|
Name |
Accession |
Description |
Interval |
E-value |
| DUF4592 |
pfam15262 |
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, ... |
145-240 |
1.17e-23 |
|
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, which lies to the N-terminus of the protein. This domain family is found in eukaryotes, and is typically between 114 and 130 amino acids in length. There are two completely conserved residues (L and A) that may be functionally important. In humans, the gene that encodes this protein lies in the position, chromosome 2 open reading frame 55.
:
Pssm-ID: 464602 [Multi-domain] Cd Length: 127 Bit Score: 97.10 E-value: 1.17e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 145 AKRGEDAGMSSEDDGLPRSPPEMSLLHDVGPGTTIKVSVVSPDHVSDSTVSAR------------------ISDNSLAPV 206
Cdd:pfam15262 14 TKRADDAGASSEDDGLPRSPPEISLLHEILLSTESKSSDPPQHLSSLSLAGTGseeeeqstpvkssrpkspFSPSGTIEP 93
|
90 100 110
....*....|....*....|....*....|....
gi 530368610 207 ADFSYPAESSSCLDNSAAKHKLQVKPRNQRSSKM 240
Cdd:pfam15262 94 INFDAPPQALACLDNSAAKHKLSVKPKNQRASRK 127
|
|
| PRK07003 super family |
cl35530 |
DNA polymerase III subunit gamma/tau; |
524-826 |
4.72e-06 |
|
DNA polymerase III subunit gamma/tau;
The actual alignment was detected with superfamily member PRK07003:
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 50.62 E-value: 4.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 524 EPGPGSLDAEAAAperpkaerAEAPPAGAERAAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARS 603
Cdd:PRK07003 359 EPAVTGGGAPGGG--------VPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAP 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 604 GPVWRSEAAlDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEdRNPFP 683
Cdd:PRK07003 431 APPATADRG-DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAAT-PAAVP 508
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 684 VKLRSTSLSLKYRDGAsqevkgvkrysAEVRLERSLTVLPKEEKCPL---GTAPAL-----RGTRAPSDQGKGKARPPEP 755
Cdd:PRK07003 509 DARAPAAASREDAPAA-----------AAPPAPEARPPTPAAAAPAAragGAAAALdvlrnAGMRVSSDRGARAAAAAKP 577
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 530368610 756 lsskpplprkpllqsftlphqPAPPDAGPGEREPRKEPRTAEKRPLRRGAEKSLPPAATGPGA--DGQPAPPW 826
Cdd:PRK07003 578 ---------------------AAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQAaeSRGAPPPW 629
|
|
| PRK07003 super family |
cl35530 |
DNA polymerase III subunit gamma/tau; |
305-620 |
6.12e-05 |
|
DNA polymerase III subunit gamma/tau;
The actual alignment was detected with superfamily member PRK07003:
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.15 E-value: 6.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 305 ARARRARLQHSSALTASVEEGGVPGEDPSSRPATPELAEPESAPTLRVEPPSPPEGPPNPGPDGGKQDGEAPPAGPCAPA 384
Cdd:PRK07003 383 PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSR 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 385 TDKAeevvcAPEDVASPFPTAIPEGDTTPPetdpAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREA 464
Cdd:PRK07003 463 CDER-----DAQPPADSGSASAPASDAPPD----AAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEAR 533
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 465 ETEPerGAGTEPERIGTepstapapsppapksclkhrpAAASegpaaspplaaaesppvepgpgsLDAEAAAPERPKAER 544
Cdd:PRK07003 534 PPTP--AAAAPAARAGG---------------------AAAA-----------------------LDVLRNAGMRVSSDR 567
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 530368610 545 AEAPPAGAERAAPERKAERggaelrgakkfsvsscRARPRPGVSRPLERASGRLPLARSGPVWRSEAALDDLQGLP 620
Cdd:PRK07003 568 GARAAAAAKPAAAPAAAPK----------------PAAPRVAVQVPTPRARAATGDAPPNGAARAEQAAESRGAPP 627
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| DUF4592 |
pfam15262 |
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, ... |
145-240 |
1.17e-23 |
|
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, which lies to the N-terminus of the protein. This domain family is found in eukaryotes, and is typically between 114 and 130 amino acids in length. There are two completely conserved residues (L and A) that may be functionally important. In humans, the gene that encodes this protein lies in the position, chromosome 2 open reading frame 55.
