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Conserved domains on  [gi|530408193|ref|XP_005255407|]
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bifunctional apoptosis regulator isoform X1 [Homo sapiens]

Protein Classification

SAM_BAR domain-containing protein( domain architecture ID 10175732)

SAM_BAR domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
SAM_BAR cd09513
SAM domain of BAR subfamily; SAM (sterile alpha motif) domain of BAR (Bifunctional Apoptosis ...
51-121 1.39e-38

SAM domain of BAR subfamily; SAM (sterile alpha motif) domain of BAR (Bifunctional Apoptosis Regulator) subfamily is a protein-protein interaction domain. In addition to the SAM domain, this type of regulator has a RING finger domain. Proteins of this subfamily are involved in the apoptosis signal network. Their overexpression in human neuronal cells significantly protects cells from a broad range of cell death stimuli. SAM domain can interact with Caspase8, Bcl-2 and Bcl-X resulting in suppression of Bax-induced cell death.


:

Pssm-ID: 188912  Cd Length: 71  Bit Score: 131.08  E-value: 1.39e-38
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 530408193  51 VAKWTAEEVVLWLEQLGPWASLYRERFLSERVNGRLLLTLTEEEFSKTPYTIENSSHRRAILMELERVKAL 121
Cdd:cd09513    1 VSKWTPEEVVLWLEQLGPWASLYRERFLSENVNGRLLLTLTEEELSKPPFNIENSLHRRAILTELERVKTL 71
 
Name Accession Description Interval E-value
SAM_BAR cd09513
SAM domain of BAR subfamily; SAM (sterile alpha motif) domain of BAR (Bifunctional Apoptosis ...
51-121 1.39e-38

SAM domain of BAR subfamily; SAM (sterile alpha motif) domain of BAR (Bifunctional Apoptosis Regulator) subfamily is a protein-protein interaction domain. In addition to the SAM domain, this type of regulator has a RING finger domain. Proteins of this subfamily are involved in the apoptosis signal network. Their overexpression in human neuronal cells significantly protects cells from a broad range of cell death stimuli. SAM domain can interact with Caspase8, Bcl-2 and Bcl-X resulting in suppression of Bax-induced cell death.


Pssm-ID: 188912  Cd Length: 71  Bit Score: 131.08  E-value: 1.39e-38
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 530408193  51 VAKWTAEEVVLWLEQLGPWASLYRERFLSERVNGRLLLTLTEEEFSKTPYTIENSSHRRAILMELERVKAL 121
Cdd:cd09513    1 VSKWTPEEVVLWLEQLGPWASLYRERFLSENVNGRLLLTLTEEELSKPPFNIENSLHRRAILTELERVKTL 71
SAM_1 pfam00536
SAM domain (Sterile alpha motif); It has been suggested that SAM is an evolutionarily ...
53-119 7.52e-07

SAM domain (Sterile alpha motif); It has been suggested that SAM is an evolutionarily conserved protein binding domain that is involved in the regulation of numerous developmental processes in diverse eukaryotes. The SAM domain can potentially function as a protein interaction module through its ability to homo- and heterooligomerise with other SAM domains.


Pssm-ID: 425739  Cd Length: 64  Bit Score: 45.72  E-value: 7.52e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 530408193   53 KWTAEEVVLWLEQLGPwaSLYRERFLSERVNGRLLLTLTEEEFSKtpYTIENSSHRRAILMELERVK 119
Cdd:pfam00536   2 GWSVEDVGEWLESIGL--GQYIDSFRAGYIDGDALLQLTEDDLLK--LGVTLLGHRKKILYAIQRLK 64
SAM smart00454
Sterile alpha motif; Widespread domain in signalling and nuclear proteins. In EPH-related ...
51-94 1.24e-04

Sterile alpha motif; Widespread domain in signalling and nuclear proteins. In EPH-related tyrosine kinases, appears to mediate cell-cell initiated signal transduction via the binding of SH2-containing proteins to a conserved tyrosine that is phosphorylated. In many cases mediates homodimerisation.


Pssm-ID: 197735  Cd Length: 68  Bit Score: 39.59  E-value: 1.24e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 530408193    51 VAKWTAEEVVLWLEQLGPwaSLYRERFLSERVNGRLLLTLTEEE 94
Cdd:smart00454   1 VSQWSPESVADWLESIGL--EQYADNFRKNGIDGALLLLLTSEE 42
 
Name Accession Description Interval E-value
SAM_BAR cd09513
SAM domain of BAR subfamily; SAM (sterile alpha motif) domain of BAR (Bifunctional Apoptosis ...
51-121 1.39e-38

SAM domain of BAR subfamily; SAM (sterile alpha motif) domain of BAR (Bifunctional Apoptosis Regulator) subfamily is a protein-protein interaction domain. In addition to the SAM domain, this type of regulator has a RING finger domain. Proteins of this subfamily are involved in the apoptosis signal network. Their overexpression in human neuronal cells significantly protects cells from a broad range of cell death stimuli. SAM domain can interact with Caspase8, Bcl-2 and Bcl-X resulting in suppression of Bax-induced cell death.


Pssm-ID: 188912  Cd Length: 71  Bit Score: 131.08  E-value: 1.39e-38
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 530408193  51 VAKWTAEEVVLWLEQLGPWASLYRERFLSERVNGRLLLTLTEEEFSKTPYTIENSSHRRAILMELERVKAL 121
Cdd:cd09513    1 VSKWTPEEVVLWLEQLGPWASLYRERFLSENVNGRLLLTLTEEELSKPPFNIENSLHRRAILTELERVKTL 71
SAM_SARM1-like_repeat1 cd09501
SAM domain ot SARM1-like proteins, repeat 1; SAM (sterile alpha motif) domain repeat 1 of ...
51-120 6.98e-08

SAM domain ot SARM1-like proteins, repeat 1; SAM (sterile alpha motif) domain repeat 1 of SARM1-like adaptor proteins is a protein-protein interaction domain. SARM1-like proteins contain two tandem SAM domains. SARM1-like proteins are involved in TLR (Toll-like receptor) signaling. They are responsible for targeted localization of the whole protein to post-synaptic regions of axons. In humans SARM1 expression is detected in kidney and liver.


Pssm-ID: 188900 [Multi-domain]  Cd Length: 69  Bit Score: 48.84  E-value: 6.98e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530408193  51 VAKWTAEEVVLWLEQLGpwASLYRERFLSERVNGRLLLTLTEEEFsKTPYTIENSSHRRAILMELERVKA 120
Cdd:cd09501    1 VPLWSVADVQTWLKQIG--FEDYAEKFSESQVDGDLLLQLTEDEL-KQDLGMSSGLLRKRFLRELVELKT 67
SAM_1 pfam00536
SAM domain (Sterile alpha motif); It has been suggested that SAM is an evolutionarily ...
53-119 7.52e-07

SAM domain (Sterile alpha motif); It has been suggested that SAM is an evolutionarily conserved protein binding domain that is involved in the regulation of numerous developmental processes in diverse eukaryotes. The SAM domain can potentially function as a protein interaction module through its ability to homo- and heterooligomerise with other SAM domains.


Pssm-ID: 425739  Cd Length: 64  Bit Score: 45.72  E-value: 7.52e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 530408193   53 KWTAEEVVLWLEQLGPwaSLYRERFLSERVNGRLLLTLTEEEFSKtpYTIENSSHRRAILMELERVK 119
Cdd:pfam00536   2 GWSVEDVGEWLESIGL--GQYIDSFRAGYIDGDALLQLTEDDLLK--LGVTLLGHRKKILYAIQRLK 64
SAM_superfamily cd09487
SAM (Sterile alpha motif ); SAM (Sterile Alpha Motif) domain is a module consisting of ...
58-117 1.30e-06

SAM (Sterile alpha motif ); SAM (Sterile Alpha Motif) domain is a module consisting of approximately 70 amino acids. This domain is found in the Fungi/Metazoa group and in a restricted number of bacteria. Proteins with SAM domains are represented by a wide variety of domain architectures and have different intracellular localization, including nucleus, cytoplasm and membranes. SAM domains have diverse functions. They can interact with proteins, RNAs and membrane lipids, contain site of phosphorylation and/or kinase docking site, and play a role in protein homo and hetero dimerization/oligomerization in processes ranging from signal transduction to regulation of transcription. Mutations in SAM domains have been linked to several diseases.


