|
Name |
Accession |
Description |
Interval |
E-value |
| Cadherin_repeat |
cd11304 |
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
274-343 |
5.69e-10 |
|
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers.
Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 56.94 E-value: 5.69e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1695091487 274 IYAEDGDRGINQPIIYSIFRGNVNGTFIIHPDSGNLTVARSVP--SPMTFLLLVKGQ-QADLARYSVTQVTVE 343
Cdd:cd11304 19 VSATDPDSGENGEVTYSIVSGNEDGLFSIDPSTGEITTAKPLDreEQSSYTLTVTATdGGGPPLSSTATVTIT 91
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
452-651 |
8.90e-10 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 63.03 E-value: 8.90e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 452 SEQEPPSTDVPPS----PEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENs 527
Cdd:PHA03247 2669 RLGRAAQASSPPQrprrRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAG- 2747
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 528 tshqPATPGGDTAQTPKPGTSQPMPPG--VGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPA-TPGGGTAQT 604
Cdd:PHA03247 2748 ----PATPGGPARPARPPTTAGPPAPAppAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLApAAALPPAAS 2823
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1695091487 605 PEAG-----TSQPMPPGMGTSTSHQPTTPGGGTA------QTPEPGTSQPMPLSKSTP 651
Cdd:PHA03247 2824 PAGPlppptSAQPTAPPPPPGPPPPSLPLGGSVApggdvrRRPPSRSPAAKPAAPARP 2881
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
451-653 |
6.79e-09 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 59.95 E-value: 6.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 451 VSEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENSTSH 530
Cdd:PHA03247 2602 VDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQ 2681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 531 QPATPG--------GDTAQTPKPG-TSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPggGT 601
Cdd:PHA03247 2682 RPRRRAarptvgslTSLADPPPPPpTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARP--AR 2759
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1695091487 602 AQTPeAGTSQPMPPGmGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTPSS 653
Cdd:PHA03247 2760 PPTT-AGPPAPAPPA-APAAGPPRRLTRPAVASLSESRESLPSPWDPADPPA 2809
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
457-730 |
4.75e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 57.26 E-value: 4.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 457 PSTDVPPSPEAGGTTGPWTSTTSEVPRPPEpsqgPSTTSSGGGTGPHPPsgTTLRPPTSSTPGGPPGAENSTSHQPATPG 536
Cdd:PHA03247 2717 SATPLPPGPAAARQASPALPAAPAPPAVPA----GPATPGGPARPARPP--TTAGPPAPAPPAAPAAGPPRRLTRPAVAS 2790
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 537 GDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQT-PEPGTSQPMPPSMGTSTSHQPATPGGGTAqtPEAGTSQPMPP 615
Cdd:PHA03247 2791 LSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPlPPPTSAQPTAPPPPPGPPPPSLPLGGSVA--PGGDVRRRPPS 2868
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 616 GmgtSTSHQPTTPgggtAQTPEPGTSQPmPLSKSTPSSGGGPSEDKRFSVVDMAALGGVLGALLLLALLGLAVLVHKHYG 695
Cdd:PHA03247 2869 R---SPAAKPAAP----ARPPVRRLARP-AVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQ 2940
|
250 260 270
....*....|....*....|....*....|....*
gi 1695091487 696 PRLKCCCGKAPEPQPQGFDNQAFLPDHKANWAPVP 730
Cdd:PHA03247 2941 PPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVP 2975
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
462-643 |
2.65e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 54.61 E-value: 2.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 462 PPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENSTSHQPATPGGDTAQ 541
Cdd:PRK07764 590 PAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGW 669
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 542 TPKPGTSQPMPPGvGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTAQTPEAGTSQPMPP------ 615
Cdd:PRK07764 670 PAKAGGAAPAAPP-PAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPpepddp 748
|
170 180 190
....*....|....*....|....*....|.
gi 1695091487 616 ---GMGTSTSHQPTTPGGGTAQTPEPGTSQP 643
Cdd:PRK07764 749 pdpAGAPAQPPPPPAPAPAAAPAAAPPPSPP 779
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
456-652 |
3.48e-07 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 54.15 E-value: 3.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 456 PPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEpSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENSTSHQP--- 532
Cdd:pfam05109 593 PTVGETSPQANTTNHTLGGTSSTPVVTSPPK-NATSAVTTGQHNITSSSTSSMSLRPSSISETLSPSTSDNSTSHMPllt 671
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 533 -ATPGG------------------DTAQTPKPGT-SQPMPPGvGTSTSHQPATPSGgTAQTPEPGTSQPMPPSmGTSTSH 592
Cdd:pfam05109 672 sAHPTGgenitqvtpaststhhvsTSSPAPRPGTtSQASGPG-NSSTSTKPGEVNV-TKGTPPKNATSPQAPS-GQKTAV 748
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 593 QPATPGGGTAQTPEAGTSQPmppGMGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTPS 652
Cdd:pfam05109 749 PTVTSTGGKANSTTGGKHTT---GHGARTSTEPTTDYGGDSTTPRTRYNATTYLPPSTSS 805
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
456-657 |
3.71e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 54.17 E-value: 3.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 456 PPSTD--VPPSPEAGGTTGPwtSTTSEVPRPPEPSQGPSTTSSGGGTGPHP-PSGTTLRPPTSSTPGGPPGAENSTSHQP 532
Cdd:PHA03247 2561 PAAPDrsVPPPRPAPRPSEP--AVTSRARRPDAPPQSARPRAPVDDRGDPRgPAPPSPLPPDTHAPDPPPPSPSPAANEP 2638
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 533 ATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTS-HQPATPGGGTAQTPEAGTSQ 611
Cdd:PHA03247 2639 DPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSlADPPPPPPTPEPAPHALVSA 2718
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1695091487 612 -PMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPM-PLSKSTPSSGGGP 657
Cdd:PHA03247 2719 tPLPPGPAAARQASPALPAAPAPPAVPAGPATPGgPARPARPPTTAGP 2766
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
447-659 |
3.82e-07 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 53.92 E-value: 3.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 447 IEIQVSEQEPPSTDVPPSPEAGGTTGPWT--STTSEVP----RPPEPSQGPSTTSSGGGTGPHP--PSGTTLRPPTSSTP 518
Cdd:PHA03378 572 LQIQPLTSPTTSQLASSAPSYAQTPWPVPhpSQTPEPPttqsHIPETSAPRQWPMPLRPIPMRPlrMQPITFNVLVFPTP 651
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 519 GGPPGAENS-----------TSHQPATPGGDTAQTPK--PGTSQP-------MPPGVGTSTSHQPATPSGGTAQTPE--P 576
Cdd:PHA03378 652 HQPPQVEITpykptwtqighIPYQPSPTGANTMLPIQwaPGTMQPppraptpMRPPAAPPGRAQRPAAATGRARPPAaaP 731
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 577 GTSQP-------MPPSMGTSTSHQPATPGGGTAQTPEA--GTSQPMPPGMGTSTSHQptTPGGGTAQTPEP-GTSQPMPL 646
Cdd:PHA03378 732 GRARPpaaapgrARPPAAAPGRARPPAAAPGRARPPAAapGAPTPQPPPQAPPAPQQ--RPRGAPTPQPPPqAGPTSMQL 809
|
250
....*....|...
gi 1695091487 647 SKSTPSSGGGPSE 659
Cdd:PHA03378 810 MPRAAPGQQGPTK 822
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
457-659 |
4.09e-07 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 53.92 E-value: 4.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 457 PSTDVPPSPEAGGTTGPWTSTtsevprPPEPSQGPSTTSSGGGTGPHPPsGTTLRPPTSSTPGGPPGA--------ENST 528
Cdd:PHA03378 649 PTPHQPPQVEITPYKPTWTQI------GHIPYQPSPTGANTMLPIQWAP-GTMQPPPRAPTPMRPPAAppgraqrpAAAT 721
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 529 SHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPE--PGTSQPMPPSMGTSTSHQPATPGGGTAQTPE 606
Cdd:PHA03378 722 GRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAaaPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQ 801
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1695091487 607 AG-----TSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKS-----TPSSGGGPSE 659
Cdd:PHA03378 802 AGptsmqLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSLKKPAALERQaaagpTPSPGSGTSD 864
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
442-654 |
5.62e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.79 E-value: 5.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 442 TATTVIEIQVSEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPsqgPSTTSSGGGTGPHP-PSGTTLRPPTSSTPGG 520
Cdd:PHA03247 2784 TRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLP---PPTSAQPTAPPPPPgPPPPSLPLGGSVAPGG 2860
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 521 PPGAENSTSHQPATPGGDT---------AQTPKPGTSQPMPPgVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTS 591
Cdd:PHA03247 2861 DVRRRPPSRSPAAKPAAPArppvrrlarPAVSRSTESFALPP-DQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRP 2939
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1695091487 592 HQPATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTpgggTAQTPEPGTSQPMPLSKSTPSSG 654
Cdd:PHA03247 2940 QPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVP----RFRVPQPAPSREAPASSTPPLTG 2998
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
456-658 |
8.57e-07 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 52.85 E-value: 8.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 456 PPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGT---------GPHPPSGTTLRPPTSSTPGGPPGAEN 526
Cdd:pfam03154 182 SPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAphtliqqtpTLHPQRLPSPHPPLQPMTQPPPPSQV 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 527 STS-------HQPATPGGDTAQTPKPGTSQPMPPgvgtstshQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPatPGG 599
Cdd:pfam03154 262 SPQplpqpslHGQMPPMPHSLQTGPSHMQHPVPP--------QPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTP--PSQ 331
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1695091487 600 GTAQTPEAGTSQPMPPGmGTSTSHQPTTPGGGTAQTPEPgTSQPMPLSKSTPSSGGGPS 658
Cdd:pfam03154 332 SQLQSQQPPREQPLPPA-PLSMPHIKPPPTTPIPQLPNP-QSHKHPPHLSGPSPFQMNS 388
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
456-736 |
9.90e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.02 E-value: 9.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 456 PPSTDVP------PSPEAGGTTGPWTSTTSEVPRP---PEPSQGPSTTSSGGGTGPHPPSGTTLR--------------- 511
Cdd:PHA03247 2618 PPDTHAPdppppsPSPAANEPDPHPPPTVPPPERPrddPAPGRVSRPRRARRLGRAAQASSPPQRprrraarptvgslts 2697
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 512 ----PPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPgTSQPMPPGVGTStshqPATPSGGTAQTPEPGTSQPMPPS-- 585
Cdd:PHA03247 2698 ladpPPPPPTPEPAPHALVSATPLPPGPAAARQASPAL-PAAPAPPAVPAG----PATPGGPARPARPPTTAGPPAPApp 2772
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 586 MGTSTSHQPATPGGGTAQTPEAGTSQPMPPGMGTSTS----HQPTTPGGGTAQTPEPGTSQPMPLSKSTPSSGGGPSEDK 661
Cdd:PHA03247 2773 AAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAavlaPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPL 2852
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1695091487 662 RFSVVDMAALGGVLGALLLLALLGLAVLVHKHYGPRLKccCGKAPEPQPQGFDNQAFLPDHKANWAPVPSPTHDP 736
Cdd:PHA03247 2853 GGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPA--VSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPP 2925
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
417-658 |
1.11e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 52.63 E-value: 1.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 417 LTTTTLAQAGAFYAEVEAHNTVTSGTATTVIEIQVSEQEPPSTDVPPSPEAggTTGPWTSTTSEVPRPPEPSQGPSTTSS 496
Cdd:PHA03247 2721 LPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAP--PAAPAAGPPRRLTRPAVASLSESRESL 2798
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 497 GGGTGPHPPSGTTLRPPTSSTPGGPPGAenstshqPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATP--SGGTAQTP 574
Cdd:PHA03247 2799 PSPWDPADPPAAVLAPAAALPPAASPAG-------PLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDvrRRPPSRSP 2871
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 575 EPGTSQPMPPSMGTSTSHQPATPGGGTAQTPEAGTSQPMPPGMGTSTSH-QPTTPGGGTAQTPEPGTSQPMPLSKSTPSS 653
Cdd:PHA03247 2872 AAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQpQPPPPPQPQPPPPPPPRPQPPLAPTTDPAG 2951
|
....*
gi 1695091487 654 GGGPS 658
Cdd:PHA03247 2952 AGEPS 2956
|
|
| CA |
smart00112 |
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
276-314 |
3.26e-06 |
|
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium.
Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 45.80 E-value: 3.26e-06
10 20 30
....*....|....*....|....*....|....*....
gi 1695091487 276 AEDGDRGINQPIIYSIFRGNVNGTFIIHPDSGNLTVARS 314
Cdd:smart00112 2 ATDADSGENGKVTYSILSGNDDGLFSIDPETGEITTTKP 40
|
|
| Cadherin_repeat |
cd11304 |
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
37-120 |
4.37e-06 |
|
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers.
Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 45.77 E-value: 4.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 37 FEVEENTNVTEPLVDIHV-----PEGQEVT--LGALSTPFAFRIQGN--QLFLNVTPDYEEKSLLEAQLLCQSGGT--LV 105
Cdd:cd11304 4 VSVPENAPPGTVVLTVSAtdpdsGENGEVTysIVSGNEDGLFSIDPStgEITTAKPLDREEQSSYTLTVTATDGGGppLS 83
|
90
....*....|....*
gi 1695091487 106 TQLRVFVSVLDVNDN 120
Cdd:cd11304 84 STATVTITVLDVNDN 98
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
416-623 |
4.39e-06 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 50.14 E-value: 4.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 416 VLTTTTLAQAGAFYAEVEAHNTVTSGTATTVIEIQVSEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTS 495
Cdd:COG3469 16 SATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAAATSTSAT 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 496 SGGGTGPHPPSGTTLRPPTSSTPGGPPGaeNSTSHQPATPGGDTAQTPKPGTSqpmppGVGTSTSHQPATPSGGTAQTPE 575
Cdd:COG3469 96 LVATSTASGANTGTSTVTTTSTGAGSVT--STTSSTAGSTTTSGASATSSAGS-----TTTTTTVSGTETATGGTTTTST 168
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1695091487 576 PGTSQPMPPSMGTSTSHQPATPGGGTAqTPEAGTSQPMPPGMGTSTSH 623
Cdd:COG3469 169 TTTTTSASTTPSATTTATATTASGATT-PSATTTATTTGPPTPGLPKH 215
|
|
| Cadherin |
pfam00028 |
Cadherin domain; |
253-343 |
6.77e-06 |
|
Cadherin domain;
Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 44.98 E-value: 6.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 253 YHGAVPTGhILPSPLVLRpgpIYAEDGDRGINQPIIYSIFRGNVNGTFIIHPDSGNLTVARSV--PSPMTFLLLVKGQQA 330
Cdd:pfam00028 1 YSASVPEN-APVGTEVLT---VTATDPDLGPNGRIFYSILGGGPGGNFRIDPDTGDISTTKPLdrESIGEYELTVEATDS 76
|
90
....*....|....
gi 1695091487 331 DL-ARYSVTQVTVE 343
Cdd:pfam00028 77 GGpPLSSTATVTIT 90
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
480-659 |
7.07e-06 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 49.77 E-value: 7.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 480 EVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSt 559
Cdd:pfam03154 175 QAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTLHPQRLPSPHPPLQPMT- 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 560 shQPATPSGGTAQ-TPEPGTSQPMPPsmgtstshQPATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPgggtaQTPEP 638
Cdd:pfam03154 254 --QPPPPSQVSPQpLPQPSLHGQMPP--------MPHSLQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGP-----SPAAP 318
|
170 180
....*....|....*....|....
gi 1695091487 639 GTSQPM---PLSKSTPSSGGGPSE 659
Cdd:pfam03154 319 GQSQQRihtPPSQSQLQSQQPPRE 342
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
437-636 |
1.27e-05 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 49.14 E-value: 1.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 437 TVTSGTATTVIEIQVSEQEPPSTDVPPSPEAGGTTGPWTST----TSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTlRP 512
Cdd:pfam05109 406 TRTATNATTTTHKVIFSKAPESTTTSPTLNTTGFAAPNTTTglpsSTHVPTNLTAPASTGPTVSTADVTSPTPAGTT-SG 484
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 513 PTSSTPGGPPGAENSTSHQP--------ATPGGDTAQTPKPGTSQPMP----PGVGTSTSHQPATPSGGTAQTPEPGTSQ 580
Cdd:pfam05109 485 ASPVTPSPSPRDNGTESKAPdmtsptsaVTTPTPNATSPTPAVTTPTPnatsPTLGKTSPTSAVTTPTPNATSPTPAVTT 564
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 581 PMP----PSMGTSTSHQPATPGGGTAQTPEAGTSQPmppgMGTSTSHQPttpgGGTAQTP 636
Cdd:pfam05109 565 PTPnatiPTLGKTSPTSAVTTPTPNATSPTVGETSP----QANTTNHTL----GGTSSTP 616
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
457-667 |
1.87e-05 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 48.38 E-value: 1.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 457 PSTDVPPsPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTT----LRPPTSSTPGGPPGAENSTSHQP 532
Cdd:PLN03209 324 PSQRVPP-KESDAADGPKPVPTKPVTPEAPSPPIEEEPPQPKAVVPRPLSPYTayedLKPPTSPIPTPPSSSPASSKSVD 402
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 533 ATPGGDTAQT-PKPGTSQPMP---PGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPS-MGTSTSHQPATPG-GGTAQTPE 606
Cdd:PLN03209 403 AVAKPAEPDVvPSPGSASNVPevePAQVEAKKTRPLSPYARYEDLKPPTSPSPTAPTgVSPSVSSTSSVPAvPDTAPATA 482
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1695091487 607 AGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTPSSGGGPSEDKRFSVVD 667
Cdd:PLN03209 483 ATDAAAPPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALAD 543
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
504-619 |
2.12e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.44 E-value: 2.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 504 PPSGTTLRPPTSSTPGGPPGAENSTSHQPATPggDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMP 583
Cdd:PRK07764 398 APSAAAAAPAAAPAPAAAAPAAAAAPAPAAAP--QPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPE 475
|
90 100 110
....*....|....*....|....*....|....*.
gi 1695091487 584 PSMGTSTSHQPATPGGGTAQTPEAGTSQPMPPGMGT 619
Cdd:PRK07764 476 PTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAAT 511
|
|
| PRK14959 |
PRK14959 |
DNA polymerase III subunits gamma and tau; Provisional |
510-630 |
2.46e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184923 [Multi-domain] Cd Length: 624 Bit Score: 47.75 E-value: 2.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 510 LRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPM---PPGVGTSTSHQPATPSGGTAQTPEP--GTSQPMPP 584
Cdd:PRK14959 365 LMPVESLRPSGGGASAPSGSAAEGPASGGAATIPTPGTQGPQgtaPAAGMTPSSAAPATPAPSAAPSPRVpwDDAPPAPP 444
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1695091487 585 SMGTSTSHQPATPGGGTAQTPEAGTSQP--MPPGMGTSTSHQPTTPGG 630
Cdd:PRK14959 445 RSGIPPRPAPRMPEASPVPGAPDSVASAsdAPPTLGDPSDTAEHTPSG 492
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
453-663 |
2.66e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 47.95 E-value: 2.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 453 EQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPE-----PSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENS 527
Cdd:PRK12323 371 GAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAapaaaPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAP 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 528 TSHQPATPggdtAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPE-PGTSQPMPPSMGTSTSHQ--PATPGGGTAQT 604
Cdd:PRK12323 451 APAPAAAP----AAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDdPPPWEELPPEFASPAPAQpdAAPAGWVAESI 526
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1695091487 605 PEAGTSQPMPPGmgtstshqPTTPGGGTAQTPEPGTSQPMPLSKSTPSSGGGPSEDKRF 663
Cdd:PRK12323 527 PDPATADPDDAF--------ETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMF 577
|
|
| CA |
smart00112 |
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
71-122 |
3.52e-05 |
|
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium.
Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 42.72 E-value: 3.52e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1695091487 71 FRI--QGNQLFLNVTPDYEEKSLLEAQLLCQSGGT--LVTQLRVFVSVLDVNDNAP 122
Cdd:smart00112 26 FSIdpETGEITTTKPLDREEQPEYTLTVEATDGGGppLSSTATVTITVLDVNDNAP 81
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
508-651 |
5.91e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 46.90 E-value: 5.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 508 TTLRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPAtpsggtaQTPEPGTSQPMPPSMG 587
Cdd:PRK07764 376 ARLERLERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPA-------PAPAPAPAPPSPAGNA 448
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1695091487 588 TSTSHQPATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTP 651
Cdd:PRK07764 449 PAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATL 512
|
|
| PRK11901 |
PRK11901 |
hypothetical protein; Reviewed |
514-658 |
6.28e-05 |
|
hypothetical protein; Reviewed
Pssm-ID: 237015 [Multi-domain] Cd Length: 327 Bit Score: 45.83 E-value: 6.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 514 TSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTsqpMPPGVGTSTSHQPATPSGGTAQTPEPGT-----SQ------PM 582
Cdd:PRK11901 87 LSSGNQSSPSAANNTSDGHDASGVKNTAPPQDIS---APPISPTPTQAAPPQTPNGQQRIELPGNisdalSQqqgqvnAA 163
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1695091487 583 PPSMGTSTSHQP---ATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPgggtaqTPEPGTSQPmPLSKSTPSSGGGPS 658
Cdd:PRK11901 164 SQNAQGNTSTLPtapATVAPSKGAKVPATAETHPTPPQKPATKKPAVNH------HKTATVAVP-PATSGKPKSGAASA 235
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
450-616 |
6.77e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 46.70 E-value: 6.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 450 QVSEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENSTS 529
Cdd:PHA03307 271 EASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRS 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 530 HQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTAQTPEAGT 609
Cdd:PHA03307 351 PSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARY 430
|
....*..
gi 1695091487 610 SQPMPPG 616
Cdd:PHA03307 431 PLLTPSG 437
|
|
| PRK13700 |
PRK13700 |
conjugal transfer protein TraD; Provisional |
544-620 |
9.25e-05 |
|
conjugal transfer protein TraD; Provisional
Pssm-ID: 184256 [Multi-domain] Cd Length: 732 Bit Score: 46.11 E-value: 9.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 544 KPGTSQPMPPGVGTSTSHQPATPSGGTAQTPePGTSQPMPPSMG-TSTSHQPATPGGGT----AQTPEAGTSQPMPPGMG 618
Cdd:PRK13700 604 EPDVPEVASGEDVTQAEQPQQPQQPQQPQQP-QQPQQPVSPVINdKKSDAGVNVPAGGIeqelKMKPEEEMEQQLPPGIS 682
|
..