Pssm-ID: 464602 [Multi-domain] Cd Length: 127 Bit Score: 97.10 E-value: 1.17e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 145 AKRGEDAGMSSEDDGLPRSPPEMSLLHDVGPGTTIKVSVVSPDHVSDSTVSAR------------------ISDNSLAPV 206
Cdd:pfam15262 14 TKRADDAGASSEDDGLPRSPPEISLLHEILLSTESKSSDPPQHLSSLSLAGTGseeeeqstpvkssrpkspFSPSGTIEP 93
|
90 100 110
....*....|....*....|....*....|....
gi 530368610 207 ADFSYPAESSSCLDNSAAKHKLQVKPRNQRSSKM 240
Cdd:pfam15262 94 INFDAPPQALACLDNSAAKHKLSVKPKNQRASRK 127
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
524-826 |
4.72e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 50.62 E-value: 4.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 524 EPGPGSLDAEAAAperpkaerAEAPPAGAERAAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARS 603
Cdd:PRK07003 359 EPAVTGGGAPGGG--------VPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAP 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 604 GPVWRSEAAlDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEdRNPFP 683
Cdd:PRK07003 431 APPATADRG-DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAAT-PAAVP 508
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 684 VKLRSTSLSLKYRDGAsqevkgvkrysAEVRLERSLTVLPKEEKCPL---GTAPAL-----RGTRAPSDQGKGKARPPEP 755
Cdd:PRK07003 509 DARAPAAASREDAPAA-----------AAPPAPEARPPTPAAAAPAAragGAAAALdvlrnAGMRVSSDRGARAAAAAKP 577
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 530368610 756 lsskpplprkpllqsftlphqPAPPDAGPGEREPRKEPRTAEKRPLRRGAEKSLPPAATGPGA--DGQPAPPW 826
Cdd:PRK07003 578 ---------------------AAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQAaeSRGAPPPW 629
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
305-620 |
6.12e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.15 E-value: 6.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 305 ARARRARLQHSSALTASVEEGGVPGEDPSSRPATPELAEPESAPTLRVEPPSPPEGPPNPGPDGGKQDGEAPPAGPCAPA 384
Cdd:PRK07003 383 PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSR 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 385 TDKAeevvcAPEDVASPFPTAIPEGDTTPPetdpAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREA 464
Cdd:PRK07003 463 CDER-----DAQPPADSGSASAPASDAPPD----AAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEAR 533
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 465 ETEPerGAGTEPERIGTepstapapsppapksclkhrpAAASegpaaspplaaaesppvepgpgsLDAEAAAPERPKAER 544
Cdd:PRK07003 534 PPTP--AAAAPAARAGG---------------------AAAA-----------------------LDVLRNAGMRVSSDR 567
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 530368610 545 AEAPPAGAERAAPERKAERggaelrgakkfsvsscRARPRPGVSRPLERASGRLPLARSGPVWRSEAALDDLQGLP 620
Cdd:PRK07003 568 GARAAAAAKPAAAPAAAPK----------------PAAPRVAVQVPTPRARAATGDAPPNGAARAEQAAESRGAPP 627
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| DUF4592 |
pfam15262 |
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, ... |
145-240 |
1.17e-23 |
|
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, which lies to the N-terminus of the protein. This domain family is found in eukaryotes, and is typically between 114 and 130 amino acids in length. There are two completely conserved residues (L and A) that may be functionally important. In humans, the gene that encodes this protein lies in the position, chromosome 2 open reading frame 55.
Pssm-ID: 464602 [Multi-domain] Cd Length: 127 Bit Score: 97.10 E-value: 1.17e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 145 AKRGEDAGMSSEDDGLPRSPPEMSLLHDVGPGTTIKVSVVSPDHVSDSTVSAR------------------ISDNSLAPV 206
Cdd:pfam15262 14 TKRADDAGASSEDDGLPRSPPEISLLHEILLSTESKSSDPPQHLSSLSLAGTGseeeeqstpvkssrpkspFSPSGTIEP 93
|
90 100 110
....*....|....*....|....*....|....
