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Conserved domains on  [gi|255003686|ref|NP_766410|]
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GPI mannosyltransferase 4 [Mus musculus]

Protein Classification

glycosyltransferase family protein( domain architecture ID 229536)

glycosyltransferase family protein may synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PMT_2 super family cl21590
Dolichyl-phosphate-mannose-protein mannosyltransferase; This family contains members that are ...
 15-406 2.24e-24

Dolichyl-phosphate-mannose-protein mannosyltransferase; This family contains members that are not captured by pfam02366.


The actual alignment was detected with superfamily member pfam03901:

Pssm-ID: 473917  Cd Length: 414  Bit Score: 105.52  E-value: 2.24e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255003686   15 LRVLWCLLPQTgyIHPDEFFQSPEVmAEDILGVQATRPWEFYPSSSCRTVVFPLLTSGSTFWLLRLWEELGLWPglvsgy 94
Cdd:pfam03901   9 LRLLLALLVQT--SDPDEHFQSWEP-LHYLIFGYGFLTWEWSPKYGIRSYLYPLLFALPYYLLARLFGDSKYLV------ 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255003686   95 mlLVGPRFLLTALSFALDWAVYDLAP--LWGADRWNALCLLSGSYVTLVFYTRTFSNTIEGLLFTWLLVLVSPGVVRSPT 172
Cdd:pfam03901  80 --FYAPRLLLGLFSALCDYYLYRAVCrkYGLEIARWALLLSLTSWGMFFASTRTLPNSFEMILTSIALYYLLEYGNTSVS 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255003686  173 SKKptpgprwHRYLLGVILAAGFFNRPTFLAFALAPLSLW-----GIHRASELGGIRALIQEALVLLPGAALAavlcvaT 247
Cdd:pfam03901 158 NYK-------YLKAVLLIAALAILGRPTSALLWLPLVLYLllrlrGKRLKLFLFLAISLGLLVALLVLGAVIL------I 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255003686  248 DSWYFSSLSrstgvfLTPANFLYYNLDPQNLARHGTHARLTHLAVNGFLLFGVLhaqalqaawqqlhacLRASPQTGLSR 327
Cdd:pfam03901 225 DSYFYGRFV------FTPLNFLKYNVLSNGSSFYGTHPWYFYFSNGLPNILGPF---------------LLAFILGPLVL 283

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255003686  328 VRGARGLLSSSKSYLllfyFTPLLLLSAFSHQEARFLIPLLVPLVLLCS---PQTQPIPWK--------GTLVLFNILGA 396
Cdd:pfam03901 284 LLRKVSRLSQLLAPI----LIWLFIYSLQPHKEERFLYPVYPLILLSAAialTRLSRRSWKvrkklsllFLLLFFNVSLA 359

                         410
                  ....*....|
gi 255003686  397 LIFGCLHQGG 406
Cdd:pfam03901 360 RLFGLVHQYG 369
 
Name Accession Description Interval E-value
Glyco_transf_22 pfam03901
Alg9-like mannosyltransferase family; Members of this family are mannosyltransferase enzymes. ...
 15-406 2.24e-24

Alg9-like mannosyltransferase family; Members of this family are mannosyltransferase enzymes. At least some members are localized in endoplasmic reticulum and involved in GPI anchor biosynthesis.


