NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|39930561|ref|NP_919328|]
View 

uncharacterized protein LOC278676 [Mus musculus]

Protein Classification

Takusan domain-containing protein( domain architecture ID 10521746)

Takusan domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
Takusan pfam04822
Takusan; This domain is named takusan, which is a Japanese word meaning 'many'. Members of ...
 91-170 3.15e-24

Takusan; This domain is named takusan, which is a Japanese word meaning 'many'. Members of this family regulate synaptic activity.


:

Pssm-ID: 461445  Cd Length: 85  Bit Score: 95.79  E-value: 3.15e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39930561    91 KTSSQNCNITNHMKNVNKVEDMKLYIRKINAEREELCRILDTDMNTDLNY----RMNIEFTIIKSQDEKTMSDMEKMTQS 166
Cdd:pfam04822   1 RASSSPPTILSKEQRKKELERLKFELQLITNERNELRDILALYTEGDLNDrpyhRLNPEYEILKLQHEKVMSDLQKLENE 80


                  ....
gi 39930561   167 ISDT 170
Cdd:pfam04822  81 ISEA 84
 
Name Accession Description Interval E-value
Takusan pfam04822
Takusan; This domain is named takusan, which is a Japanese word meaning 'many'. Members of ...
 91-170 3.15e-24

Takusan; This domain is named takusan, which is a Japanese word meaning 'many'. Members of this family regulate synaptic activity.


Pssm-ID: 461445  Cd Length: 85  Bit Score: 95.79  E-value: 3.15e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39930561    91 KTSSQNCNITNHMKNVNKVEDMKLYIRKINAEREELCRILDTDMNTDLNY----RMNIEFTIIKSQDEKTMSDMEKMTQS 166
Cdd:pfam04822   1 RASSSPPTILSKEQRKKELERLKFELQLITNERNELRDILALYTEGDLNDrpyhRLNPEYEILKLQHEKVMSDLQKLENE 80


                  ....
gi 39930561   167 ISDT 170
Cdd:pfam04822  81 ISEA 84
 
Name Accession Description Interval E-value
Takusan pfam04822
Takusan; This domain is named takusan, which is a Japanese word meaning 'many'. Members of ...
 91-170 3.15e-24

Takusan; This domain is named takusan, which is a Japanese word meaning 'many'. Members of this family regulate synaptic activity.


Pssm-ID: 461445  Cd Length: 85  Bit Score: 95.79  E-value: 3.15e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39930561    91 KTSSQNCNITNHMKNVNKVEDMKLYIRKINAEREELCRILDTDMNTDLNY----RMNIEFTIIKSQDEKTMSDMEKMTQS 166
Cdd:pfam04822   1 RASSSPPTILSKEQRKKELERLKFELQLITNERNELRDILALYTEGDLNDrpyhRLNPEYEILKLQHEKVMSDLQKLENE 80


                  ....
gi 39930561   167 ISDT 170
Cdd:pfam04822  81 ISEA 84
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH