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Conserved domains on  [gi|21553335|ref|NP_660157|]
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dnaJ homolog subfamily B member 7 [Homo sapiens]

Protein Classification

molecular chaperone DnaJ( domain architecture ID 1000952)

molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  2.10.230.10
Gene Ontology:  GO:0051082|GO:0005524|GO:0009408|GO:0006457
PubMed:  8016869|15063739|29290615
SCOP:  4003813|4002149

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10767 super family cl35946
chaperone protein DnaJ; Provisional
 3-101 3.30e-38

chaperone protein DnaJ; Provisional


The actual alignment was detected with superfamily member PRK10767:

Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 138.74  E-value: 3.30e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKeEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGL--NGGGSHF 80
Cdd:PRK10767   5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFeqGGGGGGF 83

                         90       100
                 ....*....|....*....|.
gi 21553335   81 DDECEYGFTFhkpDDVFKEIF 101
Cdd:PRK10767  84 GGGGGFGDIF---GDIFGDIF 101
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 3-101 3.30e-38

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 138.74  E-value: 3.30e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKeEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGL--NGGGSHF 80
Cdd:PRK10767   5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFeqGGGGGGF 83

                         90       100
                 ....*....|....*....|.
gi 21553335   81 DDECEYGFTFhkpDDVFKEIF 101
Cdd:PRK10767  84 GGGGGFGDIF---GDIFGDIF 101
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-101 4.88e-36

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 132.72  E-value: 4.88e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335     3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPEnkEEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGGGSH--F 80
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGggG 78

                          90       100
                  ....*....|....*....|.
gi 21553335    81 DDECEYGFTFHKPDDVFKEIF 101
Cdd:TIGR02349  79 GFNGFDIGFFGDFGDIFGDFF 99
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-74 8.23e-32

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 115.57  E-value: 8.23e-32
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 21553335   3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKeEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLN 74
Cdd:COG0484   1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAEL 71
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 8.36e-32

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 112.95  E-value: 8.36e-32
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 21553335     3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKeEAERKFKEVAEAYEVLSNDEKRDIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 4.12e-28

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 103.08  E-value: 4.12e-28
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335      2 VDYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKEEAERKFKEVAEAYEVLSNDEK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-161 6.64e-26

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 106.44  E-value: 6.64e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPEnkEEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGggshfdd 82
Cdd:NF037946   6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKA--PDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDG------- 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335   83 ecEYGFTFhKPDDVFKEIFHERDPfSFHFFEDSLedllnrPGSSYGNRNRDAGYFFS-----TASEYPIFEKFSSY---- 153
Cdd:NF037946  77 --EGGFGF-DAFDVFSSFFETINK-SGAFLDDSV------DESVSADDDLDRLFDDSkepsfTSGLDEIVQFWEAFignp 146


                 ....*...
gi 21553335  154 DTGYTSQG 161
Cdd:NF037946 147 DYGYYDEN 154
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 2.39e-24

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 92.99  E-value: 2.39e-24
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 21553335   3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENkEEAERKFKEVAEAYEVLSN 58
Cdd:cd06257   1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 3-101 3.30e-38

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 138.74  E-value: 3.30e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKeEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGL--NGGGSHF 80
Cdd:PRK10767   5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFeqGGGGGGF 83

                         90       100
                 ....*....|....*....|.
gi 21553335   81 DDECEYGFTFhkpDDVFKEIF 101
Cdd:PRK10767  84 GGGGGFGDIF---GDIFGDIF 101
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-101 4.88e-36

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 132.72  E-value: 4.88e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335     3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPEnkEEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGGGSH--F 80
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGggG 78

                          90       100
                  ....*....|....*....|.
gi 21553335    81 DDECEYGFTFHKPDDVFKEIF 101
Cdd:TIGR02349  79 GFNGFDIGFFGDFGDIFGDFF 99
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 3-101 8.84e-35

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 129.50  E-value: 8.84e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKeEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNG----GGS 78
Cdd:PRK14294   5 DYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDK-EAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGtgfsGFS 83

