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Conserved domains on  [gi|530411953|ref|XP_005257293|]
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meiosis-specific coiled-coil domain-containing protein MEIOC isoform X1 [Homo sapiens]

Protein Classification

MEIOC domain-containing protein( domain architecture ID 10633554)

MEIOC domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MEIOC pfam15189
Meiosis-specific coiled-coil domain-containing protein MEIOC; This family of proteins is found ...
747-912 2.89e-109

Meiosis-specific coiled-coil domain-containing protein MEIOC; This family of proteins is found in eukaryotes. In humans, it is encoded for on the chromosomal position C17orf104.


:

Pssm-ID: 434527  Cd Length: 166  Bit Score: 333.59  E-value: 2.89e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530411953  747 RSGPASELHIRLEECCEQWRALEKERKKTELALAKNYPGKKVSSTNNTPVPRLTSNPSRVDRLIVDELRELARVVTLLGK 826
Cdd:pfam15189   1 RSGPSSELHLKLEECYEQFRSLEKERKKTEAELARNNPGKKVSSSNNSPVPRLPPNPSRVDRLIVDQLREHARVITLLAK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530411953  827 MERLRSSLLHASISTALDRHLESIHIVQSRRKDEIVNASNRQRQGVPRCQDDRDVFALASAIKEMCVATRKTRTALWCAL 906
Cdd:pfam15189  81 MERLRGMPLHANIHTALERHLEAIHITQARRKEEIINASNRQRQGAPRFQEDKDVLALAAALKELAAATRKARTALWCAL 160

                  ....*.
gi 530411953  907 QMTLPK 912
Cdd:pfam15189 161 QMTLPK 166
 
Name Accession Description Interval E-value
MEIOC pfam15189
Meiosis-specific coiled-coil domain-containing protein MEIOC; This family of proteins is found ...
747-912 2.89e-109

Meiosis-specific coiled-coil domain-containing protein MEIOC; This family of proteins is found in eukaryotes. In humans, it is encoded for on the chromosomal position C17orf104.


Pssm-ID: 434527  Cd Length: 166  Bit Score: 333.59  E-value: 2.89e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530411953  747 RSGPASELHIRLEECCEQWRALEKERKKTELALAKNYPGKKVSSTNNTPVPRLTSNPSRVDRLIVDELRELARVVTLLGK 826
Cdd:pfam15189   1 RSGPSSELHLKLEECYEQFRSLEKERKKTEAELARNNPGKKVSSSNNSPVPRLPPNPSRVDRLIVDQLREHARVITLLAK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530411953  827 MERLRSSLLHASISTALDRHLESIHIVQSRRKDEIVNASNRQRQGVPRCQDDRDVFALASAIKEMCVATRKTRTALWCAL 906
Cdd:pfam15189  81 MERLRGMPLHANIHTALERHLEAIHITQARRKEEIINASNRQRQGAPRFQEDKDVLALAAALKELAAATRKARTALWCAL 160

                  ....*.
gi 530411953  907 QMTLPK 912
Cdd:pfam15189 161 QMTLPK 166
 
Name Accession Description Interval E-value
MEIOC pfam15189
Meiosis-specific coiled-coil domain-containing protein MEIOC; This family of proteins is found ...
747-912 2.89e-109

Meiosis-specific coiled-coil domain-containing protein MEIOC; This family of proteins is found in eukaryotes. In humans, it is encoded for on the chromosomal position C17orf104.


Pssm-ID: 434527  Cd Length: 166  Bit Score: 333.59  E-value: 2.89e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530411953  747 RSGPASELHIRLEECCEQWRALEKERKKTELALAKNYPGKKVSSTNNTPVPRLTSNPSRVDRLIVDELRELARVVTLLGK 826
Cdd:pfam15189   1 RSGPSSELHLKLEECYEQFRSLEKERKKTEAELARNNPGKKVSSSNNSPVPRLPPNPSRVDRLIVDQLREHARVITLLAK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530411953  827 MERLRSSLLHASISTALDRHLESIHIVQSRRKDEIVNASNRQRQGVPRCQDDRDVFALASAIKEMCVATRKTRTALWCAL 906
Cdd:pfam15189  81 MERLRGMPLHANIHTALERHLEAIHITQARRKEEIINASNRQRQGAPRFQEDKDVLALAAALKELAAATRKARTALWCAL 160

                  ....*.
gi 530411953  907 QMTLPK 912
Cdd:pfam15189 161 QMTLPK 166
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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