Pssm-ID: 281842  Cd Length: 414  Bit Score: 105.52  E-value: 2.24e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255003686   15 LRVLWCLLPQTgyIHPDEFFQSPEVmAEDILGVQATRPWEFYPSSSCRTVVFPLLTSGSTFWLLRLWEELGLWPglvsgy 94
Cdd:pfam03901   9 LRLLLALLVQT--SDPDEHFQSWEP-LHYLIFGYGFLTWEWSPKYGIRSYLYPLLFALPYYLLARLFGDSKYLV------ 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255003686   95 mlLVGPRFLLTALSFALDWAVYDLAP--LWGADRWNALCLLSGSYVTLVFYTRTFSNTIEGLLFTWLLVLVSPGVVRSPT 172
Cdd:pfam03901  80 --FYAPRLLLGLFSALCDYYLYRAVCrkYGLEIARWALLLSLTSWGMFFASTRTLPNSFEMILTSIALYYLLEYGNTSVS 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255003686  173 SKKptpgprwHRYLLGVILAAGFFNRPTFLAFALAPLSLW-----GIHRASELGGIRALIQEALVLLPGAALAavlcvaT 247
Cdd:pfam03901 158 NYK-------YLKAVLLIAALAILGRPTSALLWLPLVLYLllrlrGKRLKLFLFLAISLGLLVALLVLGAVIL------I 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255003686  248 DSWYFSSLSrstgvfLTPANFLYYNLDPQNLARHGTHARLTHLAVNGFLLFGVLhaqalqaawqqlhacLRASPQTGLSR 327
Cdd:pfam03901 225 DSYFYGRFV------FTPLNFLKYNVLSNGSSFYGTHPWYFYFSNGLPNILGPF---------------LLAFILGPLVL 283

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255003686  328 VRGARGLLSSSKSYLllfyFTPLLLLSAFSHQEARFLIPLLVPLVLLCS---PQTQPIPWK--------GTLVLFNILGA 396
Cdd:pfam03901 284 LLRKVSRLSQLLAPI----LIWLFIYSLQPHKEERFLYPVYPLILLSAAialTRLSRRSWKvrkklsllFLLLFFNVSLA 359

                         410
                  ....*....|
gi 255003686  397 LIFGCLHQGG 406
Cdd:pfam03901 360 RLFGLVHQYG 369
 
Name Accession Description Interval E-value
Glyco_transf_22 pfam03901
Alg9-like mannosyltransferase family; Members of this family are mannosyltransferase enzymes. ...
 15-406 2.24e-24

Alg9-like mannosyltransferase family; Members of this family are mannosyltransferase enzymes. At least some members are localized in endoplasmic reticulum and involved in GPI anchor biosynthesis.


Pssm-ID: 281842  Cd Length: 414  Bit Score: 105.52  E-value: 2.24e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255003686   15 LRVLWCLLPQTgyIHPDEFFQSPEVmAEDILGVQATRPWEFYPSSSCRTVVFPLLTSGSTFWLLRLWEELGLWPglvsgy 94
Cdd:pfam03901   9 LRLLLALLVQT--SDPDEHFQSWEP-LHYLIFGYGFLTWEWSPKYGIRSYLYPLLFALPYYLLARLFGDSKYLV------ 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255003686   95 mlLVGPRFLLTALSFALDWAVYDLAP--LWGADRWNALCLLSGSYVTLVFYTRTFSNTIEGLLFTWLLVLVSPGVVRSPT 172
Cdd:pfam03901  80 --FYAPRLLLGLFSALCDYYLYRAVCrkYGLEIARWALLLSLTSWGMFFASTRTLPNSFEMILTSIALYYLLEYGNTSVS 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255003686  173 SKKptpgprwHRYLLGVILAAGFFNRPTFLAFALAPLSLW-----GIHRASELGGIRALIQEALVLLPGAALAavlcvaT 247
Cdd:pfam03901 158 NYK-------YLKAVLLIAALAILGRPTSALLWLPLVLYLllrlrGKRLKLFLFLAISLGLLVALLVLGAVIL------I 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255003686  248 DSWYFSSLSrstgvfLTPANFLYYNLDPQNLARHGTHARLTHLAVNGFLLFGVLhaqalqaawqqlhacLRASPQTGLSR 327
Cdd:pfam03901 225 DSYFYGRFV------FTPLNFLKYNVLSNGSSFYGTHPWYFYFSNGLPNILGPF---------------LLAFILGPLVL 283

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255003686  328 VRGARGLLSSSKSYLllfyFTPLLLLSAFSHQEARFLIPLLVPLVLLCS---PQTQPIPWK--------GTLVLFNILGA 396
Cdd:pfam03901 284 LLRKVSRLSQLLAPI----LIWLFIYSLQPHKEERFLYPVYPLILLSAAialTRLSRRSWKvrkklsllFLLLFFNVSLA 359

                         410
                  ....*....|
gi 255003686  397 LIFGCLHQGG 406
Cdd:pfam03901 360 RLFGLVHQYG 369
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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