                         90       100
                 ....*....|....*....|...
gi 21553335   79 HFDDeceygfTFHKPDDVFKEIF 101
Cdd:PRK14294  84 GFDD------IFSSFGDIFEDFF 100
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 3-136 5.92e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 121.96  E-value: 5.92e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKEEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGGGSHFDD 82
Cdd:PRK14290   4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFNW 83

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 21553335   83 EceyGFT-FHKPDDVFKEIFHERdpFSFHFFedsledllnrpgSSYGNRNRDAGY 136
Cdd:PRK14290  84 D---NFThFSDINDIFNQIFGGN--FGSDFF------------SGFGNQQSTRNI 121
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-74 8.23e-32

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 115.57  E-value: 8.23e-32
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 21553335   3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKeEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLN 74
Cdd:COG0484   1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAEL 71
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 8.36e-32

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 112.95  E-value: 8.36e-32
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 21553335     3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKeEAERKFKEVAEAYEVLSNDEKRDIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 3-109 8.73e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 121.77  E-value: 8.73e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENkEEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGGGShfdd 82
Cdd:PRK14301   5 DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN-PEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGG---- 79

                         90       100       110
                 ....*....|....*....|....*....|
gi 21553335   83 eceyGFTFHKPDDVFK---EIFHerDPFSF 109
Cdd:PRK14301  80 ----FGGFSSAEDIFShfsDIFG--DLFGF 103
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 3-132 5.09e-31

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 119.87  E-value: 5.09e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPEnkEEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGGGSHFDD 82
Cdd:PRK14291   4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQG 81

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 21553335   83 ECEY-GFTFHKPDDVFKEIFherDPFSFhffedslEDLLNRPGSSYGNRNR 132
Cdd:PRK14291  82 QEGFsDFGGGNIEDILEDVF---DIFGF-------GDIFGRRRATRERRKT 122
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 3-104 1.06e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 118.74  E-value: 1.06e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKEEAERKFKEVAEAYEVLSNDEKRDIYDKYG-------TEGLNG 75
Cdd:PRK14282   5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGyvgeqppYQETES 84

                         90       100       110
                 ....*....|....*....|....*....|
gi 21553335   76 GGSHFDDEC-EYGFTFHkpDDVFKEIFHER 104
Cdd:PRK14282  85 GGGFFEDIFkDFENIFN--RDIFDIFFGER 112
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 3-82 3.20e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 117.99  E-value: 3.20e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKeEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLN-------- 74
Cdd:PRK14281   4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNK-EAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGssaasggg 82

                         90
                 ....*....|..
gi 21553335   75 ----GGGSHFDD 82
Cdd:PRK14281  83 pgygGGGGDFND 94
PRK14280 PRK14280
molecular chaperone DnaJ;
3-106 4.78e-29

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 114.05  E-value: 4.78e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPEnkEEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLN---GGGSH 79
Cdd:PRK14280   5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE--EGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNqgfGGGGF 82

                         90       100       110
                 ....*....|....*....|....*....|.
gi 21553335   80 FDDECEYGFTFhkpDDVFKEIFH----ERDP 106
Cdd:PRK14280  83 GGGDFGGGFGF---EDIFSSFFGgggrRRDP 110
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 3-80 1.99e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 112.63  E-value: 1.99e-28
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKeEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGGGSHF 80
Cdd:PRK14284   2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDA-EAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGF 78
PRK14289 PRK14289
molecular chaperone DnaJ;
3-97 2.72e-28

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 112.23  E-value: 2.72e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKeEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNG--GGSHF 80
Cdd:PRK14289   6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDK-EAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGaaGGGGF 84

                         90
                 ....*....|....*..
gi 21553335   81 DDEceyGFTFhkpDDVF 97
Cdd:PRK14289  85 SGE---GMSM---EDIF 95
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 4.12e-28

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 103.08  E-value: 4.12e-28
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335      2 VDYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKEEAERKFKEVAEAYEVLSNDEK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
PRK14297 PRK14297
molecular chaperone DnaJ;
3-101 4.21e-28

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 111.80  E-value: 4.21e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKeEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGGGShFDD 82
Cdd:PRK14297   5 DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNK-EAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGG-FGS 82

