|
Name |
Accession |
Description |
Interval |
E-value |
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
368-1152 |
1.98e-34 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 143.39 E-value: 1.98e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 368 VEELQRKLDEEVKKRQKLEPSQVGLERQLEEKTEECSRLQELLERRKGEAQQSNKELQNMKRLLDQGEDLRHGLETQVME 447
Cdd:pfam01576 189 ISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRE 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 448 LQNKLKHVQGPEPAKEVL----------LKDLLETRELLEEVLEGKQRVEEQLRL-RERELTALKGALKEEVASRDQEVE 516
Cdd:pfam01576 269 LEAQISELQEDLESERAArnkaekqrrdLGEELEALKTELEDTLDTTAAQQELRSkREQEVTELKKALEEETRSHEAQLQ 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 517 HVRQQY-------QRDTEQLRRSMQDATQDHAVLEAERQKMSALVRGLQ----------------------------REL 561
Cdd:pfam01576 349 EMRQKHtqaleelTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQqakqdsehkrkklegqlqelqarlseseRQR 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 562 EETSEETGHWQSMFQKNKEDLRATKQELLQLRMEKEEMEEELGEKIEVLQRELEQARASAGDTRQVEVLKKELLRTQEEL 641
Cdd:pfam01576 429 AELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEE 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 642 KELQ--AERQSQEVAGRHRD--RELEKQLAVLRVEADRGRELEEQNLQLQKTLQQLRQDCEEASKAKMVAEAE---ATVL 714
Cdd:pfam01576 509 EEAKrnVERQLSTLQAQLSDmkKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQElddLLVD 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 715 GQRRAAVETTLRETQEENDEF-------------RRRILGLEQQLKETRGLVDGGEAVEAR-LRDKLQRLEAEKQQLEEA 780
Cdd:pfam01576 589 LDHQRQLVSNLEKKQKKFDQMlaeekaisaryaeERDRAEAEAREKETRALSLARALEEALeAKEELERTNKQLRAEMED 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 781 LNASQEEEG----SLAAAKRALEARLEEAQRGLARLGQEQQTLNRA-------LEEEGKQREVLRRGKAEL-EEQKRLLD 848
Cdd:pfam01576 669 LVSSKDDVGknvhELERSKRALEQQVEEMKTQLEELEDELQATEDAklrlevnMQALKAQFERDLQARDEQgEEKRRQLV 748
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 849 RTVDRLNKELE-------------KIGEDSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGG-------- 907
Cdd:pfam01576 749 KQVRELEAELEderkqraqavaakKKLELDLKELEAQIDAANKGREEAVKQLKKLQAQMKDLQRELEEARASrdeilaqs 828
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 908 ------LSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGleqEAENKKRSQDDRARqlkgLEEKVSRLETELDEE 981
Cdd:pfam01576 829 kesekkLKNLEAELLQLQEDLAASERARRQAQQERDELADEIAS---GASGKSALQDEKRR----LEARIAQLEEELEEE 901
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 982 KNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGF--QKPSASLSQLESQNQLLQE 1059
Cdd:pfam01576 902 QSNTELLNDRLRKSTLQVEQLTTELAAERSTSQKSESARQQLERQNKELKAKLQEMEGTvkSKFKSSIAALEAKIAQLEE 981
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1060 RLQAEEREKTVLQSTNRKLERKVKELSIQIEDERQH---VNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQREVE 1136
Cdd:pfam01576 982 QLEQESRERQAANKLVRRTEKKLKEVLLQVEDERRHadqYKDQAEKGNSRMKQLKRQLEEAEEEASRANAARRKLQRELD 1061
|
890
....*....|....*.
gi 16262452 1137 EQHEVNEQLQARIKSL 1152
Cdd:pfam01576 1062 DATESNESMNREVSTL 1077
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
575-1124 |
4.53e-25 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 113.11 E-value: 4.53e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 575 FQKNKEDLRATKQELLQLR-MEKEEMEEELGEKIEVLQRELEQARAS-AGDTRQVEVLKKELLRTQEELKELQAE----- 647
Cdd:COG1196 215 YRELKEELKELEAELLLLKlRELEAELEELEAELEELEAELEELEAElAELEAELEELRLELEELELELEEAQAEeyell 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 648 -RQSQEVAGRHRDRELEKQLAVLRVEAD-RGRELEEQNLQLQKTLQQLRQDCEEASKAKMVAEAEATVLGQRRAAVETTL 725
Cdd:COG1196 295 aELARLEQDIARLEERRRELEERLEELEeELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAEL 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 726 RETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQRLEAEKQQLEEALNASQEEEGSLAAAKRALEARLEEA 805
Cdd:COG1196 375 AEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAEL 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 806 QRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLN------KELEKIGEDSKQALQQLQAQLEDY 879
Cdd:COG1196 455 EEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEgflegvKAALLLAGLRGLAGAVAVLIGVEA 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 880 KEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDD 959
Cdd:COG1196 535 AYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADAR 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 960 RARQLKGLEEKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLEcdKISLERQNKDLKTRLASSEG 1039
Cdd:COG1196 615 YYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLA--ALLEAEAELEELAERLAEEE 692
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1040 FQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERKVKELSIQIEDERQHVNDQKDQLS--LRVKALKRQVDEA 1117
Cdd:COG1196 693 LELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPepPDLEELERELERL 772
|
....*..
gi 16262452 1118 EEEIERL 1124
Cdd:COG1196 773 EREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
610-1155 |
4.88e-23 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 106.56 E-value: 4.88e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 610 LQRELEQARASAGdTRQVEVLKKELLRTQEELKELQAERQSQEVAGRHRDRELEKQLAVLRVEADRGRELEEQNLQLQKT 689
Cdd:COG1196 218 LKEELKELEAELL-LLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 690 LQQLRQDCEEASKAKMVAEAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQR 769
Cdd:COG1196 297 LARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAE 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 770 LEAEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDR 849
Cdd:COG1196 377 AEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEE 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 850 TVDRLNKELEKIGEDSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAER 929
Cdd:COG1196 457 EEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAY 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 930 DTArLDKELLAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVsRLETELDEEKNTVELLTDRVNRGRDQVDQLR------ 1003
Cdd:COG1196 537 EAA-LEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFL-PLDKIRARAALAAALARGAIGAAVDLVASDLreadar 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1004 ------TELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRK 1077
Cdd:COG1196 615 yyvlgdTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELE 694
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1078 LERKVKELSIQiEDERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQREVEEQHEVN----EQLQARIKSLE 1153
Cdd:COG1196 695 LEEALLAEEEE-ERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEppdlEELERELERLE 773
|
..
gi 16262452 1154 KD 1155
Cdd:COG1196 774 RE 775
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
367-1138 |
1.02e-21 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 102.45 E-value: 1.02e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 367 KVEELQRKLDE-----EVKKRQKLEPSQVGLERQLEEKTEECSRLQELLERRKGEAQQSNKELQNM-KRLLDQGEDLRHG 440
Cdd:TIGR02169 212 RYQALLKEKREyegyeLLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELnKKIKDLGEEEQLR 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 441 LETQVMELQNKLKHVQGPEPAKEVLLKDLLETRELLEEVLEGKQRVEEQLRLRERELTALKGALKEEVASRDQEVEHVRQ 520
Cdd:TIGR02169 292 VKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRA 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 521 QYQRDTEQLRRSMQDATQDHAVLEAERQKMSALVRGLQRELEETSEETGHWQSMfqknKEDLRATKQELLQLrmekEEME 600
Cdd:TIGR02169 372 ELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADL----NAAIAGIEAKINEL----EEEK 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 601 EELGEKIEVLQRELEQARASAGDTR-QVEVLKKELLRTQEELKELQAERQSQEVAGRHRDRELEKQLAVLRVEADRGREL 679
Cdd:TIGR02169 444 EDKALEIKKQEWKLEQLAADLSKYEqELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGV 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 680 EEQNLQLQKTLQQLRQDCEEASKAKM---------VAEAEATVLGQRRA------------------------------- 719
Cdd:TIGR02169 524 HGTVAQLGSVGERYATAIEVAAGNRLnnvvveddaVAKEAIELLKRRKAgratflplnkmrderrdlsilsedgvigfav 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 720 -----------AVETTLRETQ-EENDEFRRRILG------LEQQLKETRGLVDGG-------EAVEARLRDKLQRLEAEK 774
Cdd:TIGR02169 604 dlvefdpkyepAFKYVFGDTLvVEDIEAARRLMGkyrmvtLEGELFEKSGAMTGGsraprggILFSRSEPAELQRLRERL 683
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 775 QQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRL 854
Cdd:TIGR02169 684 EGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKEL 763
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 855 NKELEKIGEDskqalqqlqaqledyKEKARREVADAqrQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARL 934
Cdd:TIGR02169 764 EARIEELEED---------------LHKLEEALNDL--EARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTL 826
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 935 DKELLAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQ 1014
Cdd:TIGR02169 827 EKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIE 906
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1015 DLECDKISLERQNKDLKTRLASSEGfqkpsaSLSQLESQNQLLQERLQAEEREKTVLQSTNRKLE--RKVKELSIQIEDE 1092
Cdd:TIGR02169 907 ELEAQIEKKRKRLSELKAKLEALEE------ELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEeiRALEPVNMLAIQE 980
|
810 820 830 840
....*....|....*....|....*....|....*....|....*.
gi 16262452 1093 RQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQREVEEQ 1138
Cdd:TIGR02169 981 YEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREVFMEAFEA 1026
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
364-1152 |
2.09e-20 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 98.21 E-value: 2.09e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 364 LTRKVEELQRKLDEEVKKRQKLEPSQVGLERQLEEKTEECSRLQELLERRKGEAQQSNKELQNMKRLLdqgedlrHGLET 443
Cdd:TIGR02168 230 LVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEI-------SRLEQ 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 444 QVMELQNKLKHVQGPEPAKEVLLKDLLETRELLEEVlegKQRVEEQLRLRERELTALKGALKEEVASRdQEVEHVRQQYQ 523
Cdd:TIGR02168 303 QKQILRERLANLERQLEELEAQLEELESKLDELAEE---LAELEEKLEELKEELESLEAELEELEAEL-EELESRLEELE 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 524 RDTEQLRRSMQDATQDHAVLEAERQKMSALVRGLQRELEETSEET-GHWQSMFQKNKEDLRATKQELLQLRMEKEEMEEE 602
Cdd:TIGR02168 379 EQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIeELLKKLEEAELKELQAELEELEEELEELQEELER 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 603 LGEKIEVLQRELEQARASAGDTRQVEVLKKELLRTQEELKELQAERQSQEVAGRHRDRELEKQLAVL--RVEADRGRELE 680
Cdd:TIGR02168 459 LEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLseLISVDEGYEAA 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 681 EQNLQLQKTLQQLRQDCEEASKA----KMVAEAEATVL---GQRRAAVETTLRETQEENDEFRRRILGLEQQLKETRGLV 753
Cdd:TIGR02168 539 IEAALGGRLQAVVVENLNAAKKAiaflKQNELGRVTFLpldSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKAL 618
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 754 D---GGEAVEARLRDKLQRL-------------------------------------EAEKQQLEEALNASQEEEGSLAA 793
Cdd:TIGR02168 619 SyllGGVLVVDDLDNALELAkklrpgyrivtldgdlvrpggvitggsaktnssilerRREIEELEEKIEELEEKIAELEK 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 794 AKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNKELEKIgEDSKQALQQLQ 873
Cdd:TIGR02168 699 ALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEEL-EERLEEAEEEL 777
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 874 AQLEDYKEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAErdtarldKELLAQRLQGLEQEAENK 953
Cdd:TIGR02168 778 AEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERR-------IAATERRLEDLEEQIEEL 850
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 954 KRSQDDRARQLKGLEEKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTR 1033
Cdd:TIGR02168 851 SEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELR 930
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1034 LASSEgfQKPSASLSQLESQNQLLQERLQAEEREKTVLQStnrKLERKVKELSIQIeDERQHVN----DQKDQLSLRVKA 1109
Cdd:TIGR02168 931 LEGLE--VRIDNLQERLSEEYSLTLEEAEALENKIEDDEE---EARRRLKRLENKI-KELGPVNlaaiEEYEELKERYDF 1004
|
810 820 830 840
....*....|....*....|....*....|....*....|....*...
gi 16262452 1110 LKRQVDEAEEEIERLDGLRKKAQREVEEQ-----HEVNEQLQARIKSL 1152
Cdd:TIGR02168 1005 LTAQKEDLTEAKETLEEAIEEIDREARERfkdtfDQVNENFQRVFPKL 1052
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
484-1012 |
2.32e-20 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 97.70 E-value: 2.32e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 484 QRVEEQLRLRERELTALKGALKEEVASRDQEVEHVRQQYQRDTEQL---RRSMQDATQDHAVLEAERQKMSALVRGLQRE 560
Cdd:COG1196 238 EAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELeeaQAEEYELLAELARLEQDIARLEERRRELEER 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 561 LEETSEETGHWQSMFQKNKEDLRATKQELLQLrmeKEEMEEELGEKIEVLQRELEQARASAGDTRQVEVLKKELLRTQEE 640
Cdd:COG1196 318 LEELEEELAELEEELEELEEELEELEEELEEA---EEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 641 LKELQAERQSQEVAGRHRDRELEKQLAVLRVEADRGRELEEQNLQLQKTLQQLRQDCEEASKAKMVAEAEATVLGQRRAA 720
Cdd:COG1196 395 AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAAL 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 721 VETTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLR--------DKLQRLEAEKQQLEEALNASQEEEGSLA 792
Cdd:COG1196 475 LEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGlrglagavAVLIGVEAAYEAALEAALAAALQNIVVE 554
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 793 AAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAEL---EEQKRLLDRTVDRLNKELEKIGEDSKQAL 869
Cdd:COG1196 555 DDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDlvaSDLREADARYYVLGDTLLGRTLVAARLEA 634
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 870 QQLQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGG-LSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQ 948
Cdd:COG1196 635 ALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAaLLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEE 714
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 16262452 949 EAENKKRSQDDRARQLKGLEEKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSA 1012
Cdd:COG1196 715 ERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
411-1153 |
3.08e-20 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 97.43 E-value: 3.08e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 411 ERRKGEAQQSNKELQNMKRLldqgEDLRHGLETQV-------------MELQNKLKHVQgpepaKEVLLKDLLETRELLE 477
Cdd:TIGR02168 172 ERRKETERKLERTRENLDRL----EDILNELERQLkslerqaekaeryKELKAELRELE-----LALLVLRLEELREELE 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 478 EVLEGKQRVEEQLRLRERELTALKGALkEEVASRDQEVEhvrqqyqRDTEQLRRSMQDATQDHAVLEAERQKMSALVRGL 557
Cdd:TIGR02168 243 ELQEELKEAEEELEELTAELQELEEKL-EELRLEVSELE-------EEIEELQKELYALANEISRLEQQKQILRERLANL 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 558 QRELEETSEETGHWQSMFQKNKEDLRATKQELLQLRMEKEEMEEELGEKIEVLQrelEQARASAGDTRQVEVLKKELLRT 637
Cdd:TIGR02168 315 ERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELE---ELESRLEELEEQLETLRSKVAQL 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 638 QEELKELQAERQSQEVAGRHRDRELEKQLAVLRVEADRGRELEEQNLQLQKTLQQLRQDCEEASKAKMVAEAEAtvLGQR 717
Cdd:TIGR02168 392 ELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEE--LREE 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 718 RAAVETTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEA----------RLRDKLQRLEAEKQQLEEAL--NASQ 785
Cdd:TIGR02168 470 LEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKnqsglsgilgVLSELISVDEGYEAAIEAALggRLQA 549
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 786 EEEGSLAAAKRALEArLEEAQRGLAR---LGQEQQTLNRALEEEGKQREVLRRGKAELEEQKR---------LLDRT--V 851
Cdd:TIGR02168 550 VVVENLNAAKKAIAF-LKQNELGRVTflpLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDpklrkalsyLLGGVlvV 628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 852 DRLNKELEKIGEdskqalqqlqaqledYKEKARREVADAQRQAKDWAS--EAEKTSGGLSRLQDEIQRLRQALQasQAER 929
Cdd:TIGR02168 629 DDLDNALELAKK---------------LRPGYRIVTLDGDLVRPGGVItgGSAKTNSSILERRREIEELEEKIE--ELEE 691
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 930 DTARLDKEL--LAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELM 1007
Cdd:TIGR02168 692 KIAELEKALaeLRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLE 771
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1008 QERSARQDLECDKISLERQNKDLKTRL-ASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERKVKELS 1086
Cdd:TIGR02168 772 EAEEELAEAEAEIEELEAQIEQLKEELkALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELS 851
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1087 IQIE-----------------DERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQREVEEQHEVNEQLQARI 1149
Cdd:TIGR02168 852 EDIEslaaeieeleelieeleSELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRL 931
|
....
gi 16262452 1150 KSLE 1153
Cdd:TIGR02168 932 EGLE 935
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
487-1172 |
5.71e-19 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 93.67 E-value: 5.71e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 487 EEQLRLRERELTALKGALKEEvasRDQEVEHVRQQYQRDTEQLRRSmQDATQDHAVLEAERQKMSALVRGLQ--RELEET 564
Cdd:PTZ00121 1094 EEAFGKAEEAKKTETGKAEEA---RKAEEAKKKAEDARKAEEARKA-EDARKAEEARKAEDAKRVEIARKAEdaRKAEEA 1169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 565 SEETGHWQSMFQKNKEDLRATKQellqLRMEKEEMEEELGEKIEVlQRELEQARaSAGDTRQVEVLKK--ELLRTQEELK 642
Cdd:PTZ00121 1170 RKAEDAKKAEAARKAEEVRKAEE----LRKAEDARKAEAARKAEE-ERKAEEAR-KAEDAKKAEAVKKaeEAKKDAEEAK 1243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 643 ELQAERQSQEVAGRHRDRELEKQLAVLRVEADRGRELEEQNLQLQKTLQqlrqdcEEASKAKMVAEAEATvlgQRRAAVE 722
Cdd:PTZ00121 1244 KAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKA------DEAKKAEEKKKADEA---KKKAEEA 1314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 723 TTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQRleAEKQQLEEALNASQEEEGSLAAAKRALEAR- 801
Cdd:PTZ00121 1315 KKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEA--AEEKAEAAEKKKEEAKKKADAAKKKAEEKKk 1392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 802 LEEAQRGLARLGQEQQTLNRALEEEGKQREVlrRGKAELEEQKRLLDRTVDRLNK--ELEKIGEDSKQALQQLQAQLEDY 879
Cdd:PTZ00121 1393 ADEAKKKAEEDKKKADELKKAAAAKKKADEA--KKKAEEKKKADEAKKKAEEAKKadEAKKKAEEAKKAEEAKKKAEEAK 1470
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 880 KEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAE--RDTARLDKELLAQRLQGLEQEAENKKRSQ 957
Cdd:PTZ00121 1471 KADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEeaKKADEAKKAEEAKKADEAKKAEEKKKADE 1550
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 958 DDRARQLKGLEEKVSRLETELDEEKNTVELltDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASS 1037
Cdd:PTZ00121 1551 LKKAEELKKAEEKKKAEEAKKAEEDKNMAL--RKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKA 1628
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1038 EGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLE----RKVKELSIQIEDERQhvndqkdqlslRVKALKRQ 1113
Cdd:PTZ00121 1629 EEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAeedkKKAEEAKKAEEDEKK-----------AAEALKKE 1697
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 16262452 1114 VDEAE--EEIERLDGLRKKAQREVEEQHEVNEQLQARIKSLEKDSWRKASRSAAESALKNE 1172
Cdd:PTZ00121 1698 AEEAKkaEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKK 1758
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
362-980 |
1.56e-18 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 91.92 E-value: 1.56e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 362 GELTRKVEELQR---------KLDEEVKKRQKLEpsqvgLERQLEEKTEECSRLQELLERRKGEAQQSNKELQNMKRLLD 432
Cdd:COG1196 196 GELERQLEPLERqaekaeryrELKEELKELEAEL-----LLLKLRELEAELEELEAELEELEAELEELEAELAELEAELE 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 433 QGEDLRHGLETQVMELQNKLkhvqgpepakevllkdlletrellEEVLEGKQRVEEQLRLRERELTALKGALKEEvasrD 512
Cdd:COG1196 271 ELRLELEELELELEEAQAEE------------------------YELLAELARLEQDIARLEERRRELEERLEEL----E 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 513 QEVEHVRQQYQRDTEQLRRsmqdATQDHAVLEAERQKMSALVRGLQRELEETSEETGHWQSMFQKNKEDLRATKQELLQL 592
Cdd:COG1196 323 EELAELEEELEELEEELEE----LEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAEL 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 593 RMEKEEMEEELGEKIEVLQRELEQARASAGDTRQVEVLKKELLRTQEELKELQAERQSQEVAGRHRDRELEKQLAVLRVE 672
Cdd:COG1196 399 AAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAA 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 673 ADRGRELEEQNLQLQKTLQQLRQDceEASKAKMVAEAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKETRGL 752
Cdd:COG1196 479 LAELLEELAEAAARLLLLLEAEAD--YEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDD 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 753 VDGGEAVEARLRDKLQRLEAEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREV 832
Cdd:COG1196 557 EVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAAL 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 833 LRRGKAELEEQKRLLDRTVDRLNKELEKIGEDSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEKtsgglsRLQ 912
Cdd:COG1196 637 RRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEER------ELA 710
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16262452 913 DEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLETELDE 980
Cdd:COG1196 711 EAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
363-918 |
1.66e-18 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 91.54 E-value: 1.66e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 363 ELTRKVEELQRKLDEEVKKRQKLEPSQVGLERQLEEKTEECSRLQELLERRKGEAQQSNKELQNMKRLLDQGEDLRHGLE 442
Cdd:COG1196 236 ELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 443 TQVMELQNKL----KHVQGPEPAKEVLLKDLLETRELLEEVLEGKQRVEEQLRLRERELTALKGALKEEvASRDQEVEHV 518
Cdd:COG1196 316 ERLEELEEELaeleEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEEL-AEELLEALRA 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 519 RQQYQRDTEQLRRSMQDATQDHAVLEAERQKMSALVRGLQRELEETSEEtghwqsmfqknKEDLRATKQELLQLRMEKEE 598
Cdd:COG1196 395 AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEA-----------LEEAAEEEAELEEEEEALLE 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 599 MEEELGEKIEVLQRELEQARASAGDTRQVEVLKKELLRTQEELKELQAERQSQEVAGRHRDRELEKQLAVLRVEADRGRE 678
Cdd:COG1196 464 LLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAA 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 679 LEEQNLQLQKTLQQLRQDCEEASKAKMVAEAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEA 758
Cdd:COG1196 544 LAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLL 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 759 VEARLRDKLQRLEAEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKA 838
Cdd:COG1196 624 GRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEE 703
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 839 ELEEQKRLLDRTVDRLNKELEKIGEDSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEKtsggLSRLQDEIQRL 918
Cdd:COG1196 704 EEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERE----LERLEREIEAL 779
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
612-1179 |
2.54e-14 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 78.26 E-value: 2.54e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 612 RELEQARASAGDTRQVEVLKKELLRTQEELKELQAERQSQEVAGRHRDRELE---KQLAVLRVEADRGRElEEQNLQLQK 688
Cdd:PTZ00121 1170 RKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEdakKAEAVKKAEEAKKDA-EEAKKAEEE 1248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 689 TLQQLRQDCEEASKAKMVAEAEATVLGQRRAAVETTLRETQEENDEFRRrilglEQQLKETRGLVDGGEavEARLRDKLQ 768
Cdd:PTZ00121 1249 RNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKK-----AEEKKKADEAKKKAE--EAKKADEAK 1321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 769 RLEAEKQQLEEALNASQEEEGSLAAAKRALEarlEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLD 848
Cdd:PTZ00121 1322 KKAEEAKKKADAAKKKAEEAKKAAEAAKAEA---EAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKK 1398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 849 RTVDRLNK--ELEKIGEDSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAE--KTSGGLSRLQDEIQRLRQALQA 924
Cdd:PTZ00121 1399 KAEEDKKKadELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEeaKKAEEAKKKAEEAKKADEAKKK 1478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 925 SQAERDTARLDK--ELLAQRLQGLEQEAENKKRsqddrARQLKGLEEKVSRLETELDEEKNTVELLtdRVNRGRDQVDQL 1002
Cdd:PTZ00121 1479 AEEAKKADEAKKkaEEAKKKADEAKKAAEAKKK-----ADEAKKAEEAKKADEAKKAEEAKKADEA--KKAEEKKKADEL 1551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1003 R-TELMQERSARQDLECDKISLERQNKDLKTrlassegfqkpSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERK 1081
Cdd:PTZ00121 1552 KkAEELKKAEEKKKAEEAKKAEEDKNMALRK-----------AEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKI 1620
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1082 VKELSIQIEDERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQRE--------VEEQHEVNEQLQARIKSLE 1153
Cdd:PTZ00121 1621 KAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDkkkaeeakKAEEDEKKAAEALKKEAEE 1700
|
570 580
....*....|....*....|....*.
