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Conserved domains on  [gi|258613912|ref|NP_795954|]
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ankyrin and armadillo repeat-containing protein isoform 1 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
526-709 1.72e-15

Ankyrin repeat [Signal transduction mechanisms];


:

Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 78.84  E-value: 1.72e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  526 INVSDEAGYAIFHHAALHNRVSVICQLWSANFNVNQRrfimfsqadsskvdmkkERNGPTPLHLAAQACSLEATICLLCF 605
Cdd:COG0666    80 INAKDDGGNTLLHAAARNGDLEIVKLLLEAGADVNAR-----------------DKDGETPLHLAAYNGNLEIVKLLLEA 142

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  606 KADYTLTEKRGWMPIHFAAFYDNICILIALCRKDPSLleaEATAENQCTPLLLAATSGALDTIQYLFSLGANWRKTDTKG 685
Cdd:COG0666   143 GADVNAQDNDGNTPLHLAAANGNLEIVKLLLEAGADV---NARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDG 219

                         170       180
                  ....*....|....*....|....
gi 258613912  686 NNIIHLSVLAFHTEVLKYIIELNI 709
Cdd:COG0666   220 KTALDLAAENGNLEIVKLLLEAGA 243
PLN03200 super family cl33659
cellulose synthase-interactive protein; Provisional
 718-986 4.48e-13

cellulose synthase-interactive protein; Provisional


The actual alignment was detected with superfamily member PLN03200:

Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 74.75  E-value: 4.48e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  718 LVEMLQCESSKRRMMAVMSLEVICLANDRYWQCILDAGTIPALVNLLKSPQIKLQYKTVGLLSNISTHVSIVHAIVE-AG 796
Cdd:PLN03200  451 LISLLGLSSEQQQEYAVALLAILTDEVDESKWAITAAGGIPPLVQLLETGSQKAKEDSATVLWNLCCHSEDIRACVEsAG 530

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  797 GIPAVINLLTSDEPELHSRCAIILYDVAKCENKDVIAKYSGIpaLINLLSLNKESVLvNVMNCirVLCMGNESN--QQSM 874
Cdd:PLN03200  531 AVPALLWLLKNGGPKGQEIAAKTLTKLVRTADAATISQLTAL--LLGDLPESKVHVL-DVLGH--VLSVASLEDlvREGS 605

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  875 KDNNGIQYLIQFLSSDSDVLKALSSATIAEVARDNKEVQDAIAKEGAIPPLVTLFKGKQLSVQVKGAMAVESLANCNPLI 954
Cdd:PLN03200  606 AANDALRTLIQLLSSSKEETQEKAASVLADIFSSRQDLCESLATDEIINPCIKLLTNNTEAVATQSARALAALSRSIKEN 685

                         250       260       270
                  ....*....|....*....|....*....|...
gi 258613912  955 QK-EFLERELTKDLLKLLQAFQIDVKEQGAIAL 986
Cdd:PLN03200  686 RKvSYAAEDAIKPLIKLAKSSSIEVAEQAVCAL 718
SRP1 super family cl34886
Karyopherin (importin) alpha [Intracellular trafficking and secretion];
883-1129 1.99e-03

Karyopherin (importin) alpha [Intracellular trafficking and secretion];


The actual alignment was detected with superfamily member COG5064:

Pssm-ID: 227396 [Multi-domain]  Cd Length: 526  Bit Score: 42.57  E-value: 1.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  883 LIQFL-SSDSDVLKALSSATIAEVARDNKEVQDAIAKEGAIPPLVTLFKGKQLSVQVKGAMAVESLANCNPLIQKEFLER 961
Cdd:COG5064   119 FVEFMdEIQRDMLQFEAAWALTNIASGTTQQTKVVVDAGAVPLFIQLLSSTEDDVREQAVWALGNIAGDSEGCRDYVLQC 198

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  962 ELTKDLLKLLQAFQIDVKEQGAiALWALAGQTLKQQKYMAEQIgynliISMLLSPSAKMQYVGGEAVI-----ALS--KD 1034
Cdd:COG5064   199 GALEPLLGLLLSSAIHISMLRN-ATWTLSNLCRGKNPPPDWSN-----ISQALPILAKLIYSRDPEVLvdacwAISylSD 272

