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Conserved domains on  [gi|30519983|ref|NP_848753|]
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transmembrane protein 108 precursor [Mus musculus]

Protein Classification

TMEM108 domain-containing protein( domain architecture ID 12174462)

TMEM108 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TMEM108 pfam15759
TMEM108 family; This family of proteins is found in eukaryotes. Proteins in this family are ...
 63-574 0e+00

TMEM108 family; This family of proteins is found in eukaryotes. Proteins in this family are typically between 258 and 575 amino acids in length.


:

Pssm-ID: 464851 [Multi-domain]  Cd Length: 511  Bit Score: 713.77  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983    63 VLTLNPTPDGPSSQAAATLETTvSHPEGHPPTDTTSTVMGTAAVPHPESPLPTGSPPAAMTTTPSHSESLPPGDATPTTT 142
Cdd:pfam15759   1 VVTLEPHPDGPSSQATASMQTT-PHPDGHPPTQTLSTILVTAVTPHSEGPLPTGPPPAAMATTESHSEGRPPGEAVPTIL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   143 LPTKPAGTTSRPTVAPRATTRRPPRPPGSSRKGAGGSTRTLTPVPGGHLARKESQRGRNQSSAHLGPKRPLGKIFQIYKG 222
Cdd:pfam15759  80 LTKPTGATSRPTTAPTRSTTRRPPRPPGSSRKGASSSSRPVSPAPSGHLGRKEGQRGRNQSSTHLGQKRPLGKIFQIYKG 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   223 NFTGSAEPDPSALTPRTPLGGYFSSTQPQTVSPATAPRSTSRVPPTTSLVPVKDKPGFIRSNQGSGPILTSPGGEPAATA 302
Cdd:pfam15759 160 NFTGSVEPDPSALTPRTPLWGYSSSPQPQTVSTTTAPPSTSWRPPTNPLVPAEDKPGLSRANQGSGSTFTSQGGELDTTA 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   303 ATGAPASTQPAPVPSQSPHGDVQDSASHSDSWLAVTPDTDRPTSASSGVFTAATGPTQAAFDATVSAPSPGIPQGPSATP 382
Cdd:pfam15759 240 ASGAPISPQPAPVPSQKPHSDNQDGPSHSDSWLTVTPNTNRPLSASSGVFTAIQGPTQAAFDASVSAPSQGIPQGTSTTP 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   383 QAPTRPSGVSESTVSPAEEEAEASPTTTDRGPRPLSTVLSTATGNFLNRLVPAGTWKPGTVANISHVAEGDKPQHRATIC 462
Cdd:pfam15759 320 QAPTNPPGVSESTVSIAEEEATATPNMTDRVPSPLSTVVSTATGNFLNRLVPAGTWKPGTAGNISHVAEGDKPQHRATIC 399

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   463 LSKMDIAWVIVAISVPISSCSVLLTVCCMRRKKKTANPENNLSYWNNAITMDYFNRHAVELPREIQSLETSEDQLSEPRS 542
Cdd:pfam15759 400 LSKMDIVWVILAISVPISSCSVLLTVCCMRRKKKTANPENNLSYWNNAITMDYFNRHAVELPREIQSLETSEDQLSEPRS 479

                         490       500       510
                  ....*....|....*....|....*....|..
gi 30519983   543 PANGDYRDTGMVLVNPFCQETLFVGNDQVSEI 574
Cdd:pfam15759 480 PANGDYRDTGMVLVNPFCQETLFVGNDQVSEI 511
 
Name Accession Description Interval E-value
TMEM108 pfam15759
TMEM108 family; This family of proteins is found in eukaryotes. Proteins in this family are ...
 63-574 0e+00

TMEM108 family; This family of proteins is found in eukaryotes. Proteins in this family are typically between 258 and 575 amino acids in length.