gi 16262452 1154 KDSWRKASRSAAESALKNEGLSSDEE 1179
Cdd:PTZ00121 1701 AKKAEELKKKEAEEKKKAEELKKAEE 1726
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
363-862 |
2.94e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 78.05 E-value: 2.94e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 363 ELTRKVEELQRKLDEEVKKRQKLEPSqvgLERQLEEK---TEECSRLQELLERRKGEAQQSNKELQNMKRLLDQGEDLRH 439
Cdd:COG1196 292 ELLAELARLEQDIARLEERRRELEER---LEELEEELaelEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALL 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 440 GLETQVMELQNKLKHvqgpepAKEVLLKDLLETRELLEEVLEGKQRVEEQLRLRERELTALKGALKEEVASRDQEVEHVR 519
Cdd:COG1196 369 EAEAELAEAEEELEE------LAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEE 442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 520 QQYQRDTEQLRRSMQDATQDHAVLEAERQKMSALVRGLQRELEETSEETGHW--QSMFQKNKEDLRATKQELLQLRMEKE 597
Cdd:COG1196 443 ALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLllLEAEADYEGFLEGVKAALLLAGLRGL 522
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 598 EMEEELGEKIEVLQRELEQARASAGDTRQVEVLKKELLRTQEELKELQAERQSQEVAGRHRDRELeKQLAVLRVEADRGR 677
Cdd:COG1196 523 AGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAA-LAAALARGAIGAAV 601
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 678 ELEEQNLQLQKTLQQLRQDceeaskAKMVAEAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKETRGLVDGGE 757
Cdd:COG1196 602 DLVASDLREADARYYVLGD------TLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALL 675
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 758 AVEARLRDKLQRLEAEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGK 837
Cdd:COG1196 676 EAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEE 755
|
490 500
....*....|....*....|....*
gi 16262452 838 AELEEQKRLLDRTVDRLNKELEKIG 862
Cdd:COG1196 756 LPEPPDLEELERELERLEREIEALG 780
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
795-1173 |
4.80e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 77.40 E-value: 4.80e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 795 KRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREV---LRRGKAELEE-QKRLLDRTVDRLNKELEKIGEDskqalq 870
Cdd:TIGR02168 174 RKETERKLERTRENLDRLEDILNELERQLKSLERQAEKaerYKELKAELRElELALLVLRLEELREELEELQEE------ 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 871 qlqaqledyKEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEA 950
Cdd:TIGR02168 248 ---------LKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQL 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 951 ENKKRSQDDRARQLKGLEEKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDL 1030
Cdd:TIGR02168 319 EELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASL 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1031 KTRLASSEgfqkpsASLSQLESQNQLLQERLQAEEREKTvlqstnrklERKVKELSIQIEDERQHVNDqkdqlslrvkaL 1110
Cdd:TIGR02168 399 NNEIERLE------ARLERLEDRRERLQQEIEELLKKLE---------EAELKELQAELEELEEELEE-----------L 452
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16262452 1111 KRQVDEAEEEIERLDGLRKKAQREVEEQHEVNEQLQARIKSLEKDSWRKASRSAAESALKNEG 1173
Cdd:TIGR02168 453 QEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQ 515
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
358-1035 |
5.35e-14 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 77.49 E-value: 5.35e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 358 VAGQGELTRKVEELQRKldEEVKKRQKLEPSQVGLERQLEEKTEECSRLQELlerRKGEAQQSNKELQNMKRLLDQGEDL 437
Cdd:PTZ00121 1168 EARKAEDAKKAEAARKA--EEVRKAEELRKAEDARKAEAARKAEEERKAEEA---RKAEDAKKAEAVKKAEEAKKDAEEA 1242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 438 RHGLETQVMELQNKLKHVQGPEPAKEVLLKDLLETRELLEEVLEGKQRVEEQLRLRERELTALKGALKEEVASRDQEVEH 517
Cdd:PTZ00121 1243 KKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKK 1322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 518 VRQQYQRDTEQLRRSMQDATQDHAVLEAERQKMSALVRGLQRELE----ETSEETGHWQSMFQKNKEdlrATKQELLQLR 593
Cdd:PTZ00121 1323 KAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEaaekKKEEAKKKADAAKKKAEE---KKKADEAKKK 1399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 594 MEKEEMEEELGEKIEVLQRELEQARASAGDTRQVEVLKK--ELLRTQEELKELQAE-RQSQEVAGRHRDRELEKQLAVLR 670
Cdd:PTZ00121 1400 AEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKkaEEAKKADEAKKKAEEaKKAEEAKKKAEEAKKADEAKKKA 1479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 671 VEADRGRELEEQNLQLQKTLQQLRQDCEEASKAKMVAEAEatvlgQRRAAVETTLRETQEENDEFRRRilgleqqlKETR 750
Cdd:PTZ00121 1480 EEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAE-----EAKKADEAKKAEEAKKADEAKKA--------EEKK 1546
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 751 GLVDGGEAVEARLRDKLQRLEAEKQQLEEALNASQEEEgslaAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQR 830
Cdd:PTZ00121 1547 KADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAE----EAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKA 1622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 831 EVLRR-----------GKAELEEQKRLldrtvdrlnKELEKIGEDSKQALQQLQAQLEDYKEKA---RREVADAQRQAKD 896
Cdd:PTZ00121 1623 EELKKaeeekkkveqlKKKEAEEKKKA---------EELKKAEEENKIKAAEEAKKAEEDKKKAeeaKKAEEDEKKAAEA 1693
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 897 WASEAEKTSGGLSRLQDEIQRLRQALQASQAErdtarldkELLAQRLQGLEQEAENKKRsqddRARQLKGLEekvsrlet 976
Cdd:PTZ00121 1694 LKKEAEEAKKAEELKKKEAEEKKKAEELKKAE--------EENKIKAEEAKKEAEEDKK----KAEEAKKDE-------- 1753
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*....
gi 16262452 977 eldEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDlECDKISLERQNKDLKTRLA 1035
Cdd:PTZ00121 1754 ---EEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEED-EKRRMEVDKKIKDIFDNFA 1808
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
614-1148 |
1.59e-13 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 75.46 E-value: 1.59e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 614 LEQARASAGDTR-QVEVLKKEllrTQEELKELQAERQSQEVAGRH-RDRELEKQLAVLRVEADRGRELEEQNLQLQKTLQ 691
Cdd:PRK02224 164 LEEYRERASDARlGVERVLSD---QRGSLDQLKAQIEEKEEKDLHeRLNGLESELAELDEEIERYEEQREQARETRDEAD 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 692 QLRQDCEEASKAKMVAEAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQRLE 771
Cdd:PRK02224 241 EVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 772 AEKQQLEEAL-------NASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQK 844
Cdd:PRK02224 321 DRDEELRDRLeecrvaaQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERF 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 845 RLLDRTVDRLNKELEKIGEDSKQALQQLQAQLEDYKEkARREVADAQR-QAKDWASEAEKTSGGlSRLQDEIQRLRQALQ 923
Cdd:PRK02224 401 GDAPVDLGNAEDFLEELREERDELREREAELEATLRT-ARERVEEAEAlLEAGKCPECGQPVEG-SPHVETIEEDRERVE 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 924 ASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDdrarqlkgLEEKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLR 1003
Cdd:PRK02224 479 ELEAELEDLEEEVEEVEERLERAEDLVEAEDRIER--------LEERREDLEELIAERRETIEEKRERAEELRERAAELE 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1004 TELMQERSARQDLEcdkislerqnkdlktrlassEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLqSTNRKLERKVK 1083
Cdd:PRK02224 551 AEAEEKREAAAEAE--------------------EEAEEAREEVAELNSKLAELKERIESLERIRTLL-AAIADAEDEIE 609
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16262452 1084 ELsiqiEDERQHVNDQKDQLSLRVKALKRQVDEAEEEI--ERLDGLRKKAQREVEEQHEVNEQLQAR 1148
Cdd:PRK02224 610 RL----REKREALAELNDERRERLAEKRERKRELEAEFdeARIEEAREDKERAEEYLEQVEEKLDEL 672
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
489-1162 |
1.81e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 75.49 E-value: 1.81e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 489 QLRLRERELTALKGALKEEVASRDQ---EVEHVRQQYQRDTEQLRRSMQDATQDHAVLEAERQKMSALVRGLQRELEETS 565
Cdd:TIGR02169 217 LKEKREYEGYELLKEKEALERQKEAierQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKI 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 566 EEtghwqsmFQKNKEDLRATKQELLQLRMEKEEMEEELGEKIEVLQRELEQARasagdtRQVEVLKKELLRTQEELKELQ 645
Cdd:TIGR02169 297 GE-------LEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELE------REIEEERKRRDKLTEEYAELK 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 646 AERQsqevAGRHRDRELEKQLAVLRVE-ADRGRELEEQNLQLQKTLQQLRQDCEEASKAKMV---AEAEATVLGQRRAAV 721
Cdd:TIGR02169 364 EELE----DLRAELEEVDKEFAETRDElKDYREKLEKLKREINELKRELDRLQEELQRLSEEladLNAAIAGIEAKINEL 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 722 ETTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQRLEAEKQQLEEALNASQEEEGSLAAAKRALEAR 801
Cdd:TIGR02169 440 EEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKAS 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 802 LEEAQRGLARLGQEQQTLNRALEEEGKQR--------EVLRRGKAELEEQKRLLDRTVDRLNK------ELEKIGEDSKQ 867
Cdd:TIGR02169 520 IQGVHGTVAQLGSVGERYATAIEVAAGNRlnnvvvedDAVAKEAIELLKRRKAGRATFLPLNKmrderrDLSILSEDGVI 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 868 ALQQLQAQLEDYKEKARREV----------ADAQRQ------------------AKDWASEAEKTSGGLSR-LQDEIQRL 918
Cdd:TIGR02169 600 GFAVDLVEFDPKYEPAFKYVfgdtlvvediEAARRLmgkyrmvtlegelfeksgAMTGGSRAPRGGILFSRsEPAELQRL 679
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 919 RQALQASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLETELDEEKNTVELLTDRVNRGRDQ 998
Cdd:TIGR02169 680 RERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSE 759
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 999 VDQLRTELmqersarQDLECDKISLERQNKDLKTRLaSSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKL 1078
Cdd:TIGR02169 760 LKELEARI-------EELEEDLHKLEEALNDLEARL-SHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYL 831
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1079 ERKVKELSIQI---EDERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQREVEEQHEVNEQLQARIKSLEKD 1155
Cdd:TIGR02169 832 EKEIQELQEQRidlKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQ 911
|
....*..
gi 16262452 1156 SWRKASR 1162
Cdd:TIGR02169 912 IEKKRKR 918
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
610-1162 |
2.01e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 75.09 E-value: 2.01e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 610 LQRELEQARASAGdTRQVEVLKKELLRTQEELKELQaerqSQEVAGRHRDRELEKQLAVLRVEAdrgRELEEQNLQLQKT 689
Cdd:TIGR02168 218 LKAELRELELALL-VLRLEELREELEELQEELKEAE----EELEELTAELQELEEKLEELRLEV---SELEEEIEELQKE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 690 LQQLRQDCEEASKAKMVAEAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQR 769
Cdd:TIGR02168 290 LYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 770 LEAEKQQLEEALNAS-------QEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEegKQREVLRRGKAELEE 842
Cdd:TIGR02168 370 LESRLEELEEQLETLrskvaqlELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEE--AELKELQAELEELEE 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 843 QKRLLDRTVDRLNKELEKIGEDSKQALQQLQAQLEDYKEKARR---------EVADAQRQAKDWASEAEKTSGGLSRLQD 913
Cdd:TIGR02168 448 ELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARldslerlqeNLEGFSEGVKALLKNQSGLSGILGVLSE 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 914 EIQ---RLRQALQASQAER---------DTARLDKELLAQRLQG----LEQEAENKKRSQDDRARQLKGLEEKV---SRL 974
Cdd:TIGR02168 528 LISvdeGYEAAIEAALGGRlqavvvenlNAAKKAIAFLKQNELGrvtfLPLDSIKGTEIQGNDREILKNIEGFLgvaKDL 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 975 ETELDEEKNTVELLTDRV------------------------------------NRGRDQVDQLRTELMQERSarqDLEC 1018
Cdd:TIGR02168 608 VKFDPKLRKALSYLLGGVlvvddldnalelakklrpgyrivtldgdlvrpggviTGGSAKTNSSILERRREIE---ELEE 684
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1019 DKISLERQNKDLKTRLASSEgfqkpsASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERKVK---ELSIQIEDERQH 1095
Cdd:TIGR02168 685 KIEELEEKIAELEKALAELR------KELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEqleERIAQLSKELTE 758
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16262452 1096 VNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQREVEEQHEVNEQLQARIKSLEKDSWRKASR 1162
Cdd:TIGR02168 759 LEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRER 825
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
363-1150 |
5.47e-13 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 74.00 E-value: 5.47e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 363 ELTRKVEELQRKLDE--EVKKRQK--LEPSQVGLERQLEEKTEECSRLQELLERRKGEAQQSNKELQNMKRLLDQG---- 434
Cdd:pfam15921 82 EYSHQVKDLQRRLNEsnELHEKQKfyLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAkclk 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 435 EDLRHGLETQVMELQNKLKHVQGPEPAKEVLLKDLLETRELLEEVLEGKQR---------VEEQLRLRERELTALKG--- 502
Cdd:pfam15921 162 EDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTmhfrslgsaISKILRELDTEISYLKGrif 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 503 ----ALKEEVASRDQEVEHVRQQYQRDTEQLrrsMQDATQDHAVLEAERQKMSALVRGLQRELEETSEETGHWQSMFQKN 578
Cdd:pfam15921 242 pvedQLEALKSESQNKIELLLQQHQDRIEQL---ISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQ 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 579 KEDLRATkqellqlrmekeemeeelgekIEVLQRELEQARASAGDtrQVEVLKKELLRTQEELKELQAERQSQEVAGRHR 658
Cdd:pfam15921 319 LSDLEST---------------------VSQLRSELREAKRMYED--KIEELEKQLVLANSELTEARTERDQFSQESGNL 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 659 DRELEKQLAVLRveaDRGRELEEQNLQLQKTLQQLRQDCEEASKAKMVAEAEATVLGQRRAAVETTLRETQEENDEFRRR 738
Cdd:pfam15921 376 DDQLQKLLADLH---KREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAA 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 739 ILGLEQQLKETRGLVDGGEAVEARLRDKLQRLEAEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQT 818
Cdd:pfam15921 453 IQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQE 532
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 819 LNRALEEEGKQREVLRRGKAeLEEQKRLLDRTVDRLNKELEKIGEdskqalqqlqaqledykekarrEVADAQRQAKdwA 898
Cdd:pfam15921 533 LQHLKNEGDHLRNVQTECEA-LKLQMAEKDKVIEILRQQIENMTQ----------------------LVGQHGRTAG--A 587
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 899 SEAEKtsgglSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLETEL 978
Cdd:pfam15921 588 MQVEK-----AQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEV 662
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 979 DEEKNTVELLTDRVN----RGRDQVDQLRTEL----MQERSARQDLECDKISLERQNKDLKTRLASSEGFQK----PSAS 1046
Cdd:pfam15921 663 KTSRNELNSLSEDYEvlkrNFRNKSEEMETTTnklkMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKqitaKRGQ 742
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1047 LSQLESQNQLLQERLQAEEREKTVLQSTNRKLErkvKELSIqiederqhVNDQKDQLSLRVKALKRQVDEAEEEIERLDG 1126
Cdd:pfam15921 743 IDALQSKIQFLEEAMTNANKEKHFLKEEKNKLS---QELST--------VATEKNKMAGELEVLRSQERRLKEKVANMEV 811
|
810 820
....*....|....*....|....*..
gi 16262452 1127 LRKKAQREVEEQHEV---NEQLQARIK 1150
Cdd:pfam15921 812 ALDKASLQFAECQDIiqrQEQESVRLK 838
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
921-1173 |
1.33e-11 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 67.87 E-value: 1.33e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 921 ALQASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLETELDEEKNTVELLTDRVNRGRDQVD 1000
Cdd:COG4942 14 AAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1001 QLRTELMQERSARQDLECDKISLERQNKDLktRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLER 1080
Cdd:COG4942 94 ELRAELEAQKEELAELLRALYRLGRQPPLA--LLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEA 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1081 KVKELSIQIEDERQhvndqkdqlslRVKALKRQVDEAEEEIERLDGLRKKAQREVEEQHEVNEQLQARIKSLEKDSWRKA 1160
Cdd:COG4942 172 ERAELEALLAELEE-----------ERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
250
....*....|...
gi 16262452 1161 SRSAAESALKNEG 1173
Cdd:COG4942 241 ERTPAAGFAALKG 253
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
544-1119 |
1.62e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 68.91 E-value: 1.62e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 544 EAERQKMSALVRGLQRELEETSEETGHwqsmFQKNKEDLRATKQELlqlrMEKEEMEEELGEKIEVLQRELEQARAS-AG 622
Cdd:PRK02224 198 EKEEKDLHERLNGLESELAELDEEIER----YEEQREQARETRDEA----DEVLEEHEERREELETLEAEIEDLRETiAE 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 623 DTRQVEVLKKELLRTQEELKELQAERqSQEVAGRHRDRELEKQLAVLRVE-ADRGRELEEQNLQLQKTLQQLRQDCEEAS 701
Cdd:PRK02224 270 TEREREELAEEVRDLRERLEELEEER-DDLLAEAGLDDADAEAVEARREElEDRDEELRDRLEECRVAAQAHNEEAESLR 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 702 KAKMVAEAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEavearlrDKLQRLEAEKQQLEEAL 781
Cdd:PRK02224 349 EDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAP-------VDLGNAEDFLEELREER 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 782 NASQEEEGSLaaakralEARLEEAQRGLARlgqeqqtlNRALEEEGKQREVlrrgKAELEEQKRlldrtVDRLNKELEKI 861
Cdd:PRK02224 422 DELREREAEL-------EATLRTARERVEE--------AEALLEAGKCPEC----GQPVEGSPH-----VETIEEDRERV 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 862 GEdskqalqqlqaqLEDYKEKARREVADAQrQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQ 941
Cdd:PRK02224 478 EE------------LEAELEDLEEEVEEVE-ERLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRE 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 942 RLQGLEQEAE------NKKRSQDDRARQ-LKGLEEKVSRLETELDEEKNTVELLTDRVNRgRDQVDQLRtELMQERSARQ 1014
Cdd:PRK02224 545 RAAELEAEAEekreaaAEAEEEAEEAREeVAELNSKLAELKERIESLERIRTLLAAIADA-EDEIERLR-EKREALAELN 622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1015 DLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERKVKELSiQIEDERQ 1094
Cdd:PRK02224 623 DERRERLAEKRERKRELEAEFDEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELE-ELRERRE 701
|
570 580
....*....|....*....|....*
gi 16262452 1095 HVNDqkdqlslRVKALKRQVDEAEE 1119
Cdd:PRK02224 702 ALEN-------RVEALEALYDEAEE 719
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
359-1179 |
5.36e-11 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 67.30 E-value: 5.36e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 359 AGQGELTRKVEELQRKLDEEVKKRQKLEPSQVGLERQLEEKTEECSRLQELLERRKGE---------AQQSNKELQNMKR 429
Cdd:pfam02463 162 AAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLeleeeyllyLDYLKLNEERIDL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 430 LLDQGEDLRHGLETQVMELQN---KLKHVQGPEPAKEVLLKDLLETRELLEEVLEGKQRVEEQLRLRERELTALKGALKE 506
Cdd:pfam02463 242 LQELLRDEQEEIESSKQEIEKeeeKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEK 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 507 EVASRDQEVEHVRQQ----------YQRDTEQLRRSMQDATQDHAVLEAERQKMSALVRGLQRELEETSEETGHWQSMFQ 576
Cdd:pfam02463 322 EKKKAEKELKKEKEEieelekelkeLEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKS 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 577 KNKEDLRATKQELLQLRMEKEEMEEELGEKIEVLQRELEQARASA---GDTRQVEVLKKELLRTQEELKELQAERQSQEV 653
Cdd:pfam02463 402 EEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLteeKEELEKQELKLLKDELELKKSEDLLKETQLVK 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 654 AGRHRDRELEKQLAVLRVEADRGRELEEQNLQLQKTLQQLRQDCEEASKAKMVAEAEATVLGQRRAAVETTLRETQEEND 733
Cdd:pfam02463 482 LQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVE 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 734 EFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLqrleaeKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLG 813
Cdd:pfam02463 562 ERQKLVRALTELPLGARKLRLLIPKLKLPLKSIA------VLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELT 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 814 QEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNKELEKIGEDSKQALQQLQAQLEDYKEKARREVADAQRQ 893
Cdd:pfam02463 636 KLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKL 715
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 894 AKD-WASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEaENKKRSQDDRARQLKGLEEKVS 972
Cdd:pfam02463 716 KLEaEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLK-EKELAEEREKTEKLKVEEEKEE 794
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 973 RLETELDEEKNTVELLTDRVNRGR-DQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEgfqkpsaSLSQLE 1051
Cdd:pfam02463 795 KLKAQEEELRALEEELKEEAELLEeEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEE-------EITKEE 867
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1052 SQNQLLQERLQAEEREKTVLQSTNRKLERKVKELSIQIEDERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKA 1131
Cdd:pfam02463 868 LLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADE 947
|
810 820 830 840
....*....|....*....|....*....|....*....|....*...