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912 1035 SRMHQNQICEGKGIAPlvRLLRINKIPEGTLLS-VIRAVGSICIGvahtsNPMSQQFVVEENALPVLIQLLrNHPSINIR 1113
Cdd:COG5064   273 GPNEKIQAVLDVGIPG--RLVELLSHESAKIQTpALRSVGNIVTG-----SDDQTQVIINCGALKAFRSLL-SSPKENIR 344

                         250
                  ....*....|....*.
gi 258613912 1114 VEVAFSLACIVLGNNS 1129
Cdd:COG5064   345 KEACWTISNITAGNTE 360
 
Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
526-709 1.72e-15

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 78.84  E-value: 1.72e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  526 INVSDEAGYAIFHHAALHNRVSVICQLWSANFNVNQRrfimfsqadsskvdmkkERNGPTPLHLAAQACSLEATICLLCF 605
Cdd:COG0666    80 INAKDDGGNTLLHAAARNGDLEIVKLLLEAGADVNAR-----------------DKDGETPLHLAAYNGNLEIVKLLLEA 142

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  606 KADYTLTEKRGWMPIHFAAFYDNICILIALCRKDPSLleaEATAENQCTPLLLAATSGALDTIQYLFSLGANWRKTDTKG 685
Cdd:COG0666   143 GADVNAQDNDGNTPLHLAAANGNLEIVKLLLEAGADV---NARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDG 219

                         170       180
                  ....*....|....*....|....
gi 258613912  686 NNIIHLSVLAFHTEVLKYIIELNI 709
Cdd:COG0666   220 KTALDLAAENGNLEIVKLLLEAGA 243
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 718-986 4.48e-13

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 74.75  E-value: 4.48e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  718 LVEMLQCESSKRRMMAVMSLEVICLANDRYWQCILDAGTIPALVNLLKSPQIKLQYKTVGLLSNISTHVSIVHAIVE-AG 796
Cdd:PLN03200  451 LISLLGLSSEQQQEYAVALLAILTDEVDESKWAITAAGGIPPLVQLLETGSQKAKEDSATVLWNLCCHSEDIRACVEsAG 530

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  797 GIPAVINLLTSDEPELHSRCAIILYDVAKCENKDVIAKYSGIpaLINLLSLNKESVLvNVMNCirVLCMGNESN--QQSM 874
Cdd:PLN03200  531 AVPALLWLLKNGGPKGQEIAAKTLTKLVRTADAATISQLTAL--LLGDLPESKVHVL-DVLGH--VLSVASLEDlvREGS 605

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  875 KDNNGIQYLIQFLSSDSDVLKALSSATIAEVARDNKEVQDAIAKEGAIPPLVTLFKGKQLSVQVKGAMAVESLANCNPLI 954
Cdd:PLN03200  606 AANDALRTLIQLLSSSKEETQEKAASVLADIFSSRQDLCESLATDEIINPCIKLLTNNTEAVATQSARALAALSRSIKEN 685

                         250       260       270
                  ....*....|....*....|....*....|...
gi 258613912  955 QK-EFLERELTKDLLKLLQAFQIDVKEQGAIAL 986
Cdd:PLN03200  686 RKvSYAAEDAIKPLIKLAKSSSIEVAEQAVCAL 718
Ank_2 pfam12796
Ankyrin repeats (3 copies);
587-682 2.34e-09

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 55.51  E-value: 2.34e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912   587 LHLAAQACSLEATICLLCFKADYTLTEKRGWMPIHFAAFYDNICILIALCRKDPSLLEaeataENQCTPLLLAATSGALD 666
Cdd:pfam12796    1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHADVNLK-----DNGRTALHYAARSGHLE 75

                           90
                   ....*....|....*.
gi 258613912   667 TIQYLFSLGANWRKTD 682
Cdd:pfam12796   76 IVKLLLEKGADINVKD 91
SRP1 COG5064
Karyopherin (importin) alpha [Intracellular trafficking and secretion];
718-877 2.13e-07

Karyopherin (importin) alpha [Intracellular trafficking and secretion];


Pssm-ID: 227396 [Multi-domain]  Cd Length: 526  Bit Score: 55.28  E-value: 2.13e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  718 LVEMLQCESSKRRMMAVMSLEVICLANDRYWQCILDAGTIPALVNLLKSPQIKLQYKTVGLLSNIST-HVSIVHAIVEAG 796
Cdd:COG5064   290 LVELLSHESAKIQTPALRSVGNIVTGSDDQTQVIINCGALKAFRSLLSSPKENIRKEACWTISNITAgNTEQIQAVIDAN 369