gi 1695091487 619 TS 620
Cdd:PRK13700 683 ES 684
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
456-658 |
1.11e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 46.08 E-value: 1.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 456 PPSTDVPPSPEAGGTTGP-----WTSTTSEVPRPPEpsqgpsttssgggtgpHPPSGTTLRPPTSSTPggPPGAENSTS- 529
Cdd:PHA03247 310 PAPPDPPPPAPAGDAEEEddedgAMEVVSPLPRPRQ----------------HYPLGFPKRRRPTWTP--PSSLEDLSAg 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 530 --HQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTP-EPGTSQPMPPSmgTSTSHQPATPGGGTAQTPE 606
Cdd:PHA03247 372 rhHPKRASLPTRKRRSARHAATPFARGPGGDDQTRPAAPVPASVPTPaPTPVPASAPPP--PATPLPSAEPGSDDGPAPP 449
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1695091487 607 AGTSQPMPPGMGTSTSHQPTTPGG----GTAQTPEPGTSQPMPLSKSTPSSGGGPS 658
Cdd:PHA03247 450 PERQPPAPATEPAPDDPDDATRKAldalRERRPPEPPGADLAELLGRHPDTAGTVV 505
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
448-667 |
1.36e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.93 E-value: 1.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 448 EIQVSEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENS 527
Cdd:PHA03307 84 SRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVA 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 528 TSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEP-----GTSQPMPPSM-----GTSTSHQPATP 597
Cdd:PHA03307 164 SDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPisasaSSPAPAPGRSaaddaGASSSDSSSSE 243
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1695091487 598 GGGTAQTPEAGTSQPMPPGMGTST---SHQPTTPGGGTAQTPEPGTSQPMPLSKSTPSSGGGPSEDKRFSVVD 667
Cdd:PHA03307 244 SSGCGWGPENECPLPRPAPITLPTriwEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASS 316
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
441-650 |
1.38e-04 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 45.84 E-value: 1.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 441 GTATTVIEIQVSEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEpSQGPSTTSSGGGTGPHPPSGTtlRPPTSSTPGG 520
Cdd:PTZ00449 547 GKPGETKEGEVGKKPGPAKEHKPSKIPTLSKKPEFPKDPKHPKDPE-EPKKPKRPRSAQRPTRPKSPK--LPELLDIPKS 623
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 521 PPGAENSTS-------HQPATP----GGDTAQTPKPGTSqPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTS 589
Cdd:PTZ00449 624 PKRPESPKSpkrppppQRPSSPerpeGPKIIKSPKPPKS-PKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESI 702
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1695091487 590 TSHQPATPGGGTAQTPeagtsQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKST 650
Cdd:PTZ00449 703 LKETLPETPGTPFTTP-----RPLPPKLPRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERT 758
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
456-628 |
1.40e-04 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 45.30 E-value: 1.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 456 PPSTDVPPSPEAGGTTGPWTSTTSEVPRPPePSQGPSTTSSGGGTGPHPPSGTT----LRPPTSSTPGGPPGAENSTSHQ 531
Cdd:PLN03209 390 PPSSSPASSKSVDAVAKPAEPDVVPSPGSA-SNVPEVEPAQVEAKKTRPLSPYAryedLKPPTSPSPTAPTGVSPSVSST 468
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 532 PATPG-GDTA--------QTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTA 602
Cdd:PLN03209 469 SSVPAvPDTApataatdaAAPPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHA 548
|
170 180
....*....|....*....|....*..
gi 1695091487 603 Q-TPEAGTSQPMPPGMGTSTSHQPTTP 628
Cdd:PLN03209 549 QpKPRPLSPYTMYEDLKPPTSPTPSPV 575
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
514-656 |
2.03e-04 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 43.74 E-value: 2.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 514 TSSTP-----GGPPGAENSTSHQPATPGGDTAQTP-KPGTSQPMPPGVGTSTSHQPATpSGGTAQTPEPGTSQPMPPSMG 587
Cdd:PHA03255 25 TSSGSstasaGNVTGTTAVTTPSPSASGPSTNQSTtLTTTSAPITTTAILSTNTTTVT-STGTTVTPVPTTSNASTINVT 103
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1695091487 588 TSTSHQ--PATPGGGTAQTPEAGTSQPMPPGMGTSTSH-------QPTTPGGGTAQTPEPGTSQPMPLSKSTPSSGGG 656
Cdd:PHA03255 104 TKVTAQniTATEAGTGTSTGVTSNVTTRSSSTTSATTRitnattlAPTLSSKGTSNATKTTAELPTVPDERQPSLSYG 181
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
476-660 |
2.91e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.78 E-value: 2.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 476 STTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTL----------RPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKP 545
Cdd:PHA03307 62 CDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLApasparegspTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPV 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 546 GTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTAqtPEAGTSQPMPPGMGTSTSHQP 625
Cdd:PHA03307 142 GSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTP--PAAASPRPPRRSSPISASASS 219
|
170 180 190
....*....|....*....|....*....|....*
gi 1695091487 626 TTPGGGTAQTPEPGTSQPMPLSKSTPSSGGGPSED 660
Cdd:PHA03307 220 PAPAPGRSAADDAGASSSDSSSSESSGCGWGPENE 254
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
420-657 |
3.42e-04 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 44.52 E-value: 3.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 420 TTLAQAGAFYAEVEAHNTVTSGTATTVIEIQVSEQEPPSTDVPPSPEAGGTTGPWTST------------TSEVPRPPEP 487
Cdd:pfam05109 413 TTTTHKVIFSKAPESTTTSPTLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTadvtsptpagttSGASPVTPSP 492
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 488 SQGPSTTSSGGGTGPHPPSGTTLRPP--TSSTPGGPPGAENSTSHQPATPGGDTA-QTPKPGTSQPMpPGVGTSTSHQPA 564
Cdd:pfam05109 493 SPRDNGTESKAPDMTSPTSAVTTPTPnaTSPTPAVTTPTPNATSPTLGKTSPTSAvTTPTPNATSPT-PAVTTPTPNATI 571
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 565 TPSGGTAQTPEPGTSQP--MPPSMGTSTSHQPATPG--GGTAQTPEAgTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGT 640
Cdd:pfam05109 572 PTLGKTSPTSAVTTPTPnaTSPTVGETSPQANTTNHtlGGTSSTPVV-TSPPKNATSAVTTGQHNITSSSTSSMSLRPSS 650
|
250
....*....|....*...