gi 16262452 1132 QREVEEQHEVNEQLQARIKSLEKDSWRKASRSAAESALKNEGLSSDEE 1179
Cdd:pfam02463 948 KEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDEL 995
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
357-857 |
5.70e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 67.27 E-value: 5.70e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 357 AVAGQGELTRKVEELQRKLDEEVKKRQKLEPSQVGLERQLEEKTEECSRLQELLERRKGEAQQSNKELQNMKRLLDQGED 436
Cdd:COG1196 370 AEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAE 449
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 437 LRHGLETQVMELQNKLKhvqgpepakevllkdlLETRELLEEVLEGKQRVEEQLRLRERELTALKGALKEEVASRDQEVE 516
Cdd:COG1196 450 EEAELEEEEEALLELLA----------------ELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAA 513
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 517 HVRQQYQRDTEQLRRSMQDATQDHAVLEAErqkMSALVRGLQRELEETSEETGHwqsmFQKNKEDLRATKQELLQLRMEK 596
Cdd:COG1196 514 LLLAGLRGLAGAVAVLIGVEAAYEAALEAA---LAAALQNIVVEDDEVAAAAIE----YLKAAKAGRATFLPLDKIRARA 586
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 597 EEMEEELGEKIEVLQRELEQARASAgDTRQVEVLKKELLRTQEELKELQAERQSQEVAGRHRDRELEKQLAVLRVEADRG 676
Cdd:COG1196 587 ALAAALARGAIGAAVDLVASDLREA-DARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGG 665
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 677 RELEEQNLQLqktlqqlrqdceeaskakmVAEAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKETRGLVdgg 756
Cdd:COG1196 666 SRRELLAALL-------------------EAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEE--- 723
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 757 EAVEARLRDKLQRLEAEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGqeqqTLN-RALEEEGKQRE---V 832
Cdd:COG1196 724 EALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALG----PVNlLAIEEYEELEErydF 799
|
490 500
....*....|....*....|....*
gi 16262452 833 LRRGKAELEEQKRLLDRTVDRLNKE 857
Cdd:COG1196 800 LSEQREDLEEARETLEEAIEEIDRE 824
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
484-978 |
7.43e-11 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 66.86 E-value: 7.43e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 484 QRVEEQLRLRERELTALKGALKEEVASRDQEVEHVRQQYQ----RDTEQLRRSMQDATQDHAVLEAERQKMSALVRGLQR 559
Cdd:COG4913 294 EAELEELRAELARLEAELERLEARLDALREELDELEAQIRgnggDRLEQLEREIERLERELEERERRRARLEALLAALGL 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 560 ELEETSEEtghwqsmFQKNKEDLRATKQELLQLRMEKEEMEEELGEKIEVLQRELEQARAsagdtrQVEVLKK------- 632
Cdd:COG4913 374 PLPASAEE-------FAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEA------EIASLERrksnipa 440
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 633 ELLRTQEELKELQAERQSQ--------EVAGRHRDRE--LEKQL---------------AVLR-VEADRGRELEEQNLQL 686
Cdd:COG4913 441 RLLALRDALAEALGLDEAElpfvgeliEVRPEEERWRgaIERVLggfaltllvppehyaAALRwVNRLHLRGRLVYERVR 520
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 687 QKTLQQLRQDCEEASKAKMVAEAE-------ATVLGQRRAAVettLRETQEENDEFRRRILgLEQQLKE--TRGLVDGGE 757
Cdd:COG4913 521 TGLPDPERPRLDPDSLAGKLDFKPhpfrawlEAELGRRFDYV---CVDSPEELRRHPRAIT-RAGQVKGngTRHEKDDRR 596
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 758 AVEARL------RDKLQRLEAEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRgLARLGQEQQTLnraleeEGKQRE 831
Cdd:COG4913 597 RIRSRYvlgfdnRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQR-LAEYSWDEIDV------ASAERE 669
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 832 VlrrgkAELEEQKRLLDRTVDRLnKELEKIgedskqalqqlqaqledyKEKARREVADAQRQAKDWASEAEKTSGGLSRL 911
Cdd:COG4913 670 I-----AELEAELERLDASSDDL-AALEEQ------------------LEELEAELEELEEELDELKGEIGRLEKELEQA 725
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16262452 912 QDEIQRLRQALQAsqAERDTARLDKELLAQRLQGLEQEaENKKRSQDDRARQLKGLEEKVSRLETEL 978
Cdd:COG4913 726 EEELDELQDRLEA--AEDLARLELRALLEERFAAALGD-AVERELRENLEERIDALRARLNRAEEEL 789
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
733-1166 |
1.68e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 65.71 E-value: 1.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 733 DEFRRRILGLEQQLKETRGLVDGGEAVEArLRDKLQRLEAEKQQL-----EEALNASQEEEGSLAAAKRALEARLEEAQR 807
Cdd:COG4913 238 ERAHEALEDAREQIELLEPIRELAERYAA-ARERLAELEYLRAALrlwfaQRRLELLEAELEELRAELARLEAELERLEA 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 808 GLARLGQEQQTLNRALEEEGKQR-EVLRRGKAELEEQKRLLDRTVDRLNKELEKIGEDskqalqqLQAQLEDYKEkARRE 886
Cdd:COG4913 317 RLDALREELDELEAQIRGNGGDRlEQLEREIERLERELEERERRRARLEALLAALGLP-------LPASAEEFAA-LRAE 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 887 VADAQRQAKDWASEAEKTsggLSRLQDEIQRLRQALQASQAERDTAR-----LDKELLAQRLQgLEQEAENKKR------ 955
Cdd:COG4913 389 AAALLEALEEELEALEEA---LAEAEAALRDLRRELRELEAEIASLErrksnIPARLLALRDA-LAEALGLDEAelpfvg 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 956 -----SQDDRA------RQLKGL-------EEKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTE------------ 1005
Cdd:COG4913 465 elievRPEEERwrgaieRVLGGFaltllvpPEHYAAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDpdslagkldfkp 544
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1006 ------LMQERSARQDLEC----------DK-ISLERQNKDLKTRLASseGFQKPSASLSQLESQN----QLLQERLQAE 1064
Cdd:COG4913 545 hpfrawLEAELGRRFDYVCvdspeelrrhPRaITRAGQVKGNGTRHEK--DDRRRIRSRYVLGFDNraklAALEAELAEL 622
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1065 EREKTVLQSTNRKLERKVKELSIQ-------------------IEDERQHVNDQKDQL---SLRVKALKRQVDEAEEEIE 1122
Cdd:COG4913 623 EEELAEAEERLEALEAELDALQERrealqrlaeyswdeidvasAEREIAELEAELERLdasSDDLAALEEQLEELEAELE 702
|
490 500 510 520
....*....|....*....|....*....|....*....|....
gi 16262452 1123 RLDGLRKKAQREVEEQHEVNEQLQARIKSLEKDSWRKASRSAAE 1166
Cdd:COG4913 703 ELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLE 746
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
610-1155 |
2.04e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 65.47 E-value: 2.04e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 610 LQRELEQARASAgDTRQVEVLKKELLRTQEELKELQAERQSQEVAGRHRDRELEKQLAVLRVEADRGRELEEQNLQLQKT 689
Cdd:TIGR02169 216 LLKEKREYEGYE-LLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKE 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 690 LQQLRqdceEASKAKMVAEAEATVLGQRRAavETTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQR 769
Cdd:TIGR02169 295 KIGEL----EAEIASLERSIAEKERELEDA--EERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELED 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 770 LEAEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDR 849
Cdd:TIGR02169 369 LRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKAL 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 850 TVDRLNKELEKIGEDSKQALQQLQAQLEDYKE------KARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQ------- 916
Cdd:TIGR02169 449 EIKKQEWKLEQLAADLSKYEQELYDLKEEYDRvekelsKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQgvhgtva 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 917 ---RLRQALQASQAERDTARLDKELLAQRLQGlEQEAENKKRSQDDRARQLKGLEEKVSRLETELDEEKNTVELLTDRVN 993
Cdd:TIGR02169 529 qlgSVGERYATAIEVAAGNRLNNVVVEDDAVA-KEAIELLKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGFAVDLVE 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 994 ---RGRDQVDQ-LRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLS----QLESQNQLLQERLQAEE 1065
Cdd:TIGR02169 608 fdpKYEPAFKYvFGDTLVVEDIEAARRLMGKYRMVTLEGELFEKSGAMTGGSRAPRGGIlfsrSEPAELQRLRERLEGLK 687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1066 REKTVLQSTNRKLERKVKELSIQIED----------ERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQREV 1135
Cdd:TIGR02169 688 RELSSLQSELRRIENRLDELSQELSDasrkigeiekEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARI 767
|
570 580
....*....|....*....|
gi 16262452 1136 EEQHEVNEQLQARIKSLEKD 1155
Cdd:TIGR02169 768 EELEEDLHKLEEALNDLEAR 787
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
761-996 |
2.23e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 64.01 E-value: 2.23e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 761 ARLRDKLQRLEAEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRrgkAEL 840
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR---AEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 841 EEQKRLLDRTVDRLNKElekigedSKQALQQLQAQLEDYKEKARRE--VADAQRQAKDWASEAEKTSGGLSRLQDEIQRL 918
Cdd:COG4942 100 EAQKEELAELLRALYRL-------GRQPPLALLLSPEDFLDAVRRLqyLKYLAPARREQAEELRADLAELAALRAELEAE 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 919 RQALQASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDDRARQLKG----LEEKVSRLETELDEEKNTVELLTDRVNR 994
Cdd:COG4942 173 RAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQeaeeLEALIARLEAEAAAAAERTPAAGFAALK 252
|
..
gi 16262452 995 GR 996
Cdd:COG4942 253 GK 254
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
382-861 |
4.80e-10 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 63.63 E-value: 4.80e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 382 RQKLEPSQVGLERQLEEKTEECSRLQELLERRKGEAQQSNKELQNMKRLLDQGEDLRHGLETQVMELQNKLKHVQgpepa 461
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLE----- 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 462 KEVLLKDLLETRELLEEVLEGKQRVEEQLRLRERELTALKGALKEEVASRDQEVEHVRQQYQRDTEQLRRSMQDATQDHA 541
Cdd:COG4717 123 KLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELE 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 542 VLEAERQKMSALVRGLQRELEETSEETGHWQSMFQKNKEDLRATKQELLQLRMEKEEMEEELGEKIEVLQRELEQARASA 621
Cdd:COG4717 203 ELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLV 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 622 G---------DTRQVEVLKKELLRTQ--EELKELQAERQSQEVAGRHRDRELEKQLavLRVEADRGRELEEQNLQLQKTL 690
Cdd:COG4717 283 LgllallfllLAREKASLGKEAEELQalPALEELEEEELEELLAALGLPPDLSPEE--LLELLDRIEELQELLREAEELE 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 691 QQLRQDCEEASKAKMVAEAEATVLGQRRAAVettlrETQEENDEFRRRILGLEQQLKEtrglvDGGEAVEARLRDKLQRL 770
Cdd:COG4717 361 EELQLEELEQEIAALLAEAGVEDEEELRAAL-----EQAEEYQELKEELEELEEQLEE-----LLGELEELLEALDEEEL 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 771 EAEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRG--LARLGQEQQTLNRALEEEGKQREVLRRGKAELEE-QKRLL 847
Cdd:COG4717 431 EEELEELEEELEELEEELEELREELAELEAELEQLEEDgeLAELLQELEELKAELRELAEEWAALKLALELLEEaREEYR 510
|
490
....*....|....
gi 16262452 848 DRTVDRLNKELEKI 861
Cdd:COG4717 511 EERLPPVLERASEY 524
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
763-1154 |
7.39e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 63.50 E-value: 7.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 763 LRDKLQRLEAEKQQLEEALNASQEE----EGSLAAAKRALEAR---LEEAQRGLARLGQEQQTLNRALEEEGKQRE--VL 833
Cdd:TIGR04523 230 LKDNIEKKQQEINEKTTEISNTQTQlnqlKDEQNKIKKQLSEKqkeLEQNNKKIKELEKQLNQLKSEISDLNNQKEqdWN 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 834 RRGKAELEEQKRLLDRTVDRLNKELEKIGE--DSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGGLSRL 911
Cdd:TIGR04523 310 KELKSELKNQEKKLEEIQNQISQNNKIISQlnEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNL 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 912 QDEIQRLRQALQasQAERDTARLDKEL--LAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLETEL-------DEEK 982
Cdd:TIGR04523 390 ESQINDLESKIQ--NQEKLNQQKDEQIkkLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIknldntrESLE 467
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 983 NTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSegfqkpsaslsqLESQNQLlqerlq 1062
Cdd:TIGR04523 468 TQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSL------------KEKIEKL------ 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1063 aeEREKTVLQSTNRKLERKVKEL-----SIQIEDERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQREVEE 1137
Cdd:TIGR04523 530 --ESEKKEKESKISDLEDELNKDdfelkKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEE 607
|
410
....*....|....*..
gi 16262452 1138 QHEVNEQLQARIKSLEK 1154
Cdd:TIGR04523 608 KEKKISSLEKELEKAKK 624
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
799-1154 |
7.84e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 63.55 E-value: 7.84e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 799 EARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNKELEKigedskqalqqlqaqled 878
Cdd:TIGR02169 169 DRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLK------------------ 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 879 YKEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQ-RLQGLEQEAENKKRSQ 957
Cdd:TIGR02169 231 EKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKeKIGELEAEIASLERSI 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 958 DDRARQLKGLEEKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASs 1037
Cdd:TIGR02169 311 AEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKD- 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1038 egfqkpsaslsqlesqnqlLQERLQAEEREKTVLQSTNRKLERKVKELSIQIEDERQHVNDQKDQLslrvKALKRQVDEA 1117
Cdd:TIGR02169 390 -------------------YREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKI----NELEEEKEDK 446
|
330 340 350
....*....|....*....|....*....|....*..
gi 16262452 1118 EEEIERLDGLRKKAQREVEEQHEVNEQLQARIKSLEK 1154
Cdd:TIGR02169 447 ALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEK 483
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
513-1146 |
7.85e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 63.40 E-value: 7.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 513 QEVEHVRQQYQ--RDTEQLRRSMQDATQDHAVLEAERQKMSALVRGLQRELeetseetghWQSMFQKNKEDLRATKQELL 590
Cdd:COG4913 242 EALEDAREQIEllEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLEL---------LEAELEELRAELARLEAELE 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 591 QLRMEKEEMEEELgekievlqRELEQARASAGdTRQVEVLKKELLRTQEELKELQAERQsqevagrhrdrELEKQLAVLR 670
Cdd:COG4913 313 RLEARLDALREEL--------DELEAQIRGNG-GDRLEQLEREIERLERELEERERRRA-----------RLEALLAALG 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 671 VEADRGRE-LEEQNLQLQKTLqqlrqdcEEASKAKMVAEAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKET 749
Cdd:COG4913 373 LPLPASAEeFAALRAEAAALL-------EALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLAL 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 750 RglvdggeaveARLRDKLQRLEAEKQQLEEALNASQEEE---------------------GSLAAAKRALEA-------- 800
Cdd:COG4913 446 R----------DALAEALGLDEAELPFVGELIEVRPEEErwrgaiervlggfaltllvppEHYAAALRWVNRlhlrgrlv 515
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 801 --RLEEAQRGLARLGQEQQTLNRALE-EEGK-----QREVLRRG---KAELEEQKRLLDR--TVDRLNKELEKIGEDSKQ 867
Cdd:COG4913 516 yeRVRTGLPDPERPRLDPDSLAGKLDfKPHPfrawlEAELGRRFdyvCVDSPEELRRHPRaiTRAGQVKGNGTRHEKDDR 595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 868 ALQQLQ----AQLEDYKEKARREVADAQRQAKDWASEAEKtsggLSRLQDEIQRLRQALQAsQAERDTARLDKELLAQRL 943
Cdd:COG4913 596 RRIRSRyvlgFDNRAKLAALEAELAELEEELAEAEERLEA----LEAELDALQERREALQR-LAEYSWDEIDVASAEREI 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 944 QGLEQEAENKKRSQDDrarqLKGLEEKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISL 1023
Cdd:COG4913 671 AELEAELERLDASSDD----LAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLE 746
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1024 ERQnkDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQST-NRKLERKVKELSIQIED----ERQHVND 1098
Cdd:COG4913 747 LRA--LLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAfNREWPAETADLDADLESlpeyLALLDRL 824
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|
gi 16262452 1099 QKDQLSLRVKALKRQVDEAE-EEIERLDGLRKKAQREVEEQ-HEVNEQLQ 1146
Cdd:COG4913 825 EEDGLPEYEERFKELLNENSiEFVADLLSKLRRAIREIKERiDPLNDSLK 874
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
328-894 |
8.30e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 63.16 E-value: 8.30e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 328 ESETSVRRKVSLVLEKMQPLVMVSSGSTKAVAGQGELTRKVEELQRKLDEEVKKRQKLEPSQVGLERQLEEKTEECSRLQ 407
Cdd:PRK03918 200 KELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELE 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 408 ELLERRK-------------GEAQQSNKELQNMKRLLDQGEDLRHGLETQVMELQNKLKHVQGPEPAKEVLLKDLLETRE 474
Cdd:PRK03918 280 EKVKELKelkekaeeyiklsEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 475 LLEEVLEGKQRVEEQLRLREReltaLKGALKEEVASRDQEVEHVRQQYQRDTEQLRRSM-----QDATQDHAVLEAERQK 549
Cdd:PRK03918 360 RHELYEEAKAKKEELERLKKR----LTGLTPEKLEKELEELEKAKEEIEEEISKITARIgelkkEIKELKKAIEELKKAK 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 550 MSALVRGlqRELEEtsEETGHWQSMFQKNKEDLRATKQELlqlrmekeemeEELGEKIEVLQRELEQARASAGDTRQVEV 629
Cdd:PRK03918 436 GKCPVCG--RELTE--EHRKELLEEYTAELKRIEKELKEI-----------EEKERKLRKELRELEKVLKKESELIKLKE 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 630 LKKELLRTQEELKELQAERQSQEVAG----RHRDRELEKQLAVLRVEADRGRELEeqnlqlqktlqqlrqdceeasKAKM 705
Cdd:PRK03918 501 LAEQLKELEEKLKKYNLEELEKKAEEyeklKEKLIKLKGEIKSLKKELEKLEELK---------------------KKLA 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 706 VAEAEATVLGQRRAAVETTLRETQ-EENDEFRRRILGLEQQLKETRGLVDggeaVEARLRDKLQRLEAEKQQLEEALNAS 784
Cdd:PRK03918 560 ELEKKLDELEEELAELLKELEELGfESVEELEERLKELEPFYNEYLELKD----AEKELEREEKELKKLEEELDKAFEEL 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 785 QEEEGSLaaakRALEARLEEAQRGLARlgQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNKELEKIGED 864
Cdd:PRK03918 636 AETEKRL----EELRKELEELEKKYSE--EEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKA 709
|
570 580 590
....*....|....*....|....*....|..
gi 16262452 865 SKQALQ--QLQAQLEDYKEKARREVADAQRQA 894
Cdd:PRK03918 710 KKELEKleKALERVEELREKVKKYKALLKERA 741
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
328-1138 |
8.41e-10 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 63.45 E-value: 8.41e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 328 ESETSVRRKVSLVLEKMQPLVMVSSGSTKAVAGQGELTRKVEELQRKLDEEVKKRQKLEPSqvgLERQLEEKTEECSRLQ 407
Cdd:pfam02463 181 ETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDL---LQELLRDEQEEIESSK 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 408 ELLERRKGEAQQSNKELQNMKRLLDQGEDLRHGLETQVMELQNKLKHVQGPEPAKEVLLKDLLETRELLEEVLEGKQRVE 487
Cdd:pfam02463 258 QEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEI 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 488 EQLRLRERELTALKGALKEEVASRDQEVEHVRQQYQRDTEQLRRSMQDATQDHAVLEAERQKMSALVRGLQRELEETSEE 567
Cdd:pfam02463 338 EELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQL 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 568 tghwqSMFQKNKEDLRATKQELLQLRMEKEEMEEELGEKIEVLQRELEQARAsaGDTRQVEVLKKELLRTQEELKELQAE 647
Cdd:pfam02463 418 -----EDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDE--LELKKSEDLLKETQLVKLQEQLELLL 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 648 RQSQEVAGRHRDRELEKQLAVLRVEADRGRELEEQNLQLQKTLQQLRQDCEEASKAKMVAEAEATVLGQRRAAVETTLRE 727
Cdd:pfam02463 491 SRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRAL 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 728 TQEENDEFRRRILGLEQQLKETRGLV-------------------DGGEAVEARLRDKLQRLEAEKQQLEEALNASQEEE 788
Cdd:pfam02463 571 TELPLGARKLRLLIPKLKLPLKSIAVleidpilnlaqldkatleaDEDDKRAKVVEGILKDTELTKLKESAKAKESGLRK 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 789 GSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNKELEKIGEDSKQA 868
Cdd:pfam02463 651 GVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEA 730
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 869 LQQLQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARL--DKELLAQRLQGL 946
Cdd:pfam02463 731 QDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLkaQEEELRALEEEL 810
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 947 EQEAENKKRSQDDRARQLKGLEEKVSRLETELDEEKNTVELLTDRVNRGRD----QVDQLRTELMQERSARQDLECDKIS 1022
Cdd:pfam02463 811 KEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEeitkEELLQELLLKEEELEEQKLKDELES 890
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1023 LE-RQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERK-------VKELSIQIEDERQ 1094
Cdd:pfam02463 891 KEeKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKeennkeeEEERNKRLLLAKE 970
|
810 820 830 840
....*....|....*....|....*....|....*....|....
gi 16262452 1095 HVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQREVEEQ 1138
Cdd:pfam02463 971 ELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEE 1014
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
734-1154 |
1.34e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 62.77 E-value: 1.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 734 EFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQRLEAEKQQLE---EALNASQEEEGSLAAAKRALEARLEEAQRGLA 810
Cdd:PRK03918 190 NIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEelkEEIEELEKELESLEGSKRKLEEKIRELEERIE 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 811 RLGQEQqtlnRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNkELEKIGEDSKQALQQLQAQLEDYKEKARRevada 890
Cdd:PRK03918 270 ELKKEI----EELEEKVKELKELKEKAEEYIKLSEFYEEYLDELR-EIEKRLSRLEEEINGIEERIKELEEKEER----- 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 891 qrqakdwaseAEKTSGGLSRLQDEIQRLRQALQ----ASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDDRARQLKG 966
Cdd:PRK03918 340 ----------LEELKKKLKELEKRLEELEERHElyeeAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISK 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 967 LEEKVSRLETELDEEKNTVELLTDRVNR----GRDQVDQLRTELMQERSAR-QDLECDKISLERQNKDLKTRLASSEGFQ 1041
Cdd:PRK03918 410 ITARIGELKKEIKELKKAIEELKKAKGKcpvcGRELTEEHRKELLEEYTAElKRIEKELKEIEEKERKLRKELRELEKVL 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1042 KPSASLSQLESQNQLLQE------------------------------------------RLQAEEREKTVLQSTNRKLE 1079
Cdd:PRK03918 490 KKESELIKLKELAEQLKEleeklkkynleelekkaeeyeklkekliklkgeikslkkeleKLEELKKKLAELEKKLDELE 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1080 RKVKELSIQIEDERqhvNDQKDQLSLRVKALKRQVDE------AEEEIERLDGLRKKAQREVEEQHEVNEQLQARIKSLE 1153
Cdd:PRK03918 570 EELAELLKELEELG---FESVEELEERLKELEPFYNEylelkdAEKELEREEKELKKLEEELDKAFEELAETEKRLEELR 646
|
.
gi 16262452 1154 K 1154
Cdd:PRK03918 647 K 647
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
698-1086 |
2.23e-09 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 62.28 E-value: 2.23e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 698 EEASKAKMVAEAEAtvLGQRRAAVETtlrETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEarlrdklqRLEAEKQQL 777
Cdd:COG3096 304 EQYRLVEMARELEE--LSARESDLEQ---DYQAASDHLNLVQTALRQQEKIERYQEDLEELTE--------RLEEQEEVV 370
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 778 EEAlnasQEEEGSLAAAKRALEARLEEAQRGLARLGQ---EQQTlnRALEeegkQREVLRRgkaeLEEQKRLLdrtvdrl 854
Cdd:COG3096 371 EEA----AEQLAEAEARLEAAEEEVDSLKSQLADYQQaldVQQT--RAIQ----YQQAVQA----LEKARALC------- 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 855 nkELEKIGEDSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARL 934
Cdd:COG3096 430 --GLPDLTPENAEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKIAGEVERSQAWQTARELLRRYRSQ 507
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 935 dkELLAQRLQGLEQ---EAENKKRSQDDRARQLKGLEEKVSR-------LETELDEEKNTVELLTDRVNRGRDQVDQLRT 1004
Cdd:COG3096 508 --QALAQRLQQLRAqlaELEQRLRQQQNAERLLEEFCQRIGQqldaaeeLEELLAELEAQLEELEEQAAEAVEQRSELRQ 585
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1005 ELMQERSARQDLEcDKISLERQNKDLKTRLASSEGfqKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERKVKE 1084
Cdd:COG3096 586 QLEQLRARIKELA-ARAPAWLAAQDALERLREQSG--EALADSQEVTAAMQQLLEREREATVERDELAARKQALESQIER 662
|
..
gi 16262452 1085 LS 1086
Cdd:COG3096 663 LS 664
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
758-1168 |
2.53e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 61.59 E-value: 2.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 758 AVEARLRDKLQRLEAEKQQLEEalnasqEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTlnrALEEEGKQREVLRRGK 837
Cdd:PRK02224 177 GVERVLSDQRGSLDQLKAQIEE------KEEKDLHERLNGLESELAELDEEIERYEEQREQ---ARETRDEADEVLEEHE 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 838 AELEEqkrlldrtVDRLNKELEKIGEDskqalqqlQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQR 917
Cdd:PRK02224 248 ERREE--------LETLEAEIEDLRET--------IAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEA 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 918 LRQALQASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLETELDEEKNTVELLTDRVNRGRD 997
Cdd:PRK02224 312 VEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEE 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 998 QVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEgfqkpsASLSQLE---SQNQLLQERLQAEEREKTVLQST 1074
Cdd:PRK02224 392 EIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELE------ATLRTARervEEAEALLEAGKCPECGQPVEGSP 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1075 NRKLERKVKELSIQIEDERQHVNDQKDQLSLRVKALKRQVdEAEEEIERLDGLRKKAQREVEEQHEVNEQLQARIKSL-- 1152
Cdd:PRK02224 466 HVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLV-EAEDRIERLEERREDLEELIAERRETIEEKRERAEELre 544
|
410 420
....*....|....*....|...
