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pentatricopeptide repeat-containing protein 2, mitochondrial isoform 1 [Homo sapiens]
List of domain hits
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Name | Accession | Description | Interval | E-value | ||
MRP-S27 super family | cl25450 | Mitochondrial 28S ribosomal protein S27; Members of this family of small ribosomal proteins ... |
136-212 | 3.60e-05 | ||
Mitochondrial 28S ribosomal protein S27; Members of this family of small ribosomal proteins possess one of three conserved blocks of sequence found in proteins that stimulate the dissociation of guanine nucleotides from G-proteins, leaving open the possibility that MRP-S27 might be a functional partner of GTP-binding ribosomal proteins. The actual alignment was detected with superfamily member pfam10037: Pssm-ID: 462947 [Multi-domain] Cd Length: 395 Bit Score: 45.51 E-value: 3.60e-05
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Name | Accession | Description | Interval | E-value | ||
MRP-S27 | pfam10037 | Mitochondrial 28S ribosomal protein S27; Members of this family of small ribosomal proteins ... |
136-212 | 3.60e-05 | ||
Mitochondrial 28S ribosomal protein S27; Members of this family of small ribosomal proteins possess one of three conserved blocks of sequence found in proteins that stimulate the dissociation of guanine nucleotides from G-proteins, leaving open the possibility that MRP-S27 might be a functional partner of GTP-binding ribosomal proteins. Pssm-ID: 462947 [Multi-domain] Cd Length: 395 Bit Score: 45.51 E-value: 3.60e-05
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Name | Accession | Description | Interval | E-value | ||
MRP-S27 | pfam10037 | Mitochondrial 28S ribosomal protein S27; Members of this family of small ribosomal proteins ... |
136-212 | 3.60e-05 | ||
Mitochondrial 28S ribosomal protein S27; Members of this family of small ribosomal proteins possess one of three conserved blocks of sequence found in proteins that stimulate the dissociation of guanine nucleotides from G-proteins, leaving open the possibility that MRP-S27 might be a functional partner of GTP-binding ribosomal proteins. Pssm-ID: 462947 [Multi-domain] Cd Length: 395 Bit Score: 45.51 E-value: 3.60e-05
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PPR_2 | pfam13041 | PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is ... |
164-203 | 3.41e-04 | ||
PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found in up to 18 copies in some proteins. The family appears to be greatly expanded in plants and fungi. The repeat has been called PPR. Pssm-ID: 463778 [Multi-domain] Cd Length: 50 Bit Score: 38.11 E-value: 3.41e-04
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Blast search parameters | ||||
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