|
Name |
Accession |
Description |
Interval |
E-value |
| DUF4592 |
pfam15262 |
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, ... |
173-268 |
7.86e-24 |
|
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, which lies to the N-terminus of the protein. This domain family is found in eukaryotes, and is typically between 114 and 130 amino acids in length. There are two completely conserved residues (L and A) that may be functionally important. In humans, the gene that encodes this protein lies in the position, chromosome 2 open reading frame 55.
:
Pssm-ID: 464602 [Multi-domain] Cd Length: 127 Bit Score: 97.87 E-value: 7.86e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 173 AKRGEDAGMSSEDDGLPRSPPEMSLLHDVGPGTTIKVSVVSPDHVSDSTVSAR------------------ISDNSLAPV 234
Cdd:pfam15262 14 TKRADDAGASSEDDGLPRSPPEISLLHEILLSTESKSSDPPQHLSSLSLAGTGseeeeqstpvkssrpkspFSPSGTIEP 93
|
90 100 110
....*....|....*....|....*....|....
gi 530368606 235 ADFSYPAESSSCLDNSAAKHKLQVKPRNQRSSKM 268
Cdd:pfam15262 94 INFDAPPQALACLDNSAAKHKLSVKPKNQRASRK 127
|
|
| PRK07003 super family |
cl35530 |
DNA polymerase III subunit gamma/tau; |
552-854 |
3.33e-06 |
|
DNA polymerase III subunit gamma/tau;
The actual alignment was detected with superfamily member PRK07003:
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 51.00 E-value: 3.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 552 EPGPGSLDAEAAAperpkaerAEAPPAGAERAAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARS 631
Cdd:PRK07003 359 EPAVTGGGAPGGG--------VPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAP 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 632 GPVWRSEAAlDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEdRNPFP 711
Cdd:PRK07003 431 APPATADRG-DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAAT-PAAVP 508
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 712 VKLRSTSLSLKYRDGAsqevkgvkrysAEVRLERSLTVLPKEEKCPL---GTAPAL-----RGTRAPSDQGKGKARPPEP 783
Cdd:PRK07003 509 DARAPAAASREDAPAA-----------AAPPAPEARPPTPAAAAPAAragGAAAALdvlrnAGMRVSSDRGARAAAAAKP 577
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 530368606 784 lsskpplprkpllqsftlphqPAPPDAGPGEREPRKEPRTAEKRPLRRGAEKSLPPAATGPGA--DGQPAPPW 854
Cdd:PRK07003 578 ---------------------AAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQAaeSRGAPPPW 629
|
|
| PRK07003 super family |
cl35530 |
DNA polymerase III subunit gamma/tau; |
333-648 |
5.52e-05 |
|
DNA polymerase III subunit gamma/tau;
The actual alignment was detected with superfamily member PRK07003:
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.15 E-value: 5.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 333 ARARRARLQHSSALTASVEEGGVPGEDPSSRPATPELAEPESAPTLRVEPPSPPEGPPNPGPDGGKQDGEAPPAGPCAPA 412
Cdd:PRK07003 383 PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSR 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 413 TDKAeevvcAPEDVASPFPTAIPEGDTTPPetdpAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREA 492
Cdd:PRK07003 463 CDER-----DAQPPADSGSASAPASDAPPD----AAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEAR 533
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 493 ETEPerGAGTEPERIGTepstapapsppapksclkhrpAAASegpaaspplaaaesppvepgpgsLDAEAAAPERPKAER 572
Cdd:PRK07003 534 PPTP--AAAAPAARAGG---------------------AAAA-----------------------LDVLRNAGMRVSSDR 567
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 530368606 573 AEAPPAGAERAAPERKAERggaelrgakkfsvsscRARPRPGVSRPLERASGRLPLARSGPVWRSEAALDDLQGLP 648
Cdd:PRK07003 568 GARAAAAAKPAAAPAAAPK----------------PAAPRVAVQVPTPRARAATGDAPPNGAARAEQAAESRGAPP 627
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| DUF4592 |
pfam15262 |
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, ... |
173-268 |
7.86e-24 |
|
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, which lies to the N-terminus of the protein. This domain family is found in eukaryotes, and is typically between 114 and 130 amino acids in length. There are two completely conserved residues (L and A) that may be functionally important. In humans, the gene that encodes this protein lies in the position, chromosome 2 open reading frame 55.