gi 16262452 1153 -------EKDSWRKASRSAAESA 1168
Cdd:PRK02224 545 raaeleaEAEEKREAAAEAEEEA 567
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
725-1171 |
3.61e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 61.23 E-value: 3.61e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 725 LRETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQRLEAEKQQLEEALNASQEEEGSLAAAKR--ALEARL 802
Cdd:PRK03918 240 IEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREieKRLSRL 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 803 EEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRtVDRLNKELEKIGEDSKQALQQLQAQLEDYKEK 882
Cdd:PRK03918 320 EEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEE-AKAKKEELERLKKRLTGLTPEKLEKELEELEK 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 883 ARREVADAQRQAKDWASEAEKTSGglsRLQDEIQRLRQA------------------------LQASQAERDTARLDKEL 938
Cdd:PRK03918 399 AKEEIEEEISKITARIGELKKEIK---ELKKAIEELKKAkgkcpvcgrelteehrkelleeytAELKRIEKELKEIEEKE 475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 939 --LAQRLQGLEQEAENKKR--SQDDRARQLKGLEEKVSRLETE-LDEEKNTVELLTDRVNRGRDQVDQLRTELMQErsar 1013
Cdd:PRK03918 476 rkLRKELRELEKVLKKESEliKLKELAEQLKELEEKLKKYNLEeLEKKAEEYEKLKEKLIKLKGEIKSLKKELEKL---- 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1014 QDLECDKISLERQNKDLKTRLASSEGfQKPSASLSQLESQNQLLQErLQAEEREKTVLQSTNRKLERKVKELSI------ 1087
Cdd:PRK03918 552 EELKKKLAELEKKLDELEEELAELLK-ELEELGFESVEELEERLKE-LEPFYNEYLELKDAEKELEREEKELKKleeeld 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1088 QIEDERQHVNDQKDQLSLRVKALKRQVDEAEEE--IERLDGLRKKAQREVEEQHEVNEQLQARIKSLEKDSWRKASRSAA 1165
Cdd:PRK03918 630 KAFEELAETEKRLEELRKELEELEKKYSEEEYEelREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKA 709
|
....*.
gi 16262452 1166 ESALKN 1171
Cdd:PRK03918 710 KKELEK 715
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
744-1155 |
4.32e-09 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 60.55 E-value: 4.32e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 744 QQLKETRGLVDGGEAVEAR---LRDKLQRLEAEKQQLEEALNASQEEEGSLAAAKRALE--ARLEEAQRGLARLGQEQQT 818
Cdd:COG4717 71 KELKELEEELKEAEEKEEEyaeLQEELEELEEELEELEAELEELREELEKLEKLLQLLPlyQELEALEAELAELPERLEE 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 819 LNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNKELEKIGEDSKQALQQLQAQLEDYKE---KARREVADAQRQAK 895
Cdd:COG4717 151 LEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEeleEAQEELEELEEELE 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 896 DWASEAEktsggLSRLQDEIQRLRQ---------ALQASQAERDTARLDKELLAQRLQGL----------EQEAENKKRS 956
Cdd:COG4717 231 QLENELE-----AAALEERLKEARLllliaaallALLGLGGSLLSLILTIAGVLFLVLGLlallflllarEKASLGKEAE 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 957 QDDRARQLKGLEEKvsRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLAS 1036
Cdd:COG4717 306 ELQALPALEELEEE--ELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLAEAGVED 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1037 SEGFQkpsASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERKVKElsiQIEDERQHVNDQKDQLSLRVKALKRQVDE 1116
Cdd:COG4717 384 EEELR---AALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEE---ELEEELEELEEELEELEEELEELREELAE 457
|
410 420 430
....*....|....*....|....*....|....*....
gi 16262452 1117 AEEEIERLdglrkKAQREVEEQHEVNEQLQARIKSLEKD 1155
Cdd:COG4717 458 LEAELEQL-----EEDGELAELLQELEELKAELRELAEE 491
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
356-982 |
5.34e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 60.46 E-value: 5.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 356 KAVAGQGELTRKVEELQRKLDE---EVKKRQKLEPSQVGLERQLEEKTEECSRLQELLERRKGEAQQSNKELQNMKRLLD 432
Cdd:PRK03918 183 KFIKRTENIEELIKEKEKELEEvlrEINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIR 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 433 QGEDLRHGLETQVMELQNKLKHVQGPEPAKEVLLKdlleTRELLEEVLEGKQRVEEQLRLRERELTALKGALK--EEVAS 510
Cdd:PRK03918 263 ELEERIEELKKEIEELEEKVKELKELKEKAEEYIK----LSEFYEEYLDELREIEKRLSRLEEEINGIEERIKelEEKEE 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 511 RDQEVEHVRQQYQRDTEQLRrsmqdatQDHAVLEAERQKMSALVRGLQRELEETSEETGHWQSMFQKNKEDLRATKQELL 590
Cdd:PRK03918 339 RLEELKKKLKELEKRLEELE-------ERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKIT 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 591 QLRMEKEEMEEELGEKIEVLQ----------REL---EQARASAGDTRQVEVLKKELLRTQEELKELQAERQSQEVAgrh 657
Cdd:PRK03918 412 ARIGELKKEIKELKKAIEELKkakgkcpvcgRELteeHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKV--- 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 658 rdRELEKQLAVLRVEADRGRELEEqnlqlqktlQQLRQDCEEASKAKmvaeaeatvlgqrraaveTTLRETQEENDEFRR 737
Cdd:PRK03918 489 --LKKESELIKLKELAEQLKELEE---------KLKKYNLEELEKKA------------------EEYEKLKEKLIKLKG 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 738 RILGLEQQLKETRGLVDGGEAVEARLRDKLQRLEAEKQQLEEALNASQEEegslaaakraLEARLEEAqrglarlgqeQQ 817
Cdd:PRK03918 540 EIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEE----------LEERLKEL----------EP 599
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 818 TLNRALEEEGKQREvLRRGKAELEEQKRLLDRTVDRLNKELEKIGEDSKQALQQLQAQLEDYKEKARREVADAQRQAKDW 897
Cdd:PRK03918 600 FYNEYLELKDAEKE-LEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELREEYLELSRELAGL 678
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 898 ASEAEktsgGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAEN-KKRSQDDRARQLKGLEEKVSRLET 976
Cdd:PRK03918 679 RAELE----ELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKvKKYKALLKERALSKVGEIASEIFE 754
|
....*.
gi 16262452 977 ELDEEK 982
Cdd:PRK03918 755 ELTEGK 760
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
407-1154 |
7.89e-09 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 60.45 E-value: 7.89e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 407 QELLERRKGEAQQSNKELQNMKRLLDQGEDLRHGLETQVMELQNKLKHVQGPEPAKEVLLKDLLETRELLEEVLEGKQRV 486
Cdd:TIGR00606 188 LETLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKL 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 487 EEqlrlrerELTALKGALKEEVASRDQEVEHVRQQYQRDTEQLR-------RSMQDATQDHAVLEAERQKMSALVRGLQR 559
Cdd:TIGR00606 268 DN-------EIKALKSRKKQMEKDNSELELKMEKVFQGTDEQLNdlyhnhqRTVREKERELVDCQRELEKLNKERRLLNQ 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 560 ELEETSEETGHWQSMFQKNKEDLRATKQELLQLRMEKEEMEEELGEKIEV-------LQRELEQARASAGDTRQVEVLKK 632
Cdd:TIGR00606 341 EKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERqiknfhtLVIERQEDEAKTAAQLCADLQSK 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 633 ELLRtQEELKELQAERQSQEVAGRHRDRELEKQLAVLRVEADRGRELEEQNLQLQKTLQQLRQDCEEASKAKMVA----- 707
Cdd:TIGR00606 421 ERLK-QEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELSKAEKNSltetl 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 708 EAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEAV---EARLRDKLQRLEAE---KQQLEEAL 781
Cdd:TIGR00606 500 KKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIrkiKSRHSDELTSLLGYfpnKKQLEDWL 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 782 NASQEEegslaaaKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLlDRTVDRLNKELEKI 861
Cdd:TIGR00606 580 HSKSKE-------INQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDE-ESDLERLKEEIEKS 651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 862 GEDSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAE------KTSGGLSRLQDEIQRLRQALQASQAERDTARLD 935
Cdd:TIGR00606 652 SKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAElqefisDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGL 731
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 936 KELLAQRLQGLEQEA----ENKKRSQDDRARQLKGLEEKVSRLETELDEEKNTVELLTDR--VNRGRDQVDQLRTELMQE 1009
Cdd:TIGR00606 732 APGRQSIIDLKEKEIpelrNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVtiMERFQMELKDVERKIAQQ 811
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1010 RSARQ----DLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLEsQNQLLQERLQAEEREKTVLQST---NRKLERKV 1082
Cdd:TIGR00606 812 AAKLQgsdlDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQE-QIQHLKSKTNELKSEKLQIGTNlqrRQQFEEQL 890
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 16262452 1083 KELSIQIEDERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQREVEEQHEVNEQLQARIKSLEK 1154
Cdd:TIGR00606 891 VELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIEN 962
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
527-1124 |
1.56e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 59.16 E-value: 1.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 527 EQLRRSMQDATQDHAVLEAERQKMSAL--VRGLQRELEETSEETGHWQSM-----FQKNKEDLRATKQELLQLRMEKEEM 599
Cdd:COG4913 228 DALVEHFDDLERAHEALEDAREQIELLepIRELAERYAAARERLAELEYLraalrLWFAQRRLELLEAELEELRAELARL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 600 EEELGEKIEVLQ------RELEQARASAGdTRQVEVLKKELLRTQEELKELQAERQsqevagrhrdrELEKQLAVLRVEA 673
Cdd:COG4913 308 EAELERLEARLDalreelDELEAQIRGNG-GDRLEQLEREIERLERELEERERRRA-----------RLEALLAALGLPL 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 674 DRGRE-LEEQNLQLQKTLqqlrqdcEEASKAKMVAEAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKETRgl 752
Cdd:COG4913 376 PASAEeFAALRAEAAALL-------EALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALR-- 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 753 vdggeaveARLRDKLQRLEAEKQQLEEALNASQEEEGSLAAAKRALearleeaqRGLA-RLGQEQQTLNRALE--EEGKQ 829
Cdd:COG4913 447 --------DALAEALGLDEAELPFVGELIEVRPEEERWRGAIERVL--------GGFAlTLLVPPEHYAAALRwvNRLHL 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 830 REVLR----RGKAELEEQKRLLDRTV------------DRLNKELEKIG-----EDSKQALQQLQAQLED---YKEKARR 885
Cdd:COG4913 511 RGRLVyervRTGLPDPERPRLDPDSLagkldfkphpfrAWLEAELGRRFdyvcvDSPEELRRHPRAITRAgqvKGNGTRH 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 886 EVADAQRQAKDW---ASEAEKtsggLSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAEnkkrsQDDRAR 962
Cdd:COG4913 591 EKDDRRRIRSRYvlgFDNRAK----LAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAE-----YSWDEI 661
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 963 QLKGLEEKVSRLETELdeekntvelltDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLAssegfqk 1042
Cdd:COG4913 662 DVASAEREIAELEAEL-----------ERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELE------- 723
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1043 psaslsQLESQNQLLQERLQAEEREKTVLQSTNrkLERKVKELsiqieDERQHVNDQKDQLSLRVKALKRQVDEAEEEIE 1122
Cdd:COG4913 724 ------QAEEELDELQDRLEAAEDLARLELRAL--LEERFAAA-----LGDAVERELRENLEERIDALRARLNRAEEELE 790
|
..
gi 16262452 1123 RL 1124
Cdd:COG4913 791 RA 792
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
743-1154 |
2.61e-08 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 58.65 E-value: 2.61e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 743 EQQLKETRGLVDGGEAVEARLRDKLQRLEAEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRA 822
Cdd:pfam01576 172 EEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALAR 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 823 LEEEGKQREVLRRGKAELEEQkrlldrtvdrlNKELEKIGEDSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAE 902
Cdd:pfam01576 252 LEEETAQKNNALKKIRELEAQ-----------ISELQEDLESERAARNKAEKQRRDLGEELEALKTELEDTLDTTAAQQE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 903 KTsgglSRLQDEIQRLRQALQASQAERDTARLD-KELLAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLETELDEE 981
Cdd:pfam01576 321 LR----SKREQEVTELKKALEEETRSHEAQLQEmRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTL 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 982 KNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEG-FQKPSASLSQLESQNQLLQER 1060
Cdd:pfam01576 397 QQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGkNIKLSKDVSSLESQLQDTQEL 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1061 LQAEEREKTVLQSTNRKLERKVKELSIQIEDE---RQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQREVEE 1137
Cdd:pfam01576 477 LQEETRQKLNLSTRLRQLEDERNSLQEQLEEEeeaKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEA 556
|
410
....*....|....*..
gi 16262452 1138 QHEVNEQLQARIKSLEK 1154
Cdd:pfam01576 557 LTQQLEEKAAAYDKLEK 573
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
901-1153 |
4.32e-08 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 57.72 E-value: 4.32e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 901 AEKTSGGLSRLQDEIQRLRQALQASQAERD-------TARlDKELLAQRLQGLEQE--AENKKRSQDDRARQLKGLEEKV 971
Cdd:COG3206 106 DEDPLGEEASREAAIERLRKNLTVEPVKGSnvieisyTSP-DPELAAAVANALAEAylEQNLELRREEARKALEFLEEQL 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 972 SRLETELDE---------EKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQ---NKDLKTRLASSEG 1039
Cdd:COG3206 185 PELRKELEEaeaaleefrQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQlgsGPDALPELLQSPV 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1040 FQKPSASLSQLESQNQLLQERLQAEEREktvLQSTNRKLERKVKELSIQIEDERQHVNDQKDQLSLRVKALKRQVDEAEE 1119
Cdd:COG3206 265 IQQLRAQLAELEAELAELSARYTPNHPD---VIALRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEA 341
|
250 260 270
....*....|....*....|....*....|....*..
gi 16262452 1120 EIERLDGLRKKA---QREVEEQHEVNEQLQARIKSLE 1153
Cdd:COG3206 342 RLAELPELEAELrrlEREVEVARELYESLLQRLEEAR 378
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
719-934 |
1.64e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 55.16 E-value: 1.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 719 AAVETTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQRLEAEKQQLEEALNASQEEEGSLAAAKRAL 798
Cdd:COG4942 16 AAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 799 EARLEEAQRGLARLGQEQQTLNRA-------------------------LEEEGKQREVLRRGKAELEEQKRLLDRTVDR 853
Cdd:COG4942 96 RAELEAQKEELAELLRALYRLGRQpplalllspedfldavrrlqylkylAPARREQAEELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 854 LNKELEKIgEDSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTAR 933
Cdd:COG4942 176 LEALLAEL-EEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKGK 254
|
.
gi 16262452 934 L 934
Cdd:COG4942 255 L 255
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
559-1133 |
1.93e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 55.46 E-value: 1.93e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 559 RELEETSEETGHWQSMFQKNKEDLRATKQELLQLRMEKEEMEEElgekIEVLQRELEQARASAGDTRQVEVLKKELLRTQ 638
Cdd:PRK03918 179 ERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREE----LEKLEKEVKELEELKEEIEELEKELESLEGSK 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 639 EELKELQAERQSqevagrhRDRELEKQLAVLRVEADRGRELEEQNLQLQKTLQQLrqdcEEASKAKMVAEAEATVLGQRR 718
Cdd:PRK03918 255 RKLEEKIRELEE-------RIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFY----EEYLDELREIEKRLSRLEEEI 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 719 AAVETTLRETQEEN---DEFRRRILGLEQQLKETRGLVDGGEAVEArLRDKLQRLEAEKQQLE-EALNASQEEegsLAAA 794
Cdd:PRK03918 324 NGIEERIKELEEKEerlEELKKKLKELEKRLEELEERHELYEEAKA-KKEELERLKKRLTGLTpEKLEKELEE---LEKA 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 795 KRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLldRTVDRLNKELEKIgedskqalqqlqa 874
Cdd:PRK03918 400 KEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRK--ELLEEYTAELKRI------------- 464
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 875 qledykEKARREVADAQRQAKDWASEAEKTSGGLSRLQ------DEIQRLRQALQASQAERDTARLDK-ELLAQRLQGLE 947
Cdd:PRK03918 465 ------EKELKEIEEKERKLRKELRELEKVLKKESELIklkelaEQLKELEEKLKKYNLEELEKKAEEyEKLKEKLIKLK 538
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 948 QEAENKKrsqdDRARQLKGLEEKVSRLETELDE-EKNTVELLTDRVNRGRDQVDQLRTELMQERSARQ------DLECDK 1020
Cdd:PRK03918 539 GEIKSLK----KELEKLEELKKKLAELEKKLDElEEELAELLKELEELGFESVEELEERLKELEPFYNeylelkDAEKEL 614
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1021 ISLERQNKDLKTRL-ASSEGFQKPSASLSQLESQNQLLQERLQAEEREKtvLQSTNRKLERKVKELSIQIEDERQHVNDQ 1099
Cdd:PRK03918 615 EREEKELKKLEEELdKAFEELAETEKRLEELRKELEELEKKYSEEEYEE--LREEYLELSRELAGLRAELEELEKRREEI 692
|
570 580 590
....*....|....*....|....*....|....
gi 16262452 1100 KDQLSlRVKALKRQVDEAEEEIERLDGLRKKAQR 1133
Cdd:PRK03918 693 KKTLE-KLKEELEEREKAKKELEKLEKALERVEE 725
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
791-1012 |
2.00e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.77 E-value: 2.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 791 LAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNKELEKIGE---DSKQ 867
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAelaELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 868 ALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLE 947
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 16262452 948 QEAENKKRSQDDRARQLKGLE-------EKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSA 1012
Cdd:COG4942 171 AERAELEALLAELEEERAALEalkaerqKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
747-1168 |
4.37e-07 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 54.58 E-value: 4.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 747 KETRGLVDGGEAVEARLRDKLQRLEAEKQQLEE---ALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQ------ 817
Cdd:PRK04863 279 NERRVHLEEALELRRELYTSRRQLAAEQYRLVEmarELAELNEAESDLEQDYQAASDHLNLVQTALRQQEKIERyqadle 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 818 TLNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNKELEkigedskqalqqlqaqleDYKEK--ARREVADAQRQAK 895
Cdd:PRK04863 359 ELEERLEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLA------------------DYQQAldVQQTRAIQYQQAV 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 896 DWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDkelLAQRLQgLEQEAenkkRSQDDRARQL-KGLEEKVSRL 974
Cdd:PRK04863 421 QALERAKQLCGLPDLTADNAEDWLEEFQAKEQEATEELLS---LEQKLS-VAQAA----HSQFEQAYQLvRKIAGEVSRS 492
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 975 E-----TELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQdlecdkiSLERQNKDLKTRLASSEGFQkpsaslsQ 1049
Cdd:PRK04863 493 EawdvaRELLRRLREQRHLAEQLQQLRMRLSELEQRLRQQQRAER-------LLAEFCKRLGKNLDDEDELE-------Q 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1050 LESQNQLLQERLQAEEREKTVLQSTnrkLERKVKELSIQIEDERQHVnDQKDQLSLRVKALKRQVDEAEEEIERLDGLRK 1129
Cdd:PRK04863 559 LQEELEARLESLSESVSEARERRMA---LRQQLEQLQARIQRLAARA-PAWLAAQDALARLREQSGEEFEDSQDVTEYMQ 634
|
410 420 430
....*....|....*....|....*....|....*....
gi 16262452 1130 KAQREVEEQHEVNEQLQARIKSLEKDSWRKASRSAAESA 1168
Cdd:PRK04863 635 QLLERERELTVERDELAARKQALDEEIERLSQPGGSEDP 673
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
521-1153 |
6.64e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 53.97 E-value: 6.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 521 QYQRDTEQLRRSMQDATQDHavLEAERQKMSALVRGLQRELEETSEetghwqsMFQKNKEDLRatkQELLQLRMEKeeme 600
Cdd:pfam15921 56 KYEVELDSPRKIIAYPGKEH--IERVLEEYSHQVKDLQRRLNESNE-------LHEKQKFYLR---QSVIDLQTKL---- 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 601 eelgekievlqRELEQARASAGDTRQVEVLKKELLRTQEE--LKELQAERQSQEVAGRHRDRELEKQLAVLRVEADRGRE 678
Cdd:pfam15921 120 -----------QEMQMERDAMADIRRRESQSQEDLRNQLQntVHELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQE 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 679 LeeqnlqlqktlQQLRQDCEEASKAKMVAEAEATVLGQRR--AAVETTLRETQEENDEFRRRILGLEQQLketrglvdgg 756
Cdd:pfam15921 189 I-----------RSILVDFEEASGKKIYEHDSMSTMHFRSlgSAISKILRELDTEISYLKGRIFPVEDQL---------- 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 757 EAVEARLRDKLQRLEAEKQQLEEALNASQEEEgslaaakraLEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRG 836
Cdd:pfam15921 248 EALKSESQNKIELLLQQHQDRIEQLISEHEVE---------ITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQ 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 837 KAELEEqkrlldrTVDRLNKELEKigedskqalqqLQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQ 916
Cdd:pfam15921 319 LSDLES-------TVSQLRSELRE-----------AKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQ 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 917 RLRQALQASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLETE----LDEEKNTVELLTDRV 992
Cdd:pfam15921 381 KLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSEcqgqMERQMAAIQGKNESL 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 993 NRGRDQVDQLRTELMQERSARQDLECDKISL---ERQNKDLKTRLASSE-GFQKPSASLSQLESQNQLLQERLQAEEREK 1068
Cdd:pfam15921 461 EKVSSLTAQLESTKEMLRKVVEELTAKKMTLessERTVSDLTASLQEKErAIEATNAEITKLRSRVDLKLQELQHLKNEG 540
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1069 TVLQSTNRKLE----------RKVKELSIQIEDERQHVNDQ---KDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQREV 1135
Cdd:pfam15921 541 DHLRNVQTECEalklqmaekdKVIEILRQQIENMTQLVGQHgrtAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKI 620
|
650
....*....|....*...
gi 16262452 1136 EEqhevneqLQARIKSLE 1153
Cdd:pfam15921 621 RE-------LEARVSDLE 631
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
638-1085 |
9.66e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 53.23 E-value: 9.66e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 638 QEELKELQAERQSQEVAGRHRDRELEKQLAVLRVEADRGRELEEQNLQLQKTLqqlrqdcEEASKAKMVAEAEATVLGQR 717
Cdd:COG4717 52 EKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEEL-------EELEAELEELREELEKLEKL 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 718 RAAVET--TLRETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQRLEAEKQQL----EEALNASQEEEGSL 791
Cdd:COG4717 125 LQLLPLyqELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLslatEEELQDLAEELEEL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 792 AAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLR-RGKAELEEQKRLLDRTVDRLNKELEKIGE------- 863
Cdd:COG4717 205 QQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEaRLLLLIAAALLALLGLGGSLLSLILTIAGvlflvlg 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 864 ---DSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEK----TSGGLSRLQDEIQRLRQALQA-SQAERDTARLD 935
Cdd:COG4717 285 llaLLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAAlglpPDLSPEELLELLDRIEELQELlREAEELEEELQ 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 936 KELLAQRLQGLEQEA----ENKKRSQDDRARQLKGLEEKVSRLETELDEEKNTVELLTDRVNRgrdqvDQLRTELMQERS 1011
Cdd:COG4717 365 LEELEQEIAALLAEAgvedEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDE-----EELEEELEELEE 439
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 16262452 1012 ARQDLECDKISLERQNKDLKTRLASSEGfqkpSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERKVKEL 1085
Cdd:COG4717 440 ELEELEEELEELREELAELEAELEQLEE----DGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEY 509
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
768-1170 |
1.05e-06 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 52.38 E-value: 1.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 768 QRLEAEKQQLEEAlNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLL 847
Cdd:pfam19220 3 QRNELLRVRLGEM-ADRLEDLRSLKADFSQLIEPIEAILRELPQAKSRLLELEALLAQERAAYGKLRRELAGLTRRLSAA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 848 DRTVDRLNKELEKIGEDSKQALQQLQAQLEDYKEKARReVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQA 927
Cdd:pfam19220 82 EGELEELVARLAKLEAALREAEAAKEELRIELRDKTAQ-AEALERQLAAETEQNRALEEENKALREEAQAAEKALQRAEG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 928 ERDTARldkellaQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLETELDEEkntvelltdrvnrgRDQVDQLRTELM 1007
Cdd:pfam19220 161 ELATAR-------ERLALLEQENRRLQALSEEQAAELAELTRRLAELETQLDAT--------------RARLRALEGQLA 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1008 QERSARQDLECdkiSLERQNKDLKTRLASS----EGFQKPSASLSQL--ESQNQL--LQERLQAEEREKTVLQSTNRKLE 1079
Cdd:pfam19220 220 AEQAERERAEA---QLEEAVEAHRAERASLrmklEALTARAAATEQLlaEARNQLrdRDEAIRAAERRLKEASIERDTLE 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1080 RKVKELSIQIEDERQHVND---QKDQLSLRVKALKR-------QVDEAEEEIERLDGLRKKAQREVEEQHEVNEQLQARI 1149
Cdd:pfam19220 297 RRLAGLEADLERRTQQFQEmqrARAELEERAEMLTKalaakdaALERAEERIASLSDRIAELTKRFEVERAALEQANRRL 376
|
410 420
....*....|....*....|..