gi 530368610 207 ADFSYPAESSSCLDNSAAKHKLQVKPRNQRSSKM 240
Cdd:pfam15262 94 INFDAPPQALACLDNSAAKHKLSVKPKNQRASRK 127
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
524-826 |
4.72e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 50.62 E-value: 4.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 524 EPGPGSLDAEAAAperpkaerAEAPPAGAERAAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARS 603
Cdd:PRK07003 359 EPAVTGGGAPGGG--------VPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAP 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 604 GPVWRSEAAlDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEdRNPFP 683
Cdd:PRK07003 431 APPATADRG-DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAAT-PAAVP 508
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 684 VKLRSTSLSLKYRDGAsqevkgvkrysAEVRLERSLTVLPKEEKCPL---GTAPAL-----RGTRAPSDQGKGKARPPEP 755
Cdd:PRK07003 509 DARAPAAASREDAPAA-----------AAPPAPEARPPTPAAAAPAAragGAAAALdvlrnAGMRVSSDRGARAAAAAKP 577
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 530368610 756 lsskpplprkpllqsftlphqPAPPDAGPGEREPRKEPRTAEKRPLRRGAEKSLPPAATGPGA--DGQPAPPW 826
Cdd:PRK07003 578 ---------------------AAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQAaeSRGAPPPW 629
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
395-858 |
7.10e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 50.32 E-value: 7.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 395 PEDVASPFPTAIPEGDTTPPETDPAATSEAPSARDGPErsvpkeAEPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGT 474
Cdd:PHA03247 2605 RGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHP------PPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASS 2678
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 475 EPERigtepstapapsppapkscLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAER 554
Cdd:PHA03247 2679 PPQR-------------------PRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAP 2739
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 555 AAPERKAerggaelrgAKKFSVSSCRARPRPGVSRPLERASGRLPLARSGPVwrseaalddlqgLPEPQHAKPGPRKLAE 634
Cdd:PHA03247 2740 APPAVPA---------GPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRR------------LTRPAVASLSESRESL 2798
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 635 RGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEDRNPFPvklrsTSLSLkyrdGASQEVKGVKRYSAEVR 714
Cdd:PHA03247 2799 PSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPP-----PSLPL----GGSVAPGGDVRRRPPSR 2869
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 715 LERSLTVLPKEEKCPLGTAPAlrgtraPSDQGKGKARPPEPlsskPPLPRKPLLQSFTLPHQPAPPDAGPGEREPRKEPR 794
Cdd:PHA03247 2870 SPAAKPAAPARPPVRRLARPA------VSRSTESFALPPDQ----PERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRP 2939
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 530368610 795 TAEKRPLRRGAEKSLPPAATGPGADGQPAPPWITVTRQKRRGTLDQPPNQEDKPGARTLKSEPG 858
Cdd:PHA03247 2940 QPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSR 3003
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
395-762 |
2.77e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 48.24 E-value: 2.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 395 PEDVASPFPTAIPEGDTTPPETDPAATSEAPSARDGPERSVPKeAEPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGT 474
Cdd:PHA03307 81 ANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPP-ASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASP 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 475 EPERIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAER 554
Cdd:PHA03307 160 AAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDS 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 555 AAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARSGPvwRSEAALDDLQGLPEPQHAKPGPRKLAE 634
Cdd:PHA03307 240 SSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSS--PRERSPSPSPSSPGSGPAPSSPRASSS 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 635 RGPQDSGDRAASpaGPRKSPQEAAAAPGTREPCPAaqePAPSEDRNPFPVKLRSTSLSLKYRDGASQEVKGvkrySAEVR 714
Cdd:PHA03307 318 SSSSRESSSSST--SSSSESSRGAAVSPGPSPSRS---PSPSRPPPPADPSSPRKRPRPSRAPSSPAASAG----RPTRR 388
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 530368610 715 LERSltvLPKEEKCPLGTAPALRGTRAPSDQGKGKARPPEPLSSKPPL 762
Cdd:PHA03307 389 RARA---AVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARYPLL 433
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
347-864 |
4.54e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 47.63 E-value: 4.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 347 APTLRVEPPSPPEGPPNPGPDGGKQDGEAPPagpcapatdkaeevvcAPEDVASPFPTAIPE---GDTTPPETDPAATSE 423