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  797 GIPAVINLLTSDEPELHSR-CAIILYDVAKCENKDVIAKY----SGIPALINLLSLNKESVLVNVMNCIRVLCMGNESNQ 871
Cdd:COG5064   370 LIPPLIHLLSSAEYKIKKEaCWAISNATSGGLNRPDIIRYlvsqGFIKPLCDLLDVVDNKIIEVALDAIENILKVGEQDR 449


                  ....*.
gi 258613912  872 QSMKDN 877
Cdd:COG5064   450 LRYGKN 455
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 744-784 3.73e-05

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 42.06  E-value: 3.73e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 258613912   744 NDRYWQCILDAGTIPALVNLLKSPQIKLQYKTVGLLSNIST 784
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLAA 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 749-783 5.34e-04

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 38.95  E-value: 5.34e-04
                            10        20        30
                    ....*....|....*....|....*....|....*
gi 258613912    749 QCILDAGTIPALVNLLKSPQIKLQYKTVGLLSNIS 783
Cdd:smart00185    6 QAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
SRP1 COG5064
Karyopherin (importin) alpha [Intracellular trafficking and secretion];
883-1129 1.99e-03

Karyopherin (importin) alpha [Intracellular trafficking and secretion];


Pssm-ID: 227396 [Multi-domain]  Cd Length: 526  Bit Score: 42.57  E-value: 1.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  883 LIQFL-SSDSDVLKALSSATIAEVARDNKEVQDAIAKEGAIPPLVTLFKGKQLSVQVKGAMAVESLANCNPLIQKEFLER 961
Cdd:COG5064   119 FVEFMdEIQRDMLQFEAAWALTNIASGTTQQTKVVVDAGAVPLFIQLLSSTEDDVREQAVWALGNIAGDSEGCRDYVLQC 198

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  962 ELTKDLLKLLQAFQIDVKEQGAiALWALAGQTLKQQKYMAEQIgynliISMLLSPSAKMQYVGGEAVI-----ALS--KD 1034
Cdd:COG5064   199 GALEPLLGLLLSSAIHISMLRN-ATWTLSNLCRGKNPPPDWSN-----ISQALPILAKLIYSRDPEVLvdacwAISylSD 272

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912 1035 SRMHQNQICEGKGIAPlvRLLRINKIPEGTLLS-VIRAVGSICIGvahtsNPMSQQFVVEENALPVLIQLLrNHPSINIR 1113
Cdd:COG5064   273 GPNEKIQAVLDVGIPG--RLVELLSHESAKIQTpALRSVGNIVTG-----SDDQTQVIINCGALKAFRSLL-SSPKENIR 344

                         250
                  ....*....|....*.
gi 258613912 1114 VEVAFSLACIVLGNNS 1129
Cdd:COG5064   345 KEACWTISNITAGNTE 360
PHA02875 PHA02875
ankyrin repeat protein; Provisional
 581-677 4.70e-03

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 41.13  E-value: 4.70e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  581 RNGPTPLHLAAQACSLEATICLLCFKADYTLTEKRGWMPIHFAAFYDNICiLIALCRKDPSLLEAEATAenQCTPLLLAA 660
Cdd:PHA02875  100 KDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIK-GIELLIDHKACLDIEDCC--GCTPLIIAM 176

                          90
                  ....*....|....*..
gi 258613912  661 TSGALDTIQYLFSLGAN 677
Cdd:PHA02875  177 AKGDIAICKMLLDSGAN 193
 
Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
526-709 1.72e-15

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 78.84  E-value: 1.72e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  526 INVSDEAGYAIFHHAALHNRVSVICQLWSANFNVNQRrfimfsqadsskvdmkkERNGPTPLHLAAQACSLEATICLLCF 605
Cdd:COG0666    80 INAKDDGGNTLLHAAARNGDLEIVKLLLEAGADVNAR-----------------DKDGETPLHLAAYNGNLEIVKLLLEA 142

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  606 KADYTLTEKRGWMPIHFAAFYDNICILIALCRKDPSLleaEATAENQCTPLLLAATSGALDTIQYLFSLGANWRKTDTKG 685
Cdd:COG0666   143 GADVNAQDNDGNTPLHLAAANGNLEIVKLLLEAGADV---NARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDG 219