gi 16262452 1150 KS-LEKDswrKASRSAAESALK 1170
Cdd:pfam19220 377 KEeLQRE---RAERALAQGALE 395
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
941-1154 |
2.09e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 52.22 E-value: 2.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 941 QRLQGLEQEAENKKRsqddRARQLKGLEEKVSRLEtELDEEKNTVELLTDRVN--RGRDQVDQLRTELMQERSARQDLEC 1018
Cdd:COG4913 235 DDLERAHEALEDARE----QIELLEPIRELAERYA-AARERLAELEYLRAALRlwFAQRRLELLEAELEELRAELARLEA 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1019 DKISLERQNKDLKTRLASSEGfQKPSASLSQLESqnqlLQERLQAEEREKTVLQSTNRKLERKVKELSIQIEDERQHVND 1098
Cdd:COG4913 310 ELERLEARLDALREELDELEA-QIRGNGGDRLEQ----LEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAA 384
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 16262452 1099 QKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQREVEEqhevneqLQARIKSLEK 1154
Cdd:COG4913 385 LRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRE-------LEAEIASLER 433
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
764-1038 |
2.50e-06 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 52.26 E-value: 2.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 764 RDKLQRLEAE-----KQQLEEALNASQEEEGSLAAAKRA-LEARLEEAQRGLARLGQ-------EQQTLNRAL------- 823
Cdd:COG3096 808 VQKLQRLHQAfsqfvGGHLAVAFAPDPEAELAALRQRRSeLERELAQHRAQEQQLRQqldqlkeQLQLLNKLLpqanlla 887
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 824 -EEEGKQREVLRRGKAELEEQKRLLDRTVDRLnKELEKIGEDSKQALQQLQAQLEDYKE-KARREVADAQRQAKDWASEA 901
Cdd:COG3096 888 dETLADRLEELREELDAAQEAQAFIQQHGKAL-AQLEPLVAVLQSDPEQFEQLQADYLQaKEQQRRLKQQIFALSEVVQR 966
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 902 ------EKTSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLE 975
Cdd:COG3096 967 rphfsyEDAVGLLGENSDLNEKLRARLEQAEEARREAREQLRQAQAQYSQYNQVLASLKSSRDAKQQTLQELEQELEELG 1046
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16262452 976 TELDeekntvellTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSE 1038
Cdd:COG3096 1047 VQAD---------AEAEERARIRRDELHEELSQNRSRRSQLEKQLTRCEAEMDSLQKRLRKAE 1100
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
365-990 |
2.56e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 51.89 E-value: 2.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 365 TRKVEELQRKLDEEVKKRQKLEPSQVGLERQLEEKTEECSRLQELLERR-------------------KGEAQQSNKELQ 425
Cdd:TIGR00618 238 TQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERInrarkaaplaahikavtqiEQQAQRIHTELQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 426 NMKRLLDQGEDLRHGLETQVMELQNKLKHVQGPEpAKEVLLKDLLETRELLEEVLEGKQRVEEQLRLRERELTALKGALK 505
Cdd:TIGR00618 318 SKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLH-SQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQ 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 506 EEVASRDQEVEHVRQQYQRDTEQlRRSMQDATQDHAVLEAERQKMSALVRGLQRELEETSEETGHWQSMFQKnkedLRAT 585
Cdd:TIGR00618 397 SLCKELDILQREQATIDTRTSAF-RDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQS----LKER 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 586 KQELLQLRMEKEEMEEELGEKIEVLQRELEQARASAGDTRQVEVLKKELLrtqeELKELQAERQSQEVAGRHRDRELEKQ 665
Cdd:TIGR00618 472 EQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDID----NPGPLTRRMQRGEQTYAQLETSEEDV 547
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 666 LAVLRVEADRGRELEEQNLQLQKTLQQLRQdCEEASKAKMVAEAEATVLgqrraavettLRETQEENDEFRRRILGLEQQ 745
Cdd:TIGR00618 548 YHQLTSERKQRASLKEQMQEIQQSFSILTQ-CDNRSKEDIPNLQNITVR----------LQDLTEKLSEAEDMLACEQHA 616
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 746 LKETRGLVDGGEAVEARLRDKLQRLEAEKQQLE-EALNASQEEEGSLAAAKRALEAR--------LEEAQRGLARLGQEQ 816
Cdd:TIGR00618 617 LLRKLQPEQDLQDVRLHLQQCSQELALKLTALHaLQLTLTQERVREHALSIRVLPKEllasrqlaLQKMQSEKEQLTYWK 696
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 817 QTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNKEL----EKIGEDSKQALQQLQAQLEDYKEKARREVADAQR 892
Cdd:TIGR00618 697 EMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREdalnQSLKELMHQARTVLKARTEAHFNNNEEVTAALQT 776
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 893 QAKDwaSEAEKTSGGLSRLQDEIQRLRQALQASQAER-----DTARLDKELLAQRLQGLEQEAENKKRSQDDRARQLKGL 967
Cdd:TIGR00618 777 GAEL--SHLAAEIQFFNRLREEDTHLLKTLEAEIGQEipsdeDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKY 854
|
650 660
....*....|....*....|...
gi 16262452 968 EEKVSRLETELDEEKNTVELLTD 990
Cdd:TIGR00618 855 EECSKQLAQLTQEQAKIIQLSDK 877
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
880-1163 |
2.59e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.99 E-value: 2.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 880 KEKARREVADAQRQakdwaseaektsggLSRLQDEIQRLRQALQASQAERDTARLDKELLAqRLQglEQEAENKKRSQDD 959
Cdd:TIGR02169 172 KEKALEELEEVEEN--------------IERLDLIIDEKRQQLERLRREREKAERYQALLK-EKR--EYEGYELLKEKEA 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 960 RARQLKGLEEKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQdlecdkislerqnKDLKTRLASSEg 1039
Cdd:TIGR02169 235 LERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQ-------------LRVKEKIGELE- 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1040 fqkpsASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERKVKELSIQIEDERQhvndQKDQLSLRVKALKRQVDEAEE 1119
Cdd:TIGR02169 301 -----AEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERK----RRDKLTEEYAELKEELEDLRA 371
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 16262452 1120 EIERLDGLRKKAQREVEEQHEVNEQLQARIKSLEKDSWRKASRS 1163
Cdd:TIGR02169 372 ELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEEL 415
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
484-1142 |
3.62e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 51.51 E-value: 3.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 484 QRVEEQLRLRERELTALKGALKEEVAS-----RDQEVEHVRQQYQRDTEQLRRSMQDATQDHAVLEAERQKmsalvRGLQ 558
Cdd:TIGR00618 215 DTYHERKQVLEKELKHLREALQQTQQShayltQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQER-----INRA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 559 RELEETSEETGHWQSMFQKNKEDLRAtkqelLQLRMEKEEMEEELGEKIEVLQRELEQARASAGDTRQVEvlkkELLRTQ 638
Cdd:TIGR00618 290 RKAAPLAAHIKAVTQIEQQAQRIHTE-----LQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQE----IHIRDA 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 639 EELKELQAERQSQEVAGRHRDRELEKQLAVL----RVEADRGRELEEQNLQLQKTLQQLRQDCEEASKAKMVAEAEATVL 714
Cdd:TIGR00618 361 HEVATSIREISCQQHTLTQHIHTLQQQKTTLtqklQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYA 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 715 GQRRAAVETTLRETQEEN---DEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQRLEAEKQQLEEALnASQEEEGSL 791
Cdd:TIGR00618 441 ELCAAAITCTAQCEKLEKihlQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSC-IHPNPARQD 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 792 AAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNKELEKIgeDSKQALQQ 871
Cdd:TIGR00618 520 IDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNL--QNITVRLQ 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 872 LQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERD---------TARLDKELLAQR 942
Cdd:TIGR00618 598 DLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTqervrehalSIRVLPKELLAS 677
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 943 LQGLEQEAENKKRSQDDRARQLKGLEEKVSRLET---ELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECD 1019
Cdd:TIGR00618 678 RQLALQKMQSEKEQLTYWKEMLAQCQTLLRELEThieEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLK 757
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1020 KISLERQNKDLKTRLASSEGfQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERKVKELSIQIEDERQHVNDQ 1099
Cdd:TIGR00618 758 ARTEAHFNNNEEVTAALQTG-AELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSR 836
|
650 660 670 680
....*....|....*....|....*....|....*....|...
gi 16262452 1100 KDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQREVEEQHEVN 1142
Cdd:TIGR00618 837 LEEKSATLGEITHQLLKYEECSKQLAQLTQEQAKIIQLSDKLN 879
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
666-907 |
4.54e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.53 E-value: 4.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 666 LAVLRVEADRGRELEEQNLQLQKTLQQLRQDCEEASKAKMVAEAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQ 745
Cdd:COG4942 12 ALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 746 LKETRGLVDGGEAVEARLRDKLQRLEaekQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEE 825
Cdd:COG4942 92 IAELRAELEAQKEELAELLRALYRLG---RQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAE 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 826 EGKQREVLRRGKAELEEQKRLLDRTVDRLNKELEKIgedsKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEKTS 905
Cdd:COG4942 169 LEAERAELEALLAELEEERAALEALKAERQKLLARL----EKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
..
gi 16262452 906 GG 907
Cdd:COG4942 245 AA 246
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
616-845 |
6.55e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.76 E-value: 6.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 616 QARASAGDTRQVEVLKKELLRTQEELKELQAERQSQEVAGRHRDRELEKQLAVLRVEADRGRELEEQNLQLQKTLQQLRQ 695
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 696 DcEEASKAKMVAEAEATVLGQRRAAVETTLRetQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQRLEAEKQ 775
Cdd:COG4942 98 E-LEAQKEELAELLRALYRLGRQPPLALLLS--PEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 776 QLEEALNASQEEegslaaaKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKR 845
Cdd:COG4942 175 ELEALLAELEEE-------RAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
364-1008 |
7.08e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 50.35 E-value: 7.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 364 LTRKVEELQRKLDEEVKKRQKLEPSQVGLeRQLEEKTEECSRLQELLerrkGEAQQSNKELQNmkrlldqgedlrhglET 443
Cdd:TIGR00618 217 YHERKQVLEKELKHLREALQQTQQSHAYL-TQKREAQEEQLKKQQLL----KQLRARIEELRA---------------QE 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 444 QVMELQNKLKHVQgpePAKEVLLKDLLETRELLEEVLEGKQRVEEQLRLRERELTALKGALKEEvaSRDQEVEHVRQQYQ 523
Cdd:TIGR00618 277 AVLEETQERINRA---RKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQ--SSIEEQRRLLQTLH 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 524 RDTEQLRRSMQDATQDHAVLEAERQKMSALVRglQRELEETSEETGHWQSMFQKNKEDLRATKQELLQLRMEKEEMEEEL 603
Cdd:TIGR00618 352 SQEIHIRDAHEVATSIREISCQQHTLTQHIHT--LQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHA 429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 604 GEKIEVLQRELEQARASAGDTRQVEVLKK-ELLRTQEELKELQAERQSQEVAGRHRDRELEKQLAVLRVEADRGRELEEQ 682
Cdd:TIGR00618 430 KKQQELQQRYAELCAAAITCTAQCEKLEKiHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGS 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 683 NLQLQKTLQQLRQD-------CEEASKAKMVAEAEATVLGQRRAAVEtTLRETQEENDEFRRRILGLEQQLKETRGLVDG 755
Cdd:TIGR00618 510 CIHPNPARQDIDNPgpltrrmQRGEQTYAQLETSEEDVYHQLTSERK-QRASLKEQMQEIQQSFSILTQCDNRSKEDIPN 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 756 GEAVEARLRDKLQRLEAEKQQLEEALNAsQEEEGSLAAAKR--ALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVL 833
Cdd:TIGR00618 589 LQNITVRLQDLTEKLSEAEDMLACEQHA-LLRKLQPEQDLQdvRLHLQQCSQELALKLTALHALQLTLTQERVREHALSI 667
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 834 RRGKAELEEQKRLLDRTVDRLNKELEKIGEdSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGGLSRLQD 913
Cdd:TIGR00618 668 RVLPKELLASRQLALQKMQSEKEQLTYWKE-MLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLK 746
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 914 EIQRLR----QALQASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVsrlETELDEEKNTVELLT 989
Cdd:TIGR00618 747 ELMHQArtvlKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEI---GQEIPSDEDILNLQC 823
|
650
....*....|....*....
gi 16262452 990 DRVNRGRDQVDQLRTELMQ 1008
Cdd:TIGR00618 824 ETLVQEEEQFLSRLEEKSA 842
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
576-822 |
8.43e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 8.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 576 QKNKEDLRATKQELLQLRMEKEEMEEELGEKIEVLQRELEQARASAGDT-RQVEVLKKELLRTQEELKELQAERQsqeva 654
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALaRRIRALEQELAALEAELAELEKEIA----- 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 655 grhrdrELEKQLAVLRVE-ADRGRELEEQNLQLQKTLQQLRQDCEEASKAKMVAEAeatvLGQRRAAVETTLRETQEEND 733
Cdd:COG4942 94 ------ELRAELEAQKEElAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKY----LAPARREQAEELRADLAELA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 734 EFRRRILGLEQQLketrglvdggEAVEARLRDKLQRLEAEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLG 813
Cdd:COG4942 164 ALRAELEAERAEL----------EALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLE 233
|
....*....
gi 16262452 814 QEQQTLNRA 822
Cdd:COG4942 234 AEAAAAAER 242
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
838-1155 |
1.12e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 49.63 E-value: 1.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 838 AELEEQKRLLDRTVDRLNKELEKIGEDSKQ------ALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGGLSRL 911
Cdd:TIGR04523 127 NKLEKQKKENKKNIDKFLTEIKKKEKELEKlnnkynDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNL 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 912 QDEIQR---LRQALQASQAERDTARLDKELLAQRLQGLEQEAENKKRsqddrarQLKGLEEKVSRLETELDEEKNTVELL 988
Cdd:TIGR04523 207 KKKIQKnksLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQT-------QLNQLKDEQNKIKKQLSEKQKELEQN 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 989 TDRVNRGRDQVDQLRTELmqersarQDLECDKIslERQNKDLKTRLASSEgfQKPSASLSQLESQNQL---LQERLQAEE 1065
Cdd:TIGR04523 280 NKKIKELEKQLNQLKSEI-------SDLNNQKE--QDWNKELKSELKNQE--KKLEEIQNQISQNNKIisqLNEQISQLK 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1066 REKTVLQSTNRKLERKVKELSIQIED---ERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQRE---VEEQH 1139
Cdd:TIGR04523 349 KELTNSESENSEKQRELEEKQNEIEKlkkENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEkelLEKEI 428
|
330 340
....*....|....*....|
gi 16262452 1140 E----VNEQLQARIKSLEKD 1155
Cdd:TIGR04523 429 ErlkeTIIKNNSEIKDLTNQ 448
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
884-1155 |
1.44e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 49.35 E-value: 1.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 884 RREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERdtARLDKE---LLAQRLQGLEQEAENKKRSQDDR 960
Cdd:pfam17380 281 QKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQ--AEMDRQaaiYAEQERMAMERERELERIRQEER 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 961 ARQLKGLEEKVSRLETELDEEKNTVELLTDRVN-RGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKT------- 1032
Cdd:pfam17380 359 KRELERIRQEEIAMEISRMRELERLQMERQQKNeRVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEarqrevr 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1033 RLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERKVKE------LSIQIEDERQHVNDQKDQLSLR 1106
Cdd:pfam17380 439 RLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEeqrrkiLEKELEERKQAMIEEERKRKLL 518
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 16262452 1107 VKALK-RQVDEAEEEIERLDGLRKKAQREVEEQHEVNEQL------QARIKSLEKD 1155
Cdd:pfam17380 519 EKEMEeRQKAIYEEERRREAEEERRKQQEMEERRRIQEQMrkateeRSRLEAMERE 574
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1062-1154 |
2.13e-05 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 48.70 E-value: 2.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1062 QAEEREKTVLQSTNRKLERKVKELSIQIEDERQHVNDQKDQ---LSLRVKALKRQVDE---AEEEIERLDGLRKKAQREV 1135
Cdd:COG2433 402 EHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERierLERELSEARSEERReirKDREISRLDREIERLEREL 481
|
90
....*....|....*....
gi 16262452 1136 EEQHEVNEQLQARIKSLEK 1154
Cdd:COG2433 482 EEERERIEELKRKLERLKE 500
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
347-568 |
2.24e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.22 E-value: 2.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 347 LVMVSSGSTKAVAGQGELTRKVEELQRKLDEEVKKRQKLEPSQVGLERQLEEKTEECSRLQELLERRKGEAQQSNKELQN 426
Cdd:COG4942 8 ALLLALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 427 MKRLLDQGEDLRHGLETQVMEL---------QNKLKHVQGPEPAKEV-----LLKDLLETRELLEEVLEGKQRVEEQLRL 492
Cdd:COG4942 88 LEKEIAELRAELEAQKEELAELlralyrlgrQPPLALLLSPEDFLDAvrrlqYLKYLAPARREQAEELRADLAELAALRA 167
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16262452 493 RERELTALKGALKEEVASRDQEVEHVRQQYQRDTEQLRRSMQDATQDHAVLEAERQKMSALVRGLQRELEETSEET 568
Cdd:COG4942 168 ELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
441-1130 |
2.24e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 49.07 E-value: 2.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 441 LETQVMELQNKLKHVQGPEPAKEVLLKdlletrelleEVLEGKQRVEEQLRLRERELTALKGALKEEVASRDQEVEHVRQ 520
Cdd:pfam12128 253 LESAELRLSHLHFGYKSDETLIASRQE----------ERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRS 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 521 QYQRDTEQLRRSMQD----ATQDHAVLEAERQKMSALVRGLQRELEETSEETGHWQSMFQKNKEDLRATKQELLQLRMEK 596
Cdd:pfam12128 323 ELEALEDQHGAFLDAdietAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKI 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 597 EEMEEELGEKIEVLQRELEQARASAGDTRQVEvlkkelLRTQEELKELQAERQSQEVAGRHRDRELEKQLAVLRVEADRG 676
Cdd:pfam12128 403 REARDRQLAVAEDDLQALESELREQLEAGKLE------FNEEEYRLKSRLGELKLRLNQATATPELLLQLENFDERIERA 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 677 RELEEQNLQLQKTLQQLRQDC----EEASKAKMVAEAEATVLGQRRAAVETTLRETQEENDEFRR-----------RILG 741
Cdd:pfam12128 477 REEQEAANAEVERLQSELRQArkrrDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHFLRkeapdweqsigKVIS 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 742 LEQQLK-----ETRGLVDGGEAVEARLRDKLQRLEA-EKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGL-ARLGQ 814
Cdd:pfam12128 557 PELLHRtdldpEVWDGSVGGELNLYGVKLDLKRIDVpEWAASEEELRERLDKAEEALQSAREKQAAAEEQLVQAnGELEK 636
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 815 EQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTV----DRLNKELEKIGEDSKQALQQLQAQLEDYKEKARRevADA 890
Cdd:pfam12128 637 ASREETFARTALKNARLDLRRLFDEKQSEKDKKNKALaerkDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKRE--ART 714
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 891 QRQAKDWASEAEKtsgglsrlQDEIQRLRQALQASQAERDtarldkellaQRLQGLEQeaenkkrsqdDRARQLKGL--- 967
Cdd:pfam12128 715 EKQAYWQVVEGAL--------DAQLALLKAAIAARRSGAK----------AELKALET----------WYKRDLASLgvd 766
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 968 EEKVSRLETELDEEKNTVElltdRVNRGRDQVDQLRtELMQER--SARQDLECDKISLERQNKDLKTRLASSEgfQKPSA 1045
Cdd:pfam12128 767 PDVIAKLKREIRTLERKIE----RIAVRRQEVLRYF-DWYQETwlQRRPRLATQLSNIERAISELQQQLARLI--ADTKL 839
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1046 SLSQLESQNQLLQERLQAEEREKTVLQSTNRKLER-KVKELSIQIEDERQHVNDQKDQLSLRVKALKRQVdeaEEEIERL 1124
Cdd:pfam12128 840 RRAKLEMERKASEKQQVRLSENLRGLRCEMSKLATlKEDANSEQAQGSIGERLAQLEDLKLKRDYLSESV---KKYVEHF 916
|
....*.
gi 16262452 1125 DGLRKK 1130
Cdd:pfam12128 917 KNVIAD 922
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
718-1029 |
3.36e-05 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 48.03 E-value: 3.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 718 RAAVETTLRETQEENDEFRRRILG----LEQQLKETRG-LVDGGEAVEARLRDKLQRLEAEKQQLE-EALNASQEEEGSL 791
Cdd:COG5185 248 LAQTSDKLEKLVEQNTDLRLEKLGenaeSSKRLNENANnLIKQFENTKEKIAEYTKSIDIKKATESlEEQLAAAEAEQEL 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 792 AAAKRALEARLEEAQRGLARlGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNKELEKIGEDSKQALQQ 871
Cdd:COG5185 328 EESKRETETGIQNLTAEIEQ-GQESLTENLEAIKEEIENIVGEVELSKSSEELDSFKDTIESTKESLDEIPQNQRGYAQE 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 872 LQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRqalqasqaerdtaRLDKELLAQRLQGLEQEAE 951
Cdd:COG5185 407 ILATLEDTLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVM-------------READEESQSRLEEAYDEIN 473
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16262452 952 NKKRSQDDRarqlkgLEEKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKD 1029
Cdd:COG5185 474 RSVRSKKED------LNEELTQIESRVSTLKATLEKLRAKLERQLEGVRSKLDQVAESLKDFMRARGYAHILALENLI 545
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
698-993 |
5.50e-05 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 46.82 E-value: 5.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 698 EEASKAKMVAEAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQRLEAEKQQL 777
Cdd:COG4372 6 EKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 778 EEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNKE 857
Cdd:COG4372 86 NEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEE 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 858 LEKIGEDSKQALQQLQAQLEDYKEKARREVADAQRQAKD--WASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLD 935
Cdd:COG4372 166 LAALEQELQALSEAEAEQALDELLKEANRNAEKEEELAEaeKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELE 245
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 16262452 936 KELLAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLETELDEEKNTVELLTDRVN 993
Cdd:COG4372 246 EDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLN 303
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
513-1184 |
8.73e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 46.96 E-value: 8.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 513 QEVEHVRQQYQRDTEQLRRSMQDATQDHAVLEAERqKMSALVRGLQRELEETSEETGHWQSMFQKNKEDLRATKQELLQL 592
Cdd:TIGR00606 203 QEHQMELKYLKQYKEKACEIRDQITSKEAQLESSR-EIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQM 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 593 RMEKEEMEEELGEKIEVLQRELEQARASAGdtRQVEVLKKELLRTQEELKELQAERQ--SQEVAgrhrdrELEKQLAVLR 670
Cdd:TIGR00606 282 EKDNSELELKMEKVFQGTDEQLNDLYHNHQ--RTVREKERELVDCQRELEKLNKERRllNQEKT------ELLVEQGRLQ 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 671 VEADR------GRELEEQNLQLQKTLQQLRQDCEEASKAKMV-------AEAEATVLGQRRAAVETTLRETQEENDEFRR 737
Cdd:TIGR00606 354 LQADRhqehirARDSLIQSLATRLELDGFERGPFSERQIKNFhtlvierQEDEAKTAAQLCADLQSKERLKQEQADEIRD 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 738 RILGLEQQLKETRGLVDGGEAVEARLRDKLQRLEAEKQ---QLEEALNASQEE-----EGSLAAAKRALEARLEEAQ--- 806
Cdd:TIGR00606 434 EKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDrilELDQELRKAERElskaeKNSLTETLKKEVKSLQNEKadl 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 807 -RGLARLGQEQQTLNRALEEEgKQREVLRRGKAELEEQKRLLD-RTVDRLNKEL-----EKIGEDSKQALQQLQAQLEDY 879
Cdd:TIGR00606 514 dRKLRKLDQEMEQLNHHTTTR-TQMEMLTKDKMDKDEQIRKIKsRHSDELTSLLgyfpnKKQLEDWLHSKSKEINQTRDR 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 880 KEKARREVADAQRQAKDWASEAEKTSGGLSRLQDeiqRLRQALQASQAERDTARLDKELlaqrlqgleqeaenkKRSQDD 959
Cdd:TIGR00606 593 LAKLNKELASLEQNKNHINNELESKEEQLSSYED---KLFDVCGSQDEESDLERLKEEI---------------EKSSKQ 654
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 960 RArQLKGLEEKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELMQE-RSARQDLECDKISLERQNKDLKTRLASSE 1038
Cdd:TIGR00606 655 RA-MLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKlRLAPDKLKSTESELKKKEKRRDEMLGLAP 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1039 G----FQKPSASLSQLESQNQLLQERLQAE----EREKTVLQSTNRKLERK---------VKELSIQIED-----ERQHV 1096
Cdd:TIGR00606 734 GrqsiIDLKEKEIPELRNKLQKVNRDIQRLkndiEEQETLLGTIMPEEESAkvcltdvtiMERFQMELKDverkiAQQAA 813
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1097 NDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQREVEEQHEVNEQLQARIKSLEKDSWRKASRSAAESALKNEGLSS 1176
Cdd:TIGR00606 814 KLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVEL 893
|
....*...