Pssm-ID: 464602 [Multi-domain] Cd Length: 127 Bit Score: 97.87 E-value: 7.86e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 173 AKRGEDAGMSSEDDGLPRSPPEMSLLHDVGPGTTIKVSVVSPDHVSDSTVSAR------------------ISDNSLAPV 234
Cdd:pfam15262 14 TKRADDAGASSEDDGLPRSPPEISLLHEILLSTESKSSDPPQHLSSLSLAGTGseeeeqstpvkssrpkspFSPSGTIEP 93
|
90 100 110
....*....|....*....|....*....|....
gi 530368606 235 ADFSYPAESSSCLDNSAAKHKLQVKPRNQRSSKM 268
Cdd:pfam15262 94 INFDAPPQALACLDNSAAKHKLSVKPKNQRASRK 127
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
552-854 |
3.33e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 51.00 E-value: 3.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 552 EPGPGSLDAEAAAperpkaerAEAPPAGAERAAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARS 631
Cdd:PRK07003 359 EPAVTGGGAPGGG--------VPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAP 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 632 GPVWRSEAAlDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEdRNPFP 711
Cdd:PRK07003 431 APPATADRG-DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAAT-PAAVP 508
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 712 VKLRSTSLSLKYRDGAsqevkgvkrysAEVRLERSLTVLPKEEKCPL---GTAPAL-----RGTRAPSDQGKGKARPPEP 783
Cdd:PRK07003 509 DARAPAAASREDAPAA-----------AAPPAPEARPPTPAAAAPAAragGAAAALdvlrnAGMRVSSDRGARAAAAAKP 577
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 530368606 784 lsskpplprkpllqsftlphqPAPPDAGPGEREPRKEPRTAEKRPLRRGAEKSLPPAATGPGA--DGQPAPPW 854
Cdd:PRK07003 578 ---------------------AAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQAaeSRGAPPPW 629
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
333-648 |
5.52e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.15 E-value: 5.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 333 ARARRARLQHSSALTASVEEGGVPGEDPSSRPATPELAEPESAPTLRVEPPSPPEGPPNPGPDGGKQDGEAPPAGPCAPA 412
Cdd:PRK07003 383 PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSR 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 413 TDKAeevvcAPEDVASPFPTAIPEGDTTPPetdpAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREA 492
Cdd:PRK07003 463 CDER-----DAQPPADSGSASAPASDAPPD----AAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEAR 533
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 493 ETEPerGAGTEPERIGTepstapapsppapksclkhrpAAASegpaaspplaaaesppvepgpgsLDAEAAAPERPKAER 572
Cdd:PRK07003 534 PPTP--AAAAPAARAGG---------------------AAAA-----------------------LDVLRNAGMRVSSDR 567
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 530368606 573 AEAPPAGAERAAPERKAERggaelrgakkfsvsscRARPRPGVSRPLERASGRLPLARSGPVWRSEAALDDLQGLP 648
Cdd:PRK07003 568 GARAAAAAKPAAAPAAAPK----------------PAAPRVAVQVPTPRARAATGDAPPNGAARAEQAAESRGAPP 627
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| DUF4592 |
pfam15262 |
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, ... |
173-268 |
7.86e-24 |
|
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, which lies to the N-terminus of the protein. This domain family is found in eukaryotes, and is typically between 114 and 130 amino acids in length. There are two completely conserved residues (L and A) that may be functionally important. In humans, the gene that encodes this protein lies in the position, chromosome 2 open reading frame 55.
Pssm-ID: 464602 [Multi-domain] Cd Length: 127 Bit Score: 97.87 E-value: 7.86e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 173 AKRGEDAGMSSEDDGLPRSPPEMSLLHDVGPGTTIKVSVVSPDHVSDSTVSAR------------------ISDNSLAPV 234
Cdd:pfam15262 14 TKRADDAGASSEDDGLPRSPPEISLLHEILLSTESKSSDPPQHLSSLSLAGTGseeeeqstpvkssrpkspFSPSGTIEP 93
|
90 100 110
....*....|....*....|....*....|....