                         170       180
                  ....*....|....*....|....
gi 258613912  686 NNIIHLSVLAFHTEVLKYIIELNI 709
Cdd:COG0666   220 KTALDLAAENGNLEIVKLLLEAGA 243
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 718-986 4.48e-13

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 74.75  E-value: 4.48e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  718 LVEMLQCESSKRRMMAVMSLEVICLANDRYWQCILDAGTIPALVNLLKSPQIKLQYKTVGLLSNISTHVSIVHAIVE-AG 796
Cdd:PLN03200  451 LISLLGLSSEQQQEYAVALLAILTDEVDESKWAITAAGGIPPLVQLLETGSQKAKEDSATVLWNLCCHSEDIRACVEsAG 530

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  797 GIPAVINLLTSDEPELHSRCAIILYDVAKCENKDVIAKYSGIpaLINLLSLNKESVLvNVMNCirVLCMGNESN--QQSM 874
Cdd:PLN03200  531 AVPALLWLLKNGGPKGQEIAAKTLTKLVRTADAATISQLTAL--LLGDLPESKVHVL-DVLGH--VLSVASLEDlvREGS 605

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  875 KDNNGIQYLIQFLSSDSDVLKALSSATIAEVARDNKEVQDAIAKEGAIPPLVTLFKGKQLSVQVKGAMAVESLANCNPLI 954
Cdd:PLN03200  606 AANDALRTLIQLLSSSKEETQEKAASVLADIFSSRQDLCESLATDEIINPCIKLLTNNTEAVATQSARALAALSRSIKEN 685

                         250       260       270
                  ....*....|....*....|....*....|...
gi 258613912  955 QK-EFLERELTKDLLKLLQAFQIDVKEQGAIAL 986
Cdd:PLN03200  686 RKvSYAAEDAIKPLIKLAKSSSIEVAEQAVCAL 718
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
526-709 5.16e-13

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 71.52  E-value: 5.16e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  526 INVSDEAGYAIFHHAALHNRVSVICQLWSANFNVNQrrfimfsqadsskvdmkKERNGPTPLHLAAQACSLEATICLLCF 605
Cdd:COG0666   113 VNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNA-----------------QDNDGNTPLHLAAANGNLEIVKLLLEA 175

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  606 KADYTLTEKRGWMPIHFAAFYDNICILIALCRKDPSLleaEATAENQCTPLLLAATSGALDTIQYLFSLGANWRKTDTKG 685
Cdd:COG0666   176 GADVNARDNDGETPLHLAAENGHLEIVKLLLEAGADV---NAKDNDGKTALDLAAENGNLEIVKLLLEAGADLNAKDKDG 252

                         170       180
                  ....*....|....*....|....
gi 258613912  686 NNIIHLSVLAFHTEVLKYIIELNI 709
Cdd:COG0666   253 LTALLLAAAAGAALIVKLLLLALL 276
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
565-706 1.46e-10

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 63.82  E-value: 1.46e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  565 IMFSQADSSKVDMKKERNGPTPLHLAAQACSLEATICLLCFKADYTLTEKRGWMPIHFAAFYDNICILIALCRK--DPsl 642
Cdd:COG0666    69 VALLLLAAGADINAKDDGGNTLLHAAARNGDLEIVKLLLEAGADVNARDKDGETPLHLAAYNGNLEIVKLLLEAgaDV-- 146

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 258613912  643 leaEATAENQCTPLLLAATSGALDTIQYLFSLGANWRKTDTKGNNIIHLSVLAFHTEVLKYIIE 706
Cdd:COG0666   147 ---NAQDNDGNTPLHLAAANGNLEIVKLLLEAGADVNARDNDGETPLHLAAENGHLEIVKLLLE 207
Ank_2 pfam12796
Ankyrin repeats (3 copies);
587-682 2.34e-09

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 55.51  E-value: 2.34e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912   587 LHLAAQACSLEATICLLCFKADYTLTEKRGWMPIHFAAFYDNICILIALCRKDPSLLEaeataENQCTPLLLAATSGALD 666
Cdd:pfam12796    1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHADVNLK-----DNGRTALHYAARSGHLE 75