gi 16262452 1177 DEEFDSVY 1184
Cdd:TIGR00606 894 STEVQSLI 901
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
768-991 |
9.50e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.55 E-value: 9.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 768 QRLEAEKQQLEEALNASQEEEGSLAAAKRALEARLEE--AQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKR 845
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEAEAALEEfrQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLA 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 846 LLDRTVDRLNKELEKIGEDSKQAlqqlqaqledykeKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQA- 924
Cdd:COG3206 244 ALRAQLGSGPDALPELLQSPVIQ-------------QLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQe 310
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16262452 925 SQAERDTARLDKELLAQRLQGLEQEAEnkkrSQDDRARQLKGLEEKVSRLETELDEEKNTVELLTDR 991
Cdd:COG3206 311 AQRILASLEAELEALQAREASLQAQLA----QLEARLAELPELEAELRRLEREVEVARELYESLLQR 373
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
646-942 |
9.61e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 46.66 E-value: 9.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 646 AERQSQEVAGRHRDRELEKQLAVLRVEADRGRELEEQNLQLQKtlqqlrqdcEEASKAKMVAEAEATVLGQRRAAVETTL 725
Cdd:pfam17380 285 SERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQA---------EMDRQAAIYAEQERMAMERERELERIRQ 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 726 RETQEENDEFRRRILGLEQ---------QLKETRGLVDGGEAVEARLRDKLQRLEAEKQQLEEALNASQEEEGSLAAAKR 796
Cdd:pfam17380 356 EERKRELERIRQEEIAMEIsrmrelerlQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQR 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 797 ALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNKELEKIGEDSKQALQQLQAQL 876
Cdd:pfam17380 436 EVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERKR 515
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16262452 877 EDY-KEKARREVADAQRQAKDWASEAEKTSGGLS---RLQDEIQRL---RQALQASQAERDTARLDKELLAQR 942
Cdd:pfam17380 516 KLLeKEMEERQKAIYEEERRREAEEERRKQQEMEerrRIQEQMRKAteeRSRLEAMEREREMMRQIVESEKAR 588
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
970-1138 |
9.68e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 45.30 E-value: 9.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 970 KVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQ 1049
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1050 LESqnqlLQERLQAEEREKTVLQSTNRKLERKVKELSIQIEDERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRK 1129
Cdd:COG1579 91 YEA----LQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAERE 166
|
....*....
gi 16262452 1130 KAQREVEEQ 1138
Cdd:COG1579 167 ELAAKIPPE 175
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
363-468 |
1.28e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 45.92 E-value: 1.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 363 ELTRKVEELQRKLDEEVK-KRQKLEPsqvgLERQLEEKTEECSRLQELLERRKGEAQQSNKELQNMKRLLDQgedLRHGL 441
Cdd:PRK12704 61 EAKEEIHKLRNEFEKELReRRNELQK----LEKRLLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEK---KEEEL 133
|
90 100
....*....|....*....|....*....
gi 16262452 442 ETQVMELQNKLKHVQG--PEPAKEVLLKD 468
Cdd:PRK12704 134 EELIEEQLQELERISGltAEEAKEILLEK 162
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
367-936 |
1.42e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 46.26 E-value: 1.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 367 KVEELQRKLdeeVKKRQKLEPSQVGLERQLEEKTEECSRLQELLERRKGEAQQSNKELQNMKRLLDQG-------EDLRH 439
Cdd:pfam15921 343 KIEELEKQL---VLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDtgnsitiDHLRR 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 440 GLETQVMELQNKlkhvqgpepakEVLLKDLletrelleevlegKQRVEEQLrlrERELTALKGalKEEVAsrdQEVEHVR 519
Cdd:pfam15921 420 ELDDRNMEVQRL-----------EALLKAM-------------KSECQGQM---ERQMAAIQG--KNESL---EKVSSLT 467
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 520 QQYQRDTEQLRRSMQDATQDHAVLEAERQKMSALVRGLQ---RELEETSEETGHWQSMFQKNKEDLRATKQELLQLRMEK 596
Cdd:pfam15921 468 AQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQekeRAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQ 547
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 597 EE------MEEELGEKIEVLQRELEQARASAGD------TRQVE--VLKKELLRTQEELKELQ-----AERQSQEVAGRH 657
Cdd:pfam15921 548 TEcealklQMAEKDKVIEILRQQIENMTQLVGQhgrtagAMQVEkaQLEKEINDRRLELQEFKilkdkKDAKIRELEARV 627
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 658 RDRELEKQLAV------LRVEADRGRELEEQNLQLQKTLQQLRQDCEE------------------ASKAKMVAEAEATV 713
Cdd:pfam15921 628 SDLELEKVKLVnagserLRAVKDIKQERDQLLNEVKTSRNELNSLSEDyevlkrnfrnkseemettTNKLKMQLKSAQSE 707
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 714 LGQRRaaveTTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQRLEAEKQQLEEALNASQEEEGSLAA 793
Cdd:pfam15921 708 LEQTR----NTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVAT 783
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 794 AKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQ----REVLRRgkAELEEQKRLLDRTVDRlnKELEKIGEDSKQAL 869
Cdd:pfam15921 784 EKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQfaecQDIIQR--QEQESVRLKLQHTLDV--KELQGPGYTSNSSM 859
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16262452 870 QQLQAQLEDYKeKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDK 936
Cdd:pfam15921 860 KPRLLQPASFT-RTHSNVPSSQSTASFLSHHSRKTNALKEDPTRDLKQLLQELRSVINEEPTVQLSK 925
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
884-1154 |
1.83e-04 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 45.89 E-value: 1.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 884 RREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQalqasqaerdtarldkellaqrlqgLEQEAENKKRSQDDRARQ 963
Cdd:pfam05557 26 KRARIELEKKASALKRQLDRESDRNQELQKRIRLLEK-------------------------REAEAEEALREQAELNRL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 964 LKGLEEKVSRLETELDEEKNTVELLTDRVNrgrDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSE----G 1039
Cdd:pfam05557 81 KKKYLEALNKKLNEKESQLADAREVISCLK---NELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEqlrqN 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1040 FQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERkVKELSIQIEDERQHvNDQKDQLSLRVKALKRQVDEAEE 1119
Cdd:pfam05557 158 LEKQQSSLAEAEQRIKELEFEIQSQEQDSEIVKNSKSELAR-IPELEKELERLREH-NKHLNENIENKLLLKEEVEDLKR 235
|
250 260 270
....*....|....*....|....*....|....*.
gi 16262452 1120 EIERLDGLR-KKAQREVEeqhevNEQLQARIKSLEK 1154
Cdd:pfam05557 236 KLEREEKYReEAATLELE-----KEKLEQELQSWVK 266
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
440-980 |
2.71e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 45.42 E-value: 2.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 440 GLETQVMELQNKLKHVQGP-EPAKEVL------LKDLLETRELLEEVLEGKQRVEEQLRLREREltalKGALKEEVASRD 512
Cdd:PRK02224 210 GLESELAELDEEIERYEEQrEQARETRdeadevLEEHEERREELETLEAEIEDLRETIAETERE----REELAEEVRDLR 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 513 QEVEHVRqqyQRDTEQLRRSMQDATQDHAVlEAERQKMSALVRGLQRELEETSEEtghwQSMFQKNKEDLRATKQELLQL 592
Cdd:PRK02224 286 ERLEELE---EERDDLLAEAGLDDADAEAV-EARREELEDRDEELRDRLEECRVA----AQAHNEEAESLREDADDLEER 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 593 RMEKEEMEEELGEKIEVLQRELEQARASAGDTR-QVEVLKKELLRTQEELKELQAERQSQEvAGRHRDRELEKQL-AVLR 670
Cdd:PRK02224 358 AEELREEAAELESELEEAREAVEDRREEIEELEeEIEELRERFGDAPVDLGNAEDFLEELR-EERDELREREAELeATLR 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 671 VEADRGRELEEqnLQLQKTLQQLRQDCEEASKAKMVAEAEatvlgQRRAAVETTLRETQEENDEFRRRILGLEQQLKETR 750
Cdd:PRK02224 437 TARERVEEAEA--LLEAGKCPECGQPVEGSPHVETIEEDR-----ERVEELEAELEDLEEEVEEVEERLERAEDLVEAED 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 751 G---LVDGGEAVEARLRDKLQRLEAEKQQLEEaLNASQEEEGSLAAAKRA----LEARLEEAQRGLARLGQEQQTLNRAL 823
Cdd:PRK02224 510 RierLEERREDLEELIAERRETIEEKRERAEE-LRERAAELEAEAEEKREaaaeAEEEAEEAREEVAELNSKLAELKERI 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 824 EEEGKQREVLrrgkAELEEqkrlLDRTVDRLNKELEKIGEdskqalqqlqaqledyKEKARREVADAQRQAKDwASEAEK 903
Cdd:PRK02224 589 ESLERIRTLL----AAIAD----AEDEIERLREKREALAE----------------LNDERRERLAEKRERKR-ELEAEF 643
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16262452 904 TSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDDRarqlKGLEEKVSRLETELDE 980
Cdd:PRK02224 644 DEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEELRERR----EALENRVEALEALYDE 716
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
877-1153 |
3.82e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 44.12 E-value: 3.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 877 EDYKEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAENKKRS 956
Cdd:COG4372 16 FGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAE 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 957 QDDRARQLKGLEEKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLAS 1036
Cdd:COG4372 96 LAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQA 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1037 SEGFQKPSASLSQL-ESQNQLLQERLQAEEREKTVLQSTNRKLERKVKELSIQIEDERQHVNDQKDQLSLRVKALKRQVD 1115
Cdd:COG4372 176 LSEAEAEQALDELLkEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEV 255
|
250 260 270
....*....|....*....|....*....|....*...
gi 16262452 1116 EAEEEIERLDGLRKKAQREVEEQHEVNEQLQARIKSLE 1153
Cdd:COG4372 256 ILKEIEELELAILVEKDTEEEELEIAALELEALEEAAL 293
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
728-1160 |
4.11e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 44.94 E-value: 4.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 728 TQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQRLEAEKQQLEEALNASQEEEGSLAAAKRALEArleeaqr 807
Cdd:COG3096 276 HANERRELSERALELRRELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQAASDHLNLVQTALRQQEK------- 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 808 gLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNKELEkigedskqalqqlqaqleDYK----EKA 883
Cdd:COG3096 349 -IERYQEDLEELTERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLA------------------DYQqaldVQQ 409
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 884 RRevADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDkelLAQRLQgLEQEAenkkRSQDDRARQ 963
Cdd:COG3096 410 TR--AIQYQQAVQALEKARALCGLPDLTPENAEDYLAAFRAKEQQATEEVLE---LEQKLS-VADAA----RRQFEKAYE 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 964 LkgleekvsrleteldeekntVELLTDRVNRGRDQVdqlrtelmqerSARQDLecdkisleRQNKDLKTRLASSEGFQkp 1043
Cdd:COG3096 480 L--------------------VCKIAGEVERSQAWQ-----------TARELL--------RRYRSQQALAQRLQQLR-- 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1044 sASLSQLEsqnQLLQERLQAEEREKTVLQSTNRKLERkvkelSIQIEDERQHVNDQKDQLSlrvkalkrqvDEAEEEIER 1123
Cdd:COG3096 519 -AQLAELE---QRLRQQQNAERLLEEFCQRIGQQLDA-----AEELEELLAELEAQLEELE----------EQAAEAVEQ 579
|
410 420 430
....*....|....*....|....*....|....*....
gi 16262452 1124 LDGLRkkaqreveeQHEvnEQLQARIKSLEKDS--WRKA 1160
Cdd:COG3096 580 RSELR---------QQL--EQLRARIKELAARApaWLAA 607
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
527-866 |
4.46e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.56 E-value: 4.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 527 EQLRRSMQDATQDHAVLEAERQKMSALVRGLQRELeetseeTGHWQSMFQKNKE-DLRATKQELLQLrmekEEMEEELGE 605
Cdd:PRK04863 789 EQLRAEREELAERYATLSFDVQKLQRLHQAFSRFI------GSHLAVAFEADPEaELRQLNRRRVEL----ERALADHES 858
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 606 KIEVLQRELEQARASAGDTRQVEVLKKELLRT--QEELKELQAERQSQEVAGRHRDR------ELEKQLAVLRVEADRGR 677
Cdd:PRK04863 859 QEQQQRSQLEQAKEGLSALNRLLPRLNLLADEtlADRVEEIREQLDEAEEAKRFVQQhgnalaQLEPIVSVLQSDPEQFE 938
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 678 ELEEQNLQLQKTLqqlrqdceEASKAKMVAEAEatvLGQRRAAV-----ETTLRETQEENDEFRRRILGLEQQLKETRGL 752
Cdd:PRK04863 939 QLKQDYQQAQQTQ--------RDAKQQAFALTE---VVQRRAHFsyedaAEMLAKNSDLNEKLRQRLEQAEQERTRAREQ 1007
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 753 VDGgeaVEARLRDKLQRLeaekQQLEEALNASQEEegsLAAAKRALEARLEEAQRGL-ARLGQEQQTLNRALEEEGKQRE 831
Cdd:PRK04863 1008 LRQ---AQAQLAQYNQVL----ASLKSSYDAKRQM---LQELKQELQDLGVPADSGAeERARARRDELHARLSANRSRRN 1077
|
330 340 350
....*....|....*....|....*....|....*
gi 16262452 832 vlrrgkaELEEQKRLLDRTVDRLNKELEKIGEDSK 866
Cdd:PRK04863 1078 -------QLEKQLTFCEAEMDNLTKKLRKLERDYH 1105
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
557-825 |
4.56e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.52 E-value: 4.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 557 LQRELEETSEETGHWQSMFQKNKEDLRATKQELLQLRMEKEEMEEELGekIEVLQRELEQARAsagdtrqvevLKKELLR 636
Cdd:COG4913 615 LEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEID--VASAEREIAELEA----------ELERLDA 682
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 637 TQEELKELQAERQSQEvagrHRDRELEKQLAVLRVEADRGRELEEQNLQLQKTLQQLRQDCEEASKAKMVAEAEATVLGQ 716
Cdd:COG4913 683 SSDDLAALEEQLEELE----AELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAA 758
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 717 RRAAVETTLRET-QEENDEFRRRILGLEQQLKETRG---------LVDGGEAVEAR--LRDKLQRLEAE-----KQQLEE 779
Cdd:COG4913 759 LGDAVERELRENlEERIDALRARLNRAEEELERAMRafnrewpaeTADLDADLESLpeYLALLDRLEEDglpeyEERFKE 838
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 16262452 780 ALNASQEEEgsLAAAKRALEARLEEAQRGLARlgqeqqtLNRALEE 825
Cdd:COG4913 839 LLNENSIEF--VADLLSKLRRAIREIKERIDP-------LNDSLKR 875
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
727-967 |
5.26e-04 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 44.44 E-value: 5.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 727 ETQEENDEFRRRIlglEQQLKETRGLVDGGEAVEARlrdklQRLEAEKQQLEEALNASQEEEGSlaAAKRALEARlEEAQ 806
Cdd:NF012221 1539 ESSQQADAVSKHA---KQDDAAQNALADKERAEADR-----QRLEQEKQQQLAAISGSQSQLES--TDQNALETN-GQAQ 1607
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 807 RglARLGQEQQTLNRALEEEGKQREVLR-----RGKAELEEQKRLLDRTVDRLNKELEKIGEDSKQALqqlqaqledykE 881
Cdd:NF012221 1608 R--DAILEESRAVTKELTTLAQGLDALDsqatyAGESGDQWRNPFAGGLLDRVQEQLDDAKKISGKQL-----------A 1674
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 882 KARREVADAQRQAKDwasEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAE---NKKRSQD 958
Cdd:NF012221 1675 DAKQRHVDNQQKVKD---AVAKSEAGVAQGEQNQANAEQDIDDAKADAEKRKDDALAKQNEAQQAESDANaaaNDAQSRG 1751
|
....*....
gi 16262452 959 DRARQLKGL 967
Cdd:NF012221 1752 EQDASAAEN 1760
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
702-938 |
5.26e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 44.24 E-value: 5.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 702 KAKMVAEAEATV-----LGQRRAAVETTLRETQEENDEFRRRILGLEQQL---KETRGLVDggeaVEARLRDKLQRLEAE 773
Cdd:COG3206 149 LAAAVANALAEAyleqnLELRREEARKALEFLEEQLPELRKELEEAEAALeefRQKNGLVD----LSEEAKLLLQQLSEL 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 774 KQQLEEALNASQEEEGSLAAAKRALEARLEEAQR-----GLARLGQEQQTLNRALEEE----GKQREVLRRGKAELEEQK 844
Cdd:COG3206 225 ESQLAEARAELAEAEARLAALRAQLGSGPDALPEllqspVIQQLRAQLAELEAELAELsaryTPNHPDVIALRAQIAALR 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 845 RLLDRTVDRLNKELEKIGEDSKQALQQLQAQLEDYKEKARREVADAQRqakdwaseaektsggLSRLQDEIQRLRQALQA 924
Cdd:COG3206 305 AQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAE---------------LRRLEREVEVARELYES 369
|
250
....*....|....
gi 16262452 925 SQAERDTARLDKEL 938
Cdd:COG3206 370 LLQRLEEARLAEAL 383
|
|
| ADIP |
pfam11559 |
Afadin- and alpha -actinin-Binding; This family is found in mammals where it is localized at ... |
1023-1124 |
6.80e-04 |
|
Afadin- and alpha -actinin-Binding; This family is found in mammals where it is localized at cell-cell adherens junctions, and in Sch. pombe and other fungi where it anchors spindle-pole bodies to spindle microtubules. It is a coiled-coil structure, and in pombe, it is required for anchoring the minus end of spindle microtubules to the centrosome equivalent, the spindle-pole body. The name ADIP derives from the family being composed of Afadin- and alpha -Actinin-Binding Proteins localized at Cell-Cell Adherens Junctions.
Pssm-ID: 463295 [Multi-domain] Cd Length: 151 Bit Score: 41.53 E-value: 6.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1023 LERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERKVKELSIQIEDERQHVNDQKDQ 1102
Cdd:pfam11559 44 LQQRDRDLEFRESLNETIRTLEAEIERLQSKIERLKTQLEDLERELALLQAKERQLEKKLKTLEQKLKNEKEELQRLKNA 123
|
90 100
....*....|....*....|..
gi 16262452 1103 LSLRVKALKRQVDEAEEEIERL 1124
Cdd:pfam11559 124 LQQIKTQFAHEVKKRDREIEKL 145
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
488-1149 |
7.75e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 44.06 E-value: 7.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 488 EQLRLRERELTALKGALKEEVASRDQEVEHVRQQYQRDTEQLRRSMQDATQDHAVLEAERQKMSALVRGLQRELEETSEE 567
Cdd:pfam12128 251 NTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELEALEDQ 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 568 TGHWQsmfqknKEDLRATKQELLQLrmekeemeEELGEKIEVLQRELEQARASAGDTRQvevlkkellrTQEELKELQAE 647
Cdd:pfam12128 331 HGAFL------DADIETAAADQEQL--------PSWQSELENLEERLKALTGKHQDVTA----------KYNRRRSKIKE 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 648 RQSQEVAGrhrdreLEKQLAVLRVEADRGRELEEQNLQlqktlqqlrqdceeaskakmvaeaeatvlgqrraAVETTLRE 727
Cdd:pfam12128 387 QNNRDIAG------IKDKLAKIREARDRQLAVAEDDLQ----------------------------------ALESELRE 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 728 TQEE-NDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQRLEaEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQ 806
Cdd:pfam12128 427 QLEAgKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQLENFDE-RIERAREEQEAANAEVERLQSELRQARKRRDQAS 505
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 807 RGLARLGQEQQTLNRALEE--------EGKQREVLRRGKAELEEQ------KRLLDRT-----------VDRLNkeLEKI 861
Cdd:pfam12128 506 EALRQASRRLEERQSALDElelqlfpqAGTLLHFLRKEAPDWEQSigkvisPELLHRTdldpevwdgsvGGELN--LYGV 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 862 GEDSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEK----TSGGLSRLQDEIQRLRQALQasQAERDTARLDKE 937
Cdd:pfam12128 584 KLDLKRIDVPEWAASEEELRERLDKAEEALQSAREKQAAAEEqlvqANGELEKASREETFARTALK--NARLDLRRLFDE 661
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 938 LLAQRLQGLEQEAENKKRSQDDR---ARQLKGLEEKVSRLETELDEEK--NTVELLTDR---VNRGRDQVDQLRTELMQE 1009
Cdd:pfam12128 662 KQSEKDKKNKALAERKDSANERLnslEAQLKQLDKKHQAWLEEQKEQKreARTEKQAYWqvvEGALDAQLALLKAAIAAR 741
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1010 RSARQ-----------------DLECDKIS-LERQNKDLKTRLASSEGFQkpsaslSQLESQNQLLQERLQAeerEKTVL 1071
Cdd:pfam12128 742 RSGAKaelkaletwykrdlaslGVDPDVIAkLKREIRTLERKIERIAVRR------QEVLRYFDWYQETWLQ---RRPRL 812
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16262452 1072 QSTNRKLERKVKELSIQIEDERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQREVEEQHevNEQLQARI 1149
Cdd:pfam12128 813 ATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLATLKEDAN--SEQAQGSI 888
|
|
| Golgin_A5 |
pfam09787 |
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining ... |
974-1124 |
7.94e-04 |
|
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining Golgi structure. They stimulate the formation of Golgi stacks and ribbons, and are involved in intra-Golgi retrograde transport. Two main interactions have been characterized: one with RAB1A that has been activated by GTP-binding and another with isoform CASP of CUTL1.