                         90
                 ....*....|....*....
gi 21553335   83 ECEYGFTFHKPDDvFKEIF 101
Cdd:PRK14297  83 GGFGGFDFSDMGG-FGDIF 100
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 3-134 6.12e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 111.43  E-value: 6.12e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKeEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGGGSHFDD 82
Cdd:PRK14277   6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDK-EAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQGG 84

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 21553335   83 ECEYGFTFHKPDdvfkeifherdpFSFHFFEDSLEDLLnrpGSSYGNRNRDA 134
Cdd:PRK14277  85 FGQGGFGGGGFD------------FDFGGFGDIFEDIF---GDFFGTGRRRA 121
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 3-101 6.88e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 108.40  E-value: 6.88e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPEnkEEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGGGShfDD 82
Cdd:PRK14298   6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYS--AE 81

                         90
                 ....*....|....*....
gi 21553335   83 ECEYGFTFHKPDDVFKEIF 101
Cdd:PRK14298  82 DIFRGADFGGFGDIFEMFF 100
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 3-106 1.79e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 107.10  E-value: 1.79e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPEnkEEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGG------ 76
Cdd:PRK14276   5 EYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE--PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGfgggag 82

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 21553335   77 -GSHFDDECEYG-FtfhkpDDVFKEIFH----ERDP 106
Cdd:PRK14276  83 gFGGFDGSGGFGgF-----EDIFSSFFGgggaRRNP 113
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 3-134 5.04e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 106.06  E-value: 5.04e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPEnkEEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGggshFDD 82
Cdd:PRK14283   6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDG----FSQ 79

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 21553335   83 EceygftfhkpdDVFKEIFHErDPFS-FHFFEDSLEDLLNRPGSSYGNRNRDA 134
Cdd:PRK14283  80 E-----------DIFNNINFE-DIFQgFGFGIGNIFDMFGFGGGSRHGPQRGA 120
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-161 6.64e-26

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 106.44  E-value: 6.64e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPEnkEEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGggshfdd 82
Cdd:NF037946   6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKA--PDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDG------- 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335   83 ecEYGFTFhKPDDVFKEIFHERDPfSFHFFEDSLedllnrPGSSYGNRNRDAGYFFS-----TASEYPIFEKFSSY---- 153
Cdd:NF037946  77 --EGGFGF-DAFDVFSSFFETINK-SGAFLDDSV------DESVSADDDLDRLFDDSkepsfTSGLDEIVQFWEAFignp 146


                 ....*...
gi 21553335  154 DTGYTSQG 161
Cdd:NF037946 147 DYGYYDEN 154
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 4-101 4.03e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 103.53  E-value: 4.03e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    4 YYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKeEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGGGSHFDDE 83
Cdd:PRK14286   6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNK-ESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFGQG 84

                         90       100
                 ....*....|....*....|
gi 21553335   84 CEYGFT--FHKPDDVFKEIF 101
Cdd:PRK14286  85 AYTDFSdiFGDFGDIFGDFF 104
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-66 4.25e-25

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 96.33  E-value: 4.25e-25
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 21553335   1 MVDYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKEEAERKFKEVAEAYEVLSNDEKRDIYD 66
Cdd:COG2214   4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEELFQRLNEAYEVLSDPERRAEYD 69
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 1-101 1.02e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 102.27  E-value: 1.02e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    1 MVDYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPEnkEEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNG--GGS 78
Cdd:PRK14292   1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGmpGGD 78

                         90       100
                 ....*....|....*....|...
gi 21553335   79 HFddeceyGFTFHKPDDVFKEIF 101
Cdd:PRK14292  79 PF------GGMGFDPMDIFEQLF 95
PRK14293 PRK14293
molecular chaperone DnaJ;
1-101 1.20e-24

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 101.99  E-value: 1.20e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    1 MVDYYEVLGLQRYASPEDIKKAYHKVALKWHPDKnpeNKEE-AERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGGGSh 79
Cdd:PRK14293   2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDV---NKEPgAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAG- 77

