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Conserved domains on  [gi|30410047|ref|NP_848516|]
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late cornified envelope protein 2C [Homo sapiens]

Protein Classification

LCE domain-containing protein( domain architecture ID 10631052)

LCE domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
LCE pfam14672
Late cornified envelope; This is a family of late cornified envelope proteins that are ...
 60-110 1.07e-05

Late cornified envelope; This is a family of late cornified envelope proteins that are expressed in skin.


:

Pssm-ID: 464253  Cd Length: 94  Bit Score: 40.60  E-value: 1.07e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 30410047    60 SGGCCSSGAGGCSLSHHRPRLFHRRRHQSPDCCES---EPSGGSGCCHSSGGCC 110
Cdd:pfam14672  41 SGGCCPSSEGGCCLSHHRHRRSHRCRRQSSDCCDRgsgQQSGGSGCGHSSGGCC 94
 
Name Accession Description Interval E-value
LCE pfam14672
Late cornified envelope; This is a family of late cornified envelope proteins that are ...
 60-110 1.07e-05

Late cornified envelope; This is a family of late cornified envelope proteins that are expressed in skin.


Pssm-ID: 464253  Cd Length: 94  Bit Score: 40.60  E-value: 1.07e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 30410047    60 SGGCCSSGAGGCSLSHHRPRLFHRRRHQSPDCCES---EPSGGSGCCHSSGGCC 110
Cdd:pfam14672  41 SGGCCPSSEGGCCLSHHRHRRSHRCRRQSSDCCDRgsgQQSGGSGCGHSSGGCC 94
 
Name Accession Description Interval E-value
LCE pfam14672
Late cornified envelope; This is a family of late cornified envelope proteins that are ...
 60-110 1.07e-05

Late cornified envelope; This is a family of late cornified envelope proteins that are expressed in skin.


Pssm-ID: 464253  Cd Length: 94  Bit Score: 40.60  E-value: 1.07e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 30410047    60 SGGCCSSGAGGCSLSHHRPRLFHRRRHQSPDCCES---EPSGGSGCCHSSGGCC 110
Cdd:pfam14672  41 SGGCCPSSEGGCCLSHHRHRRSHRCRRQSSDCCDRgsgQQSGGSGCGHSSGGCC 94
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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