gi 1695091487 641 -SQPMPLSKSTPSSGGGP 657
Cdd:pfam05109 651 iSETLSPSTSDNSTSHMP 668
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
564-654 |
3.69e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 44.00 E-value: 3.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 564 ATPSGGTAQTPEPGTSQPM---PPSMGTSTSHQP------ATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTAQ 634
Cdd:PRK14971 369 ASGGRGPKQHIKPVFTQPAaapQPSAAAAASPSPsqssaaAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQAVR 448
|
90 100
....*....|....*....|
gi 1695091487 635 TPEPGTSQPMPLSKsTPSSG 654
Cdd:PRK14971 449 PAQFKEEKKIPVSK-VSSLG 467
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
440-658 |
4.44e-04 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 43.80 E-value: 4.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 440 SGTATTVIEIQVSEQ-EPPSTDVPPSPeAGGTTGPWTSTTSEVPRPPEpsqgpsttssgggtgpHPPSGTTLRPPTSSTp 518
Cdd:pfam17823 43 SGDAVPRADNKSSEQ*NFCAATAAPAP-VTLTKGTSAAHLNSTEVTAE----------------HTPHGTDLSEPATRE- 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 519 GGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMP------PGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSH 592
Cdd:pfam17823 105 GAADGAASRALAAAASSSPSSAAQSLPAAIAALPseafsaPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTA 184
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1695091487 593 QPATPGGGTAQTPEAGTS-QPMPPGMGTSTSHQPT-TPGGGTAqTPEPGTSQPMPLSKSTPSSGGGPS 658
Cdd:pfam17823 185 ASSTTAASSAPTTAASSApATLTPARGISTAATATgHPAAGTA-LAAVGNSSPAAGTVTAAVGTVTPA 251
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
507-620 |
4.63e-04 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 43.46 E-value: 4.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 507 GTTLRPPTSSTPGGPPGAENSTShqPATPGGDTAQT-PKPGTSQPMPPG---VGTSTSHQPATPSGGTAQTPEPGTSQPM 582
Cdd:PHA03264 252 GVVPPYFEESKGYEPPPAPSGGS--PAPPGDDRPEAkPEPGPVEDGAPGretGGEGEGPEPAGRDGAAGGEPKPGPPRPA 329
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1695091487 583 PPSMGTS-------TSHQPATPGggtaqTPEAGTSQPMPPGMGTS 620
Cdd:PHA03264 330 PDADRPEgwpsleaITFPPPTPA-----TPAVPRARPVIVGTGIA 369
|
|
| PRK14959 |
PRK14959 |
DNA polymerase III subunits gamma and tau; Provisional |
540-659 |
4.95e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184923 [Multi-domain] Cd Length: 624 Bit Score: 43.52 E-value: 4.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 540 AQTPKPGTSQPMPPGVG----TSTSHQPATPSGGTAQTPEPGTSQPM---PPSMGTSTSHQPATPGGGTAQTPEA--GTS 610
Cdd:PRK14959 360 AMLPRLMPVESLRPSGGgasaPSGSAAEGPASGGAATIPTPGTQGPQgtaPAAGMTPSSAAPATPAPSAAPSPRVpwDDA 439
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1695091487 611 QPMPPGMGTSTSHQPTTPGGgtaqTPEPGTSQPMPLSKSTPSSGGGPSE 659
Cdd:PRK14959 440 PPAPPRSGIPPRPAPRMPEA----SPVPGAPDSVASASDAPPTLGDPSD 484
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
510-660 |
5.14e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.01 E-value: 5.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 510 LRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTP-KPGTSQPMPPGVGTSTSHQPATPSGGTAQtPEPGTSQPMPPSMGT 588
Cdd:PHA03307 774 LLEPAEPQRGAGSSPPVRAEAAFRRPGRLRRSGPaADAASRTASKRKSRSHTPDGGSESSGPAR-PPGAAARPPPARSSE 852
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1695091487 589 STSHQPATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTPSSGGGPSED 660
Cdd:PHA03307 853 SSKSKPAAAGGRARGKNGRRRPRPPEPRARPGAAAPPKAAAAAPPAGAPAPRPRPAPRVKLGPMPPGGPDPR 924
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
533-629 |
5.77e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 43.61 E-value: 5.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 533 ATPGGDTAQTPKPGTSQPM---PPGVGTSTSHQP------ATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTAQ 603
Cdd:PRK14971 369 ASGGRGPKQHIKPVFTQPAaapQPSAAAAASPSPsqssaaAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQAVR 448
|
90 100
....*....|....*....|....*.
gi 1695091487 604 TPEAGTSQPMPPgMGTSTSHQPTTPG 629
Cdd:PRK14971 449 PAQFKEEKKIPV-SKVSSLGPSTLRP 473
|
|
| PRK13700 |
PRK13700 |
conjugal transfer protein TraD; Provisional |
514-589 |
7.35e-04 |
|
conjugal transfer protein TraD; Provisional
Pssm-ID: 184256 [Multi-domain] Cd Length: 732 Bit Score: 43.03 E-value: 7.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 514 TSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVG-TSTSHQPATPSGGT----AQTPEPGTSQPMPPSMGT 588
Cdd:PRK13700 604 EPDVPEVASGEDVTQAEQPQQPQQPQQPQQPQQPQQPVSPVINdKKSDAGVNVPAGGIeqelKMKPEEEMEQQLPPGISE 683
|
.
gi 1695091487 589 S 589
Cdd:PRK13700 684 S 684
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
465-658 |
7.74e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 43.30 E-value: 7.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 465 PEAGGTTGPWTSTTSEVPRP-PEPSQGPSttssgggtgphPPSGTTLRPPTSSTPGGPPGAensTSHQPATPGGDTAQTP 543
Cdd:PRK07003 360 PAVTGGGAPGGGVPARVAGAvPAPGARAA-----------AAVGASAVPAVTAVTGAAGAA---LAPKAAAAAAATRAEA 425
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 544 KPgtSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTAQTPEAGTSQPMPPGMGTSTSH 623
Cdd:PRK07003 426 PP--AAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAAT 503
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1695091487 624 QPTTPGGGT------------AQTPEPGTSQPMPLSKSTPSSGGGPS 658
Cdd:PRK07003 504 PAAVPDARApaaasredapaaAAPPAPEARPPTPAAAAPAARAGGAA 550
|
|
| SPT5 |
COG5164 |
Transcription elongation factor SPT5 [Transcription]; |
440-658 |
9.17e-04 |
|
Transcription elongation factor SPT5 [Transcription];
Pssm-ID: 444063 [Multi-domain] Cd Length: 495 Bit Score: 42.71 E-value: 9.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 440 SGTATTVIEIQVSEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGpsttssgggtgphPPSGTTLRPPTSSTPG 519
Cdd:COG5164 68 NQGATGPAQNQGGTTPAQNQGGTRPAGNTGGTTPAGDGGATGPPDDGGATG-------------PPDDGGSTTPPSGGST 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 520 GPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTShqpATPSGGTAQTPEPGTSQPMPPSMGTSTSHQ--PATP 597
Cdd:COG5164 135 TPPGDGGSTPPGPGSTGPGGSTTPPGDGGSTTPPGPGGSTT---PPDDGGSTTPPNKGETGTDIPTGGTPRQGPdgPVKK 211
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1695091487 598 GGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTPSSGGGPS 658
Cdd:COG5164 212 DDKNGKGNPPDDRGGKTGPKDQRPKTNPIERRGPERPEAAALPAELTALEAENRAANPEPA 272
|
|
| motB |
PRK12799 |
flagellar motor protein MotB; Reviewed |
523-642 |
1.07e-03 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 42.40 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 523 GAENSTSHQPATPGGDTAQTPKPGTSQPMPPG---VGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGG 599
Cdd:PRK12799 294 DTHGTVPVAAVTPSSAVTQSSAITPSSAAIPSpavIPSSVTTQSATTTQASAVALSSAGVLPSDVTLPGTVALPAAEPVN 373
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1695091487 600 GTAQTPEAGTSQPMPPGMGTSTSHQPTT--PGGGTAQTPEPGTSQ 642
Cdd:PRK12799 374 MQPQPMSTTETQQSSTGNITSTANGPTTslPAAPASNIPVSPTSR 418
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
452-658 |
1.57e-03 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 42.35 E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 452 SEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPE--------PSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPggPPG 523
Cdd:PHA03377 668 SRRQPATQSTPPRPSWLPSVFVLPSVDAGRAQPSEeshlssmsPTQPISHEEQPRYEDPDDPLDLSLHPDQAPPP--SHQ 745
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 524 AENSTSHQPATPggdtaQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPE---PGTSQPMPPSMGTSTSHQPATPGGG 600
Cdd:PHA03377 746 APYSGHEEPQAQ-----QAPYPGYWEPRPPQAPYLGYQEPQAQGVQVSSYPGyagPWGLRAQHPRYRHSWAYWSQYPGHG 820
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1695091487 601 TAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPG------TSQPMPLSKSTPSSGGGPS 658
Cdd:PHA03377 821 HPQGPWAPRPPHLPPQWDGSAGHGQDQVSQFPHLQSETGpprlqlSQVPQLPYSQTLVSSSAPS 884
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
415-658 |
1.57e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 41.87 E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 415 VVLTTTTLA---QAGAFYAEVEAHNTVTSGTATTVIEIQVSEQEPPSTDVPPSPEAGGTTgpwTSTTSEVPRPPEPSQGP 491
Cdd:pfam17823 70 VTLTKGTSAahlNSTEVTAEHTPHGTDLSEPATREGAADGAASRALAAAASSSPSSAAQS---LPAAIAALPSEAFSAPR 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 492 STTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSH-QPATPSGGT 570
Cdd:pfam17823 147 AAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAAtATGHPAAGT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 571 A------QTPEPGT-----SQPMPPSMGTSTSH-QPATPGGGTAQT--PEAGTSQPMPPGMGTSTSHQPTTPGGGTAQTP 636
Cdd:pfam17823 227 AlaavgnSSPAAGTvtaavGTVTPAALATLAAAaGTVASAAGTINMgdPHARRLSPAKHMPSDTMARNPAAPMGAQAQGP 306
|
250 260
....*....|....*....|..