Pssm-ID: 464851 [Multi-domain]  Cd Length: 511  Bit Score: 713.77  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983    63 VLTLNPTPDGPSSQAAATLETTvSHPEGHPPTDTTSTVMGTAAVPHPESPLPTGSPPAAMTTTPSHSESLPPGDATPTTT 142
Cdd:pfam15759   1 VVTLEPHPDGPSSQATASMQTT-PHPDGHPPTQTLSTILVTAVTPHSEGPLPTGPPPAAMATTESHSEGRPPGEAVPTIL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   143 LPTKPAGTTSRPTVAPRATTRRPPRPPGSSRKGAGGSTRTLTPVPGGHLARKESQRGRNQSSAHLGPKRPLGKIFQIYKG 222
Cdd:pfam15759  80 LTKPTGATSRPTTAPTRSTTRRPPRPPGSSRKGASSSSRPVSPAPSGHLGRKEGQRGRNQSSTHLGQKRPLGKIFQIYKG 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   223 NFTGSAEPDPSALTPRTPLGGYFSSTQPQTVSPATAPRSTSRVPPTTSLVPVKDKPGFIRSNQGSGPILTSPGGEPAATA 302
Cdd:pfam15759 160 NFTGSVEPDPSALTPRTPLWGYSSSPQPQTVSTTTAPPSTSWRPPTNPLVPAEDKPGLSRANQGSGSTFTSQGGELDTTA 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   303 ATGAPASTQPAPVPSQSPHGDVQDSASHSDSWLAVTPDTDRPTSASSGVFTAATGPTQAAFDATVSAPSPGIPQGPSATP 382
Cdd:pfam15759 240 ASGAPISPQPAPVPSQKPHSDNQDGPSHSDSWLTVTPNTNRPLSASSGVFTAIQGPTQAAFDASVSAPSQGIPQGTSTTP 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   383 QAPTRPSGVSESTVSPAEEEAEASPTTTDRGPRPLSTVLSTATGNFLNRLVPAGTWKPGTVANISHVAEGDKPQHRATIC 462
Cdd:pfam15759 320 QAPTNPPGVSESTVSIAEEEATATPNMTDRVPSPLSTVVSTATGNFLNRLVPAGTWKPGTAGNISHVAEGDKPQHRATIC 399

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   463 LSKMDIAWVIVAISVPISSCSVLLTVCCMRRKKKTANPENNLSYWNNAITMDYFNRHAVELPREIQSLETSEDQLSEPRS 542
Cdd:pfam15759 400 LSKMDIVWVILAISVPISSCSVLLTVCCMRRKKKTANPENNLSYWNNAITMDYFNRHAVELPREIQSLETSEDQLSEPRS 479

                         490       500       510
                  ....*....|....*....|....*....|..
gi 30519983   543 PANGDYRDTGMVLVNPFCQETLFVGNDQVSEI 574
Cdd:pfam15759 480 PANGDYRDTGMVLVNPFCQETLFVGNDQVSEI 511
PHA03247 PHA03247
large tegument protein UL36; Provisional
 36-416 4.16e-11

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 66.50  E-value: 4.16e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983    36 ESLQTLPSGSPPGTMVTAPHSPTRLSSVLTLNPTPDgPSSQAAatleTTVSHPEGHPPTDTTSTVMGTAAVPHPESPLPT 115
Cdd:PHA03247 2541 EELASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPR-PSEPAV----TSRARRPDAPPQSARPRAPVDDRGDPRGPAPPS 2615

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   116 GSPPAAMT-----TTPSHSESLPPGDATPTTTLPTKPAGTTSRPTVAPRATTRRPPRPPGSSRKGAGGSTRTLTPVPG-- 188
Cdd:PHA03247 2616 PLPPDTHApdpppPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGsl 2695

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   189 GHLARKESQRGRNQSSAH-LGPKRPLGKIFQIYKGNF---TGSAEPDPSALTPRTPLGGYFSSTQPQTVSPA--TAPRST 262
Cdd:PHA03247 2696 TSLADPPPPPPTPEPAPHaLVSATPLPPGPAAARQASpalPAAPAPPAVPAGPATPGGPARPARPPTTAGPPapAPPAAP 2775

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   263 SRVPPTTSLVPVKDKPGFIRSNQGSGPILTSPGGEPAATAATGAPAS---------TQPAPVPSQSPHGDVQDSASHSDS 333
Cdd:PHA03247 2776 AAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAAspagplpppTSAQPTAPPPPPGPPPPSLPLGGS 2855