Pssm-ID: 188886 [Multi-domain]  Cd Length: 56  Bit Score: 44.92  E-value: 1.30e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 530408193  58 EVVLWLEQLGPwaSLYRERFLSERVNGRLLLTLTEEEFSKTPytIENSSHRRAILMELER 117
Cdd:cd09487    1 DVAEWLESLGL--EQYADLFRKNEIDGDALLLLTDEDLKELG--ITSPGHRKKILRAIQR 56
SAM_Shank1,2,3 cd09506
SAM domain of Shank1,2,3 family proteins; SAM (sterile alpha motif) domain of Shank1,2,3 ...
51-96 2.92e-05

SAM domain of Shank1,2,3 family proteins; SAM (sterile alpha motif) domain of Shank1,2,3 family proteins is a protein-protein interaction domain. Shank1,2,3 proteins are scaffold proteins that are known to interact with a variety of cytoplasmic and membrane proteins. SAM domains of the Shank1,2,3 family are prone to homooligomerization. They are highly enriched in the postsynaptic density, acting as scaffolds to organize assembly of postsynaptic proteins. SAM domains of Shank3 proteins can form large sheets of helical fibers. Shank genes show distinct patterns of expression, in rat Shank1 mRNA is found almost exclusively in brain, Shank2 in brain, kidney and liver, and Shank3 in heart, brain and spleen.


Pssm-ID: 188905  Cd Length: 66  Bit Score: 41.15  E-value: 2.92e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 530408193  51 VAKWTAEEVVLWLEQLGpwASLYRERFLSERVNGRLLLTLTEEEFS 96
Cdd:cd09506    2 VHEWTVDDVGDWLESLN--LGEHRERFMDNEIDGSHLPNLDKEDLT 45
SAM_aveugle-like cd09510
SAM domain of aveugle-like subfamily; SAM (sterile alpha motif) domain of SAM_aveugle-like ...
49-119 6.64e-05

SAM domain of aveugle-like subfamily; SAM (sterile alpha motif) domain of SAM_aveugle-like subfamily is a protein-protein interaction domain. In Drosophila, the aveugle (AVE) protein (also known as HYP (Hyphen)) is involved in normal photoreceptor differentiation, and required for epidermal growth factor receptor (EGFR) signaling between ras and raf genes during eye development and wing vein formation. SAM domain of the HYP(AVE) protein interacts with SAM domain of CNK, the multidomain scaffold protein connector enhancer of kinase suppressor of ras. CNK/HYP(AVE) complex interacts with KSR (kinase suppressor of Ras) protein. This interaction leads to stimulation of Ras-dependent Raf activation. This subfamily also includes vertebrate AVE homologs - Samd10 and Samd12 proteins. Their exact function is unknown, but they may play a role in signal transduction during embryogenesis.


Pssm-ID: 188909  Cd Length: 75  Bit Score: 40.75  E-value: 6.64e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 530408193  49 KAVAKWTAEEVVLWLEQLGP-WASLYRERFLSERVNGRLLLTLTEEEFSKTpyTIENSSHRRAILMELERVK 119
Cdd:cd09510    1 KPVYLWSVQDVCKWLKRHCPdYYLLYAELFLQHDITGRALLRLNDNKLERM--GITDEDHRQDILREILKLR 70
SAM smart00454
Sterile alpha motif; Widespread domain in signalling and nuclear proteins. In EPH-related ...
51-94 1.24e-04

Sterile alpha motif; Widespread domain in signalling and nuclear proteins. In EPH-related tyrosine kinases, appears to mediate cell-cell initiated signal transduction via the binding of SH2-containing proteins to a conserved tyrosine that is phosphorylated. In many cases mediates homodimerisation.