gi 1695091487 637 EPGTSQPMPLSKSTPSSGGGPS 658
Cdd:pfam17823 307 IIQVSTDQPVHNTAGEPTPSPS 328
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
438-604 |
1.79e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 41.65 E-value: 1.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 438 VTSGtATTVIEIQVSEQEPPST--DVPPSPEAGG------TTGPWTSTT----SEVPRPPEPSQGPSTTSSGggtgphpp 505
Cdd:PRK13335 16 LTTG-AITVTTQSVKAEKIQSTkvDKVPTLKAERlaminiTAGANSATTqaanTRQERTPKLEKAPNTNEEK-------- 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 506 SGTTLRPPTSStpggPPGAENSTSHQPATPGgdtaqtpkPGTSQPmppgvgtSTSHQPATPSggTAQTPEPGTSQPMPps 585
Cdd:PRK13335 87 TSASKIEKISQ----PKQEEQKSLNISATPA--------PKQEQS-------QTTTESTTPK--TKVTTPPSTNTPQP-- 143
|
170
....*....|....*....
gi 1695091487 586 MGTSTSHQPATPGGGTAQT 604
Cdd:PRK13335 144 MQSTKSDTPQSPTIKQAQT 162
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
456-663 |
1.90e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 42.06 E-value: 1.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 456 PPSTDVPPSPEAGG------TTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPP------SGTTLRPPtsstPGGPPG 523
Cdd:pfam03154 358 PPTTPIPQLPNPQShkhpphLSGPSPFQMNSNLPPPPALKPLSSLSTHHPPSAHPPplqlmpQSQQLPPP----PAQPPV 433
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 524 AENSTSHQPAtpggdTAQTPKPGTSQPMPPgvGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMgtSTSHQPATPGGGTAQ 603
Cdd:pfam03154 434 LTQSQSLPPP-----AASHPPTSGLHQVPS--QSPFPQHPFVPGGPPPITPPSGPPTSTSSAM--PGIQPPSSASVSSSG 504
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1695091487 604 TPEAGTSQPMPP----GMGTSTSHQPTTPgggtaqTPEPGTSQPMPLSKSTPSSGggpSEDKRF 663
Cdd:pfam03154 505 PVPAAVSCPLPPvqikEEALDEAEEPESP------PPPPRSPSPEPTVVNTPSHA---SQSARF 559
|
|
| G_path_suppress |
pfam15991 |
G-protein pathway suppressor; This family of proteins inhibits G-protein- and ... |
504-657 |
1.96e-03 |
|
G-protein pathway suppressor; This family of proteins inhibits G-protein- and mitogen-activated protein kinase-mediated signal transduction.
Pssm-ID: 464961 [Multi-domain] Cd Length: 272 Bit Score: 41.06 E-value: 1.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 504 PPSGTTLRPPTSSTPGGPPGAENSTsHQPATP---------GGDTAQTPKPGTSQPMPPG----VGTSTSHQPATPSGGT 570
Cdd:pfam15991 114 PQLSMQGQPHHQQHPGPQVGVLKRT-RSPSPPvqqqayykqPAFSPGYAEHGQQKHDDGRrgydVARFGSWNKSTAQYPP 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 571 AQTPEPGTSQPMPPSmgtSTSHQPATpgGGTAQTPEAGTSQPMPPGMgtstsHQPTTPGGgtaqTPEPGTSQPMPLSKST 650
Cdd:pfam15991 193 SGQLFYPTHQYLPPP---QTQGQADA--RLQTIYPQPGYALPLQQQY-----EHANQPSP----FVSSSPLKQMQSPKAG 258
|
....*..
gi 1695091487 651 PSSGGGP 657
Cdd:pfam15991 259 PGPQPMQ 265
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
504-629 |
1.98e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 41.62 E-value: 1.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 504 PPSGTTLRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPgTSQPMP 583
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAP-AAAPAA 444
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1695091487 584 PSMGTSTSHQPA----TPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPG 629
Cdd:PRK14951 445 VALAPAPPAQAApetvAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEG 494
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
513-638 |
2.35e-03 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 41.64 E-value: 2.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 513 PTSSTPGGPPGAENSTSHQPATPggDTAQTPKPGTSQPMPPGVgtsTSHQPATpsggtaQTPEPGTSqpmppsmgtSTSH 592
Cdd:PHA03269 46 PHQAASRAPDPAVAPTSAASRKP--DLAQAPTPAASEKFDPAP---APHQAAS------RAPDPAVA---------PQLA 105
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1695091487 593 QPATPGGGTAQTpEAGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEP 638
Cdd:PHA03269 106 AAPKPDAAEAFT-SAAQAHEAPADAGTSAASKKPDPAAHTQHSPPP 150
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
508-616 |
2.50e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 41.33 E-value: 2.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 508 TTLRPPTSSTPGGPpgaeNSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMG 587
Cdd:PRK14950 358 ALLVPVPAPQPAKP----TAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTR 433
|
90 100 110
....*....|....*....|....*....|
gi 1695091487 588 TStshqpatpgggtAQTPEAGTS-QPMPPG 616
Cdd:PRK14950 434 AA------------IPVDEKPKYtPPAPPK 451
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
445-634 |
2.65e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 41.35 E-value: 2.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 445 TVIEIQVSEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPS---QGPSTTSSGGGTGPHPPSGTTLRPPTSSTP--- 518
Cdd:PRK14086 91 SAGEPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPrqdQLPTARPAYPAYQQRPEPGAWPRAADDYGWqqq 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 519 --GGPPGAENSTSHQPATPGGDTAQTP---KPGTSQPMPPGVGTSTSHQPatPSGGTAQTPEPgtsqpmPPSMGTSTSHQ 593
Cdd:PRK14086 171 rlGFPPRAPYASPASYAPEQERDREPYdagRPEYDQRRRDYDHPRPDWDR--PRRDRTDRPEP------PPGAGHVHRGG 242
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1695091487 594 PATPGGGTAQTPEAGTSQPMPPGMGTSTShqpTTPGGGTAQ 634
Cdd:PRK14086 243 PGPPERDDAPVVPIRPSAPGPLAAQPAPA---PGPGEPTAR 280
|
|
| PHA03132 |
PHA03132 |
thymidine kinase; Provisional |
425-652 |
2.82e-03 |
|
thymidine kinase; Provisional
Pssm-ID: 222997 [Multi-domain] Cd Length: 580 Bit Score: 41.29 E-value: 2.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 425 AGAFYAEVEAHNTVTSGTATTVIEiqvsEQEppstDVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHP 504
Cdd:PHA03132 26 DENFDAERDDFLTPLGSTSEATSE----DDD----DLYPPRETGSGGGVATSTIYTVPRPPRGPEQTLDKPDSLPASREL 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 505 PSGTTLRPPTSSTP-GGPPGAENSTSHQPATPGGDTAQtpkPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMP 583
Cdd:PHA03132 98 PPGPTPVPPGGFRGaSSPRLGADSTSPRFLYQVNFPVI---LAPIGESNSSSEELSEEEEHSRPPPSESLKVKNGGKVYP 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 584 PSMGTSTSHQPATPGGGT--AQTPEAGTSQPMPPG-----------MGTSTSHQPTTPgggTAQTPEP-GTSQPMPLSKS 649
Cdd:PHA03132 175 KGFSKHKTHKRSEFSGLTkkAARKRKGSFVFKPSQlkelsgslknlLHLDDSAETDPA---TRQVPVPvHVLYPPLLTEY 251
|
...
gi 1695091487 650 TPS 652
Cdd:PHA03132 252 VPY 254
|
|
| SOBP |
pfam15279 |
Sine oculis-binding protein; SOBP is associated with syndromic and nonsyndromic intellectual ... |
451-645 |
2.89e-03 |
|
Sine oculis-binding protein; SOBP is associated with syndromic and nonsyndromic intellectual disability. It carries a zinc-finger of the zf-C2H2 type at the N-terminus, and a highly characteriztic C-terminal PhPhPhPhPhPh motif. The deduced 873-amino acid protein contains an N-terminal nuclear localization signal (NLS), followed by 2 FCS-type zinc finger motifs, a proline-rich region (PR1), a putative RNA-binding motif region, and a C-terminal NLS embedded in a second proline-rich motif. SOBP is expressed in various human tissues, including developing mouse brain at embryonic day 14. In postnatal and adult mouse brain SOBP is expressed in all neurons, with intense staining in the limbic system. Highest expression is in layer V cortical neurons, hippocampus, pyriform cortex, dorsomedial nucleus of thalamus, amygdala, and hypothalamus. Postnatal expression of SOBP in the limbic system corresponds to a time of active synaptogenesis. the family is also referred to as Jackson circler, JXC1. In seven affected siblings from a consanguineous Israeli Arab family with mental retardation, anterior maxillary protrusion, and strabismus mutations were found in this protein.
Pssm-ID: 464609 [Multi-domain] Cd Length: 325 Bit Score: 40.57 E-value: 2.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 451 VSEQEPPSTDVPP--SPEAGGTTGPWTSTTSE----VPRPPEPSQGPSTTSSGGGTGPHPPsgtTLRPPTSSTPGGPPGA 524
Cdd:pfam15279 91 ESVSPGPSSSASPssSPTSSNSSKPLISVASSskllAPKPHEPPSLPPPPLPPKKGRRHRP---GLHPPLGRPPGSPPMS 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 525 EnsTSHQPATPGGDTAQTPK-----PGTSQPMPPgvgTSTSHQPATPSGGTAQTPEPGT-SQPMPPSMGTSTSHQPATPG 598
Cdd:pfam15279 168 M--TPRGLLGKPQQHPPPSPlpafmEPSSMPPPF---LRPPPSIPQPNSPLSNPMLPGIgPPPKPPRNLGPPSNPMHRPP 242
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1695091487 599 GGTAQTPEAGTSQPMPPGMgtstshQPTTPGGGTAQTPEPGTSQPMP 645
Cdd:pfam15279 243 FSPHHPPPPPTPPGPPPGL------PPPPPRGFTPPFGPPFPPVNMM 283
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
465-637 |
3.55e-03 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 40.80 E-value: 3.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 465 PEAGGTTGPWTSTTSEVPRPPEPSQGPSTTssgggtgpHPPSG--TTLRPPTSSTPGGPPGAENSTSHQPATPggdtAQT 542
Cdd:pfam05539 168 PKTAVTTSKTTSWPTEVSHPTYPSQVTPQS--------QPATQghQTATANQRLSSTEPVGTQGTTTSSNPEP----QTE 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 543 PKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSmGTSTSHQPATPgGGTAQTPEAGTSQPMPPGMGTSTS 622
Cdd:pfam05539 236 PPPSQRGPSGSPQHPPSTTSQDQSTTGDGQEHTQRRKTPPATS-NRRSPHSTATP-PPTTKRQETGRPTPRPTATTQSGS 313
|
170
....*....|....*
gi 1695091487 623 HQPTTPGGGTAQTPE 637
Cdd:pfam05539 314 SPPHSSPPGVQANPT 328
|
|
| PRK12495 |
PRK12495 |
hypothetical protein; Provisional |
513-634 |
3.90e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 183558 [Multi-domain] Cd Length: 226 Bit Score: 39.85 E-value: 3.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 513 PTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPePGTSQPMPPSMGTSTSH 592
Cdd:PRK12495 62 PTCQQPVTEDGAAGDDAGDGAEATAPSDAGSQASPDDDAQPAAEAEAADQSAPPEASSTSAT-DEAATDPPATAAARDGP 140
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1695091487 593 QPATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTAQ 634
Cdd:PRK12495 141 TPDPTAQPATPDERRSPRQRPPVSGEPPTPSTPDAHVAGTLQ 182
|
|
| Med15 |
pfam09606 |
ARC105 or Med15 subunit of Mediator complex non-fungal; The approx. 70 residue Med15 domain of ... |
513-655 |
3.99e-03 |
|
ARC105 or Med15 subunit of Mediator complex non-fungal; The approx. 70 residue Med15 domain of the ARC-Mediator co-activator is a three-helix bundle with marked similarity to the KIX domain. The sterol regulatory element binding protein (SREBP) family of transcription activators use the ARC105 subunit to activate target genes in the regulation of cholesterol and fatty acid homeostasis. In addition, Med15 is a critical transducer of gene activation signals that control early metazoan development.
Pssm-ID: 312941 [Multi-domain] Cd Length: 732 Bit Score: 40.76 E-value: 3.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 513 PTSSTPGGPPGAE--------------NSTSHQPATPGGDTAQT------PKPGTSQPMPPGVGTSTSHQPATPSGGTAQ 572
Cdd:pfam09606 101 PMGPGPGGPMGQQmggpgtasnllaslGRPQMPMGGAGFPSQMSrvgrmqPGGQAGGMMQPSSGQPGSGTPNQMGPNGGP 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 573 ------TPEPGTSQPM----PPSMGTSTSHQPATPGGGTAQtpEAGTSQPMPPG------MGTSTSHQPTTPGGGTAQTp 636
Cdd:pfam09606 181 gqgqagGMNGGQQGPMggqmPPQMGVPGMPGPADAGAQMGQ--QAQANGGMNPQqmggapNQVAMQQQQPQQQGQQSQL- 257
|
170
....*....|....*....
gi 1695091487 637 EPGTSQPMPLSKSTPSSGG 655
Cdd:pfam09606 258 GMGINQMQQMPQGVGGGAG 276
|
|
| PAT1 |
pfam09770 |
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ... |
504-657 |
4.53e-03 |
|
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.
Pssm-ID: 401645 [Multi-domain] Cd Length: 846 Bit Score: 40.79 E-value: 4.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 504 PPSGTTLRPPTSSTPGGPPGAEN-------------STSHQPAT-PGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGG 569
Cdd:pfam09770 169 KAAAPAPAPQPAAQPASLPAPSRkmmsleeveaamrAQAKKPAQqPAPAPAQPPAAPPAQQAQQQQQFPPQIQQQQQPQQ 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 570 TAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTAQTPEAGTSQPMPPGMGTSTS--HQPTTPGGGTAQTPEPGT----SQP 643
Cdd:pfam09770 249 QPQQPQQHPGQGHPVTILQRPQSPQPDPAQPSIQPQAQQFHQQPPPVPVQPTQilQNPNRLSAARVGYPQNPQpgvqPAP 328
|
170
....*....|....
gi 1695091487 644 MPLSKSTPSSGGGP 657
Cdd:pfam09770 329 AHQAHRQQGSFGRQ 342
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
465-602 |
5.49e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 40.35 E-value: 5.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 465 PEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSsgggtgphPPSGTTLRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPK 544
Cdd:PRK07764 386 GVAGGAGAPAAAAPSAAAAAPAAAPAPAAAA--------PAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPP 457
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1695091487 545 PGTSQPMPPG-VGTSTSHQPATPSGGTAQTPEPGTSQPMPPsmgtstshQPATPGGGTA 602
Cdd:PRK07764 458 PAAAPSAQPApAPAAAPEPTAAPAPAPPAAPAPAAAPAAPA--------APAAPAGADD 508
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
504-662 |
6.16e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 40.54 E-value: 6.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 504 PPSGTTLRPPTSSTPGGPPGAENSTSHQPATP---GGDTAQTPKPGTSQPMPPGvgtstSHQPATPSGGTAQTPEPGTSQ 580
Cdd:PHA03307 71 PPPGPGTEAPANESRSTPTWSLSTLAPASPARegsPTPPGPSSPDPPPPTPPPA-----SPPPSPAPDLSEMLRPVGSPG 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 581 PMPPSMGTSTSHQPATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTPSSGGGPSED 660
Cdd:PHA03307 146 PPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPG 225
|
..
gi 1695091487 661 KR 662
Cdd:PHA03307 226 RS 227
|
|
| motB |
PRK12799 |
flagellar motor protein MotB; Reviewed |
523-653 |
6.94e-03 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 39.70 E-value: 6.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 523 GAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTStshQPATpSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTA 602
Cdd:PRK12799 289 GLKQIDTHGTVPVAAVTPSSAVTQSSAITPSSAAIP---SPAV-IPSSVTTQSATTTQASAVALSSAGVLPSDVTLPGTV 364
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1695091487 603 QTPEAGTSQPMPPGMGTSTSHQPTTpGGGTAQTPEPGTSQP-MPLSKSTPSS 653
Cdd:PRK12799 365 ALPAAEPVNMQPQPMSTTETQQSST-GNITSTANGPTTSLPaAPASNIPVSP 415
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
476-612 |
7.19e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 39.90 E-value: 7.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 476 STTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSST-PGGPPGAENSTSHQPATPGGDTAQTPKPGTSqpmppG 554
Cdd:pfam05109 695 STSSPAPRPGTTSQASGPGNSSTSTKPGEVNVTKGTPPKNATsPQAPSGQKTAVPTVTSTGGKANSTTGGKHTT-----G 769
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1695091487 555 VGTSTSHQPATPSGGTAQTPEP--GTSQPMPPSmgTSTSHQP----ATPGGGTAQT--PEAGTSQP 612
Cdd:pfam05109 770 HGARTSTEPTTDYGGDSTTPRTryNATTYLPPS--TSSKLRPrwtfTSPPVTTAQAtvPVPPTSQP 833
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
450-712 |
7.22e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 40.05 E-value: 7.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 450 QVSEQEPPSTDVPPSPEA--GGTTGPWTSTT-----SEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPP 522
Cdd:PHA03378 514 EDMEQRVMATLLPPSPPQprAGRRAPCVYTEdldieSDEPASTEPVHDQLLPAPGLGPLQIQPLTSPTTSQLASSAPSYA 593
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 523 GAENSTSHQPATPGGDTAQTPKPGTSQP----MPPG----------------VGTSTSHQP----ATPSGGTAQTPEPGT 578
Cdd:PHA03378 594 QTPWPVPHPSQTPEPPTTQSHIPETSAPrqwpMPLRpipmrplrmqpitfnvLVFPTPHQPpqveITPYKPTWTQIGHIP 673
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 579 SQPMPPSMGTSTSHQPATpggGTAQTPEAGTSqPMPPGMGTSTSHQPttPGGGTAQTPEP-GTSQPMPLSKSTPSSGGGP 657
Cdd:PHA03378 674 YQPSPTGANTMLPIQWAP---GTMQPPPRAPT-PMRPPAAPPGRAQR--PAAATGRARPPaAAPGRARPPAAAPGRARPP 747
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1695091487 658 SEDKRFSVVDMAALGGVLGALLLLALLGLAVLVHKHYGPRLKCCCGKAPEPQPQG 712
Cdd:PHA03378 748 AAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQA 802
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
512-644 |
7.72e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 40.07 E-value: 7.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 512 PPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTS 591
Cdd:PRK10263 751 PVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQY 830
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1695091487 592 HQPATPgggTAQTPEAGTSQPMPPGMGTSTS-HQPTTP-GGGTAQTPEPGTSQPM 644
Cdd:PRK10263 831 QQPQQP---VAPQPQDTLLHPLLMRNGDSRPlHKPTTPlPSLDLLTPPPSEVEPV 882
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
456-666 |
8.08e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 40.15 E-value: 8.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 456 PPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENSTShQPATP 535
Cdd:PHA03307 194 PPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPT-RIWEA 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 536 GGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEP-----GTSQPMPPSMGTSTSHQPATPGGGTAQTP-EAGT 609
Cdd:PHA03307 273 SGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRassssSSSRESSSSSTSSSSESSRGAAVSPGPSPsRSPS 352
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1695091487 610 SQPMPP---GMGTSTSHQPTTPGGGTAQT---PEPGTSQPMPLSKSTPSSGGGPSEDKRFSVV 666
Cdd:PHA03307 353 PSRPPPpadPSSPRKRPRPSRAPSSPAASagrPTRRRARAAVAGRARRRDATGRFPAGRPRPS 415
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
457-576 |
8.79e-03 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 39.71 E-value: 8.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 457 PSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGpsttssgggtgphPPSGTTLRP-----PTSSTPGGPPGAENSTSHQ 531
Cdd:PHA03269 40 PDPAPAPHQAASRAPDPAVAPTSAASRKPDLAQA-------------PTPAASEKFdpapaPHQAASRAPDPAVAPQLAA 106
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1695091487 532 PATPGGDTAQTPKPgTSQPMPPGVGTSTSHQPATPSGGTAQTPEP 576
Cdd:PHA03269 107 APKPDAAEAFTSAA-QAHEAPADAGTSAASKKPDPAAHTQHSPPP 150
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
511-641 |
9.23e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 39.70 E-value: 9.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 511 RPPTSStpGGPPGAENSTSHQPATPGGDTA---QTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMG 587
Cdd:PRK14951 365 KPAAAA--EAAAPAEKKTPARPEAAAPAAApvaQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAP 442
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1695091487 588 TSTSHQPATPgggtAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTS 641
Cdd:PRK14951 443 AAVALAPAPP----AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
482-643 |
9.92e-03 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 39.37 E-value: 9.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 482 PRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPG-----GPPGAENSTSHQPATPGGDT---AQTPKPGTsQPMPP 553
Cdd:NF033839 292 PSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKpevkpQPEKPKPEVKPQLETPKPEVkpqPEKPKPEV-KPQPE 370
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90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1695091487 554 GVGTSTSHQPATPSGGTAQTPEPGTS--QPMPPSMGTSTSHQPATPGGGTAQTPEAGTSQ--PMPPGMGTSTSHQPTTPg 629
Cdd:NF033839 371 KPKPEVKPQPETPKPEVKPQPEKPKPevKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEvkPQPEKPKPEVKPQPEKP- 449
|
170
....*....|....
gi 1695091487 630 gGTAQTPEPGTSQP 643
Cdd:NF033839 450 -KPEVKPQPETPKP 462
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