                           90
                   ....*....|....*.
gi 258613912   667 TIQYLFSLGANWRKTD 682
Cdd:pfam12796   76 IVKLLLEKGADINVKD 91
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 736-1055 1.95e-07

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 56.26  E-value: 1.95e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  736 SLEVICLANDRYWQCILDAGTIPALVNLLKSPQIKLQYKTVGLLSN-ISTHVSIVHAIVEAGGIPAVINLLTS-DEPELH 813
Cdd:PLN03200  170 ALRNLCGSTDGFWSATLEAGGVDILVKLLSSGNSDAQANAASLLARlMMAFESSISKVLDAGAVKQLLKLLGQgNEVSVR 249

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  814 SRCAIILYDV-AKC-ENKDVIAKYSGIPALIN-LLSLNKEsvlvnvmncirvlCMGNESnQQSMKDN---------NGIQ 881
Cdd:PLN03200  250 AEAAGALEALsSQSkEAKQAIADAGGIPALINaTVAPSKE-------------FMQGEF-AQALQENamgalanicGGMS 315

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  882 YLIQFL--SSDS--------DVLKALSSA-TIAEVARDNKEVQDAIAKEGAippLVTLFKGK--QLsVQVKGAMAVESLA 948
Cdd:PLN03200  316 ALILYLgeLSESprspapiaDTLGALAYAlMVFDSSAESTRAFDPTVIEQI---LVKLLKPRdtKL-VQERIIEALASLY 391

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  949 NcNPLIQKEFLERELTKDLLKLLQAFQIDVKEQGAIALWALAGQTLKQQKYMAEQIGYNLIISMLLSPSAKMQYVGGEAV 1028
Cdd:PLN03200  392 G-NAYLSRKLNHAEAKKVLVGLITMATADVQEELIRALSSLCCGKGGLWEALGGREGVQLLISLLGLSSEQQQEYAVALL 470

                         330       340       350
                  ....*....|....*....|....*....|....
gi 258613912 1029 IALSkdsrmhqNQICEGK-------GIAPLVRLL 1055
Cdd:PLN03200  471 AILT-------DEVDESKwaitaagGIPPLVQLL 497
SRP1 COG5064
Karyopherin (importin) alpha [Intracellular trafficking and secretion];
718-877 2.13e-07

Karyopherin (importin) alpha [Intracellular trafficking and secretion];


Pssm-ID: 227396 [Multi-domain]  Cd Length: 526  Bit Score: 55.28  E-value: 2.13e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  718 LVEMLQCESSKRRMMAVMSLEVICLANDRYWQCILDAGTIPALVNLLKSPQIKLQYKTVGLLSNIST-HVSIVHAIVEAG 796
Cdd:COG5064   290 LVELLSHESAKIQTPALRSVGNIVTGSDDQTQVIINCGALKAFRSLLSSPKENIRKEACWTISNITAgNTEQIQAVIDAN 369

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  797 GIPAVINLLTSDEPELHSR-CAIILYDVAKCENKDVIAKY----SGIPALINLLSLNKESVLVNVMNCIRVLCMGNESNQ 871
Cdd:COG5064   370 LIPPLIHLLSSAEYKIKKEaCWAISNATSGGLNRPDIIRYlvsqGFIKPLCDLLDVVDNKIIEVALDAIENILKVGEQDR 449


                  ....*.
gi 258613912  872 QSMKDN 877
Cdd:COG5064   450 LRYGKN 455
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 757-1139 8.88e-07

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 53.95  E-value: 8.88e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  757 IPALVNLLKS--PQIKLQYKTVglLSNISTHVSIVHAIVEAGGIPAVINLLTSDEPELHSRCAIILYDVAKCENKD-VIA 833
Cdd:PLN03200   60 MPLLVSLLRSgtLGAKVNAAAV--LGVLCKEEDLRVKVLLGGCIPPLLSLLKSGSAEAQKAAAEAIYAVSSGGLSDhVGS 137

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  834 K-YSG---IPALINLLS--LNKESVLVN-VMNCIRVLCMGNESNQQSMKDNNGIQYLIQFLSSDsdvlkalSSATIAEVA 906
Cdd:PLN03200  138 KiFSTegvVPSLWDQLQpgNKQDKVVEGlLTGALRNLCGSTDGFWSATLEAGGVDILVKLLSSG-------NSDAQANAA 210