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   334 WLAVTPDTDRPTSASSGVFTAATG-------PTQAAFDATVSAPSPGIPQGPSATPQAPTRPSGVSESTVSPAEEEAEAS 406
Cdd:PHA03247 2856 VAPGGDVRRRPPSRSPAAKPAAPArppvrrlARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPP 2935

                         410
                  ....*....|
gi 30519983   407 PTTTDRGPRP 416
Cdd:PHA03247 2936 PPRPQPPLAP 2945
 
Name Accession Description Interval E-value
TMEM108 pfam15759
TMEM108 family; This family of proteins is found in eukaryotes. Proteins in this family are ...
 63-574 0e+00

TMEM108 family; This family of proteins is found in eukaryotes. Proteins in this family are typically between 258 and 575 amino acids in length.


Pssm-ID: 464851 [Multi-domain]  Cd Length: 511  Bit Score: 713.77  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983    63 VLTLNPTPDGPSSQAAATLETTvSHPEGHPPTDTTSTVMGTAAVPHPESPLPTGSPPAAMTTTPSHSESLPPGDATPTTT 142
Cdd:pfam15759   1 VVTLEPHPDGPSSQATASMQTT-PHPDGHPPTQTLSTILVTAVTPHSEGPLPTGPPPAAMATTESHSEGRPPGEAVPTIL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   143 LPTKPAGTTSRPTVAPRATTRRPPRPPGSSRKGAGGSTRTLTPVPGGHLARKESQRGRNQSSAHLGPKRPLGKIFQIYKG 222
Cdd:pfam15759  80 LTKPTGATSRPTTAPTRSTTRRPPRPPGSSRKGASSSSRPVSPAPSGHLGRKEGQRGRNQSSTHLGQKRPLGKIFQIYKG 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   223 NFTGSAEPDPSALTPRTPLGGYFSSTQPQTVSPATAPRSTSRVPPTTSLVPVKDKPGFIRSNQGSGPILTSPGGEPAATA 302
Cdd:pfam15759 160 NFTGSVEPDPSALTPRTPLWGYSSSPQPQTVSTTTAPPSTSWRPPTNPLVPAEDKPGLSRANQGSGSTFTSQGGELDTTA 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   303 ATGAPASTQPAPVPSQSPHGDVQDSASHSDSWLAVTPDTDRPTSASSGVFTAATGPTQAAFDATVSAPSPGIPQGPSATP 382
Cdd:pfam15759 240 ASGAPISPQPAPVPSQKPHSDNQDGPSHSDSWLTVTPNTNRPLSASSGVFTAIQGPTQAAFDASVSAPSQGIPQGTSTTP 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   383 QAPTRPSGVSESTVSPAEEEAEASPTTTDRGPRPLSTVLSTATGNFLNRLVPAGTWKPGTVANISHVAEGDKPQHRATIC 462
Cdd:pfam15759 320 QAPTNPPGVSESTVSIAEEEATATPNMTDRVPSPLSTVVSTATGNFLNRLVPAGTWKPGTAGNISHVAEGDKPQHRATIC 399

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   463 LSKMDIAWVIVAISVPISSCSVLLTVCCMRRKKKTANPENNLSYWNNAITMDYFNRHAVELPREIQSLETSEDQLSEPRS 542
Cdd:pfam15759 400 LSKMDIVWVILAISVPISSCSVLLTVCCMRRKKKTANPENNLSYWNNAITMDYFNRHAVELPREIQSLETSEDQLSEPRS 479

                         490       500       510
                  ....*....|....*....|....*....|..
gi 30519983   543 PANGDYRDTGMVLVNPFCQETLFVGNDQVSEI 574
Cdd:pfam15759 480 PANGDYRDTGMVLVNPFCQETLFVGNDQVSEI 511
PHA03247 PHA03247
large tegument protein UL36; Provisional
 36-416 4.16e-11

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 66.50  E-value: 4.16e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983    36 ESLQTLPSGSPPGTMVTAPHSPTRLSSVLTLNPTPDgPSSQAAatleTTVSHPEGHPPTDTTSTVMGTAAVPHPESPLPT 115
Cdd:PHA03247 2541 EELASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPR-PSEPAV----TSRARRPDAPPQSARPRAPVDDRGDPRGPAPPS 2615

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   116 GSPPAAMT-----TTPSHSESLPPGDATPTTTLPTKPAGTTSRPTVAPRATTRRPPRPPGSSRKGAGGSTRTLTPVPG-- 188
Cdd:PHA03247 2616 PLPPDTHApdpppPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGsl 2695

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   189 GHLARKESQRGRNQSSAH-LGPKRPLGKIFQIYKGNF---TGSAEPDPSALTPRTPLGGYFSSTQPQTVSPA--TAPRST 262
Cdd:PHA03247 2696 TSLADPPPPPPTPEPAPHaLVSATPLPPGPAAARQASpalPAAPAPPAVPAGPATPGGPARPARPPTTAGPPapAPPAAP 2775

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   263 SRVPPTTSLVPVKDKPGFIRSNQGSGPILTSPGGEPAATAATGAPAS---------TQPAPVPSQSPHGDVQDSASHSDS 333
Cdd:PHA03247 2776 AAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAAspagplpppTSAQPTAPPPPPGPPPPSLPLGGS 2855

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   334 WLAVTPDTDRPTSASSGVFTAATG-------PTQAAFDATVSAPSPGIPQGPSATPQAPTRPSGVSESTVSPAEEEAEAS 406
Cdd:PHA03247 2856 VAPGGDVRRRPPSRSPAAKPAAPArppvrrlARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPP 2935

                         410
                  ....*....|
gi 30519983   407 PTTTDRGPRP 416
Cdd:PHA03247 2936 PPRPQPPLAP 2945
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 31-399 4.51e-10

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 62.88  E-value: 4.51e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983    31 EPSPRESLQTLPSGSPPGTMVTAPHSPTRLSSVLTLNPTPDGPSSQAAATLETTVSHPEGHPPTDttSTVMGTAAVPHPE 110
Cdd:PHA03307   74 GPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEML--RPVGSPGPPPAAS 151

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   111 SPLPTGSPPAAMTTTPSHSESLPPGDATPTTTLPTKPAGTTSRPTVAPRATTRRPPRPPGSSRKGAGGSTrtltPVPGgh 190
Cdd:PHA03307  152 PPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPA----PAPG-- 225

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   191 larKESQRGRNQSSAHLGPKRPLGKIFQIYKGNFTGSAEPDPSALTPRTPLGGYFSSTQPQTVSPATAPRSTSRVP-PTT 269
Cdd:PHA03307  226 ---RSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPsPSS 302

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   270 SLVPVKDKPGFIRSNQGSGPILTSPGGEPAATAATGAPASTQPAPVPSQSPhgdvqdsaSHSDSWLAVTPDTDRPTSASS 349
Cdd:PHA03307  303 PGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSP--------SRPPPPADPSSPRKRPRPSRA 374

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|.
gi 30519983   350 GVFTAATGPTQAAFDATVSAPSPGIPQ-GPSATPQAPTRPSGVSESTVSPA 399
Cdd:PHA03307  375 PSSPAASAGRPTRRRARAAVAGRARRRdATGRFPAGRPRPSPLDAGAASGA 425
PHA03247 PHA03247
large tegument protein UL36; Provisional
 42-418 1.00e-08

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 58.41  E-value: 1.00e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983    42 PSGSPPGTMVTAPHSPTRLSSVLTLNPTPDGPSSQAAATLETTVSHPEGHPPTDTTSTVMGTAAVPHPESPLPTGSPPAA 121
Cdd:PHA03247 2708 PEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPA 2787

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   122 MTTTPSHSESLPPGDATPTTTLPTKPAGTTSRPTVAPRATTRRPPRP-PGSSRKGAGGSTRTLTP----VPGGHLARKES 196
Cdd:PHA03247 2788 VASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAqPTAPPPPPGPPPPSLPLggsvAPGGDVRRRPP 2867