gi 530368606 235 ADFSYPAESSSCLDNSAAKHKLQVKPRNQRSSKM 268
Cdd:pfam15262 94 INFDAPPQALACLDNSAAKHKLSVKPKNQRASRK 127
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
552-854 |
3.33e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 51.00 E-value: 3.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 552 EPGPGSLDAEAAAperpkaerAEAPPAGAERAAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARS 631
Cdd:PRK07003 359 EPAVTGGGAPGGG--------VPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAP 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 632 GPVWRSEAAlDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEdRNPFP 711
Cdd:PRK07003 431 APPATADRG-DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAAT-PAAVP 508
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 712 VKLRSTSLSLKYRDGAsqevkgvkrysAEVRLERSLTVLPKEEKCPL---GTAPAL-----RGTRAPSDQGKGKARPPEP 783
Cdd:PRK07003 509 DARAPAAASREDAPAA-----------AAPPAPEARPPTPAAAAPAAragGAAAALdvlrnAGMRVSSDRGARAAAAAKP 577
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 530368606 784 lsskpplprkpllqsftlphqPAPPDAGPGEREPRKEPRTAEKRPLRRGAEKSLPPAATGPGA--DGQPAPPW 854
Cdd:PRK07003 578 ---------------------AAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQAaeSRGAPPPW 629
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
423-886 |
5.11e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 50.71 E-value: 5.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 423 PEDVASPFPTAIPEGDTTPPETDPAATSEAPSARDGPErsvpkeAEPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGT 502
Cdd:PHA03247 2605 RGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHP------PPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASS 2678
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 503 EPERigtepstapapsppapkscLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAER 582
Cdd:PHA03247 2679 PPQR-------------------PRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAP 2739
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 583 AAPERKAerggaelrgAKKFSVSSCRARPRPGVSRPLERASGRLPLARSGPVwrseaalddlqgLPEPQHAKPGPRKLAE 662
Cdd:PHA03247 2740 APPAVPA---------GPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRR------------LTRPAVASLSESRESL 2798
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 663 RGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEDRNPFPvklrsTSLSLkyrdGASQEVKGVKRYSAEVR 742
Cdd:PHA03247 2799 PSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPP-----PSLPL----GGSVAPGGDVRRRPPSR 2869
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 743 LERSLTVLPKEEKCPLGTAPAlrgtraPSDQGKGKARPPEPlsskPPLPRKPLLQSFTLPHQPAPPDAGPGEREPRKEPR 822
Cdd:PHA03247 2870 SPAAKPAAPARPPVRRLARPA------VSRSTESFALPPDQ----PERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRP 2939
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 530368606 823 TAEKRPLRRGAEKSLPPAATGPGADGQPAPPWITVTRQKRRGTLDQPPNQEDKPGARTLKSEPG 886
Cdd:PHA03247 2940 QPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSR 3003
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
423-790 |
1.92e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 49.01 E-value: 1.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 423 PEDVASPFPTAIPEGDTTPPETDPAATSEAPSARDGPERSVPKeAEPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGT 502
Cdd:PHA03307 81 ANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPP-ASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASP 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 503 EPERIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAER 582
Cdd:PHA03307 160 AAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDS 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 583 AAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARSGPvwRSEAALDDLQGLPEPQHAKPGPRKLAE 662
Cdd:PHA03307 240 SSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSS--PRERSPSPSPSSPGSGPAPSSPRASSS 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 663 RGPQDSGDRAASpaGPRKSPQEAAAAPGTREPCPAaqePAPSEDRNPFPVKLRSTSLSLKYRDGASQEVKGvkrySAEVR 742
Cdd:PHA03307 318 SSSSRESSSSST--SSSSESSRGAAVSPGPSPSRS---PSPSRPPPPADPSSPRKRPRPSRAPSSPAASAG----RPTRR 388
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 530368606 743 LERSltvLPKEEKCPLGTAPALRGTRAPSDQGKGKARPPEPLSSKPPL 790
Cdd:PHA03307 389 RARA---AVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARYPLL 433
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
375-892 |
3.56e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.01 E-value: 3.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 375 APTLRVEPPSPPEGPPNPGPDGGKQDGEAPPagpcapatdkaeevvcAPEDVASPFPTAIPE---GDTTPPETDPAATSE 451
