, and tissue morphogenesis. Pssm-ID: 465139 Cd Length: 84 Bit Score: 124.56 E-value: 6.97e-34
|
|||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
245-342 | 1.25e-29 | |||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 112.79 E-value: 1.25e-29
|
|||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
454-556 | 1.28e-29 | |||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 112.79 E-value: 1.28e-29
|
|||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
139-237 | 6.18e-25 | |||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 99.31 E-value: 6.18e-25
|
|||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
473-558 | 4.99e-23 | |||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 93.57 E-value: 4.99e-23
|
|||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
265-344 | 4.08e-22 | |||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 90.87 E-value: 4.08e-22
|
|||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
575-663 | 4.16e-22 | |||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 91.61 E-value: 4.16e-22
|
|||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
156-239 | 3.03e-21 | |||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 88.56 E-value: 3.03e-21
|
|||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
354-446 | 5.01e-21 | |||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 88.52 E-value: 5.01e-21
|
|||||||
Cadherin | pfam00028 | Cadherin domain; |
455-551 | 1.42e-18 | |||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 81.19 E-value: 1.42e-18
|
|||||||
Cadherin | pfam00028 | Cadherin domain; |
246-336 | 2.08e-17 | |||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 77.73 E-value: 2.08e-17
|
|||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
370-448 | 3.41e-17 | |||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 77.00 E-value: 3.41e-17
|
|||||||
CA_like | cd00031 | Cadherin repeat-like domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
30-128 | 1.06e-15 | |||
Cadherin repeat-like domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. This family also includes the cadherin-like repeats of extracellular alpha-dystroglycan. Pssm-ID: 206635 Cd Length: 98 Bit Score: 73.15 E-value: 1.06e-15
|
|||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
589-663 | 2.10e-15 | |||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 71.61 E-value: 2.10e-15
|
|||||||
Cadherin | pfam00028 | Cadherin domain; |
141-231 | 6.50e-15 | |||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 70.79 E-value: 6.50e-15
|
|||||||
Cadherin | pfam00028 | Cadherin domain; |
575-661 | 6.45e-13 | |||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 65.01 E-value: 6.45e-13
|
|||||||
Cadherin | pfam00028 | Cadherin domain; |
354-440 | 4.84e-11 | |||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 59.62 E-value: 4.84e-11
|
|||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
29-128 | 4.75e-07 | |||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 48.46 E-value: 4.75e-07
|
|||||||
CA_like | cd00031 | Cadherin repeat-like domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
352-446 | 2.90e-03 | |||
Cadherin repeat-like domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. This family also includes the cadherin-like repeats of extracellular alpha-dystroglycan. Pssm-ID: 206635 Cd Length: 98 Bit Score: 37.71 E-value: 2.90e-03
|
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Blast search parameters | ||||
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