Pssm-ID: 462900 [Multi-domain] Cd Length: 305 Bit Score: 42.82 E-value: 7.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 974 LETELDEEKNTVELLTDRVNRGRDQVDQLRTElMQERSARQDLECDkiSLERQNKDLKTRLASSegFQKPSASLSQLESQ 1053
Cdd:pfam09787 45 LTLELEELRQERDLLREEIQKLRGQIQQLRTE-LQELEAQQQEEAE--SSREQLQELEEQLATE--RSARREAEAELERL 119
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 16262452 1054 NQLLQERLQAEEREKTVLQSTNRKLERKVKELSIQIEDeRQHVNDQKDQLSLRVKALKRQVDEAEEEIERL 1124
Cdd:pfam09787 120 QEELRYLEEELRRSKATLQSRIKDREAEIEKLRNQLTS-KSQSSSSQSELENRLHQLTETLIQKQTMLEAL 189
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
547-806 |
8.94e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 43.38 E-value: 8.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 547 RQKMSALVRGLQR----ELEETSEETGHWQsmFQKNKEDLRATKQELLQLRMEKEEMEEELGEKIEVLQRELEQARASAG 622
Cdd:PRK05771 15 KSYKDEVLEALHElgvvHIEDLKEELSNER--LRKLRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 623 DTrqVEVLKKELLRTQEELKELQAERqsqevagrhrdRELEKQLAVLR----VEADRGRELEEQNLQLQKTLQQLRQDCE 698
Cdd:PRK05771 93 EE--LEKIEKEIKELEEEISELENEI-----------KELEQEIERLEpwgnFDLDLSLLLGFKYVSVFVGTVPEDKLEE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 699 EASKAKMVAEAEATVLGQRRAAVETTLRETQEE-NDEFRRriLGLEQQLKETRGLVDggEAVEaRLRDKLQRLEAEKQQL 777
Cdd:PRK05771 160 LKLESDVENVEYISTDKGYVYVVVVVLKELSDEvEEELKK--LGFERLELEEEGTPS--ELIR-EIKEELEEIEKERESL 234
|
250 260 270
....*....|....*....|....*....|
gi 16262452 778 EEALNA-SQEEEGSLAAAKRALEARLEEAQ 806
Cdd:PRK05771 235 LEELKElAKKYLEELLALYEYLEIELERAE 264
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
513-1133 |
9.02e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 43.67 E-value: 9.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 513 QEVEHvrqqYQRDTEQLRRSMQDATQDHAVLEAERQKMSALVR--GLQRELEETSEETGHWQSMFQKNKEDLRatkQELL 590
Cdd:pfam12128 221 QQVEH----WIRDIQAIAGIMKIRPEFTKLQQEFNTLESAELRlsHLHFGYKSDETLIASRQEERQETSAELN---QLLR 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 591 QLRMEKEEMEEELGEKIEVLQRELEQARAsagdtrQVEVLKKELLRTQEELKELQAERQSQEVAGRHRDRELEKQLAVLr 670
Cdd:pfam12128 294 TLDDQWKEKRDELNGELSAADAAVAKDRS------ELEALEDQHGAFLDADIETAAADQEQLPSWQSELENLEERLKAL- 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 671 veADRGRELEEQNLQLQKTLQQLRQDCEEASKAKMVAEAEATVLGQRRA-----AVETTLRETQEE-NDEFRRRILGLEQ 744
Cdd:pfam12128 367 --TGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLAVAeddlqALESELREQLEAgKLEFNEEEYRLKS 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 745 QLKETRGLVDGGEAVEARLRDKLQRLEaEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALE 824
Cdd:pfam12128 445 RLGELKLRLNQATATPELLLQLENFDE-RIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALD 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 825 E--------EGKQREVLRRGKAELEEQK-RLLDRTVdrlnkeLEKIGEDSKQALQQLQAQLEDYKEKARREvadaQRQAK 895
Cdd:pfam12128 524 ElelqlfpqAGTLLHFLRKEAPDWEQSIgKVISPEL------LHRTDLDPEVWDGSVGGELNLYGVKLDLK----RIDVP 593
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 896 DWASEAEKtsgglsrLQDEIQRLRQALQASQAERdtARLDKELLAqrlqgLEQEAENKKRSQDDRARQLKGLEEKVSRLE 975
Cdd:pfam12128 594 EWAASEEE-------LRERLDKAEEALQSAREKQ--AAAEEQLVQ-----ANGELEKASREETFARTALKNARLDLRRLF 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 976 TELDEEKntvelltDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQ 1055
Cdd:pfam12128 660 DEKQSEK-------DKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQVVEGALDAQLA 732
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16262452 1056 LLQERLQAEErektvlqsTNRKLERKvkelsiQIEDERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQR 1133
Cdd:pfam12128 733 LLKAAIAARR--------SGAKAELK------ALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAVRRQEVLR 796
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
699-1179 |
9.70e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 43.42 E-value: 9.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 699 EASKAKMVAEAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQRLEAEKQQLE 778
Cdd:TIGR00618 184 MEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLK 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 779 EALNASQEEEGSLAAAKRALE--------ARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRT 850
Cdd:TIGR00618 264 QLRARIEELRAQEAVLEETQErinrarkaAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQ 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 851 VDRLNKELEKIGEDSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQR-----------LR 919
Cdd:TIGR00618 344 RRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQAtidtrtsafrdLQ 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 920 QALQASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLETELDEEKNTVELLTDRVNRGRDQV 999
Cdd:TIGR00618 424 GQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEP 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1000 DQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLE 1079
Cdd:TIGR00618 504 CPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSK 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1080 R---KVKELSIQIEDERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQREVEEQHEVNEQLQARIKSLEKDS 1156
Cdd:TIGR00618 584 EdipNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREH 663
|
490 500
....*....|....*....|...
gi 16262452 1157 WRKASRSAAESALKNEGLSSDEE 1179
Cdd:TIGR00618 664 ALSIRVLPKELLASRQLALQKMQ 686
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
824-1171 |
1.17e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 43.35 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 824 EEEGKQREVLRRGKAELEEQKRlldrTVDRLNKELEKIGEDSK------QALQQLQAQLEDYKEKARREVADAQRQAKDW 897
Cdd:PRK01156 325 HAIIKKLSVLQKDYNDYIKKKS----RYDDLNNQILELEGYEMdynsylKSIESLKKKIEEYSKNIERMSAFISEILKIQ 400
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 898 ASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEA-----------ENKKRSQDDRARQLKG 966
Cdd:PRK01156 401 EIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSvcpvcgttlgeEKSNHIINHYNEKKSR 480
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 967 LEEKVSRLETE---LDEEKNTVELLTDRVNRGrdQVDQLRTELMQERSARQDLECDKISLER-QNKDLKTRLASSegfQK 1042
Cdd:PRK01156 481 LEEKIREIEIEvkdIDEKIVDLKKRKEYLESE--EINKSINEYNKIESARADLEDIKIKINElKDKHDKYEEIKN---RY 555
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1043 PSASLSQLESQN----QLLQER----LQAEEREKTVLQSTNRKLERKVKELSIQIEDERQHVNDQKDQLSLRVKALKRQV 1114
Cdd:PRK01156 556 KSLKLEDLDSKRtswlNALAVIslidIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKY 635
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16262452 1115 DEAEEEIERLDGLRKKAQREVEEQHEVNE------QLQARIKSLEKDswRKASRSAAESALKN 1171
Cdd:PRK01156 636 NEIQENKILIEKLRGKIDNYKKQIAEIDSiipdlkEITSRINDIEDN--LKKSRKALDDAKAN 696
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
911-1034 |
1.17e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 42.65 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 911 LQDEIQRLRQALQASQAERDtarldkellaqRLQGLEQEAenkkrsqddrARQLKGLEEKVSRLETELDEEKNTVELLTD 990
Cdd:PRK09039 79 LQDSVANLRASLSAAEAERS-----------RLQALLAEL----------AGAGAAAEGRAGELAQELDSEKQVSARALA 137
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 16262452 991 RVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRL 1034
Cdd:PRK09039 138 QVELLNQQIAALRRQLAALEAALDASEKRDRESQAKIADLGRRL 181
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
757-1182 |
1.19e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 42.96 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 757 EAVEARLRDKLQRLEAEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRG 836
Cdd:pfam07888 30 ELLQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSAS 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 837 KAELEEQKRLLDRTVDRLNKELEKIGEDSKQALQQLQAQLEDYkEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQ 916
Cdd:pfam07888 110 SEELSEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERETEL-ERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELR 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 917 RLR---QALQASQAERDTArldkellAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLETELDEEKNTVELLTDRVN 993
Cdd:pfam07888 189 SLSkefQELRNSLAQRDTQ-------VLQLQDTITTLTQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELS 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 994 RGRDQVDQLRTELMQERsarqdLECDKISLerqnkdlktrlassegfQKPSASLSQLESQNQLLQER---LQAEEREKTV 1070
Cdd:pfam07888 262 SMAAQRDRTQAELHQAR-----LQAAQLTL-----------------QLADASLALREGRARWAQERetlQQSAEADKDR 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1071 LQSTNRKLERKVKELsiqiEDERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQREVEEQHEVNEQLQARIK 1150
Cdd:pfam07888 320 IEKLSAELQRLEERL----QEERMEREKLEVELGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAEKQELLEYIR 395
|
410 420 430
....*....|....*....|....*....|..
gi 16262452 1151 SLEKDSWRKASRSAAESALKNEGLSSDEEFDS 1182
Cdd:pfam07888 396 QLEQRLETVADAKWSEAALTSTERPDSPLSDS 427
|
|
| PRK12705 |
PRK12705 |
hypothetical protein; Provisional |
1025-1164 |
1.22e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 237178 [Multi-domain] Cd Length: 508 Bit Score: 42.77 E-value: 1.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1025 RQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEE---REKTVLQSTNRKLERKVKELSIQIEDerqhVNDQKD 1101
Cdd:PRK12705 30 RLAKEAERILQEAQKEAEEKLEAALLEAKELLLRERNQQRQearREREELQREEERLVQKEEQLDARAEK----LDNLEN 105
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16262452 1102 QLSLRVKALKRQVDEAEEEIERLD-------GLRKKAQREV---EEQHEVNEQLQARIKSLEKDSWRKASRSA 1164
Cdd:PRK12705 106 QLEEREKALSARELELEELEKQLDnelyrvaGLTPEQARKLllkLLDAELEEEKAQRVKKIEEEADLEAERKA 178
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
888-1155 |
1.27e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 43.17 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 888 ADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDKELlaqrlqGLEQEAENKKRSQDDRARQLKGL 967
Cdd:pfam05483 165 ARSAEKTKKYEYEREETRQVYMDLNNNIEKMILAFEELRVQAENARLEMHF------KLKEDHEKIQHLEEEYKKEINDK 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 968 EEKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASL 1047
Cdd:pfam05483 239 EKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEED 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1048 SQLESQN--QLLQER---LQAEEREKTVLQSTNRKLERKVKELSIQIEDERQHVNDQKDQLSLRVKALKRQVDEAEE--- 1119
Cdd:pfam05483 319 LQIATKTicQLTEEKeaqMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEmtk 398
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 16262452 1120 -------EIERLDGLRKKAQREVEEQHEVnEQLQARIKSLEKD 1155
Cdd:pfam05483 399 fknnkevELEELKKILAEDEKLLDEKKQF-EKIAEELKGKEQE 440
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
363-988 |
1.32e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 43.17 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 363 ELTRKVEELQRKLDEEVKKRQKLEPSQVGLERQLEEKTEECSRLQELLERRKGEAQQSNKEL----QNMKRLLDQGEDLR 438
Cdd:pfam05483 124 ELQFENEKVSLKLEEEIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQVYmdlnNNIEKMILAFEELR 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 439 HGLETQVMELQNKLKH----VQGPEPAKEVLLKDLLETRELLEEVLEGKQRVEEQLRLRERELTALKGALKEEVASRDQE 514
Cdd:pfam05483 204 VQAENARLEMHFKLKEdhekIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDEN 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 515 VEHV---RQQYQRDTEQLRRSMQDATQDHAVLEAERQKMSALVRGLQRELEETSEETGHWQSMFQKNKEDLRATKQELLQ 591
Cdd:pfam05483 284 LKELiekKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEE 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 592 LRMEKEEMEEELGEKIEVLQREL--------EQARASAGDTRQVEVLKKELLRTQEELKE-LQAERQSQEVAGRHRD--- 659
Cdd:pfam05483 364 LLRTEQQRLEKNEDQLKIITMELqkksseleEMTKFKNNKEVELEELKKILAEDEKLLDEkKQFEKIAEELKGKEQElif 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 660 --RELEKQLAVLRVEADRGRELEEQNLQLQKTLQQLRQDcEEASKAKMVAEAEATVLGQRRAAVETT-----LRETQEEN 732
Cdd:pfam05483 444 llQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEK-EKLKNIELTAHCDKLLLENKELTQEASdmtleLKKHQEDI 522
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 733 DEFRRRilgLEQQLKETRGLvdggEAVEARLRDKLQRLEAE-KQQLEEA---LNASQEEEGSLAAAKRALEARLEEAQRG 808
Cdd:pfam05483 523 INCKKQ---EERMLKQIENL----EEKEMNLRDELESVREEfIQKGDEVkckLDKSEENARSIEYEVLKKEKQMKILENK 595
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 809 LARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNKELEKIGEDSKQALQQLQAQLEDYKEKARREVA 888
Cdd:pfam05483 596 CNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKISEEKLLE 675
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 889 DAQRqAKDWASEAEKTSGGLS-RLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDDrarQLKGL 967
Cdd:pfam05483 676 EVEK-AKAIADEAVKLQKEIDkRCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYKNKEQEQSSAKAALEI---ELSNI 751
|
650 660
....*....|....*....|.
gi 16262452 968 EEKVSRLETELDEEKNTVELL 988
Cdd:pfam05483 752 KAELLSLKKQLEIEKEEKEKL 772
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
758-1042 |
1.35e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.80 E-value: 1.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 758 AVEARLRDKLQRLEAEKQ-QLEEALNASQEEEGSLAAAKRALE-ARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRR 835
Cdd:pfam17380 309 AREVERRRKLEEAEKARQaEMDRQAAIYAEQERMAMERERELErIRQEERKRELERIRQEEIAMEISRMRELERLQMERQ 388
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 836 GKAELEEQKRLLDRTVDRLNKELE-KIGEDSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGGLSRL-QD 913
Cdd:pfam17380 389 QKNERVRQELEAARKVKILEEERQrKIQQQKVEMEQIRAEQEEARQREVRRLEEERAREMERVRLEEQERQQQVERLrQQ 468
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 914 EIQRLRQALQASQAERDTARLDKellaQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLETELDEEKNTVELLTDRvn 993
Cdd:pfam17380 469 EEERKRKKLELEKEKRDRKRAEE----QRRKILEKELEERKQAMIEEERKRKLLEKEMEERQKAIYEEERRREAEEER-- 542
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 16262452 994 rgRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQK 1042
Cdd:pfam17380 543 --RKQQEMEERRRIQEQMRKATEERSRLEAMEREREMMRQIVESEKARA 589
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
719-948 |
1.43e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 43.02 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 719 AAVETTLRETQEENDEFRRRILGLEQQL---KETRGLVDGGEAVEARLRDKLQRLEA---EKQQLEEAlnASQEeegSLA 792
Cdd:COG3096 437 ENAEDYLAAFRAKEQQATEEVLELEQKLsvaDAARRQFEKAYELVCKIAGEVERSQAwqtARELLRRY--RSQQ---ALA 511
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 793 AAKRALEARLEEAQRGLARlgqeQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNKELEKIGEDSKQALQQL 872
Cdd:COG3096 512 QRLQQLRAQLAELEQRLRQ----QQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQL 587
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16262452 873 QAQLEDYKEKARREVA--DAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQ 948
Cdd:COG3096 588 EQLRARIKELAARAPAwlAAQDALERLREQSGEALADSQEVTAAMQQLLEREREATVERDELAARKQALESQIERLSQ 665
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
879-988 |
1.45e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.84 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 879 YKEKARREVADAQRQAKDWASEAEKTSGGLSRL-----QDEIQRLRQalqasQAERDTARLDKEL--LAQRLQGLEQEAE 951
Cdd:PRK12704 25 RKKIAEAKIKEAEEEAKRILEEAKKEAEAIKKEalleaKEEIHKLRN-----EFEKELRERRNELqkLEKRLLQKEENLD 99
|
90 100 110
....*....|....*....|....*....|....*..
gi 16262452 952 NKKRSQDDRARQLKGLEEKVSRLETELDEEKNTVELL 988
Cdd:PRK12704 100 RKLELLEKREEELEKKEKELEQKQQELEKKEEELEEL 136
|
|
| COG3899 |
COG3899 |
Predicted ATPase [General function prediction only]; |
485-978 |
1.46e-03 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443106 [Multi-domain] Cd Length: 1244 Bit Score: 42.92 E-value: 1.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 485 RVEEQLRLRERELTALkgALKEEVASRDQEVEHVRQQYQRDTEQLRRSMQDATQ--DHAVLEAERQKMSALVRGLQRELE 562
Cdd:COG3899 760 RFEEAEALLERALAAR--ALAALAALRHGNPPASARAYANLGLLLLGDYEEAYEfgELALALAERLGDRRLEARALFNLG 837
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 563 ETSEETGHWQSMFQKNKEDLRATKQELLQLRMEKEEMEEELGEKIEVLQRELEQARASAgdtrqvevlkKELLRTQEELK 642
Cdd:COG3899 838 FILHWLGPLREALELLREALEAGLETGDAALALLALAAAAAAAAAAAALAAAAAAAARL----------LAAAAAALAAA 907
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 643 ELQAERQSQEVAGRHRDRELEKQLAVLRVEADRGRELEEQNLQLQKTLQQLRQDCEEASKAKMVAEAEATVLGQRRAAVE 722
Cdd:COG3899 908 AAAAALAAAELARLAAAAAAAAALALAAAAAAAAAAALAAAAAAAALAAALALAAAAAAAAAAALAAAAAAAAAAAAAAA 987
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 723 TTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQRLEAEKQQLEEALNASQEEEGSLAAAKRALEARL 802
Cdd:COG3899 988 AAALEAAAAALLALLAAAAAAAAAAAALAAALLAAALAALAAAAAAAALLAAAAALALLAALAAAAAAAAAAAALAAAAA 1067
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 803 EEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNKELEKIGEDSKQALQQLQAQLEDYKEK 882
Cdd:COG3899 1068 LLAAAAAAAAAAAAAAAAAALAAALAAAALAAAAAAALALAAALAALALAAALAALALAAAARAAAALLLLAAALALALA 1147
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 883 ARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDDRAR 962
Cdd:COG3899 1148 ALLLLAALLLALALLLLALAALALAAALAALAAALLAAAAAAAAAAALLAALLALAARLAALLALALLALEAAALLLLLL 1227
|
490
....*....|....*.
gi 16262452 963 QLKGLEEKVSRLETEL 978
Cdd:COG3899 1228 LAALALAAALLALRLL 1243
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
392-621 |
2.19e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 2.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 392 LERQLEEKTEECSRLQELLERRKGEAQQSNKELQNMKRLLDQGEDLRHGLETQVMELQNKLKHVQGPEPAKEVLLKDLle 471
Cdd:COG4942 25 AEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQ-- 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 472 trelleevlegKQRVEEQLR------LRERELTALKGALKEEVASRDQEVEHVRQQYQRDTEQLRRSMQDATQDHAVLEA 545
Cdd:COG4942 103 -----------KEELAELLRalyrlgRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEA 171
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16262452 546 ERQKMSALVRGLQRELEETSEETGHWQSMFQKNKEDLRATKQELLQLRMEKEEMEEELGEKIEVLQRELEQARASA 621
Cdd:COG4942 172 ERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAG 247
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
696-1144 |
2.20e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 42.04 E-value: 2.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 696 DCEEASKAKMVAEAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQRL--EAE 773
Cdd:pfam05557 42 QLDRESDRNQELQKRIRLLEKREAEAEEALREQAELNRLKKKYLEALNKKLNEKESQLADAREVISCLKNELSELrrQIQ 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 774 KQQLE--------EALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKR 845
Cdd:pfam05557 122 RAELElqstnselEELQERLDLLKAKASEAEQLRQNLEKQQSSLAEAEQRIKELEFEIQSQEQDSEIVKNSKSELARIPE 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 846 LlDRTVDRLNKELEKIGEdSKQALQQLQAQLEDYK------EKARREVADAQ-------RQAKDWASEAEKTSGGLSRLQ 912
Cdd:pfam05557 202 L-EKELERLREHNKHLNE-NIENKLLLKEEVEDLKrklereEKYREEAATLElekekleQELQSWVKLAQDTGLNLRSPE 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 913 DEIQRLRQALQASQAerdtarldkelLAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLETELDEEKNTVELLTDRV 992
Cdd:pfam05557 280 DLSRRIEQLQQREIV-----------LKEENSSLTSSARQLEKARRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRV 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 993 ---NRGRDQVDQL----RTELMQERSARQDLECDKiSLERQNKDLKTRLASSEgfqkpsASLSQLESQNQLLQERLQAEE 1065
Cdd:pfam05557 349 lllTKERDGYRAIlesyDKELTMSNYSPQLLERIE-EAEDMTQKMQAHNEEME------AQLSVAEEELGGYKQQAQTLE 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1066 REKTVLQSTNRKLER-----KVKELSIQIED---ERQHVNDQKDQLSLRV----------------------------KA 1109
Cdd:pfam05557 422 RELQALRQQESLADPsyskeEVDSLRRKLETlelERQRLREQKNELEMELerrclqgdydpkktkvlhlsmnpaaeayQQ 501
|
490 500 510
....*....|....*....|....*....|....*
gi 16262452 1110 LKRQVDEAEEEIERLDGLRKKAQREVEEQHEVNEQ 1144
Cdd:pfam05557 502 RKNQLEKLQAEIERLKRLLKKLEDDLEQVLRLPET 536
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
881-994 |
2.23e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.15 E-value: 2.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 881 EKARREVADAQRQAKDWASEAEKTSggLSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDDR 960
Cdd:COG2433 383 EELIEKELPEEEPEAEREKEHEERE--LTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIERLERELSEARSEERRE 460
|
90 100 110
....*....|....*....|....*....|....*..