Cdd:PHA03247 2477 APVYRRPAEARFPFAAGAAPDPGGGGPPDPD----------------APPAPSRLAPAILPDepvGEPVHPRMLTWIRGL 2540
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 452 APSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGTEPERI-----GTEPSTAPAPSPPAPKSCL 526
Cdd:PHA03247 2541 EELASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSArprapVDDRGDPRGPAPPSPLPPD 2620
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 527 KHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAERAAPERKAERGGAELRGAKKFSVSS 606
Cdd:PHA03247 2621 THAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLAD 2700
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 607 CRARPRPGVSRPLERASGrLPLARSGPVWRSEAALDDLQGLPEPQHAKP----GPRKLAERGPQDSGDRAASPAGPRKSP 682
Cdd:PHA03247 2701 PPPPPPTPEPAPHALVSA-TPLPPGPAAARQASPALPAAPAPPAVPAGPatpgGPARPARPPTTAGPPAPAPPAAPAAGP 2779
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 683 QEAAAAPGTREPCPAAQEPAPSEDRNPFPVKLRSTSLSLkyrDGASQEVKGVKRYSAEVRLERSLTVLPKEEKCPLGTAP 762
Cdd:PHA03247 2780 PRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAAL---PPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSV 2856
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 763 ALRG-------TRAPSDQGKGKARPPEPLSSKPPLPRKPllQSFTLPHQPAPPDAGPGEREPRKEPRTAEKRPLRRGAEK 835
Cdd:PHA03247 2857 APGGdvrrrppSRSPAAKPAAPARPPVRRLARPAVSRST--ESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPP 2934
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 530368606 836 S--LPPAATGPGADGQPAPPWITVTRQKRRGTLdqPPNQEDKPGARTLKSEPGKQAKVP 892
Cdd:PHA03247 2935 PppRPQPPLAPTTDPAGAGEPSGAVPQPWLGAL--VPGRVAVPRFRVPQPAPSREAPAS 2991
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
333-648 |
5.52e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.15 E-value: 5.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 333 ARARRARLQHSSALTASVEEGGVPGEDPSSRPATPELAEPESAPTLRVEPPSPPEGPPNPGPDGGKQDGEAPPAGPCAPA 412
Cdd:PRK07003 383 PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSR 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 413 TDKAeevvcAPEDVASPFPTAIPEGDTTPPetdpAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREA 492
Cdd:PRK07003 463 CDER-----DAQPPADSGSASAPASDAPPD----AAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEAR 533
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 493 ETEPerGAGTEPERIGTepstapapsppapksclkhrpAAASegpaaspplaaaesppvepgpgsLDAEAAAPERPKAER 572
Cdd:PRK07003 534 PPTP--AAAAPAARAGG---------------------AAAA-----------------------LDVLRNAGMRVSSDR 567
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 530368606 573 AEAPPAGAERAAPERKAERggaelrgakkfsvsscRARPRPGVSRPLERASGRLPLARSGPVWRSEAALDDLQGLP 648
Cdd:PRK07003 568 GARAAAAAKPAAAPAAAPK----------------PAAPRVAVQVPTPRARAATGDAPPNGAARAEQAAESRGAPP 627
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
499-709 |
1.04e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 46.41 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 499 GAGTEPERIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGS--LDAEAAAPERPKAERAEAP 576
Cdd:PRK12323 369 GGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSpaPEALAAARQASARGPGGAP 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 577 -PAGAERAAPERKAERGGAELRGakkfsvsscRARPRPGVSRPLERASGRLPLARSGPVWRSeaaLDDLQGLPEPQHAKP 655
Cdd:PRK12323 449 aPAPAPAAAPAAAARPAAAGPRP---------VAAAAAAAPARAAPAAAPAPADDDPPPWEE---LPPEFASPAPAQPDA 516
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 530368606 656 GPRKLAERGPQDSGDRAASPAGPRKSPQEAAA----APGTREPCPAAQEPAPSEDRNP 709
Cdd:PRK12323 517 APAGWVAESIPDPATADPDDAFETLAPAPAAApaprAAAATEPVVAPRPPRASASGLP 574
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
555-902 |
2.95e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.98 E-value: 2.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 555 PGSLDAEAAAperpkAERAEAPPAGAERAAPERKAERGGAELRGAKKFSVSScRARPRPGVSRPLERASGRLPLARSGPV 634
Cdd:PRK07764 365 PSASDDERGL-----LARLERLERRLGVAGGAGAPAAAAPSAAAAAPAAAPA-PAAAAPAAAAAPAPAAAPQPAPAPAPA 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 635 WRSEAALDDLQGLPEPQHAkPGPRKLAERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEDR------- 707
Cdd:PRK07764 439 PAPPSPAGNAPAGGAPSPP-PAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAAtlrerwp 517
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 708 -------------------NPFPVKLRSTSLSLKYRDGASQEVKGVKRYSAEVRlerslTVLPKEekcpLGTAPALRGTR 768
Cdd:PRK07764 518 eilaavpkrsrktwaillpEATVLGVRGDTLVLGFSTGGLARRFASPGNAEVLV-----TALAEE----LGGDWQVEAVV 588
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 769 APSDQGKGKARPPEPLSSKPPlPRKPLLQSFTLPHQPAPPDAGPGEREPRKEPRTAEKRPLRRGAEKSlPPAATGPGADG 848