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   197 QRGRNQSSAhLGPKRPLGKIFQIYKGNFTGS-AEPDPSALTPRTPLGGYFSSTQPQ-------TVSPATAPRSTSRVPPT 268
Cdd:PHA03247 2868 SRSPAAKPA-APARPPVRRLARPAVSRSTESfALPPDQPERPPQPQAPPPPQPQPQpppppqpQPPPPPPPRPQPPLAPT 2946

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   269 TSLVPVKDKPGFIRSNQGSGPIltsPGGEPAATAATGAPASTQPAPVPSQSPHGDVQDSASHS-DSWLAVTPDTD-RPTS 346
Cdd:PHA03247 2947 TDPAGAGEPSGAVPQPWLGALV---PGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSRVSSwASSLALHEETDpPPVS 3023

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 30519983   347 ASSGVFTAATGPTQAAFDATVSAPSPGIPQGPSATPQAPTRPSgVSESTVSPAEEEAEASPtTTDRGPRPLS 418
Cdd:PHA03247 3024 LKQTLWPPDDTEDSDADSLFDSDSERSDLEALDPLPPEPHDPF-AHEPDPATPEAGARESP-SSQFGPPPLS 3093
PHA03247 PHA03247
large tegument protein UL36; Provisional
 31-434 2.25e-08

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 57.64  E-value: 2.25e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983    31 EPSPReslqtlPSGSPPGTMVTAPHSPTRLSSVLTLNPTPDGPSSQAAATLETTVSHPEGHPPTD-----TTSTVMGTAA 105
Cdd:PHA03247 2572 RPAPR------PSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSpspaaNEPDPHPPPT 2645

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   106 VPHPESPLPTGSPPAAMTTTPSHSESLPPGDATPTTTLPTKPAgttsRPTVAPRATTRRPPRPPGSSRKGAGGSTRTLTP 185
Cdd:PHA03247 2646 VPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAA----RPTVGSLTSLADPPPPPPTPEPAPHALVSATPL 2721

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   186 VPGGHLARKESQRGRNQSSAHLGPKRPLGKIFQIYKGNFTGSAEPdPSALTPRTPLGGYFSSTQPQTVSPATAPRSTSRV 265
Cdd:PHA03247 2722 PPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGP-PAPAPPAAPAAGPPRRLTRPAVASLSESRESLPS 2800

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   266 PPTTSLVPVKDKPGFIRSNQGSGPILTSPGGEPAATAATGAPASTQPAPVP---SQSPHGDVQDSA-SHSDSWLAVTPDT 341
Cdd:PHA03247 2801 PWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPlggSVAPGGDVRRRPpSRSPAAKPAAPAR 2880

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   342 DRPTSASSGVFTAATGPTQAAFDATVSAPSPGIPQGPSATPQAPTRPSGVSESTvSPAEEEAEASPTTtdrGPRPLSTVL 421
Cdd:PHA03247 2881 PPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPP-PPPRPQPPLAPTT---DPAGAGEPS 2956

                         410
                  ....*....|...
gi 30519983   422 STATGNFLNRLVP 434
Cdd:PHA03247 2957 GAVPQPWLGALVP 2969
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 33-406 9.56e-07

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 52.10  E-value: 9.56e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983    33 SPRESLQTLPSGSPpGTMVTAPHSPTRLSSVLTLNPTPDGPSSQAAATLETTVSH-PEGHPPTDTTSTVMGTAAVPHPES 111
Cdd:PHA03307   27 TPGDAADDLLSGSQ-GQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPaNESRSTPTWSLSTLAPASPAREGS 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   112 PLPTGSPPAAMTTTPSHSESLPP-------GDATPTTTLPTKPAGTTSRPTVAPRATTRRPPRPPGSSRKGAGGSTRTLT 184
Cdd:PHA03307  106 PTPPGPSSPDPPPPTPPPASPPPspapdlsEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARA 185

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   185 PVPGGHlarkeSQRGRNQSSAHLGPKRPLGKIFQIYkgnfTGSAEPDPSALTPRTPLGGYFSSTQPQTVSPATAPRSTSR 264
Cdd:PHA03307  186 PSSPPA-----EPPPSTPPAAASPRPPRRSSPISAS----ASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECP 256

