|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
57-255 |
1.63e-28 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 116.19 E-value: 1.63e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 57 ERVFLQNNRIGLLqPGHFS--PAMVTLWIYSNNITYIhPSTFEGFVHLEELDLGDNrQLRTLaPETFQGLVKLHALYLYK 134
Cdd:COG4886 116 ESLDLSGNQLTDL-PEELAnlTNLKELDLSNNQLTDL-PEPLGNLTNLKSLDLSNN-QLTDL-PEELGNLTNLKELDLSN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 135 CGLSALPAgVFGGLHSLQYLYLQDNHIEYLQDDIfVDLVNLSHLFLHGNKLWSLgPGtFRGLVNLDRLLLHENQLQWVhh 214
Cdd:COG4886 192 NQITDLPE-PLGNLTNLEELDLSGNQLTDLPEPL-ANLTNLETLDLSNNQLTDL-PE-LGNLTNLEELDLSNNQLTDL-- 265
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 30425553 215 KAFHDLRRLTTLFLFNNSLSELQGECLAPLGALEFLRLNGN 255
Cdd:COG4886 266 PPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLL 306
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
174-233 |
4.75e-12 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 60.62 E-value: 4.75e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 174 NLSHLFLHGNKLWSLGPGTFRGLVNLDRLLLHENQLQWVHHKAFHDLRRLTTLFLFNNSL 233
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
126-255 |
4.35e-11 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 62.50 E-value: 4.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 126 KLHALYLYKCGLSALPAgvFGGLHSLQYLYLQDNHIEYLQDdiFVDLVNLSHLFLHGNKLWSLGPgtFRGLVNLDRLLLH 205
Cdd:cd21340 3 RITHLYLNDKNITKIDN--LSLCKNLKVLYLYDNKITKIEN--LEFLTNLTHLYLQNNQIEKIEN--LENLVNLKKLYLG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 206 ENQLQWVhhKAFHDLRRLTTL------------FLF------------------NNSLSELqgECLAPLGALEFLRLNGN 255
Cdd:cd21340 77 GNRISVV--EGLENLTNLEELhienqrlppgekLTFdprslaalsnslrvlnisGNNIDSL--EPLAPLRNLEQLDASNN 152
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
61-255 |
5.34e-09 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 58.32 E-value: 5.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 61 LQNNRIGLLQPGHFSPAMVTLWIYSNNITYIHPSTFEGFVHLEELDLGDNrQLRTLAPETFQGLVKLHALYLYKCGLSAL 140
Cdd:PLN00113 125 LSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGN-VLVGKIPNSLTNLTSLEFLTLASNQLVGQ 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 141 PAGVFGGLHSLQYLYLQDNHieyLQDDIFVD---LVNLSHLFLHGNKLWSLGPGTFRGLVNLDRLLLHENQLQWVHHKAF 217
Cdd:PLN00113 204 IPRELGQMKSLKWIYLGYNN---LSGEIPYEiggLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSI 280
|
170 180 190
....*....|....*....|....*....|....*...
gi 30425553 218 HDLRRLTTLFLFNNSLSELQGECLAPLGALEFLRLNGN 255
Cdd:PLN00113 281 FSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSN 318
|
|
| LRRCT |
smart00082 |
Leucine rich repeat C-terminal domain; |
255-300 |
1.20e-03 |
|
Leucine rich repeat C-terminal domain;
Pssm-ID: 214507 [Multi-domain] Cd Length: 51 Bit Score: 36.64 E-value: 1.20e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 30425553 255 NPWDCGCRARSLWEWLQRFRGSSSAVP--CVSPGLRHGQDLKLLRAED 300
Cdd:smart00082 1 NPFICDCELRWLLRWLQANEHLQDPVDlrCASPSSLRGPLLELLHSEF 48
|
|
| LRR |
smart00370 |
Leucine-rich repeats, outliers; |
172-195 |
9.60e-03 |
|
Leucine-rich repeats, outliers;
Pssm-ID: 197688 [Multi-domain] Cd Length: 24 Bit Score: 33.48 E-value: 9.60e-03
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
57-255 |
1.63e-28 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 116.19 E-value: 1.63e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 57 ERVFLQNNRIGLLqPGHFS--PAMVTLWIYSNNITYIhPSTFEGFVHLEELDLGDNrQLRTLaPETFQGLVKLHALYLYK 134
Cdd:COG4886 116 ESLDLSGNQLTDL-PEELAnlTNLKELDLSNNQLTDL-PEPLGNLTNLKSLDLSNN-QLTDL-PEELGNLTNLKELDLSN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 135 CGLSALPAgVFGGLHSLQYLYLQDNHIEYLQDDIfVDLVNLSHLFLHGNKLWSLgPGtFRGLVNLDRLLLHENQLQWVhh 214
Cdd:COG4886 192 NQITDLPE-PLGNLTNLEELDLSGNQLTDLPEPL-ANLTNLETLDLSNNQLTDL-PE-LGNLTNLEELDLSNNQLTDL-- 265
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 30425553 215 KAFHDLRRLTTLFLFNNSLSELQGECLAPLGALEFLRLNGN 255
Cdd:COG4886 266 PPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLL 306
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
92-255 |
1.05e-24 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 105.40 E-value: 1.05e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 92 HPSTFEGFVHLEELDLGDNrQLRTLaPETFQGLVKLHALYLYKCGLSALPAgVFGGLHSLQYLYLQDNHIEYLQDDIFvD 171
Cdd:COG4886 105 GNEELSNLTNLESLDLSGN-QLTDL-PEELANLTNLKELDLSNNQLTDLPE-PLGNLTNLKSLDLSNNQLTDLPEELG-N 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 172 LVNLSHLFLHGNKLWSLgPGTFRGLVNLDRLLLHENQLQWVhHKAFHDLRRLTTLFLFNNSLSELqgECLAPLGALEFLR 251
Cdd:COG4886 181 LTNLKELDLSNNQITDL-PEPLGNLTNLEELDLSGNQLTDL-PEPLANLTNLETLDLSNNQLTDL--PELGNLTNLEELD 256
|
....