Cdd:PHA03247 2477 APVYRRPAEARFPFAAGAAPDPGGGGPPDPD----------------APPAPSRLAPAILPDepvGEPVHPRMLTWIRGL 2540
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 424 APSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGTEPERI-----GTEPSTAPAPSPPAPKSCL 498
Cdd:PHA03247 2541 EELASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSArprapVDDRGDPRGPAPPSPLPPD 2620
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 499 KHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAERAAPERKAERGGAELRGAKKFSVSS 578
Cdd:PHA03247 2621 THAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLAD 2700
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 579 CRARPRPGVSRPLERASGrLPLARSGPVWRSEAALDDLQGLPEPQHAKP----GPRKLAERGPQDSGDRAASPAGPRKSP 654
Cdd:PHA03247 2701 PPPPPPTPEPAPHALVSA-TPLPPGPAAARQASPALPAAPAPPAVPAGPatpgGPARPARPPTTAGPPAPAPPAAPAAGP 2779
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 655 QEAAAAPGTREPCPAAQEPAPSEDRNPFPVKLRSTSLSLkyrDGASQEVKGVKRYSAEVRLERSLTVLPKEEKCPLGTAP 734
Cdd:PHA03247 2780 PRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAAL---PPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSV 2856
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 735 ALRG-------TRAPSDQGKGKARPPEPLSSKPPLPRKPllQSFTLPHQPAPPDAGPGEREPRKEPRTAEKRPLRRGAEK 807
Cdd:PHA03247 2857 APGGdvrrrppSRSPAAKPAAPARPPVRRLARPAVSRST--ESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPP 2934
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 530368610 808 S--LPPAATGPGADGQPAPPWITVTRQKRRGTLdqPPNQEDKPGARTLKSEPGKQAKVP 864
Cdd:PHA03247 2935 PppRPQPPLAPTTDPAGAGEPSGAVPQPWLGAL--VPGRVAVPRFRVPQPAPSREAPAS 2991
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
305-620 |
6.12e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.15 E-value: 6.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 305 ARARRARLQHSSALTASVEEGGVPGEDPSSRPATPELAEPESAPTLRVEPPSPPEGPPNPGPDGGKQDGEAPPAGPCAPA 384
Cdd:PRK07003 383 PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSR 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 385 TDKAeevvcAPEDVASPFPTAIPEGDTTPPetdpAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREA 464
Cdd:PRK07003 463 CDER-----DAQPPADSGSASAPASDAPPD----AAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEAR 533
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 465 ETEPerGAGTEPERIGTepstapapsppapksclkhrpAAASegpaaspplaaaesppvepgpgsLDAEAAAPERPKAER 544
Cdd:PRK07003 534 PPTP--AAAAPAARAGG---------------------AAAA-----------------------LDVLRNAGMRVSSDR 567
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 530368610 545 AEAPPAGAERAAPERKAERggaelrgakkfsvsscRARPRPGVSRPLERASGRLPLARSGPVWRSEAALDDLQGLP 620
Cdd:PRK07003 568 GARAAAAAKPAAAPAAAPK----------------PAAPRVAVQVPTPRARAATGDAPPNGAARAEQAAESRGAPP 627
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
471-681 |
1.28e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 46.02 E-value: 1.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 471 GAGTEPERIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGS--LDAEAAAPERPKAERAEAP 548
Cdd:PRK12323 369 GGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSpaPEALAAARQASARGPGGAP 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 549 -PAGAERAAPERKAERGGAELRGakkfsvsscRARPRPGVSRPLERASGRLPLARSGPVWrsEAALDDLqGLPEPQHAKP 627
Cdd:PRK12323 449 aPAPAPAAAPAAAARPAAAGPRP---------VAAAAAAAPARAAPAAAPAPADDDPPPW--EELPPEF-ASPAPAQPDA 516
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 530368610 628 GPRKLAERGPQDSGDRAASPAGPRKSPQEAAA----APGTREPCPAAQEPAPSEDRNP 681
Cdd:PRK12323 517 APAGWVAESIPDPATADPDDAFETLAPAPAAApaprAAAATEPVVAPRPPRASASGLP 574
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
527-874 |
3.75e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.59 E-value: 3.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 527 PGSLDAEAAAperpkAERAEAPPAGAERAAPERKAERGGAELRGAKKFSVSScRARPRPGVSRPLERASGRLPLARSGPV 606
Cdd:PRK07764 365 PSASDDERGL-----LARLERLERRLGVAGGAGAPAAAAPSAAAAAPAAAPA-PAAAAPAAAAAPAPAAAPQPAPAPAPA 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 607 WRSEAALDDLQGLPEPQHAkPGPRKLAERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEDR------- 679
Cdd:PRK07764 439 PAPPSPAGNAPAGGAPSPP-PAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAAtlrerwp 517
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 680 -------------------NPFPVKLRSTSLSLKYRDGASQEVKGVKRYSAEVRlerslTVLPKEekcpLGTAPALRGTR 740
Cdd:PRK07764 518 eilaavpkrsrktwaillpEATVLGVRGDTLVLGFSTGGLARRFASPGNAEVLV-----TALAEE----LGGDWQVEAVV 588
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 741 APSDQGKGKARPPEPLSSKPPlPRKPLLQSFTLPHQPAPPDAGPGEREPRKEPRTAEKRPLRRGAEKSlPPAATGPGADG 820
