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Conserved domains on  [gi|530402800|ref|XP_005266653|]
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epithelial-stromal interaction protein 1 isoform X1 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF5401 super family cl38662
Family of unknown function (DUF5401); This is a family of unknown function found in ...
 75-272 1.95e-06

Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.


The actual alignment was detected with superfamily member pfam17380:

Pssm-ID: 375164 [Multi-domain]  Cd Length: 722  Bit Score: 50.12  E-value: 1.95e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800   75 NRRNEIQRIAEQELA-NLEKWKEQNRAKPVHlvPRRLGGSQSETEVRQKQQLQLMQSKYKQKLKREESVRIKKEAEEAEL 153
Cdd:pfam17380 357 ERKRELERIRQEEIAmEISRMRELERLQMER--QQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQ 434

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800  154 QKMKAIQREKSNKLEeKKRLQENLRREAFREHQQYKTAEFLSKLNTESPDRSACQSAVCGPQSSTWARSWAYRDSLKAEE 233
Cdd:pfam17380 435 REVRRLEEERAREME-RVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEER 513

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 530402800  234 NRKLQKMKDEQHQKSELLELKRQQQEQERAKIHQTEHRR 272
Cdd:pfam17380 514 KRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEERR 552
 
Name Accession Description Interval E-value
DUF5401 pfam17380
Family of unknown function (DUF5401); This is a family of unknown function found in ...
 75-272 1.95e-06

Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.


Pssm-ID: 375164 [Multi-domain]  Cd Length: 722  Bit Score: 50.12  E-value: 1.95e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800   75 NRRNEIQRIAEQELA-NLEKWKEQNRAKPVHlvPRRLGGSQSETEVRQKQQLQLMQSKYKQKLKREESVRIKKEAEEAEL 153
Cdd:pfam17380 357 ERKRELERIRQEEIAmEISRMRELERLQMER--QQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQ 434

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800  154 QKMKAIQREKSNKLEeKKRLQENLRREAFREHQQYKTAEFLSKLNTESPDRSACQSAVCGPQSSTWARSWAYRDSLKAEE 233
Cdd:pfam17380 435 REVRRLEEERAREME-RVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEER 513

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 530402800  234 NRKLQKMKDEQHQKSELLELKRQQQEQERAKIHQTEHRR 272
Cdd:pfam17380 514 KRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEERR 552
PTZ00121 PTZ00121
MAEBL; Provisional
 76-264 4.40e-04

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 42.82  E-value: 4.40e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800   76 RRNEIQRIAEqELANLEKWKEQNRAKPVHLVPRRLGGSQSETEvRQKQQLQLMQSKYKQKLKREESVRIKKEAEEAELQK 155
Cdd:PTZ00121 1284 KKAEEKKKAD-EAKKAEEKKKADEAKKKAEEAKKADEAKKKAE-EAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEA 1361

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800  156 MKAIQREKSNKLEEKKRLQENLRREAfrehQQYKTAEFLSKlNTESPDRSACQSavcgpQSSTWARSWAYRDSLKAEENR 235
Cdd:PTZ00121 1362 AEEKAEAAEKKKEEAKKKADAAKKKA----EEKKKADEAKK-KAEEDKKKADEL-----KKAAAAKKKADEAKKKAEEKK 1431

                         170       180
                  ....*....|....*....|....*....
gi 530402800  236 KLQKMKDEQHQKSELLELKRQQQEQERAK 264
Cdd:PTZ00121 1432 KADEAKKKAEEAKKADEAKKKAEEAKKAE 1460
YqiK COG2268
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown];
60-187 7.01e-03

Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown];


Pssm-ID: 441869 [Multi-domain]  Cd Length: 439  Bit Score: 38.32  E-value: 7.01e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800  60 GQRRTSAytLIAPNINRRNEIQRIAEQELAnlekwkEQNRAkpvhlvprrlggsQSETEVRQKQQLQLMQSKYKQKLKRE 139
Cdd:COG2268  190 GRRKIAE--IIRDARIAEAEAERETEIAIA------QANRE-------------AEEAELEQEREIETARIAEAEAELAK 248

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 530402800 140 ESVRIKKEAEEAELQKMKAIQREKSNKLEEKKRLQENLRREAFREHQQ 187
Cdd:COG2268  249 KKAEERREAETARAEAEAAYEIAEANAEREVQRQLEIAEREREIELQE 296
 
Name Accession Description Interval E-value
DUF5401 pfam17380
Family of unknown function (DUF5401); This is a family of unknown function found in ...
 75-272 1.95e-06

Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.


Pssm-ID: 375164 [Multi-domain]  Cd Length: 722  Bit Score: 50.12  E-value: 1.95e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800   75 NRRNEIQRIAEQELA-NLEKWKEQNRAKPVHlvPRRLGGSQSETEVRQKQQLQLMQSKYKQKLKREESVRIKKEAEEAEL 153
Cdd:pfam17380 357 ERKRELERIRQEEIAmEISRMRELERLQMER--QQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQ 434

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800  154 QKMKAIQREKSNKLEeKKRLQENLRREAFREHQQYKTAEFLSKLNTESPDRSACQSAVCGPQSSTWARSWAYRDSLKAEE 233
Cdd:pfam17380 435 REVRRLEEERAREME-RVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEER 513

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 530402800  234 NRKLQKMKDEQHQKSELLELKRQQQEQERAKIHQTEHRR 272
Cdd:pfam17380 514 KRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEERR 552
PTZ00121 PTZ00121
MAEBL; Provisional
 76-264 4.40e-04

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 42.82  E-value: 4.40e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800   76 RRNEIQRIAEqELANLEKWKEQNRAKPVHLVPRRLGGSQSETEvRQKQQLQLMQSKYKQKLKREESVRIKKEAEEAELQK 155
Cdd:PTZ00121 1284 KKAEEKKKAD-EAKKAEEKKKADEAKKKAEEAKKADEAKKKAE-EAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEA 1361

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800  156 MKAIQREKSNKLEEKKRLQENLRREAfrehQQYKTAEFLSKlNTESPDRSACQSavcgpQSSTWARSWAYRDSLKAEENR 235
Cdd:PTZ00121 1362 AEEKAEAAEKKKEEAKKKADAAKKKA----EEKKKADEAKK-KAEEDKKKADEL-----KKAAAAKKKADEAKKKAEEKK 1431

                         170       180
                  ....*....|....*....|....*....
gi 530402800  236 KLQKMKDEQHQKSELLELKRQQQEQERAK 264
Cdd:PTZ00121 1432 KADEAKKKAEEAKKADEAKKKAEEAKKAE 1460
Borrelia_P83 pfam05262
Borrelia P83/100 protein; This family consists of several Borrelia P83/P100 antigen proteins.
 80-264 5.39e-04

Borrelia P83/100 protein; This family consists of several Borrelia P83/P100 antigen proteins.


Pssm-ID: 114011 [Multi-domain]  Cd Length: 489  Bit Score: 41.91  E-value: 5.39e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800   80 IQRIAEQELANLEKWKEQNRAKPVHlvpRRLGGSQSETEVRQKQQLQLMQSKYKQKLKREESV--RIKKEAEEAELQKMK 157
Cdd:pfam05262 183 VEALREDNEKGVNFRRDMTDLKERE---SQEDAKRAQQLKEELDKKQIDADKAQQKADFAQDNadKQRDEVRQKQQEAKN 259

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800  158 AIQREKSNKLEEKKRLQENLRREAFREHQQYKTAEFLSKLNTESPDRSACQSAvcgpqsstwarswayrdslKAEENRKL 237
Cdd:pfam05262 260 LPKPADTSSPKEDKQVAENQKREIEKAQIEIKKNDEEALKAKDHKAFDLKQES-------------------KASEKEAE 320

                         170       180
                  ....*....|....*....|....*..
gi 530402800  238 QKMKDEQHQKSELLELKRQQQEQERAK 264
Cdd:pfam05262 321 DKELEAQKKREPVAEDLQKTKPQVEAQ 347
PTZ00121 PTZ00121
MAEBL; Provisional
 30-262 6.84e-04

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 42.05  E-value: 6.84e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800   30 RQGELSPVEDQREGLEAAPKGPSR---ESVVHAGQRRTSAYTLIAPNiNRRNEIQRIAEQElanlEKWKEQNRAKPVhlv 106
Cdd:PTZ00121 1104 KKTETGKAEEARKAEEAKKKAEDArkaEEARKAEDARKAEEARKAED-AKRVEIARKAEDA----RKAEEARKAEDA--- 1175

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800  107 pRRLGGSQSETEVRQKQQLQLMQSKYK-QKLKREESVRIKKEAEEAE-LQKMKAIQR--EKSNKLEEKKRLQENLRREAF 182
Cdd:PTZ00121 1176 -KKAEAARKAEEVRKAEELRKAEDARKaEAARKAEEERKAEEARKAEdAKKAEAVKKaeEAKKDAEEAKKAEEERNNEEI 1254

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800  183 REHQQYKTAEFLSKLNTESPDRSACQSAVCGPQSSTWArswayRDSLKAEENRKLQKMKDEQHQKSELLELKRQQQEQER 262
Cdd:PTZ00121 1255 RKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKA-----DEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKK 1329
PTZ00121 PTZ00121
MAEBL; Provisional
 76-269 9.40e-04

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 41.67  E-value: 9.40e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800   76 RRNEIQRIAEQELAnlekwKEQNRAKPVHLVPRRLGGSQSETEVRQKQQLQLMQSKYKQKLKREESVRIKKEAEEAELQK 155
Cdd:PTZ00121 1613 KKAEEAKIKAEELK-----KAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDE 1687

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800  156 MKAIQREKsNKLEEKKRLQENLRREA--FREHQQYKTAEFLSKLNTESPDRSAcqsavcgpqsstwarswayrdslkAEE 233
Cdd:PTZ00121 1688 KKAAEALK-KEAEEAKKAEELKKKEAeeKKKAEELKKAEEENKIKAEEAKKEA------------------------EED 1742

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 530402800  234 NRKLQKMKDEQHQKSELLELKRQQQEQERAKIHQTE 269
Cdd:PTZ00121 1743 KKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKE 1778
DUF3584 pfam12128
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ...
 90-294 2.42e-03

Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.


Pssm-ID: 432349 [Multi-domain]  Cd Length: 1191  Bit Score: 40.21  E-value: 2.42e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800    90 NLEKWKEQNRAKPVHLVPRRLGGSQSETEVRQKQQLQLMQSKYKQKLKREESVRIKKEAEEAELQKMKAIQREKSNKL-- 167
Cdd:pfam12128  654 DLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQVVEGALDAQLal 733

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800   168 --EEKKRLQENLRREAFREHQQYKT--------AEFLSKLNTESPD--RSACQSAVCGPQSSTWaRSWAYRDSLKAEENR 235
Cdd:pfam12128  734 lkAAIAARRSGAKAELKALETWYKRdlaslgvdPDVIAKLKREIRTleRKIERIAVRRQEVLRY-FDWYQETWLQRRPRL 812

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 530402800   236 KLQKMKDEQHQKSELLELKRQQQEQERAKIHQTEHRRVNNAFLDRLQGKSQPGGLEQSG 294
Cdd:pfam12128  813 ATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSK 871
PTZ00121 PTZ00121
MAEBL; Provisional
 76-267 2.81e-03

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 40.12  E-value: 2.81e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800   76 RRNEIQRIAEQelanLEKWKEQNRAKPVHLVP-RRLGGSQSETEVRQKQQLQLMQSKYKQKLKREESVRIKKEAEEAELQ 154
Cdd:PTZ00121 1540 KKAEEKKKADE----LKKAEELKKAEEKKKAEeAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKA 1615

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800  155 KMKAIQREKSNKLEEKKRLQENLRR---EAFREHQQYKTAEFLSKLNTESPDRSACQ---SAVCGPQSSTWARSWAYRDS 228
Cdd:PTZ00121 1616 EEAKIKAEELKKAEEEKKKVEQLKKkeaEEKKKAEELKKAEEENKIKAAEEAKKAEEdkkKAEEAKKAEEDEKKAAEALK 1695

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 530402800  229 LKAEENRKLQKMKDEQHQKSELLELKRQQQEQERAKIHQ 267
Cdd:PTZ00121 1696 KEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEE 1734
PTZ00121 PTZ00121
MAEBL; Provisional
 76-280 3.63e-03

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 39.74  E-value: 3.63e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800   76 RRNEIQRIAEQ-------ELANLEKWKEQNRAKPVHLVPRRLGGSQSETEVRQK-QQLQLMQSKYKQKL----KREESVR 143
Cdd:PTZ00121 1581 RKAEEAKKAEEarieevmKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKvEQLKKKEAEEKKKAeelkKAEEENK 1660

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800  144 IKKE--AEEAELQKMKAIQREKSNklEEKKRLQENLRREAfrehQQYKTAEFLSKLNTESPDRSacqsavcgpqsstwar 221
Cdd:PTZ00121 1661 IKAAeeAKKAEEDKKKAEEAKKAE--EDEKKAAEALKKEA----EEAKKAEELKKKEAEEKKKA---------------- 1718

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 530402800  222 swayRDSLKAEENRKL---QKMKDEQHQKSELLELKRqqQEQERAKIHQTEHRRVNNAFLDR 280
Cdd:PTZ00121 1719 ----EELKKAEEENKIkaeEAKKEAEEDKKKAEEAKK--DEEEKKKIAHLKKEEEKKAEEIR 1774
PTZ00121 PTZ00121
MAEBL; Provisional
 71-272 4.74e-03

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 39.35  E-value: 4.74e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800   71 APNINRRNEIQRIAEQELANLEKWKEQNRAKPVHLVPRRLGGSQSETEVRQKQQLQLMQSKYKQKlkREESVRIKKEAEE 150
Cdd:PTZ00121 1427 AEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKK--AEEAKKKADEAKK 1504

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800  151 AELQKMKAiqrEKSNKLEEKKRLQENLRREAFREHQQYKTAEFLSKLN----TESPDRSACQSAVCGPQSSTWARSWAYR 226
Cdd:PTZ00121 1505 AAEAKKKA---DEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADelkkAEELKKAEEKKKAEEAKKAEEDKNMALR 1581

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 530402800  227 dslKAEENRKLQKMKDEQHQKSELLELKRQQQE---QERAKIHQTEHRR 272
Cdd:PTZ00121 1582 ---KAEEAKKAEEARIEEVMKLYEEEKKMKAEEakkAEEAKIKAEELKK 1627
DUF4670 pfam15709
Domain of unknown function (DUF4670); This family of proteins is found in eukaryotes. Proteins ...
 108-272 4.90e-03

Domain of unknown function (DUF4670); This family of proteins is found in eukaryotes. Proteins in this family are typically between 373 and 763 amino acids in length.


Pssm-ID: 464815 [Multi-domain]  Cd Length: 522  Bit Score: 39.16  E-value: 4.90e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800  108 RRLGGSQSETEVRQKQQLQLMQSKykqklkREESVRIKKEAEEAELQKMKAIQREKSNKLE---EKKRLQENLRREAFRE 184
Cdd:pfam15709 361 RRLQQEQLERAEKMREELELEQQR------RFEEIRLRKQRLEEERQRQEEEERKQRLQLQaaqERARQQQEEFRRKLQE 434

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800  185 HQQYKTAEFLSKLNTESPDRSACQSAVcgpqsstwarswayrdslkAEENRKLQKMKDEqhqksELLELKRQQQEQERAK 264
Cdd:pfam15709 435 LQRKKQQEEAERAEAEKQRQKELEMQL-------------------AEEQKRLMEMAEE-----ERLEYQRQKQEAEEKA 490


                  ....*...
gi 530402800  265 IHQTEHRR 272
Cdd:pfam15709 491 RLEAEERR 498
YqiK COG2268
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown];
60-187 7.01e-03

Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown];


Pssm-ID: 441869 [Multi-domain]  Cd Length: 439  Bit Score: 38.32  E-value: 7.01e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800  60 GQRRTSAytLIAPNINRRNEIQRIAEQELAnlekwkEQNRAkpvhlvprrlggsQSETEVRQKQQLQLMQSKYKQKLKRE 139
Cdd:COG2268  190 GRRKIAE--IIRDARIAEAEAERETEIAIA------QANRE-------------AEEAELEQEREIETARIAEAEAELAK 248

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 530402800 140 ESVRIKKEAEEAELQKMKAIQREKSNKLEEKKRLQENLRREAFREHQQ 187
Cdd:COG2268  249 KKAEERREAETARAEAEAAYEIAEANAEREVQRQLEIAEREREIELQE 296
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
 74-292 7.06e-03

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 38.76  E-value: 7.06e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800  74 INRRNEIQRIAEQELANLEKWKEQNRAkpvhlvprrlggsQSETEVRQKQQLQLMQSKYKQKLKREESVRIKKEAEEAEL 153
Cdd:COG1196  283 LEEAQAEEYELLAELARLEQDIARLEE-------------RRRELEERLEELEEELAELEEELEELEEELEELEEELEEA 349

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800 154 QKMKAIQREKSNKLEEKKRLQENLRREAFREHQQyKTAEFLSKLNTESPDRSACQSAvcgpqsstwARSWAYRDSLKAEE 233
Cdd:COG1196  350 EEELEEAEAELAEAEEALLEAEAELAEAEEELEE-LAEELLEALRAAAELAAQLEEL---------EEAEEALLERLERL 419

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 530402800 234 NRKLQKMKDEQHQKSELLELKRQQQEQERAKIHQTEHRRVNNAFLDRLQGKSQPGGLEQ 292
Cdd:COG1196  420 EEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAA 478
Caldesmon pfam02029
Caldesmon;
96-204 7.28e-03

Caldesmon;


Pssm-ID: 460421 [Multi-domain]  Cd Length: 495  Bit Score: 38.31  E-value: 7.28e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530402800   96 EQNRAKPVHLVPRRLGGSQSETEVRQKQQLQLMQSKYKQKLKREesvriKKEAEEAELQKMKAIQREKSNKLEEKKRLQE 175
Cdd:pfam02029 213 EEEVTKLKVTTKRRQGGLSQSQEREEEAEVFLEAEQKLEELRRR-----RQEKESEEFEKLRQKQQEAELELEELKKKRE 287

                          90       100
                  ....*....|....*....|....*....
gi 530402800  176 NLRREAFREHQQYKTAEFLSKLNTESPDR 204
Cdd:pfam02029 288 ERRKLLEEEEQRRKQEEAERKLREEEEKR 316
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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