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  907 rdnkevqdaiakegaipplvtlfkgkqlSVQVKGAMAVESlancnpLIQKeFLERELTKDLLKLL-QAFQIDVKEQGAIA 985
Cdd:PLN03200  211 ----------------------------SLLARLMMAFES------SISK-VLDAGAVKQLLKLLgQGNEVSVRAEAAGA 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  986 LWALAGQTLKQQKYMAEQIGYNLIISMLLSPSAK-MQyvgGEAVIALSKDSRMHQNQICEGKG--IAPLVRLLRINKIPE 1062
Cdd:PLN03200  256 LEALSSQSKEAKQAIADAGGIPALINATVAPSKEfMQ---GEFAQALQENAMGALANICGGMSalILYLGELSESPRSPA 332

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912 1063 ------GTLLSVIRAVGSICiGVAHTSNPMsqqfVVEEnalpVLIQLLRNHPSINIRVEVAFSLACIvLGNNSLKKELQN 1136
Cdd:PLN03200  333 piadtlGALAYALMVFDSSA-ESTRAFDPT----VIEQ----ILVKLLKPRDTKLVQERIIEALASL-YGNAYLSRKLNH 402


                  ...
gi 258613912 1137 DEG 1139
Cdd:PLN03200  403 AEA 405
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
582-706 6.80e-06

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 49.57  E-value: 6.80e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  582 NGPTPLHLAAQACSLEATICLLCFKADYTLTEKRGWMPIHFAAFYDNICILIALCRKDpslLEAEATAENQCTPLLLAAT 661
Cdd:COG0666    20 LLALLLLAAALLLLLLLLLLLLLALLALALADALGALLLLAAALAGDLLVALLLLAAG---ADINAKDDGGNTLLHAAAR 96

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 258613912  662 SGALDTIQYLFSLGANWRKTDTKGNNIIHLSVLAFHTEVLKYIIE 706
Cdd:COG0666    97 NGDLEIVKLLLEAGADVNARDKDGETPLHLAAYNGNLEIVKLLLE 141
Ank_4 pfam13637
Ankyrin repeats (many copies);
654-705 8.87e-06

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 44.19  E-value: 8.87e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|..
gi 258613912   654 TPLLLAATSGALDTIQYLFSLGANWRKTDTKGNNIIHLSVLAFHTEVLKYII 705
Cdd:pfam13637    3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 730-1137 2.37e-05

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 49.33  E-value: 2.37e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  730 RMMAVMSLEVICLANDRYWQCILDAGTIPALVNLLKSPQIK---------LQYKTVGLLSNISthvsivhaiveaGGIPA 800
Cdd:PLN03200  249 RAEAAGALEALSSQSKEAKQAIADAGGIPALINATVAPSKEfmqgefaqaLQENAMGALANIC------------GGMSA 316

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  801 VINLL--TSDEPELHSRCAIILYDVA--------KCENKDVIAKYSGIPALINLL-----------------SL------ 847
Cdd:PLN03200  317 LILYLgeLSESPRSPAPIADTLGALAyalmvfdsSAESTRAFDPTVIEQILVKLLkprdtklvqeriiealaSLygnayl 396

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  848 -----NKES--VLV------------NVMNCIRVLCMGNESNQQSMKDNNGIQYLIQFLSSDSDVLKALSSATIAEVARD 908
Cdd:PLN03200  397 srklnHAEAkkVLVglitmatadvqeELIRALSSLCCGKGGLWEALGGREGVQLLISLLGLSSEQQQEYAVALLAILTDE 476

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  909 NKEVQDAIAKEGAIPPLVTLF-----KGKQLSVQVKGAM---------AVES----------LANCNPLIQkEFLERELT 964
Cdd:PLN03200  477 VDESKWAITAAGGIPPLVQLLetgsqKAKEDSATVLWNLcchsediraCVESagavpallwlLKNGGPKGQ-EIAAKTLT 555

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  965 K-----------DLLKLL-------QAFQIDVKEQgaiaLWALAGQTLKQQKYMAEQIGYNLIISMLLSPSAKMQYVGGE 1026
Cdd:PLN03200  556 KlvrtadaatisQLTALLlgdlpesKVHVLDVLGH----VLSVASLEDLVREGSAANDALRTLIQLLSSSKEETQEKAAS 631