Cdd:PRK07764 589 GPAPGAAGGEGPPAPASSGPP-EEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPK-HVAVPDASDGG 666
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 530368610 821 QPAPPWITVTRQKRRGTLDQPPNQEDKPGARTLKSEPGK-QAKVPERGQEPVKQA 874
Cdd:PRK07764 667 DGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPaATPPAGQADDPAAQP 721
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
398-681 |
5.98e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 43.68 E-value: 5.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 398 VASPFPTAIPEGDTTPPETDPAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGTEPE 477
Cdd:PRK07003 372 VPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 478 RIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAERAAP 557
Cdd:PRK07003 452 KANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPE 531
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 558 ERKAErggaelrgakkfsvsscrarprPGVSRPLERASGrlplarsgpvwrSEAALDDLQglpepqhaKPGPRKLAERGp 637
Cdd:PRK07003 532 ARPPT----------------------PAAAAPAARAGG------------AAAALDVLR--------NAGMRVSSDRG- 568
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 530368610 638 QDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEDRNP 681
Cdd:PRK07003 569 ARAAAAAKPAAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNG 612
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
413-825 |
6.03e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.01 E-value: 6.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 413 PPETDPAATSEAPSARDGPERSVPKEAEPTPPVL--PDEEKGPPGPAPEPEREAETEPERGAGTEPERiGTEPSTAPAPS 490
Cdd:PHA03307 44 VSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTeaPANESRSTPTWSLSTLAPASPAREGSPTPPGP-SSPDPPPPTPP 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 491 PPAPKSclKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAERAAPERKAERGGAELRG 570
Cdd:PHA03307 123 PASPPP--SPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPA 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 571 AKKfsvSSCRARPRPGVSRPLERASGRLPLARSGPVWRSEAALDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASPAGP 650
Cdd:PHA03307 201 AAS---PRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNG 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 651 RKS-PQEAAAAPGTREPCPAAQEPAPSEDRNPfpvklrSTSLSLKYRDGasqevkgvkrySAEVRLERSLTVLPKEEKCP 729
Cdd:PHA03307 278 PSSrPGPASSSSSPRERSPSPSPSSPGSGPAP------SSPRASSSSSS-----------SRESSSSSTSSSSESSRGAA 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 730 LGTAPALrgtrapsdqgkgkARPPEPLSSKPPLPRKPLLQSFTLPHQPAPPDAGPGEREPRKEPRTAEKRPLRRGAEKSL 809
Cdd:PHA03307 341 VSPGPSP-------------SRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRF 407
|
410
....*....|....*....
gi 530368610 810 P---PAATGPGADGQPAPP 825
Cdd:PHA03307 408 PagrPRPSPLDAGAASGAF 426
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
500-681 |
1.16e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.67 E-value: 1.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 500 HRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAERAAPERKAERggaelrgakkfsvssc 579
Cdd:PRK07764 636 PAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPA---------------- 699
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 580 RARPRPGVSRPLERASGRLPLARSGPV--WRSEAALDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASPAGPRKSPQEA 657
Cdd:PRK07764 700 QPAPAPAATPPAGQADDPAAQPPQAAQgaSAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPP 779
|
170 180
....*....|....*....|....
gi 530368610 658 AAAPGTREpcPAAQEPAPSEDRNP 681
Cdd:PRK07764 780 SEEEEMAE--DDAPSMDDEDRRDA 801
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
532-869 |
1.36e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.85 E-value: 1.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 532 AEAAAPERPKAERAEAPPAGAERAAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLA-RSGPVWRSE 610
Cdd:PHA03307 56 VAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASpPPSPAPDLS 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 611 AALDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPC--PAAQEPAPSEDRNPFPVKLRS 688
Cdd:PHA03307 136 EMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEppPSTPPAAASPRPPRRSSPISA 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 689 TSLSLKYRDGASQEVKGVKRYSAEVRLERSLTVLPKEEKCPLGTAPALRGTRAPSDQGKGKARPPEPLSSKP------PL 762
Cdd:PHA03307 216 SASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSssspreRS 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 763 PRKPLLQSFTLPHQPAPPDAGPGEREPRKEPRTAEKRPLRRGAEKSLPPAATGPGADGQPAPPWITVTRQKRRGTLDQPP 842
Cdd:PHA03307 296 PSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAP 375
|
330 340
....*....|....*....|....*..