gi 16262452 961 AR---QLKGLEEKVSRLETELDEEKNTVELLTDRVNR 994
Cdd:COG2433 461 IRkdrEISRLDREIERLERELEEERERIEELKRKLER 497
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
770-1100 |
2.44e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 42.20 E-value: 2.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 770 LEAEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQ--TLNRALEEEGKQREVLRRGkaeleEQKRLL 847
Cdd:PRK01156 407 IKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVcpVCGTTLGEEKSNHIINHYN-----EKKSRL 481
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 848 DRTVDRLNKELEKIGEDSKQALQQlqaqlEDYKEKAR-REVADAQRQAKDWASEAEKTSGGLSRLQDeiqrlrQALQASQ 926
Cdd:PRK01156 482 EEKIREIEIEVKDIDEKIVDLKKR-----KEYLESEEiNKSINEYNKIESARADLEDIKIKINELKD------KHDKYEE 550
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 927 AERDTARLDKELLAQR----LQGLEQ----EAENKKRSQDDRARQLKGLEEKVSRLETELDEEK----NTVELLTDRVNR 994
Cdd:PRK01156 551 IKNRYKSLKLEDLDSKrtswLNALAVisliDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKsyidKSIREIENEANN 630
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 995 GRDQVDQLrtelmqersarQDLECDKISLERQNKDLKTRLASSEGFQKP----SASLSQLESQNQLLQERLQAEEREKTV 1070
Cdd:PRK01156 631 LNNKYNEI-----------QENKILIEKLRGKIDNYKKQIAEIDSIIPDlkeiTSRINDIEDNLKKSRKALDDAKANRAR 699
|
330 340 350
....*....|....*....|....*....|
gi 16262452 1071 LQSTNRKLERKVKELSIQIEDERQHVNDQK 1100
Cdd:PRK01156 700 LESTIEILRTRINELSDRINDINETLESMK 729
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
564-1165 |
3.33e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 41.63 E-value: 3.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 564 TSEETGHWQSMFQKNKEDLRATKQELLQLRMEKEEMEEELGEKIEVLQRELEQARASagdTRQVEVLKKELLRTQEELKE 643
Cdd:pfam05483 97 IEAELKQKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNAT---RHLCNLLKETCARSAEKTKK 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 644 LQAERQSQEVAGRHRDRELEKQLAV---LRVEADRGR-----ELEEQNLQLQKTLQQLRQDCEEASKAKMVAEAEATVLG 715
Cdd:pfam05483 174 YEYEREETRQVYMDLNNNIEKMILAfeeLRVQAENARlemhfKLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKE 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 716 QRRAAVETTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQRLEAEKQQLEEALNASQEEEGSLAAAK 795
Cdd:pfam05483 254 NKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEK 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 796 RALEARLEEAQRGLARLGQEQQTLNRALEEegkqreVLRRGKAELE---EQKRLLDRTVDRLNKELEKIGE--DSKQALQ 870
Cdd:pfam05483 334 EAQMEELNKAKAAHSFVVTEFEATTCSLEE------LLRTEQQRLEkneDQLKIITMELQKKSSELEEMTKfkNNKEVEL 407
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 871 QLQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAE-----RDTARLDKELLAQRLQG 945
Cdd:pfam05483 408 EELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSeehylKEVEDLKTELEKEKLKN 487
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 946 LEQEA-------ENKKRSQD--DRARQLKGLEEKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSarqDL 1016
Cdd:pfam05483 488 IELTAhcdklllENKELTQEasDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGD---EV 564
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1017 ECdkisleRQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERKVKELSIQIEDERQHV 1096
Cdd:pfam05483 565 KC------KLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKV 638
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16262452 1097 NDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQREVEEQHEVNEQLQARIKSLEKDSWRKASRSAA 1165
Cdd:pfam05483 639 NKLELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIAEMVA 707
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
632-1086 |
3.44e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.87 E-value: 3.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 632 KELLRTQEELKELQaerqsqevagrhRDRELEKQL----------AVLRVEADRGRELEEqnlqlqktlqqlrqdceeas 701
Cdd:PRK04863 240 RENRMTLEAIRVTQ------------SDRDLFKHLitestnyvaaDYMRHANERRVHLEE-------------------- 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 702 kakmVAEAEATVLGQRR--AAVETTLRETQEENDEFRRRILGLEQQLKETR---GLVDGGEaveaRLRDKLQR----LEA 772
Cdd:PRK04863 288 ----ALELRRELYTSRRqlAAEQYRLVEMARELAELNEAESDLEQDYQAASdhlNLVQTAL----RQQEKIERyqadLEE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 773 EKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQtlnrALEEEGKQREVLRRGKAELEEQKRLLDrtvd 852
Cdd:PRK04863 360 LEERLEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQ----ALDVQQTRAIQYQQAVQALERAKQLCG---- 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 853 rlnkeLEKIGEDSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTA 932
Cdd:PRK04863 432 -----LPDLTADNAEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQLVRKIAGEVSRSEAWDVARELLRRLR 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 933 RLdkELLAQRLQGLEQ---EAENKKRSQDDRARQLKGLEEKVSR-------LETELDEEKNTVELLTDRVNRGRDQVDQL 1002
Cdd:PRK04863 507 EQ--RHLAEQLQQLRMrlsELEQRLRQQQRAERLLAEFCKRLGKnlddedeLEQLQEELEARLESLSESVSEARERRMAL 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1003 RTELMQERSARQDLEcdKISLE-RQNKDLKTRLasSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERK 1081
Cdd:PRK04863 585 RQQLEQLQARIQRLA--ARAPAwLAAQDALARL--REQSGEEFEDSQDVTEYMQQLLERERELTVERDELAARKQALDEE 660
|
....*
gi 16262452 1082 VKELS 1086
Cdd:PRK04863 661 IERLS 665
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
716-946 |
3.55e-03 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 41.60 E-value: 3.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 716 QRRAAVETTLRETQEENDEFRRRILGLEQQLKETRGL-VDGGEavEARLRDKLQRLE-AEK--QQLEEALNASQEEEGSL 791
Cdd:COG0497 165 RAWRALKKELEELRADEAERARELDLLRFQLEELEAAaLQPGE--EEELEEERRRLSnAEKlrEALQEALEALSGGEGGA 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 792 AAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNkELEKIgedskqalqq 871
Cdd:COG0497 243 LDLLGQALRALERLAEYDPSLAELAERLESALIELEEAASELRRYLDSLEFDPERLEEVEERLA-LLRRL---------- 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 872 lqaqledyKEKARREVADAQRQAKDWASEAEKTSGG---LSRLQDEIQRLRQALQA-----SQAERDTA-RLDKELLAQr 942
Cdd:COG0497 312 --------ARKYGVTVEELLAYAEELRAELAELENSderLEELEAELAEAEAELLEaaeklSAARKKAAkKLEKAVTAE- 382
|
....
gi 16262452 943 LQGL 946
Cdd:COG0497 383 LADL 386
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
396-593 |
3.73e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 41.42 E-value: 3.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 396 LEEKTEECSR-LQELLERRKGEAQQSNKELQNMKRLLDQGEDLRHGLETQVMELQNKLKHVQGPEPAKEVLLKDLLETRE 474
Cdd:pfam07888 32 LQNRLEECLQeRAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 475 LLEEVLEGKQRVEEQLRLRERELTALKGALKEEVASRDQEVEHVRQQYQRDTEQLRRSmqdatqdhavlEAERqkmsalv 554
Cdd:pfam07888 112 ELSEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEE-----------EAER------- 173
|
170 180 190
....*....|....*....|....*....|....*....
gi 16262452 555 RGLQRELEETSEETGHWQSMFQKNKEDLRATKQELLQLR 593
Cdd:pfam07888 174 KQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQ 212
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
705-1154 |
4.13e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 41.36 E-value: 4.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 705 MVAEAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKETrglvdggEAVEARLRDKLQRLEAEKQQLEEALNas 784
Cdd:pfam12128 237 MKIRPEFTKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEER-------QETSAELNQLLRTLDDQWKEKRDELN-- 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 785 qeeeGSLAAAKRALEARLEEAQRGLARLGQEQQTlnrALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNKELEKIGED 864
Cdd:pfam12128 308 ----GELSAADAAVAKDRSELEALEDQHGAFLDA---DIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRR 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 865 SKQALQQLQAQLEDYKEK--ARREVADAQRQAKDWASEA------EKTSGGLSRLQDEIQRLRQALQASQAERDTARLDK 936
Cdd:pfam12128 381 RSKIKEQNNRDIAGIKDKlaKIREARDRQLAVAEDDLQAleselrEQLEAGKLEFNEEEYRLKSRLGELKLRLNQATATP 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 937 ELLAQrlQGLEQEAENKKRSQDDRARQlkgleeKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRT---ELMQERSAR 1013
Cdd:pfam12128 461 ELLLQ--LENFDERIERAREEQEAANA------EVERLQSELRQARKRRDQASEALRQASRRLEERQSaldELELQLFPQ 532
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1014 QDLECDKISLERQN-KDLKTRLASSEGFQK----PSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERKVKELSIQ 1088
Cdd:pfam12128 533 AGTLLHFLRKEAPDwEQSIGKVISPELLHRtdldPEVWDGSVGGELNLYGVKLDLKRIDVPEWAASEEELRERLDKAEEA 612
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16262452 1089 IEDERQHVNDQKDQLSLRVKAL----------KRQVDEAEEEIERLDGLRKKAQREVEEQHEVNEQL-QARIKSLEK 1154
Cdd:pfam12128 613 LQSAREKQAAAEEQLVQANGELekasreetfaRTALKNARLDLRRLFDEKQSEKDKKNKALAERKDSaNERLNSLEA 689
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
793-1167 |
4.86e-03 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 41.15 E-value: 4.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 793 AAKRALEARLEEAQRGLARLgQEQQTLNRALEEEGKQREVLR-------RGKAEL-EEQKRLLDRTVDRLNKELEKIGED 864
Cdd:NF033838 62 EVESHLEKILSEIQKSLDKR-KHTQNVALNKKLSDIKTEYLYelnvlkeKSEAELtSKTKKELDAAFEQFKKDTLEPGKK 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 865 SkqalqqlqaqledykEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARldKELLAQRLQ 944
Cdd:NF033838 141 V---------------AEATKKVEEAEKKAKDQKEEDRRNYPTNTYKTLELEIAESDVEVKKAELELVK--EEAKEPRDE 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 945 GLEQEAENKKRSQDDRARQLKGLeeKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLEcdkiSLE 1024
Cdd:NF033838 204 EKIKQAKAKVESKKAEATRLEKI--KTDREKAEEEAKRRADAKLKEAVEKNVATSEQDKPKRRAKRGVLGEPA----TPD 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1025 RQNKDLKTRLASSEGFQKPSASLSQlesqnqllqerlqaeerEKTVLQSTNRKLERKVKELSIQIEDERQHVNDQKDQLS 1104
Cdd:NF033838 278 KKENDAKSSDSSVGEETLPSPSLKP-----------------EKKVAEAEKKVEEAKKKAKDQKEEDRRNYPTNTYKTLE 340
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1105 LRVKALKRQVDEAEEEI--ERLDGLR-----KKAQREVEEQHEVNEQLQaRIKSLEKDSWRKASRSAAES 1167
Cdd:NF033838 341 LEIAESDVKVKEAELELvkEEAKEPRneekiKQAKAKVESKKAEATRLE-KIKTDRKKAEEEAKRKAAEE 409
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
926-1154 |
4.87e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 40.28 E-value: 4.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 926 QAERDTARLDKELLAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLETELDEE-------KNTVELLTDRVNRGRDQ 998
Cdd:COG1340 14 EEKIEELREEIEELKEKRDELNEELKELAEKRDELNAQVKELREEAQELREKRDELnekvkelKEERDELNEKLNELREE 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 999 VDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLEsqnQLLQERLQAEEREKTVlqstnRKL 1078
Cdd:COG1340 94 LDELRKELAELNKAGGSIDKLRKEIERLEWRQQTEVLSPEEEKELVEKIKELE---KELEKAKKALEKNEKL-----KEL 165
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16262452 1079 ERKVKELSIQIEDERQHVN---DQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQREVEEQHEVNEQLQARIKSLEK 1154
Cdd:COG1340 166 RAELKELRKEAEEIHKKIKelaEEAQELHEEMIELYKEADELRKEADELHKEIVEAQEKADELHEEIIELQKELRELRK 244
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
883-1094 |
5.01e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.58 E-value: 5.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 883 ARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDDRAR 962
Cdd:COG3883 14 ADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERAR 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 963 QLKGLEEKVSRLETeLDEEKNTVELLtDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQK 1042
Cdd:COG3883 94 ALYRSGGSVSYLDV-LLGSESFSDFL-DRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKA 171
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 16262452 1043 P-SASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERKVKELSIQIEDERQ 1094
Cdd:COG3883 172 ElEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAA 224
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
719-932 |
5.75e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.58 E-value: 5.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 719 AAVETTLRETQEENDEFRRRILGLEQQLKETRGLVDggeaveaRLRDKLQRLEAEKQQLEEALNASQEEegsLAAAKRAL 798
Cdd:COG3883 19 QAKQKELSELQAELEAAQAELDALQAELEELNEEYN-------ELQAELEALQAEIDKLQAEIAEAEAE---IEERREEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 799 EARLEEAQRGLARLG---------------QEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTVDRLNKELEKIgE 863
Cdd:COG3883 89 GERARALYRSGGSVSyldvllgsesfsdflDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAEL-E 167
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16262452 864 DSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTA 932
Cdd:COG3883 168 AAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAA 236
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
790-1154 |
6.25e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.04 E-value: 6.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 790 SLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLdRTVDRLNKELEKIGEDSKQAL 869
Cdd:PLN02939 23 FYLPSRRRLAVSCRARRRGFSSQQKKKRGKNIAPKQRSSNSKLQSNTDENGQLENTSL-RTVMELPQKSTSSDDDHNRAS 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 870 QQLQAQLEDYKEkarrevadaQRQAKdwASEAEKTSGGlsRLQDEIQRLRQAlqasqaERDTARLDKellaQRLQGLEqE 949
Cdd:PLN02939 102 MQRDEAIAAIDN---------EQQTN--SKDGEQLSDF--QLEDLVGMIQNA------EKNILLLNQ----ARLQALE-D 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 950 AENKKRSQDDRARQLKGLEEKVSRLETELD---EEKNTVELLtdrvnrgRDQVDQLRTELMQERSArqdlecdkislerq 1026
Cdd:PLN02939 158 LEKILTEKEALQGKINILEMRLSETDARIKlaaQEKIHVEIL-------EEQLEKLRNELLIRGAT-------------- 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1027 nkdlktrlaSSEGFQKPSASLSQLESQNQLLQ-----------------ERLQAEEREKTVLQSTNRKLERKvkeLSIQI 1089
Cdd:PLN02939 217 ---------EGLCVHSLSKELDVLKEENMLLKddiqflkaelievaeteERVFKLEKERSLLDASLRELESK---FIVAQ 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1090 EDERQHVNDQKDQLSLRVKAL-------KRQVDEAEEEIERLDGLRKKAQREVEEQHEVN---------EQLQARIKSLE 1153
Cdd:PLN02939 285 EDVSKLSPLQYDCWWEKVENLqdlldraTNQVEKAALVLDQNQDLRDKVDKLEASLKEANvskfssykvELLQQKLKLLE 364
|
.
gi 16262452 1154 K 1154
Cdd:PLN02939 365 E 365
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
760-917 |
6.34e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 40.53 E-value: 6.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 760 EARLRDKLQRLEAEKQQLEEALNASQEEEgslaaakRALEARLEEAQRGLARLGQEQQTLNRALE-------EEGKQREV 832
Cdd:PRK12704 46 EAKKEAEAIKKEALLEAKEEIHKLRNEFE-------KELRERRNELQKLEKRLLQKEENLDRKLEllekreeELEKKEKE 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 833 LRRGKAELEEQKRLLDRTVDRLNKELEKI----GEDSKqalqqlQAQLEDYKEKARREvadAQRQAKDWASEAEKTSGGL 908
Cdd:PRK12704 119 LEQKQQELEKKEEELEELIEEQLQELERIsgltAEEAK------EILLEKVEEEARHE---AAVLIKEIEEEAKEEADKK 189
|
170
....*....|.
gi 16262452 909 SR--LQDEIQR 917
Cdd:PRK12704 190 AKeiLAQAIQR 200
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
699-900 |
7.15e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 40.53 E-value: 7.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 699 EASKAKMVAEAEATVLGQRRAAvettLRETQEENDEFRRRilgLEQQLKETRGLVdggEAVEARLRDKLQRLEAEKQQLE 778
Cdd:PRK12704 37 EEEAKRILEEAKKEAEAIKKEA----LLEAKEEIHKLRNE---FEKELRERRNEL---QKLEKRLLQKEENLDRKLELLE 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 779 EALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQrEVLRRGKAELEEQKRLLDRtvdrlnkel 858
Cdd:PRK12704 107 KREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISGLTAEEAKE-ILLEKVEEEARHEAAVLIK--------- 176
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 16262452 859 eKIGEDSKqalqqlqaqlEDYKEKARREVADA-QRQAKDWASE 900
Cdd:PRK12704 177 -EIEEEAK----------EEADKKAKEILAQAiQRCAADHVAE 208
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
607-831 |
7.26e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.20 E-value: 7.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 607 IEVLQRELEQARASAGDT-RQVEVLKKELLRTQEELKELQAERQsqevagrhrdrELEKQLAVLRVEADRGRELEEQNLQ 685
Cdd:COG3883 25 LSELQAELEAAQAELDALqAELEELNEEYNELQAELEALQAEID-----------KLQAEIAEAEAEIEERREELGERAR 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 686 LQKTLQQLRQDCEEASKAKMVAEaeatvLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRD 765
Cdd:COG3883 94 ALYRSGGSVSYLDVLLGSESFSD-----FLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEA 168
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16262452 766 KLQRLEAEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQRE 831
Cdd:COG3883 169 AKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAA 234
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
798-1124 |
7.30e-03 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 40.59 E-value: 7.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 798 LEARLEEAQRGLARLGQEQQTLnraLEEEGKQREVLRRGKAELEE-QKRLLDR------TVDRLNKELEKIgeDSKQALQ 870
Cdd:PRK04778 110 IESLLDLIEEDIEQILEELQEL---LESEEKNREEVEQLKDLYRElRKSLLANrfsfgpALDELEKQLENL--EEEFSQF 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 871 QLQAQLEDYkEKARREVADAQRQAKDWASEAEKTSGGLSRLQ----DEIQRLRQALQasQAERDTARLDKELLAQRLQGL 946
Cdd:PRK04778 185 VELTESGDY-VEAREILDQLEEELAALEQIMEEIPELLKELQtelpDQLQELKAGYR--ELVEEGYHLDHLDIEKEIQDL 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 947 EQEaeNKKRSQDDRARQLKGLEEKVSRLETELD----------EEKNTVEL----LTDRVNRGRDQVDQLRTELMQ---- 1008
Cdd:PRK04778 262 KEQ--IDENLALLEELDLDEAEEKNEEIQERIDqlydilerevKARKYVEKnsdtLPDFLEHAKEQNKELKEEIDRvkqs 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1009 ------ERSARQDLECDKISLERQNKDLKTRLASSEG--------FQKPSASLSQLESQNQLLQERLQA---EERE---- 1067
Cdd:PRK04778 340 ytlnesELESVRQLEKQLESLEKQYDEITERIAEQEIayselqeeLEEILKQLEEIEKEQEKLSEMLQGlrkDELEarek 419
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16262452 1068 ----KTVLQSTNRKLER--------KVKELSIQIEDERQHVNDQKDQLSLRVKALKRQVDEAEEEIERL 1124
Cdd:PRK04778 420 leryRNKLHEIKRYLEKsnlpglpeDYLEMFFEVSDEIEALAEELEEKPINMEAVNRLLEEATEDVETL 488
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
977-1168 |
7.95e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 40.44 E-value: 7.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 977 ELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERsarQDLECDKISLERQnKDLKTRLASSEGFQKpSASLSQLESQNQL 1056
Cdd:TIGR02169 167 EFDRKKEKALEELEEVEENIERLDLIIDEKRQQL---ERLRREREKAERY-QALLKEKREYEGYEL-LKEKEALERQKEA 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1057 LQERLQAEEREKTVLQSTNRKLERKVKELSIQIEDERQHVNDQKDQLSLRVKA-----------LKRQVDEAEEEIERLD 1125
Cdd:TIGR02169 242 IERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEkigeleaeiasLERSIAEKERELEDAE 321
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 16262452 1126 GLRKKAQ--------------REVEEQHEVNEQLQARIKSLEKDSWRKASRSAAESA 1168
Cdd:TIGR02169 322 ERLAKLEaeidkllaeieeleREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDK 378
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
370-982 |
9.35e-03 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 40.42 E-value: 9.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 370 ELQRKLDEEVKKRQKLEPSQVGLERQLEEKTEECSRLQELLERRKGEAQQSNKelqNMKRLLDQGEDLRHGLETQVMELQ 449
Cdd:TIGR00606 416 DLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEG---SSDRILELDQELRKAERELSKAEK 492
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 450 NKLKhvqgpepakEVLLKDLLETRELLEEVLEGKQRVEEQLRLRERELTALKG--ALKEEVASRDQEVEHVRQQYQRDTE 527
Cdd:TIGR00606 493 NSLT---------ETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQmeMLTKDKMDKDEQIRKIKSRHSDELT 563
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 528 QLRRSMQDATQDHAVLEA---ERQKMSALVRGLQRELEETSEETGHWQSMFQKNKEDLRATKQELLQLrmekeEMEEELG 604
Cdd:TIGR00606 564 SLLGYFPNKKQLEDWLHSkskEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDV-----CGSQDEE 638
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 605 EKIEVLQRELEQAR--------ASAGDTRQVEVLKKE----------LLRTQEELKELQAERQSQEVAGRHRDRELEKQL 666
Cdd:TIGR00606 639 SDLERLKEEIEKSSkqramlagATAVYSQFITQLTDEnqsccpvcqrVFQTEAELQEFISDLQSKLRLAPDKLKSTESEL 718
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 667 AVLRVEAD--------RGRELEEQNLQLQKTLQQLRQDCEEASKAKMVAEAEATVLGQRRAAVE---------TTLRETQ 729
Cdd:TIGR00606 719 KKKEKRRDemlglapgRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEEsakvcltdvTIMERFQ 798
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 730 EENDEFRRRIlglEQQLKETRGlVDGGEAVE---ARLRDKLQRLEAEKQQLEEALNASQEEEGSLAAAKRALE------- 799
Cdd:TIGR00606 799 MELKDVERKI---AQQAAKLQG-SDLDRTVQqvnQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNelksekl 874
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 800 ------ARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAEL-----------EEQKRLLDRTVDRLNKELEKIG 862
Cdd:TIGR00606 875 qigtnlQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDqqekeelisskETSNKKAQDKVNDIKEKVKNIH 954
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 863 EDSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGGL--------------SRLQDEIQRLRQALQASQAE 928
Cdd:TIGR00606 955 GYMKDIENKIQDGKDDYLKQKETELNTVNAQLEECEKHQEKINEDMrlmrqdidtqkiqeRWLQDNLTLRKRENELKEVE 1034
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 16262452 929 RDTARLDKEL-------LAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLETELDEEK 982
Cdd:TIGR00606 1035 EELKQHLKEMgqmqvlqMKQEHQKLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELREPQ 1095
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
889-1171 |
9.70e-03 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 40.22 E-value: 9.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 889 DAQRQAKDWASEAEKTSGGlsRLQDEIQRLRQalQASQAERDTARLDKELLAQRLQGLEQEAENKKRSqddrARQLKGLE 968
Cdd:PLN03229 414 DPERKVNMKKREAVKTPVR--ELEGEVEKLKE--QILKAKESSSKPSELALNEMIEKLKKEIDLEYTE----AVIAMGLQ 485
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 969 EKVSRLETELDEEKNTVELLTDRVnrgRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASsegfQKPSASLS 1048
Cdd:PLN03229 486 ERLENLREEFSKANSQDQLMHPVL---MEKIEKLKDEFNKRLSRAPNYLSLKYKLDMLNEFSRAKALS----EKKSKAEK 558
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 1049 QLESQNQLLQERLQAEErektvlqstnrkLERKVKELSIQIEDERQHVNDQKDqlslrvKALKRQVDEAEEEIE------ 1122
Cdd:PLN03229 559 LKAEINKKFKEVMDRPE------------IKEKMEALKAEVASSGASSGDELD------DDLKEKVEKMKKEIElelagv 620
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 16262452 1123 ------RLDGLRKKAQREVEEQheVNEQLQARIKSLEKDSWRKASRSAAESALKN 1171
Cdd:PLN03229 621 lksmglEVIGVTKKNKDTAEQT--PPPNLQEKIESLNEEINKKIERVIRSSDLKS 673
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
363-863 |
9.71e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 40.00 E-value: 9.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 363 ELTRKVEELQRKLDEEVKKRQKLEPSQVGLERQLEEKTEECSRLQELLERRKGEAQQSNKELQNMKRLLDQGEDLRHGLE 442
Cdd:TIGR04523 215 SLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLK 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 443 TQVMELQNKlkhvqgpepAKEVLLKDlletrelleevlegkqrVEEQLRLRERELTALKGALKEEvasrdqevEHVRQQY 522
Cdd:TIGR04523 295 SEISDLNNQ---------KEQDWNKE-----------------LKSELKNQEKKLEEIQNQISQN--------NKIISQL 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 523 QRDTEQLRRSMQDATQDHAVLEAERQKMSALVRGLQRELEETSEEtghwqsmfqknKEDLRATKQELLQLRMEKEEMEEE 602
Cdd:TIGR04523 341 NEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQE-----------IKNLESQINDLESKIQNQEKLNQQ 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 603 LGEKIEVLQRELEQARasagdtRQVEVLKKELLRTQEELKELQAERQSQEVAGRHRDR---ELEKQLAVLRveadrgREL 679
Cdd:TIGR04523 410 KDEQIKKLQQEKELLE------KEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNtreSLETQLKVLS------RSI 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 680 EEQNLQLQKTLQQLRQDCEEASKAKmvaeAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKEtrglvdggeav 759
Cdd:TIGR04523 478 NKIKQNLEQKQKELKSKEKELKKLN----EEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISD----------- 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 760 earLRDKLQRLEAE--KQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGK 837
Cdd:TIGR04523 543 ---LEDELNKDDFElkKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKEL 619
|
490 500
....*....|....*....|....*.
gi 16262452 838 AELEEQKRLLDRTVDRLNKELEKIGE 863
Cdd:TIGR04523 620 EKAKKENEKLSSIIKNIKSKKNKLKQ 645
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
766-941 |
9.74e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 39.14 E-value: 9.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 766 KLQRLEAEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEgkqREVLRRGKAELEEQKR 845
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEV---EARIKKYEEQLGNVRN 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16262452 846 LldRTVDRLNKELEKIgEDSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEKTsggLSRLQDEIQRLRQALQAS 925
Cdd:COG1579 88 N--KEYEALQKEIESL-KRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEK---KAELDEELAELEAELEEL 161
|
170
....*....|....*...
gi 16262452 926 QAERD--TARLDKELLAQ 941
Cdd:COG1579 162 EAEREelAAKIPPELLAL 179
|
|
| |
