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Conserved domains on  [gi|28269687|ref|NP_783318|]
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zygote arrest protein 1 [Homo sapiens]

Protein Classification

3CxxC-type zinc finger protein( domain architecture ID 13454522)

3CxxC-type zinc finger protein similar to Homo sapiens receptor-transporting protein 1 (RTP1) that specifically promotes functional cell surface expression of olfactory receptors, but not of other GPCRs

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
zf-3CxxC pfam13695
Zinc-binding domain; This is a family with several pairs of CxxC motifs possibly representing ...
 327-408 5.78e-12

Zinc-binding domain; This is a family with several pairs of CxxC motifs possibly representing a multiple zinc-binding region. Only one pair of cysteines is associated with a highly conserved histidine residue.


:

Pssm-ID: 463958  Cd Length: 96  Bit Score: 61.67  E-value: 5.78e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687   327 YGYYHCKDCNIRWESAYVWCV----------QGTNKVYFKQFCRTCQKSYNP----YRVEDITCQSCKQTRCSCPVKLRh 392
Cdd:pfam13695   3 YGRFRCSSCSRKWTSAKVWITirmyldppgnGTYNARVYGQRCKKCKRLERPeldeEEVERVLYRLKKKIEKPCYGEKT- 81

                          90
                  ....*....|....*.
gi 28269687   393 vdpKRPHRQDLCGRCK 408
Cdd:pfam13695  82 ---TGPHERDLCEGCK 94
PRK07764 super family cl35613
DNA polymerase III subunits gamma and tau; Validated
 129-306 1.96e-06

DNA polymerase III subunits gamma and tau; Validated


The actual alignment was detected with superfamily member PRK07764:

Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 49.98  E-value: 1.96e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687  129 RRARDPESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEGPGPAAGEQRSGA 208
Cdd:PRK07764 607 GPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPA 686

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687  209 SDGERGPPPARlQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAG 288
Cdd:PRK07764 687 PAAPAAPAGAA-PAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPA 765

                        170
                 ....*....|....*...
gi 28269687  289 RARDGGDGREAAVAGEGP 306
Cdd:PRK07764 766 PAAAPAAAPPPSPPSEEE 783
 
Name Accession Description Interval E-value
zf-3CxxC pfam13695
Zinc-binding domain; This is a family with several pairs of CxxC motifs possibly representing ...
 327-408 5.78e-12

Zinc-binding domain; This is a family with several pairs of CxxC motifs possibly representing a multiple zinc-binding region. Only one pair of cysteines is associated with a highly conserved histidine residue.


Pssm-ID: 463958  Cd Length: 96  Bit Score: 61.67  E-value: 5.78e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687   327 YGYYHCKDCNIRWESAYVWCV----------QGTNKVYFKQFCRTCQKSYNP----YRVEDITCQSCKQTRCSCPVKLRh 392
Cdd:pfam13695   3 YGRFRCSSCSRKWTSAKVWITirmyldppgnGTYNARVYGQRCKKCKRLERPeldeEEVERVLYRLKKKIEKPCYGEKT- 81

                          90
                  ....*....|....*.
gi 28269687   393 vdpKRPHRQDLCGRCK 408
Cdd:pfam13695  82 ---TGPHERDLCEGCK 94
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 129-306 1.96e-06

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 49.98  E-value: 1.96e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687  129 RRARDPESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEGPGPAAGEQRSGA 208
Cdd:PRK07764 607 GPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPA 686

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687  209 SDGERGPPPARlQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAG 288
Cdd:PRK07764 687 PAAPAAPAGAA-PAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPA 765

                        170
                 ....*....|....*...
gi 28269687  289 RARDGGDGREAAVAGEGP 306
Cdd:PRK07764 766 PAAAPAAAPPPSPPSEEE 783
 
Name Accession Description Interval E-value
zf-3CxxC pfam13695
Zinc-binding domain; This is a family with several pairs of CxxC motifs possibly representing ...
 327-408 5.78e-12

Zinc-binding domain; This is a family with several pairs of CxxC motifs possibly representing a multiple zinc-binding region. Only one pair of cysteines is associated with a highly conserved histidine residue.