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912 1027 A---VIALSKDsrmhqnqICEG----KGIAPLVRLLRINkiPEGTLLSVIRAVGSIcIGVAHTSNPMSQqfvVEENALPV 1099
Cdd:PLN03200  632 VladIFSSRQD-------LCESlatdEIINPCIKLLTNN--TEAVATQSARALAAL-SRSIKENRKVSY---AAEDAIKP 698

                         490       500       510       520
                  ....*....|....*....|....*....|....*....|
gi 258613912 1100 LIQLLRNHPsinIRV-EVAFS-LACIVLGNNSLKKELQND 1137
Cdd:PLN03200  699 LIKLAKSSS---IEVaEQAVCaLANLLSDPEVAAEALAED 735
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 744-784 3.73e-05

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 42.06  E-value: 3.73e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 258613912   744 NDRYWQCILDAGTIPALVNLLKSPQIKLQYKTVGLLSNIST 784
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLAA 41
SRP1 COG5064
Karyopherin (importin) alpha [Intracellular trafficking and secretion];
749-1065 4.85e-05

Karyopherin (importin) alpha [Intracellular trafficking and secretion];


Pssm-ID: 227396 [Multi-domain]  Cd Length: 526  Bit Score: 47.96  E-value: 4.85e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  749 QCILDAGTIPALVNLLKSPQIK-LQYKTVGLLSNISTHVSI-VHAIVEAGGIPAVINLLTSDEPELHSRCAIILYDVA-- 824
Cdd:COG5064   108 QPVIDAGVVPRFVEFMDEIQRDmLQFEAAWALTNIASGTTQqTKVVVDAGAVPLFIQLLSSTEDDVREQAVWALGNIAgd 187

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  825 KCENKDVIAKYSGIPALINLLSLNKE--SVLVNVMNCIRVLCMGN--ESNQQSMKdnNGIQYLIQFLSS-DSDVLKALSS 899
Cdd:COG5064   188 SEGCRDYVLQCGALEPLLGLLLSSAIhiSMLRNATWTLSNLCRGKnpPPDWSNIS--QALPILAKLIYSrDPEVLVDACW 265

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  900 AtIAEVARDNKEVQDAIAKEGAIPPLVTLFKGKQLSVQVKGAMAVESLANCNPLIQKEFLERELTKDLLKLLQAFQIDVK 979
Cdd:COG5064   266 A-ISYLSDGPNEKIQAVLDVGIPGRLVELLSHESAKIQTPALRSVGNIVTGSDDQTQVIINCGALKAFRSLLSSPKENIR 344

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  980 EQgaiALWALAGQTLKQQKYMAEQIGYNLIISMLLSPSAKMQYVGGEAVIALSKDSRMHQNQ------ICEGKGIAPLVR 1053
Cdd:COG5064   345 KE---ACWTISNITAGNTEQIQAVIDANLIPPLIHLLSSAEYKIKKEACWAISNATSGGLNRpdiiryLVSQGFIKPLCD 421

                         330
                  ....*....|....
gi 258613912 1054 LLRI--NKIPEGTL 1065
Cdd:COG5064   422 LLDVvdNKIIEVAL 435
Ank_2 pfam12796
Ankyrin repeats (3 copies);
656-706 1.25e-04

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 42.41  E-value: 1.25e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 258613912   656 LLLAATSGALDTIQYLFSLGANWRKTDTKGNNIIHLSVLAFHTEVLKYIIE 706
Cdd:pfam12796    1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLE 51
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 749-783 5.34e-04

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 38.95  E-value: 5.34e-04
                            10        20        30
                    ....*....|....*....|....*....|....*
gi 258613912    749 QCILDAGTIPALVNLLKSPQIKLQYKTVGLLSNIS 783
Cdd:smart00185    6 QAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
HEAT COG1413
HEAT repeat [General function prediction only];
714-846 1.02e-03

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 40.77  E-value: 1.02e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  714 VWETLVEMLQCESSKRRMMAVMSLEVIClandrywqcilDAGTIPALVNLLKSPQIKLQYKTVGLLSNISTHVSivhaiv 793
Cdd:COG1413    17 AVPALIAALADEDPDVRAAAARALGRLG-----------DPRAVPALLEALKDPDPEVRAAAAEALGRIGDPEA------ 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 258613912  794 eaggIPAVINLLTSDEPELHSRCAIILYDvakcenkdvIAKYSGIPALINLLS 846
Cdd:COG1413    80 ----VPALIAALKDEDPEVRRAAAEALGR---------LGDPAAVPALLEALK 119
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 742-925 1.05e-03