Cdd:PRK07764 589 GPAPGAAGGEGPPAPASSGPP-EEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPK-HVAVPDASDGG 666
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 530368606 849 QPAPPWITVTRQKRRGTLDQPPNQEDKPGARTLKSEPGK-QAKVPERGQEPVKQA 902
Cdd:PRK07764 667 DGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPaATPPAGQADDPAAQP 721
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
441-853 |
4.64e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.39 E-value: 4.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 441 PPETDPAATSEAPSARDGPERSVPKEAEPTPPVL--PDEEKGPPGPAPEPEREAETEPERGAGTEPERiGTEPSTAPAPS 518
Cdd:PHA03307 44 VSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTeaPANESRSTPTWSLSTLAPASPAREGSPTPPGP-SSPDPPPPTPP 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 519 PPAPKSclKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAERAAPERKAERGGAELRG 598
Cdd:PHA03307 123 PASPPP--SPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPA 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 599 AKKfsvSSCRARPRPGVSRPLERASGRLPLARSGPVWRSEAALDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASPAGP 678
Cdd:PHA03307 201 AAS---PRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNG 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 679 RKS-PQEAAAAPGTREPCPAAQEPAPSEDRNPfpvklrSTSLSLKYRDGasqevkgvkrySAEVRLERSLTVLPKEEKCP 757
Cdd:PHA03307 278 PSSrPGPASSSSSPRERSPSPSPSSPGSGPAP------SSPRASSSSSS-----------SRESSSSSTSSSSESSRGAA 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 758 LGTAPALrgtrapsdqgkgkARPPEPLSSKPPLPRKPLLQSFTLPHQPAPPDAGPGEREPRKEPRTAEKRPLRRGAEKSL 837
Cdd:PHA03307 341 VSPGPSP-------------SRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRF 407
|
410
....*....|....*....
gi 530368606 838 P---PAATGPGADGQPAPP 853
Cdd:PHA03307 408 PagrPRPSPLDAGAASGAF 426
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
426-709 |
5.31e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.07 E-value: 5.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 426 VASPFPTAIPEGDTTPPETDPAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGTEPE 505
Cdd:PRK07003 372 VPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 506 RIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAERAAP 585
Cdd:PRK07003 452 KANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPE 531
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 586 ERKAErggaelrgakkfsvsscrarprPGVSRPLERASGrlplarsgpvwrSEAALDDLQglpepqhaKPGPRKLAERGp 665
Cdd:PRK07003 532 ARPPT----------------------PAAAAPAARAGG------------AAAALDVLR--------NAGMRVSSDRG- 568
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 530368606 666 QDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEDRNP 709
Cdd:PRK07003 569 ARAAAAAKPAAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNG 612
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
528-709 |
1.01e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.05 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 528 HRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAERAAPERKAERggaelrgakkfsvssc 607
Cdd:PRK07764 636 PAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPA---------------- 699
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 608 RARPRPGVSRPLERASGRLPLARSGPV--WRSEAALDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASPAGPRKSPQEA 685
Cdd:PRK07764 700 QPAPAPAATPPAGQADDPAAQPPQAAQgaSAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPP 779
|
170 180
....*....|....*....|....
gi 530368606 686 AAAPGTREpcPAAQEPAPSEDRNP 709
Cdd:PRK07764 780 SEEEEMAE--DDAPSMDDEDRRDA 801
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
560-897 |
1.13e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 43.24 E-value: 1.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 560 AEAAAPERPKAERAEAPPAGAERAAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLA-RSGPVWRSE 638
Cdd:PHA03307 56 VAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASpPPSPAPDLS 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 639 AALDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPC--PAAQEPAPSEDRNPFPVKLRS 716
Cdd:PHA03307 136 EMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEppPSTPPAAASPRPPRRSSPISA 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 717 TSLSLKYRDGASQEVKGVKRYSAEVRLERSLTVLPKEEKCPLGTAPALRGTRAPSDQGKGKARPPEPLSSKP------PL 790
Cdd:PHA03307 216 SASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSssspreRS 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 791 PRKPLLQSFTLPHQPAPPDAGPGEREPRKEPRTAEKRPLRRGAEKSLPPAATGPGADGQPAPPWITVTRQKRRGTLDQPP 870
Cdd:PHA03307 296 PSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAP 375
|
330 340
....*....|....*....|....*..