gi 30425553 252 LNGN 255
Cdd:COG4886 257 LSNN 260
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
100-255 |
6.83e-17 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 82.29 E-value: 6.83e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 100 VHLEELDLGDNRQLRTLAPETFQGLVKLHALYLYKCGLsalpagvFGGLHSLQYLYLQDNHIEYLQDDIFvDLVNLSHLF 179
Cdd:COG4886 71 LLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEE-------LSNLTNLESLDLSGNQLTDLPEELA-NLTNLKELD 142
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 30425553 180 LHGNKLWSLgPGTFRGLVNLDRLLLHENQLQWVhHKAFHDLRRLTTLFLFNNSLSELQGEcLAPLGALEFLRLNGN 255
Cdd:COG4886 143 LSNNQLTDL-PEPLGNLTNLKSLDLSNNQLTDL-PEELGNLTNLKELDLSNNQITDLPEP-LGNLTNLEELDLSGN 215
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
174-233 |
4.75e-12 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 60.62 E-value: 4.75e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 174 NLSHLFLHGNKLWSLGPGTFRGLVNLDRLLLHENQLQWVHHKAFHDLRRLTTLFLFNNSL 233
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
57-255 |
7.89e-12 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 66.88 E-value: 7.89e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 57 ERVFLQNNRIGLLqPGHFS--PAMVTLWIYSNNITYIhPSTFEGFVHLEELDLGDNrQLRTLaPEtFQGLVKLHALYLYK 134
Cdd:COG4886 185 KELDLSNNQITDL-PEPLGnlTNLEELDLSGNQLTDL-PEPLANLTNLETLDLSNN-QLTDL-PE-LGNLTNLEELDLSN 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 135 CGLSALPAgvFGGLHSLQYLYLQDNHIEYLqddifvdlvNLSHLFLHGNKLWSLGPGTFRGLVNLDRLLLHENQLQWVHH 214
Cdd:COG4886 260 NQLTDLPP--LANLTNLKTLDLSNNQLTDL---------KLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLL 328
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 30425553 215 KAFHDLRRLTTLFLFNNSLSELQGECLAPLGALEFLRLNGN 255
Cdd:COG4886 329 LLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTL 369
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
150-209 |
2.20e-11 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 59.08 E-value: 2.20e-11
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 150 SLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGPGTFRGLVNLDRLLLHENQL 209
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
126-255 |
4.35e-11 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 62.50 E-value: 4.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 126 KLHALYLYKCGLSALPAgvFGGLHSLQYLYLQDNHIEYLQDdiFVDLVNLSHLFLHGNKLWSLGPgtFRGLVNLDRLLLH 205
Cdd:cd21340 3 RITHLYLNDKNITKIDN--LSLCKNLKVLYLYDNKITKIEN--LEFLTNLTHLYLQNNQIEKIEN--LENLVNLKKLYLG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 206 ENQLQWVhhKAFHDLRRLTTL------------FLF------------------NNSLSELqgECLAPLGALEFLRLNGN 255
Cdd:cd21340 77 GNRISVV--EGLENLTNLEELhienqrlppgekLTFdprslaalsnslrvlnisGNNIDSL--EPLAPLRNLEQLDASNN 152
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
126-185 |
5.14e-10 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 54.84 E-value: 5.14e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 126 KLHALYLYKCGLSALPAGVFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKL 185
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
101-161 |
5.50e-10 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 54.84 E-value: 5.50e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 30425553 101 HLEELDLGDNRqLRTLAPETFQGLVKLHALYLYKCGLSALPAGVFGGLHSLQYLYLQDNHI 161
Cdd:pfam13855 2 NLRSLDLSNNR-LTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
61-255 |
5.34e-09 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 58.32 E-value: 5.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 61 LQNNRIGLLQPGHFSPAMVTLWIYSNNITYIHPSTFEGFVHLEELDLGDNrQLRTLAPETFQGLVKLHALYLYKCGLSAL 140
Cdd:PLN00113 125 LSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGN-VLVGKIPNSLTNLTSLEFLTLASNQLVGQ 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 141 PAGVFGGLHSLQYLYLQDNHieyLQDDIFVD---LVNLSHLFLHGNKLWSLGPGTFRGLVNLDRLLLHENQLQWVHHKAF 217
Cdd:PLN00113 204 IPRELGQMKSLKWIYLGYNN---LSGEIPYEiggLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSI 280
|
170 180 190
....*....|....*....|....*....|....*...
gi 30425553 218 HDLRRLTTLFLFNNSLSELQGECLAPLGALEFLRLNGN 255
Cdd:PLN00113 281 FSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSN 318
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
198-256 |
9.49e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 51.37 E-value: 9.49e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 30425553 198 NLDRLLLHENQLQWVHHKAFHDLRRLTTLFLFNNSLSELQGECLAPLGALEFLRLNGNP 256
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNR 60
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
85-132 |
1.10e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 51.37 E-value: 1.10e-08
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 30425553 85 SNNITYIHPSTFEGFVHLEELDLGDNRqLRTLAPETFQGLVKLHALYL 132
Cdd:pfam13855 10 NNRLTSLDDGAFKGLSNLKVLDLSNNL-LTTLSPGAFSGLPSLRYLDL 56
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
57-111 |
9.04e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 45.98 E-value: 9.04e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 30425553 57 ERVFLQNNRIGLLQPGHFS--PAMVTLWIYSNNITYIHPSTFEGFVHLEELDLGDNR 111
Cdd:pfam13855 4 RSLDLSNNRLTSLDDGAFKglSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNR 60
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
60-183 |
1.31e-05 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 45.93 E-value: 1.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 60 FLQNNRIGLLQPGHFSPAMVTLWIYSNNITYIHPstFEGFVHLEELDLGDNR-----------QLRTL------------ 116
Cdd:cd21340 30 YLYDNKITKIENLEFLTNLTHLYLQNNQIEKIEN--LENLVNLKKLYLGGNRisvveglenltNLEELhienqrlppgek 107
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 30425553 117 ---APETFQGLVK-LHALYLYKCGLSALpaGVFGGLHSLQYLYLQDNHIEYLQD--DIFVDLVNLSHLFLHGN 183
Cdd:cd21340 108 ltfDPRSLAALSNsLRVLNISGNNIDSL--EPLAPLRNLEQLDASNNQISDLEEllDLLSSWPSLRELDLTGN 178
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
82-255 |
3.65e-05 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 46.38 E-value: 3.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 82 WIY--SNNITYIHPSTFEGFVHLEELDLGDNrQLRTLAPETFQGLVKLHALYLYKCGLSA-LPAGVFGgLHSLQYLYLQD 158
Cdd:PLN00113 216 WIYlgYNNLSGEIPYEIGGLTSLNHLDLVYN-NLTGPIPSSLGNLKNLQYLFLYQNKLSGpIPPSIFS-LQKLISLDLSD 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 159 NHIEYLQDDIFVDLVNLSHLFLHGNK-------------------LWSlgpGTFRGLV--------NLDRLLLHENQLQW 211
Cdd:PLN00113 294 NSLSGEIPELVIQLQNLEILHLFSNNftgkipvaltslprlqvlqLWS---NKFSGEIpknlgkhnNLTVLDLSTNNLTG 370
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 30425553 212 VHHKAFHDLRRLTTLFLFNNSlseLQGECLAPLGA---LEFLRLNGN 255
Cdd:PLN00113 371 EIPEGLCSSGNLFKLILFSNS---LEGEIPKSLGAcrsLRRVRLQDN 414
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
37-176 |
4.28e-05 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 45.84 E-value: 4.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 37 TVSCQAHNFAAIPEGIPVDSERVFLQNNRIGLLqPGHFSPAMVTLWIYSNNITYIHPSTFEGfvhLEELDLGDNrQLRTL 116
Cdd:PRK15370 224 TLYANSNQLTSIPATLPDTIQEMELSINRITEL-PERLPSALQSLDLFHNKISCLPENLPEE---LRYLSVYDN-SIRTL 298
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 117 APETFQGLVKlhaLYLYKCGLSALPAGVFGGLHSLQylyLQDNHIEYLQDDIFVDLVNLS 176
Cdd:PRK15370 299 PAHLPSGITH---LNVQSNSLTALPETLPPGLKTLE---AGENALTSLPASLPPELQVLD 352
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
102-256 |
7.00e-04 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 41.57 E-value: 7.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 102 LEELDLGDN------RQLRtLAPETFQGLVKLHALYLYKCGLSALPAGVFGGLH---SLQYLYLQDNHIEYLQDDIFVD- 171
Cdd:cd00116 53 LKELCLSLNetgripRGLQ-SLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLrssSLQELKLNNNGLGDRGLRLLAKg 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 172 ----LVNLSHLFLHGNKLWSLG----PGTFRGLVNLDRLLLHENQL--QWVHH--KAFHDLRRLTTLFLFNNSLSELQG- 238
Cdd:cd00116 132 lkdlPPALEKLVLGRNRLEGAScealAKALRANRDLKELNLANNGIgdAGIRAlaEGLKANCNLEVLDLNNNGLTDEGAs 211
|
170 180
....*....|....*....|.
gi 30425553 239 ---ECLAPLGALEFLRLNGNP 256
Cdd:cd00116 212 alaETLASLKSLEVLNLGDNN 232
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
150-256 |
7.03e-04 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 41.84 E-value: 7.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 150 SLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGPGTFRGLVNLDRLLLHENqlqwvhhKAFHDLRRLTTLFLF 229
Cdd:COG4886 49 LTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGN-------EELSNLTNLESLDLS 121
|
90 100
....*....|....*....|....*..
gi 30425553 230 NNSLSELqGECLAPLGALEFLRLNGNP 256
Cdd:COG4886 122 GNQLTDL-PEELANLTNLKELDLSNNQ 147
|
|
| LRRCT |
smart00082 |
Leucine rich repeat C-terminal domain; |
255-300 |
1.20e-03 |
|
Leucine rich repeat C-terminal domain;
Pssm-ID: 214507 [Multi-domain] Cd Length: 51 Bit Score: 36.64 E-value: 1.20e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 30425553 255 NPWDCGCRARSLWEWLQRFRGSSSAVP--CVSPGLRHGQDLKLLRAED 300
Cdd:smart00082 1 NPFICDCELRWLLRWLQANEHLQDPVDlrCASPSSLRGPLLELLHSEF 48
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
80-118 |
2.05e-03 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 36.07 E-value: 2.05e-03
10 20 30
....*....|....*....|....*....|....*....
gi 30425553 80 TLWIYSNNITYIhpSTFEGFVHLEELDLGDNRQLRTLAP 118
Cdd:pfam12799 5 VLDLSNNQITDI--PPLAKLPNLETLDLSGNNKITDLSD 41
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
150-187 |
3.13e-03 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 35.30 E-value: 3.13e-03
10 20 30
....*....|....*....|....*....|....*...
gi 30425553 150 SLQYLYLQDNHIEYLqdDIFVDLVNLSHLFLHGNKLWS 187
Cdd:pfam12799 2 NLEVLDLSNNQITDI--PPLAKLPNLETLDLSGNNKIT 37
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
81-255 |
4.26e-03 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 39.45 E-value: 4.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 81 LWIYSNNIT-YIHPSTFeGFVHLEELDLGDNrQLRTLAPETFQGLVKLHALYLYKCGLSALPAGVFGGLHSLQYLYLQDN 159
Cdd:PLN00113 265 LFLYQNKLSgPIPPSIF-SLQKLISLDLSDN-SLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSN 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30425553 160 HieyLQDDIFVDL---VNLSHLFLHGNKLWSLGPGTFRGLVNLDRLLLHENQLQWVHHKAFHDLRRLTTLFLFNNSLS-E 235
Cdd:PLN00113 343 K---FSGEIPKNLgkhNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSgE 419
|
170 180
....*....|....*....|
gi 30425553 236 LQGEcLAPLGALEFLRLNGN 255
Cdd:PLN00113 420 LPSE-FTKLPLVYFLDISNN 438
|
|
| LRR |
smart00370 |
Leucine-rich repeats, outliers; |
172-195 |
9.60e-03 |
|
Leucine-rich repeats, outliers;
Pssm-ID: 197688 [Multi-domain] Cd Length: 24 Bit Score: 33.48 E-value: 9.60e-03
|
| LRR_TYP |
smart00369 |
Leucine-rich repeats, typical (most populated) subfamily; |
172-195 |
9.60e-03 |
|
Leucine-rich repeats, typical (most populated) subfamily;
Pssm-ID: 197687 [Multi-domain] Cd Length: 24 Bit Score: 33.48 E-value: 9.60e-03
|
|