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neurexin-1 isoform beta1 [Homo sapiens]
LamG and 4.1m domain-containing protein( domain architecture ID 11129565)
protein containing domains LamG, Syndecan, and 4.1m
List of domain hits
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Name | Accession | Description | Interval | E-value | |||
Laminin_G_2 | pfam02210 | Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G ... |
121-239 | 1.78e-24 | |||
Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G subfamily. : Pssm-ID: 460494 [Multi-domain] Cd Length: 126 Bit Score: 97.88 E-value: 1.78e-24
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4.1m | smart00294 | putative band 4.1 homologues' binding motif; |
387-405 | 1.05e-05 | |||
putative band 4.1 homologues' binding motif; : Pssm-ID: 128590 Cd Length: 19 Bit Score: 41.74 E-value: 1.05e-05
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Syndecan super family | cl20212 | Syndecan domain; Syndecans are transmembrane heparin sulfate proteoglycans which are ... |
367-402 | 5.11e-03 | |||
Syndecan domain; Syndecans are transmembrane heparin sulfate proteoglycans which are implicated in the binding of extracellular matrix components and growth factors. The actual alignment was detected with superfamily member pfam01034: Pssm-ID: 460035 Cd Length: 63 Bit Score: 35.45 E-value: 5.11e-03
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Name | Accession | Description | Interval | E-value | |||
Laminin_G_2 | pfam02210 | Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G ... |
121-239 | 1.78e-24 | |||
Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G subfamily. Pssm-ID: 460494 [Multi-domain] Cd Length: 126 Bit Score: 97.88 E-value: 1.78e-24
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LamG | cd00110 | Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have ... |
90-238 | 2.24e-23 | |||
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules. Pssm-ID: 238058 [Multi-domain] Cd Length: 151 Bit Score: 95.56 E-value: 2.24e-23
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LamG | smart00282 | Laminin G domain; |
116-239 | 5.09e-23 | |||
Laminin G domain; Pssm-ID: 214598 [Multi-domain] Cd Length: 132 Bit Score: 93.94 E-value: 5.09e-23
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4.1m | smart00294 | putative band 4.1 homologues' binding motif; |
387-405 | 1.05e-05 | |||
putative band 4.1 homologues' binding motif; Pssm-ID: 128590 Cd Length: 19 Bit Score: 41.74 E-value: 1.05e-05
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Syndecan | pfam01034 | Syndecan domain; Syndecans are transmembrane heparin sulfate proteoglycans which are ... |
367-402 | 5.11e-03 | |||
Syndecan domain; Syndecans are transmembrane heparin sulfate proteoglycans which are implicated in the binding of extracellular matrix components and growth factors. Pssm-ID: 460035 Cd Length: 63 Bit Score: 35.45 E-value: 5.11e-03
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Name | Accession | Description | Interval | E-value | |||
Laminin_G_2 | pfam02210 | Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G ... |
121-239 | 1.78e-24 | |||
Laminin G domain; This family includes the Thrombospondin N-terminal-like domain, a Laminin G subfamily. Pssm-ID: 460494 [Multi-domain] Cd Length: 126 Bit Score: 97.88 E-value: 1.78e-24
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LamG | cd00110 | Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have ... |
90-238 | 2.24e-23 | |||
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules. Pssm-ID: 238058 [Multi-domain] Cd Length: 151 Bit Score: 95.56 E-value: 2.24e-23
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LamG | smart00282 | Laminin G domain; |
116-239 | 5.09e-23 | |||
Laminin G domain; Pssm-ID: 214598 [Multi-domain] Cd Length: 132 Bit Score: 93.94 E-value: 5.09e-23
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Laminin_G_1 | pfam00054 | Laminin G domain; |
121-194 | 1.36e-06 | |||
Laminin G domain; Pssm-ID: 395008 [Multi-domain] Cd Length: 131 Bit Score: 47.31 E-value: 1.36e-06
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4.1m | smart00294 | putative band 4.1 homologues' binding motif; |
387-405 | 1.05e-05 | |||
putative band 4.1 homologues' binding motif; Pssm-ID: 128590 Cd Length: 19 Bit Score: 41.74 E-value: 1.05e-05
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Syndecan | pfam01034 | Syndecan domain; Syndecans are transmembrane heparin sulfate proteoglycans which are ... |
367-402 | 5.11e-03 | |||
Syndecan domain; Syndecans are transmembrane heparin sulfate proteoglycans which are implicated in the binding of extracellular matrix components and growth factors. Pssm-ID: 460035 Cd Length: 63 Bit Score: 35.45 E-value: 5.11e-03
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Blast search parameters | ||||
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