Pssm-ID: 463958  Cd Length: 96  Bit Score: 61.67  E-value: 5.78e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687   327 YGYYHCKDCNIRWESAYVWCV----------QGTNKVYFKQFCRTCQKSYNP----YRVEDITCQSCKQTRCSCPVKLRh 392
Cdd:pfam13695   3 YGRFRCSSCSRKWTSAKVWITirmyldppgnGTYNARVYGQRCKKCKRLERPeldeEEVERVLYRLKKKIEKPCYGEKT- 81

                          90
                  ....*....|....*.
gi 28269687   393 vdpKRPHRQDLCGRCK 408
Cdd:pfam13695  82 ---TGPHERDLCEGCK 94
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 129-306 1.96e-06

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 49.98  E-value: 1.96e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687  129 RRARDPESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEGPGPAAGEQRSGA 208
Cdd:PRK07764 607 GPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPA 686

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687  209 SDGERGPPPARlQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAG 288
Cdd:PRK07764 687 PAAPAAPAGAA-PAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPA 765

                        170
                 ....*....|....*...
gi 28269687  289 RARDGGDGREAAVAGEGP 306
Cdd:PRK07764 766 PAAAPAAAPPPSPPSEEE 783
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
27-299 1.66e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 47.15  E-value: 1.66e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687   27 PAATKGkGAAGGSWQQRGRGCLPASSPCSAGAASLSFPGCGRLTAAEYFDSYQRERLMALLAQVGPGLGPRARRAGSCDV 106
Cdd:PRK07003 360 PAVTGG-GAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687  107 AVqvSPRIDAAVQCSLGRRTLQRRARDPESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPrtVAVYSPLA 186
Cdd:PRK07003 439 GD--DAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAA--VPDARAPA 514

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687  187 LRRLTAFLEGPGPAAGEQRSGASDGERgpPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPPRE 266
Cdd:PRK07003 515 AASREDAPAAAAPPAPEARPPTPAAAA--PAARAGGAAAALDVLRNAGMRVSSDRGARAAAAAKPAAAPAAAPKPAAPRV 592

                        250       260       270
                 ....*....|....*....|....*....|....
gi 28269687  267 AQEgEAAPRSALRSPGQPPS-AGRARDGGDGREA 299
Cdd:PRK07003 593 AVQ-VPTPRARAATGDAPPNgAARAEQAAESRGA 625
PRK12678 PRK12678
transcription termination factor Rho; Provisional
 97-298 4.89e-05

transcription termination factor Rho; Provisional


Pssm-ID: 237171 [Multi-domain]  Cd Length: 672  Bit Score: 45.67  E-value: 4.89e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687   97 RARRAGSCDVAVQVSPRIDAAVQCSLGRRTLQRRARDPESPAGPGAEGTTGGGSFSQQPSRrglEQGSPQNGAPRPMRFP 176
Cdd:PRK12678  56 KEARGGGAAAAAATPAAPAAAARRAARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAAA---EAASAPEAAQARERRE 132

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687  177 RTVAVYSPLAlrrltafleGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVwtkkaPRRPQSDDDGEAQAAVRASWEQP 256
Cdd:PRK12678 133 RGEAARRGAA---------RKAGEGGEQPATEARADAAERTEEEERDERRRR-----GDREDRQAEAERGERGRREERGR 198

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 28269687  257 ADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGRE 298
Cdd:PRK12678 199 DGDDRDRRDRREQGDRREERGRRDGGDRRGRRRRRDRRDARG 240
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 196-313 1.84e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 43.82  E-value: 1.84e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687  196 GPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPR 275
Cdd:PRK07764 630 AGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATP 709

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 28269687  276 SALRSPGQPPSAGRARDGGDGREAAVAGEGPSPRSPEL 313
Cdd:PRK07764 710 PAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDD 747
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
137-312 9.07e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 41.76  E-value: 9.07e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687  137 PAgPGAEGTTGGGSFSQQPSRRGleqgspqngAPRPMRFPRTVAVYSPLALRRLTAFLEGPGPAAGEQRSGAsdgERGPP 216
Cdd:PRK07003 360 PA-VTGGGAPGGGVPARVAGAVP---------APGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAAT---RAEAP 426

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687  217 PARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPPRE----AQEGEAAPRSALRSPGQPPSAGRARD 292
Cdd:PRK07003 427 PAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSasapASDAPPDAAFEPAPRAAAPSAATPAA 506

                        170       180       190
                 ....*....|....*....|....*....|
gi 28269687  293 GGDGREAAVAGEG----------PSPRSPE 312
Cdd:PRK07003 507 VPDARAPAAASREdapaaaappaPEARPPT 536
PHA03169 PHA03169
hypothetical protein; Provisional
 195-305 1.32e-03

hypothetical protein; Provisional


Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 40.72  E-value: 1.32e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687  195 EGPGPAAGEQRSGASDGERGPPPARLQGPEEGE-VWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAA 273
Cdd:PHA03169 116 SGLSPENTSGSSPESPASHSPPPSPPSHPGPHEpAPPESHNPSPNQQPSSFLQPSHEDSPEEPEPPTSEPEPDSPGPPQS 195

                         90       100       110
                 ....*....|....*....|....*....|..
gi 28269687  274 PRSALRSPGQPPSAGRARDGGDGREAAVAGEG 305
Cdd:PHA03169 196 ETPTSSPPPQSPPDEPGEPQSPTPQQAPSPNT 227
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
84-306 1.85e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 40.63  E-value: 1.85e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687   84 MALLAQVGpgLGPRARRAGSCDVAVQVSPRIDAAVQCSLGRRTLQRRARDPESPAGPGAEGTT----GGGSFSQQPSRRG 159
Cdd:PRK12323 355 MTLLRMLA--FRPGQSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAaravAAAPARRSPAPEA 432

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687  160 L---EQGSPQNGAPRPMRFPRTVAVYSPlALRRLTAFLEGPGPAAGeqrsgASDGERGPPPARLQGPEEGEVWTKKAPRR 236
Cdd:PRK12323 433 LaaaRQASARGPGGAPAPAPAPAAAPAA-AARPAAAGPRPVAAAAA-----AAPARAAPAAAPAPADDDPPPWEELPPEF 506

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 28269687  237 PQ---SDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPP---SAGRARDGGDGREAAVAGEGP 306
Cdd:PRK12323 507 ASpapAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEpvvAPRPPRASASGLPDMFDGDWP 582
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 188-314 2.38e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 40.35  E-value: 2.38e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687  188 RRLTafLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVwTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPPREA 267
Cdd:PRK07764 383 RRLG--VAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAA-APAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPA 459

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 28269687  268 QEGEAAPRSAlRSPGQPPSAGRARDGGDGREAAVAGEGPSPRSPELG 314
Cdd:PRK07764 460 AAPSAQPAPA-PAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAG 505
dnaA PRK14086
chromosomal replication initiator protein DnaA;
106-311 2.71e-03

chromosomal replication initiator protein DnaA;


Pssm-ID: 237605 [Multi-domain]  Cd Length: 617  Bit Score: 40.19  E-value: 2.71e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687  106 VAVQVSPridAAVQCSLGRRTlQRRARDPESPAgPGAEGTTGGGSFSQQPSRRGLEQGsPQNGAPRPmrfprtvaVYSPL 185
Cdd:PRK14086  84 IAITVDP---SAGEPAPPPPH-ARRTSEPELPR-PGRRPYEGYGGPRADDRPPGLPRQ-DQLPTARP--------AYPAY 149

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687  186 ALRRLTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWtkkaprRPQSDDDGEAQAAVRASWEQPADGPELPPR 265
Cdd:PRK14086 150 QQRPEPGAWPRAADDYGWQQQRLGFPPRAPYASPASYAPEQERD------REPYDAGRPEYDQRRRDYDHPRPDWDRPRR 223

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 28269687  266 EAQEgeaaprsalrSPGQPPSAGRARDGGDGREAAVAGEGPSPRSP 311
Cdd:PRK14086 224 DRTD----------RPEPPPGAGHVHRGGPGPPERDDAPVVPIRPS 259
PHA03378 PHA03378
EBNA-3B; Provisional
 94-290 3.07e-03

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 40.05  E-value: 3.07e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687   94 LGPRARRAGSCDVAVQVSPRIDAAVQCSLGRRTLqrrARDPESPAGPGAEGTTGGGSFSQQPSRrgleqGSPQNGAPRPM 173
Cdd:PHA03378 633 MRPLRMQPITFNVLVFPTPHQPPQVEITPYKPTW---TQIGHIPYQPSPTGANTMLPIQWAPGT-----MQPPPRAPTPM 704

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687  174 RFPRTvavySPLALRRltaflegPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASW 253
Cdd:PHA03378 705 RPPAA----PPGRAQR-------PAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGA 773

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 28269687  254 EQPADGPELPPREAQEGEAAPrsalrSPGQPPSAGRA 290
Cdd:PHA03378 774 PTPQPPPQAPPAPQQRPRGAP-----TPQPPPQAGPT 805
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 196-327 5.06e-03

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 39.19  E-value: 5.06e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687  196 GPGPAAGEQR-SGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAP 274
Cdd:PRK13108 319 GPGEPNQPDDvAEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEADIEREQPGDLAGQAPAAHQVDAEAASAAP 398

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 28269687  275 RSALRSPGQPPSAGRAR---------DGGDGREAAVAGEGPSPRSPELGKERLRFQFLEQKY 327
Cdd:PRK13108 399 EEPAALASEAHDETEPEvpekaapipDPAKPDELAVAGPGDDPAEPDGIRRQDDFSSRRRRW 460
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 131-308 9.61e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 38.61  E-value: 9.61e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687   131 ARDPESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPR--TVAVYSPLALRRLTAFLEGPGP-----AAGE 203
Cdd:PHA03307   58 GAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGspTPPGPSSPDPPPPTPPPASPPPspapdLSEM 137

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28269687   204 QRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQ 283
Cdd:PHA03307  138 LRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASA 217

                         170       180
                  ....*....|....*....|....*.
gi 28269687   284 P-PSAGRARDGGDGREAAVAGEGPSP 308
Cdd:PHA03307  218 SsPAPAPGRSAADDAGASSSDSSSSE 243
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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