                         90       100
                 ....*....|....*....|...
gi 21553335   80 FDDECEY-GFTfhkpdDVFKEIF 101
Cdd:PRK14293  78 FPDMGDMgGFA-----DIFETFF 95
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 2.39e-24

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 92.99  E-value: 2.39e-24
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 21553335   3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENkEEAERKFKEVAEAYEVLSN 58
Cdd:cd06257   1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 3-124 5.66e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 98.86  E-value: 5.66e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPEnkEEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGGGSHFDD 82
Cdd:PRK14299   5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP 82

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 21553335   83 ECEYGFTFHKPD-----DVFKEIFHERDPFSfhffedSLEDLLNRPG 124
Cdd:PRK14299  83 GPPGGGDFSGFNvgdfsDFFQQLFGGRGGFG------GFGDLFGSVG 123
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 3-62 1.46e-23

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 91.21  E-value: 1.46e-23
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335   3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKeEAERKFKEVAEAYEVLSNDEKR 62
Cdd:COG5407   1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDP-KAEERFKEINEAYELLSDAEKR 59
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 3-77 6.68e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 96.98  E-value: 6.68e-23
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKeEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGGG 77
Cdd:PRK14285   4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNK-EAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGG 77
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 4-101 9.88e-23

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 97.20  E-value: 9.88e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    4 YYEVLGLQRYASPEDIKKAYHKVALKWHPDK--NPEnkeeaerKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGGGSHFD 81
Cdd:PTZ00037  30 LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKggDPE-------KFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQPAD 102

                         90       100
                 ....*....|....*....|
gi 21553335   82 deceygftfhkPDDVFKEIF 101
Cdd:PTZ00037 103 -----------ASDLFDLIF 111
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 3-101 1.19e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 96.66  E-value: 1.19e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPEnkEEAERKFKEVAEAYEVLSNDEKRDIYDKYG--TEGLNGGGSHF 80
Cdd:PRK14278   4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVDLGGdpLESAGGGGGGF 81

                         90       100
                 ....*....|....*....|.
gi 21553335   81 ddeceyGFTFHKPDDVFKEIF 101
Cdd:PRK14278  82 ------GGGFGGLGDVFEAFF 96
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 3-103 4.94e-21

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 93.34  E-value: 4.94e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335     3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNpeNKEEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGggshfdd 82
Cdd:TIGR03835   3 DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRN--KAPDAASIFAEINEANDVLSNPKKRANYDKYGHDGVDR------- 73

                          90       100
                  ....*....|....*....|.
gi 21553335    83 ecEYGFTFHKpdDVFKEIFHE 103
Cdd:TIGR03835  74 --EDDFDFQA--DVFNSFFEE 90
PRK14279 PRK14279
molecular chaperone DnaJ;
3-78 4.17e-20

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 89.41  E-value: 4.17e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKEEAERkFKEVAEAYEVLSNDEKRDIYDK---------YGTEGL 73
Cdd:PRK14279  10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEER-FKAVSEAHDVLSDPAKRKEYDEtrrlfagggFGGRRF 88


                 ....*
gi 21553335   74 NGGGS 78
Cdd:PRK14279  89 DGGGG 93
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 3-78 5.33e-19

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 86.22  E-value: 5.33e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPEnkEEAERKFKEVAEAYEVLSNDEKRDIYDKYG----TEGLNGGGS 78
Cdd:PRK14287   5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA--PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGhtdpNQGFGGGGA 82
PRK14295 PRK14295
molecular chaperone DnaJ;
3-81 7.38e-19

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 86.06  E-value: 7.38e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKeEAERKFKEVAEAYEVLSNDEKRDIYD-----------KYGTE 71
Cdd:PRK14295  10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDA-KAEERFKEISEAYDVLSDEKKRKEYDearslfgnggfRPGPG 88

                         90
                 ....*....|
gi 21553335   72 GLNGGGSHFD 81
Cdd:PRK14295  89 GGGGGGFNFD 98
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 3-103 4.36e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 83.53  E-value: 4.36e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNpeNKEEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLN------GG 76
Cdd:PRK14300   4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTT--DAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQnqqsrgGG 81