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   265 VP-PTTSLVPVKDKPGFIRSNQGSGPILTSPGGepaataatgAPASTQPAPVPSQSPHGDVQDSASHSDSWLAVTPD-TD 342
Cdd:PHA03307  257 LPrPAPITLPTRIWEASGWNGPSSRPGPASSSS---------SPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESsSS 327

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30519983   343 RPTSASSGVFTAATGPTQAAFDATVSAPSPGiPQGPSATPQAPTRPSGVSESTVSPAEEEAEAS 406
Cdd:PHA03307  328 STSSSSESSRGAAVSPGPSPSRSPSPSRPPP-PADPSSPRKRPRPSRAPSSPAASAGRPTRRRA 390
PHA03247 PHA03247
large tegument protein UL36; Provisional
 32-425 1.43e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 48.40  E-value: 1.43e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983    32 PSPRESLQTLPSGSPPGTMVTAPHSPTRLSsvLTLNPTPDGPSSQAAATLETtvSHPEGHPPTDTTSTvmgTAAVPHPES 111
Cdd:PHA03247 2633 PAANEPDPHPPPTVPPPERPRDDPAPGRVS--RPRRARRLGRAAQASSPPQR--PRRRAARPTVGSLT---SLADPPPPP 2705

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   112 PLPTGSPPAAMTTTPshsesLPPGDATPTTTLPTKPAGTTSRPT----VAPRATTR--RPPRP-----PGSSRKGAGGST 180
Cdd:PHA03247 2706 PTPEPAPHALVSATP-----LPPGPAAARQASPALPAAPAPPAVpagpATPGGPARpaRPPTTagppaPAPPAAPAAGPP 2780

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   181 RTLTPVPGGHLArkesqRGRNQSSAHLGPKRPLGKIfqiykgnfTGSAEPDPSALTPRTPLggyfssTQPQTVSPATAPR 260
Cdd:PHA03247 2781 RRLTRPAVASLS-----ESRESLPSPWDPADPPAAV--------LAPAAALPPAASPAGPL------PPPTSAQPTAPPP 2841

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   261 STSRVPPTTSLVPVKDKPGFIRSNQGSGPILTSPGGEPAAT----AATGAPASTQPAPVPSQSPHGDVQDSASHSDSWLA 336
Cdd:PHA03247 2842 PPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPvrrlARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQP 2921

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   337 VTPDTDRPTSASSGVFTAATGPTQAAFDATVSAPSPGIPQgPSATPQAPTRPSGVSESTVSPAEEEAEASPTTTDRGPRP 416
Cdd:PHA03247 2922 QPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQ-PWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHS 3000


                  ....*....
gi 30519983   417 LSTVLSTAT 425
Cdd:PHA03247 3001 LSRVSSWAS 3009
PHA03247 PHA03247
large tegument protein UL36; Provisional
 42-444 2.42e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.16  E-value: 2.42e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983    42 PSGSPPGTmVTAPHSPTRLSSVLTLNPTPDGPSSQAAAT----LETTVSHPEGHPPTDTTSTVMGTAAVPHPESPLPTGS 117
Cdd:PHA03247 2498 PGGGGPPD-PDAPPAPSRLAPAILPDEPVGEPVHPRMLTwirgLEELASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPR 2576

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   118 PPAAMTTTPSHSESLPPGDATPTTTLPTK-PAGTTSRPTVAPRATTRRPPRPPGssrkgagGSTRTLTPVPGGHLARKES 196
Cdd:PHA03247 2577 PSEPAVTSRARRPDAPPQSARPRAPVDDRgDPRGPAPPSPLPPDTHAPDPPPPS-------PSPAANEPDPHPPPTVPPP 2649

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   197 QRGRNQSSAhlGPKRPLGKIFQIYKGNFTGSAEPDPSALTPRTPLGGYFSSTQPqtvsPATAPRSTSRVPPTTSLVPVKD 276
Cdd:PHA03247 2650 ERPRDDPAP--GRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADP----PPPPPTPEPAPHALVSATPLPP 2723