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 43.94  E-value: 1.05e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  742 LANDRYWQCILDAGTIPALVNLLKSPQIKLQYKTVGLLSNISThvSIVHAIVEAGGIPAVINLLTSDEP----ELHSRCA 817
Cdd:PLN03200 1556 LAEEHFQQDITTQNAVVPLVRLAGIGILSLQQRAVKALESISL--SWPKAVADAGGIFELSKVILQADPqpphALWESAA 1633

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  818 IILYDVAKCeNKDVIAKYSgIPALINLLSLNKESVLVNVMNCIRVLCMGNESNQQSMKDNNGIQYLIQFLSSDSdvlKAL 897
Cdd:PLN03200 1634 SVLSNILRF-SSEYYFEVP-VAVLVKLLRSTSESTVVVALNALLVLERDDSSSAEQMAESGAIEALLELLRSHQ---CEE 1708

                         170       180
                  ....*....|....*....|....*...
gi 258613912  898 SSATIAEVARDNKEVQDAIAKEGAIPPL 925
Cdd:PLN03200 1709 AAARLLEALFNNVKVREMKATKYAIAPL 1736
Ank_4 pfam13637
Ankyrin repeats (many copies);
585-635 1.98e-03

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 37.64  E-value: 1.98e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 258613912   585 TPLHLAAQACSLEATICLLCFKADYTLTEKRGWMPIHFAAFYDNICILIAL 635
Cdd:pfam13637    3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLL 53
SRP1 COG5064
Karyopherin (importin) alpha [Intracellular trafficking and secretion];
883-1129 1.99e-03

Karyopherin (importin) alpha [Intracellular trafficking and secretion];


Pssm-ID: 227396 [Multi-domain]  Cd Length: 526  Bit Score: 42.57  E-value: 1.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  883 LIQFL-SSDSDVLKALSSATIAEVARDNKEVQDAIAKEGAIPPLVTLFKGKQLSVQVKGAMAVESLANCNPLIQKEFLER 961
Cdd:COG5064   119 FVEFMdEIQRDMLQFEAAWALTNIASGTTQQTKVVVDAGAVPLFIQLLSSTEDDVREQAVWALGNIAGDSEGCRDYVLQC 198

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  962 ELTKDLLKLLQAFQIDVKEQGAiALWALAGQTLKQQKYMAEQIgynliISMLLSPSAKMQYVGGEAVI-----ALS--KD 1034
Cdd:COG5064   199 GALEPLLGLLLSSAIHISMLRN-ATWTLSNLCRGKNPPPDWSN-----ISQALPILAKLIYSRDPEVLvdacwAISylSD 272

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912 1035 SRMHQNQICEGKGIAPlvRLLRINKIPEGTLLS-VIRAVGSICIGvahtsNPMSQQFVVEENALPVLIQLLrNHPSINIR 1113
Cdd:COG5064   273 GPNEKIQAVLDVGIPG--RLVELLSHESAKIQTpALRSVGNIVTG-----SDDQTQVIINCGALKAFRSLL-SSPKENIR 344

                         250
                  ....*....|....*.
gi 258613912 1114 VEVAFSLACIVLGNNS 1129
Cdd:COG5064   345 KEACWTISNITAGNTE 360
Ank_5 pfam13857
Ankyrin repeats (many copies);
579-623 3.41e-03

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 36.94  E-value: 3.41e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 258613912   579 KERNGPTPLHLAAQACSLEATICLLCFKADYTLTEKRGWMPIHFA 623
Cdd:pfam13857   12 LDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
PHA02875 PHA02875
ankyrin repeat protein; Provisional
 581-677 4.70e-03

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 41.13  E-value: 4.70e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 258613912  581 RNGPTPLHLAAQACSLEATICLLCFKADYTLTEKRGWMPIHFAAFYDNICiLIALCRKDPSLLEAEATAenQCTPLLLAA 660
Cdd:PHA02875  100 KDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIK-GIELLIDHKACLDIEDCC--GCTPLIIAM 176

                          90
                  ....*....|....*..
gi 258613912  661 TSGALDTIQYLFSLGAN 677
Cdd:PHA02875  177 AKGDIAICKMLLDSGAN 193
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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