gi 530368610 843 NQEDKPGARTLKSEPGKQAKVPERGQE 869
Cdd:PHA03307 376 SSPAASAGRPTRRRARAAVAGRARRRD 402
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
407-820 |
2.05e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.90 E-value: 2.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 407 PEGDTTPPETDPAATSEAPSARDGPERSVPKEAEPTPPVLPdeekgppgpapEPEREAETEPERGAGTEPERIGTEPSTA 486
Cdd:PRK07764 381 LERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAA-----------APAPAAAPQPAPAPAPAPAPPSPAGNAP 449
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 487 PAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPgslDAEAAAPERPKAERAEAPPAGAER-------AAPER 559
Cdd:PRK07764 450 AGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAP---AAAPAAPAAPAAPAGADDAATLRErwpeilaAVPKR 526
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 560 KAERGGAELRGAK-----------KFSVSSCRAR-PRPGVSRPLERASgrlpLARSGPVWRSEAALD-DLQGLPEPQHAK 626
Cdd:PRK07764 527 SRKTWAILLPEATvlgvrgdtlvlGFSTGGLARRfASPGNAEVLVTAL----AEELGGDWQVEAVVGpAPGAAGGEGPPA 602
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 627 PGPRKLAERGPQ-DSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEDRNPFPVKLRSTSLSlKYRDGASQEVKG 705
Cdd:PRK07764 603 PASSGPPEEAARpAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGW-PAKAGGAAPAAP 681
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 706 VKRYSAEVRLERSLTVLPKEEKCPLGTAPALRGTR---APSDQGKGKARPPEPLSSKPPLPRKPLLQSFTLPHQPAPPDA 782
Cdd:PRK07764 682 PPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDpaaQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPP 761
|
410 420 430
....*....|....*....|....*....|....*...
gi 530368610 783 GPGEREPrkePRTAEKRPLRRGAEKSLPPAATGPGADG 820
Cdd:PRK07764 762 PAPAPAA---APAAAPPPSPPSEEEEMAEDDAPSMDDE 796
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
397-621 |
3.13e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.40 E-value: 3.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 397 DVASPFPTAIPEGDTTPPETDPAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGTEP 476
Cdd:PRK12323 371 GAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAP 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 477 ER--IGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAER 554
Cdd:PRK12323 451 APapAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPA 530
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 530368610 555 AAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARSGpvWRSEAALDDLQGLPE 621
Cdd:PRK12323 531 TADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGD--WPALAARLPVRGLAQ 595
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
470-680 |
5.53e-03 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 40.66 E-value: 5.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 470 RGAGTEPERIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPP 549
Cdd:PRK12678 59 RGGGAAAAAATPAAPAAAARRAARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAAR 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 550 AGAERAAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARSgpvwRSEAALDDLQGLPEPQHAKPGP 629
Cdd:PRK12678 139 RGAARKAGEGGEQPATEARADAAERTEEEERDERRRRGDREDRQAEAERGERGR----REERGRDGDDRDRRDRREQGDR 214
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 530368610 630 RKlaERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEDRN 680
Cdd:PRK12678 215 RE--ERGRRDGGDRRGRRRRRDRRDARGDDNREDRGDRDGDDGEGRGGRRG 263
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
499-607 |
6.46e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.47 E-value: 6.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530368610 499 KHRPAAASEGPAASPPLAAAESPPVEPgpgsldaEAAAPERPKAERAEAPPAGAERAAPERKAERGGAELRGAKKFSVSS 578
Cdd:PRK14951 391 AAPVAQAAAAPAPAAAPAAAASAPAAP-------PAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETVAIP 463
|
90 100 110
....*....|....*....|....*....|....
gi 530368610 579 CRARPRPGVSRPLERASG-----RLPLARSGPVW 607
Cdd:PRK14951 464 VRVAPEPAVASAAPAPAAapaaaRLTPTEEGDVW 497
|
|
| |