gi 530368606 871 NQEDKPGARTLKSEPGKQAKVPERGQE 897
Cdd:PHA03307 376 SSPAASAGRPTRRRARAAVAGRARRRD 402
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
435-848 |
1.47e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.67 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 435 PEGDTTPPETDPAATSEAPSARDGPERSVPKEAEPTPPVLPdeekgppgpapEPEREAETEPERGAGTEPERIGTEPSTA 514
Cdd:PRK07764 381 LERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAA-----------APAPAAAPQPAPAPAPAPAPPSPAGNAP 449
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 515 PAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPgslDAEAAAPERPKAERAEAPPAGAER-------AAPER 587
Cdd:PRK07764 450 AGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAP---AAAPAAPAAPAAPAGADDAATLRErwpeilaAVPKR 526
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 588 KAERGGAELRGAK-----------KFSVSSCRAR-PRPGVSRPLERASgrlpLARSGPVWRSEAALD-DLQGLPEPQHAK 654
Cdd:PRK07764 527 SRKTWAILLPEATvlgvrgdtlvlGFSTGGLARRfASPGNAEVLVTAL----AEELGGDWQVEAVVGpAPGAAGGEGPPA 602
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 655 PGPRKLAERGPQ-DSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEDRNPFPVKLRSTSLSlKYRDGASQEVKG 733
Cdd:PRK07764 603 PASSGPPEEAARpAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGW-PAKAGGAAPAAP 681
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 734 VKRYSAEVRLERSLTVLPKEEKCPLGTAPALRGTR---APSDQGKGKARPPEPLSSKPPLPRKPLLQSFTLPHQPAPPDA 810
Cdd:PRK07764 682 PPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDpaaQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPP 761
|
410 420 430
....*....|....*....|....*....|....*...
gi 530368606 811 GPGEREPrkePRTAEKRPLRRGAEKSLPPAATGPGADG 848
Cdd:PRK07764 762 PAPAPAA---APAAAPPPSPPSEEEEMAEDDAPSMDDE 796
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
425-649 |
3.27e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.40 E-value: 3.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 425 DVASPFPTAIPEGDTTPPETDPAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGTEP 504
Cdd:PRK12323 371 GAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAP 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 505 ER--IGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAER 582
Cdd:PRK12323 451 APapAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPA 530
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 530368606 583 AAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARSGpvWRSEAALDDLQGLPE 649
Cdd:PRK12323 531 TADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGD--WPALAARLPVRGLAQ 595
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
498-708 |
5.39e-03 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 40.66 E-value: 5.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 498 RGAGTEPERIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPP 577
Cdd:PRK12678 59 RGGGAAAAAATPAAPAAAARRAARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAAR 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 578 AGAERAAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARSgpvwRSEAALDDLQGLPEPQHAKPGP 657
Cdd:PRK12678 139 RGAARKAGEGGEQPATEARADAAERTEEEERDERRRRGDREDRQAEAERGERGR----REERGRDGDDRDRRDRREQGDR 214
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 530368606 658 RKlaERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEDRN 708
Cdd:PRK12678 215 RE--ERGRRDGGDRRGRRRRRDRRDARGDDNREDRGDRDGDDGEGRGGRRG 263
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
527-635 |
6.39e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.47 E-value: 6.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368606 527 KHRPAAASEGPAASPPLAAAESPPVEPgpgsldaEAAAPERPKAERAEAPPAGAERAAPERKAERGGAELRGAKKFSVSS 606
Cdd:PRK14951 391 AAPVAQAAAAPAPAAAPAAAASAPAAP-------PAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETVAIP 463
|
90 100 110
....*....|....*....|....*....|....
gi 530368606 607 CRARPRPGVSRPLERASG-----RLPLARSGPVW 635
Cdd:PRK14951 464 VRVAPEPAVASAAPAPAAapaaaRLTPTEEGDVW 497
|
|
| |