Pssm-ID: 197735  Cd Length: 68  Bit Score: 39.59  E-value: 1.24e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 530408193    51 VAKWTAEEVVLWLEQLGPwaSLYRERFLSERVNGRLLLTLTEEE 94
Cdd:smart00454   1 VSQWSPESVADWLESIGL--EQYADNFRKNGIDGALLLLLTSEE 42
SAM_SGMS1 cd09514
SAM domain of sphingomyelin synthase; SAM (sterile alpha motif) domain of SGMS-1 ...
49-119 3.90e-04

SAM domain of sphingomyelin synthase; SAM (sterile alpha motif) domain of SGMS-1 (sphingomyelin synthase) subfamily is a potential protein-protein interaction domain. Sphingomyelin synthase 1 is a transmembrane protein with a SAM domain at the N-terminus and a catalytic domain at the C-terminus. Sphingomyelin synthase 1 is a Golgi-associated enzyme, and depending on the concentration of diacylglycerol and ceramide, can catalyze synthesis phosphocholine or sphingomyelin, respectively. It plays a central role in sphingolipid and glycerophospholipid metabolism.


Pssm-ID: 188913  Cd Length: 72  Bit Score: 38.23  E-value: 3.90e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 530408193  49 KAVAKWTAEEVVLWLEQLGpwASLYRERFlsERVNGRLLLTLTEEEFSKTPYTIENSSHRRAILMELERVK 119
Cdd:cd09514    2 KEVVQWSPKEVSDWLSEEG--MQEYSEAL--RSFDGQALLNLTEEDFKKTPLSLVSSDSGRQLLEMIETLK 68
SAM_MLTK cd09529
SAM domain of MLTK subfamily; SAM (sterile alpha motif) domain of MLTK subfamily is a ...
54-119 4.83e-04

SAM domain of MLTK subfamily; SAM (sterile alpha motif) domain of MLTK subfamily is a protein-protein interaction domain. Besides SAM domain, these proteins have N-terminal protein tyrosine kinase domain and leucine-zipper motif. Proteins of this group act as mitogen-activated protein triple kinase in a number of MAPK cascades. They can be activated by autophosphorylation in response to stress signals. MLTK-alpha is known to phosphorylate histone H3. In mammals, MLTKs participate in the activation of the JNK/SAPK, p38, ERK5 pathways, the transcriptional factor NF-kB, in the regulation of the cell cycle checkpoint, and in the induction of apoptosis in a hepatoma cell line. Some members of this subfamily are proto-oncogenes, thus MLTK-alpha is involved in neoplasmic cell transformation and/or skin cancer development in athymic nude mice. Based on in vivo coprecipitation experiments in mammalian cells, it has been demonstrated that MLTK proteins might form homodimers/oligomers via their SAM domains.


Pssm-ID: 188928  Cd Length: 71  Bit Score: 38.26  E-value: 4.83e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 530408193  54 WTAEEVVLWLEQLGPWA------SLYRERFLSERVNGRLLLTLTEEEFSKTpyTIENSSHRRAILMELERVK 119
Cdd:cd09529    2 WTEEDVHFWMQQLVRKGghpselSQYADLFKENHITGKRLLLLTEEDLRDM--GIGSKGHIIHLKSAIEKLT 71
SAM_DGK-delta-eta cd09507
SAM domain of diacylglycerol kinase delta and eta subunits; SAM (sterile alpha motif) domain ...
50-90 9.10e-04

SAM domain of diacylglycerol kinase delta and eta subunits; SAM (sterile alpha motif) domain of DGK-eta-delta subfamily proteins is a protein-protein interaction domain. Proteins of this subfamily are multidomain diacylglycerol kinases with a SAM domain located at the C-terminus. DGK proteins participate in signal transduction. They regulate the level of second messengers such as diacylglycerol and phosphatidic acid. The SAM domain of DGK proteins can form high molecular weight homooligomers through head-to-tail interactions as well as heterooligomers between the SAM domains of DGK delta and eta proteins. The oligomerization plays a role in the regulation of DGK intracellular localization.


Pssm-ID: 188906  Cd Length: 65  Bit Score: 37.01  E-value: 9.10e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 530408193  50 AVAKWTAEEVVLWLEQLGpwASLYRERFLSERVNGRLLLTL 90
Cdd:cd09507    1 PVTNWTTEEVGAWLESLQ--LGEYRDIFARNDIRGSELLHL 39
SAM_SGMS1-like cd09515
SAM domain of sphingomyelin synthase related subfamily; SAM (sterile alpha motif) domain of ...
51-99 9.22e-04

SAM domain of sphingomyelin synthase related subfamily; SAM (sterile alpha motif) domain of SGMS-like (sphingomyelin synthase) subfamily is a potential protein-protein interaction domain. This group of proteins is related to sphingomyelin synthase 1, and contains an N-terminal SAM domain. The function of SGMS1-like proteins is unknown; they may play a role in sphingolipid metabolism.


Pssm-ID: 188914  Cd Length: 70  Bit Score: 37.23  E-value: 9.22e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 530408193  51 VAKWTAEEVVLWLEQLGpWASLYRERFLSERVNGRLLLTLTEEEFSKTP 99
Cdd:cd09515    1 VHEWTCEDVAKWLKKEG-FSKYVDLLCNKHRIDGKVLLSLTEEDLRSPP 48
SAM_2 pfam07647
SAM domain (Sterile alpha motif);
54-119 2.72e-03

SAM domain (Sterile alpha motif);


Pssm-ID: 429573  Cd Length: 66  Bit Score: 35.71  E-value: 2.72e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 530408193   54 WTAEEVVLWLEQLGpwasL--YRERFLSERVNG-RLLLTLTEEEFSKTPytIENSSHRRAILMELERVK 119
Cdd:pfam07647   4 WSLESVADWLRSIG----LeqYTDNFRDQGITGaELLLRLTLEDLKRLG--ITSVGHRRKILKKIQELK 66
SAM_CNK1,2,3-suppressor cd09511
SAM domain of CNK1,2,3-suppressor subfamily; SAM (sterile alpha motif) domain of CNK ...
51-94 3.05e-03

SAM domain of CNK1,2,3-suppressor subfamily; SAM (sterile alpha motif) domain of CNK (connector enhancer of kinase suppressor of ras (Ksr)) subfamily is a protein-protein interaction domain. CNK proteins are multidomain scaffold proteins containing a few protein-protein interaction domains and are required for connecting Rho and Ras signaling pathways. In Drosophila, the SAM domain of CNK is known to interact with the SAM domain of the aveugle protein, forming a heterodimer. Mutation of the SAM domain in human CNK1 abolishes the ability to cooperate with the Ras effector, supporting the idea that this interaction is necessary for proper Ras signal transduction.


Pssm-ID: 188910  Cd Length: 69  Bit Score: 35.73  E-value: 3.05e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 530408193  51 VAKWTAEEVVLWLEQLGPWASLYRERFLSERVNGRLLLTLTEEE 94
Cdd:cd09511    1 VAKWSPKQVTDWLKGLDDCLQQYIYTFEREKVTGEQLLNLSPQD 44
SAM_WDSUB1 cd09505
SAM domain of WDSUB1 proteins; SAM (sterile alpha motif) domain of WDSUB1 subfamily proteins ...
54-119 4.81e-03

SAM domain of WDSUB1 proteins; SAM (sterile alpha motif) domain of WDSUB1 subfamily proteins is a putative protein-protein interaction domain. Proteins of this group contain multiple domains: SAM, one or more WD40 repeats and U-box (derived version of the RING-finger domain). Apparently the WDSUB1 subfamily proteins participate in protein degradation through ubiquitination, since U-box domain are known as a member of E3 ubiquitin ligase family, while SAM and WD40 domains most probably are responsible for an E2 ubiquitin-conjugating enzyme binding and a target protein binding.


Pssm-ID: 188904  Cd Length: 72  Bit Score: 35.37  E-value: 4.81e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 530408193  54 WTAEEVVLWLEQLGpwASLYRERFLSERVNGRLLLTLTEEEFSKTpYTIENSSHRRAILMELERVK 119
Cdd:cd09505    5 WSEEDVCTWLRSIG--LEQYVEVFRANNIDGKELLNLTKESLSKD-LKIESLGHRNKILRKIEELK 67
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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