                         90       100
                 ....*....|....*....|....*..
gi 21553335   77 GSHfddeceyGFTFHKPDDVFKEIFHE 103
Cdd:PRK14300  82 GNH-------GGFHPDINDIFGDFFSD 101
PRK14288 PRK14288
molecular chaperone DnaJ;
2-86 5.45e-18

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 83.20  E-value: 5.45e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    2 VDYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKeEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGGGSHFD 81
Cdd:PRK14288   3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDK-EAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQS 81


                 ....*
gi 21553335   82 DECEY 86
Cdd:PRK14288  82 DFSDF 86
PRK10266 PRK10266
curved DNA-binding protein;
3-104 3.92e-17

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 80.25  E-value: 3.92e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENkeEAERKFKEVAEAYEVLSNDEKRDIYD---------KYGTEGL 73
Cdd:PRK10266   5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEP--DAEARFKEVAEAWEVLSDEQRRAEYDqlwqhrndpQFNRQFQ 82

                         90       100       110
                 ....*....|....*....|....*....|.
gi 21553335   74 NGGGSHFDDEceygfTFhkpDDVFKEIFHER 104
Cdd:PRK10266  83 HGDGQSFNAE-----DF---DDIFSSIFGQH 105
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 3-127 1.43e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 76.14  E-value: 1.43e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENkeEAERKFKEVAEAYEVLSNDEKRDIYDKYGT---EGLNGGGSH 79
Cdd:PRK14296   5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSP--DAHDKMVEINEAADVLLDKDKRKQYDQFGHaafDGSSGFSSN 82

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 21553335   80 FDDeceygftfhkpddvFKEIFHERDPFSFHFFEDSLEDLLNRPGSSY 127
Cdd:PRK14296  83 FGD--------------FEDLFSNMGSSGFSSFTNIFSDFFGSNKSDY 116
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
1-64 1.07e-12

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 62.51  E-value: 1.07e-12
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 21553335   1 MVDYYEVLGLQRYASPEDIKKAYHKVALKWHPDK-----NPENKEEAERKFKEVAEAYEVLSNDEKRDI 64
Cdd:COG1076   3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaaglPEEEQRLALQKAAAINEAYETLKDPRGIDL 71
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 4-75 7.78e-09

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 56.72  E-value: 7.78e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 21553335     4 YYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENkeEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNG 75
Cdd:PTZ00341  575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKG 644
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 2-66 6.52e-07

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 50.42  E-value: 6.52e-07
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 21553335   2 VDYYEVLGLQRY---ASPEDIKKAYHKVALKWHPDKNPENKEEAERK-FKEVAEAYEVLSNDEKRDIYD 66
Cdd:COG5269  43 VDLYALLGLSKYrtkAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEfFKLIQKAREVLGDRKLRLQYD 111
djlA PRK09430
co-chaperone DjlA;
3-56 4.59e-04

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 40.95  E-value: 4.59e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 21553335    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDK------NPENKEEAERKFKEVAEAYEVL 56
Cdd:PRK09430 201 DAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvakglPPEMMEMAKEKAQEIQAAYELI 260
hscB PRK01356
co-chaperone HscB; Provisional
 1-65 1.16e-03

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 39.09  E-value: 1.16e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 21553335    1 MVDYYEVLGLQRYASP--EDIKKAYHKVALKWHPD--KNPENKEEAERKFKEVAEAYEVLSNDEKRDIY 65
Cdd:PRK01356   1 MQNYFQLLGLPQEYNIdlKILEKQYFAMQVKYHPDkaKTLQEKEQNLIIASELNNAYSTLKDALKRAEY 69
PHA03102 PHA03102
Small T antigen; Reviewed
 6-62 4.48e-03

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 36.96  E-value: 4.48e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 21553335    6 EVLGLQR--YASPEDIKKAYHKVALKWHPDK--NPEnkeeaerKFKEVAEAYEVLSNDEKR 62
Cdd:PHA03102   9 DLLGLPRsaWGNLPLMRKAYLRKCLEFHPDKggDEE-------KMKELNTLYKKFRESVKS 62
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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