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   277 KPGFIRSNQGSGPIltspggepaataatgapastqpAPVPSQSPHGdvqdsashsdswlAVTPDTDRPTSASSgvftaat 356
Cdd:PHA03247 2724 GPAAARQASPALPA----------------------APAPPAVPAG-------------PATPGGPARPARPP------- 2761

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   357 gptqaafdATVSAPSPGIPQGPSATPQAPTRPSGVSestvsPAEEEAEASPTTTDRGPRPLSTVLSTATGNFLNRlvPAG 436
Cdd:PHA03247 2762 --------TTAGPPAPAPPAAPAAGPPRRLTRPAVA-----SLSESRESLPSPWDPADPPAAVLAPAAALPPAAS--PAG 2826


                  ....*...
gi 30519983   437 TWKPGTVA 444
Cdd:PHA03247 2827 PLPPPTSA 2834
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 68-413 2.60e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 43.82  E-value: 2.60e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983   68 PTPDGPSSQAAATletTVSHPEGHPPTDTTSTVMGTAAVPHPESPLPTGSPPAAMTTT---------PSHSESLPPGDAT 138
Cdd:PRK07764 394 PAAAAPSAAAAAP---AAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNApaggapsppPAAAPSAQPAPAP 470

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983  139 PTTTLPTKPAGTTSRPTVAPRATTRRPPRPPGSSRKGAGGSTR-------------------------TLTPVPGGHL-- 191
Cdd:PRK07764 471 AAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRerwpeilaavpkrsrktwaillpeaTVLGVRGDTLvl 550

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983  192 ------ARKESQRGRNQSSAHLGPKRPLGKIFQIYKGNFTGSAEPDPSALTPRTPLGGYFSSTQPQTVSPATAPR----- 260
Cdd:PRK07764 551 gfstggLARRFASPGNAEVLVTALAEELGGDWQVEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAapapa 630

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983  261 ---STSRVPPTTSLVPVKDKPGFIRSNQGSGPILTSPGGEPAATAATGAPASTQPAPVPSQSPHGDVQDSASHSDSWLAV 337
Cdd:PRK07764 631 gaaAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPP 710

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983  338 TPDTDRPTSASSGVFTAATGPTQAAFDATVSAPSPGIPQGPS-------ATPQAPTRPSGVSESTVSPAEE------EAE 404
Cdd:PRK07764 711 AGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAgapaqppPPPAPAPAAAPAAAPPPSPPSEeeemaeDDA 790


                 ....*....
gi 30519983  405 ASPTTTDRG 413
Cdd:PRK07764 791 PSMDDEDRR 799
PRK10856 PRK10856
cytoskeleton protein RodZ;
328-425 2.27e-03

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 40.39  E-value: 2.27e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983  328 ASHSDSWLAVTPDTDRPTSASSGVfTAATGPTQAAFDATVSAPSPGIPQGPSATPQAPTRPSGVSESTVSPAEEEAEASP 407
Cdd:PRK10856 147 ADQSSAELSQNSGQSVPLDTSTTT-DPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAP 225

                         90
                 ....*....|....*...
gi 30519983  408 TTTdrGPRPLSTVLSTAT 425
Cdd:PRK10856 226 AAP--ATPDGAAPLPTDQ 241
PRK10118 PRK10118
flagellar hook length control protein FliK;
310-420 2.92e-03

flagellar hook length control protein FliK;


Pssm-ID: 236652 [Multi-domain]  Cd Length: 408  Bit Score: 40.23  E-value: 2.92e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30519983  310 TQPAPVPSQSPHGDVQDSASHSDSWLAVTPDTDRPTSASSGvfTAATGPTQAAFDATVSAPSPGIPQGPSATPQAPTRPS 389
Cdd:PRK10118 153 QDNTTPVADAPSTVLPAEKPTLLTKDMPSAPQDETHTLSSD--EHEKGLTSAQLTTAQPDDAPGTPAQPLTPLAAEAQAK 230

                         90       100       110
                 ....*....|....*....|....*....|.
gi 30519983  390 GVSESTVSPAeeEAEASPTTTDRGPRPLSTV 420
Cdd:PRK10118 231 AEVISTPSPV--TAAASPTITPHQTQPLPTA 259
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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