|
Name |
Accession |
Description |
Interval |
E-value |
| BAT2_N |
pfam07001 |
BAT2 N-terminus; This family represents the N-terminus (approximately 200 residues) of the ... |
2-160 |
4.44e-48 |
|
BAT2 N-terminus; This family represents the N-terminus (approximately 200 residues) of the proline-rich protein BAT2. BAT2 is similar to other proteins with large proline-rich domains, such as some nuclear proteins, collagens, elastin, and synapsin.
Pssm-ID: 462063 [Multi-domain] Cd Length: 190 Bit Score: 170.82 E-value: 4.44e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 2 SEKSGQSTKAKDGK-KYATLSLFNTYKGKSLETQKTTA----RHGLQSLGKVGISRRmpPPANLPSLKAENKGNDPNVNI 76
Cdd:pfam07001 1 SSTLGQSRKEKDGKpKYTALDINRTYKGESLEPSKQKNvvprKHGMQSLGKVPSARR--PPANLPSLKAENKGNDPNVSL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 77 VPKDGTGWASKQEQHEEEK--------------------APEVSPAQPKPGVAAPPEVAPAPKSW--ASNKQGGQGDGI- 133
Cdd:pfam07001 79 VPKDGSGWASKQETPSPKSsqalaavqpeaqqppgsgtsGSNTSPGNPTAHEGPAGTSAAGGKSWaqASTTAGSQGGGGk 158
|
170 180 190
....*....|....*....|....*....|
gi 568910698 134 ---QVNSQFQQEFPSLQAAGDQEKKEKEAN 160
Cdd:pfam07001 159 gsnQLSPFSQEEFPTLQAAGDQDKSGKENN 188
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1705-1977 |
5.40e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 59.18 E-value: 5.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1705 ATGTQQIQAPPSAPVPVSSSAPGLTAPAAAAPASTPAPVPILASATALVPVSTPAPVLTSCP----------APVPTSAS 1774
Cdd:PHA03247 2726 AAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAvaslsesresLPSPWDPA 2805
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1775 APVPASTSSPVTASSSSQPSVPAPTPvlasastTVSVPILTSASIPILASALAPATVSSPTPVVS--ATAVPSISTPAVP 1852
Cdd:PHA03247 2806 DPPAAVLAPAAALPPAASPAGPLPPP-------TSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRrrPPSRSPAAKPAAP 2878
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1853 ASAPTASVPlAPASAASTVP---PPASTVQTQTQTQTHKPVQSPLPPSAPSSKQPPPSIRLPSAQTSNGTDfvAAGKSMP 1929
Cdd:PHA03247 2879 ARPPVRRLA-RPAVSRSTESfalPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTD--PAGAGEP 2955
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 568910698 1930 TSQSHGSLTAELWDSKVAAPAVLNDISKKLGPISPPQPPS--------VSAWNKPL 1977
Cdd:PHA03247 2956 SGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPltghslsrVSSWASSL 3011
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1751-1982 |
5.37e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 55.27 E-value: 5.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1751 ALVPVSTPAPVLTSCPAPVPTSASAPVPASTSspvtassssqPSVPAPTPVLASASTTVSvPILTSASIPILASALAPAT 1830
Cdd:PRK12323 378 AAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAA----------PAAAAAARAVAAAPARRS-PAPEALAAARQASARGPGG 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1831 VSSPTPvvSATAVPsistpaVPASAPTASVPLAPASAASTVPPPASTVQTQTQTQTHKPVQSPLPpsapsskqPPPSIRL 1910
Cdd:PRK12323 447 APAPAP--APAAAP------AAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELP--------PEFASPA 510
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568910698 1911 PSAQTSNGTDFVAAGKSMPTSQSHGSLTAELWDSKVAAPAVLNDISkkLGPISPPQPPSVSAWNKPLTSFGS 1982
Cdd:PRK12323 511 PAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAA--TEPVVAPRPPRASASGLPDMFDGD 580
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
1713-1877 |
8.17e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 54.86 E-value: 8.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1713 APPSAPVPVSSSAPGLTAPAAAAPASTPAPVPILASATALVPVSTPAPVLTSCPAPVPTSASAPVPASTSSPVTASSSSQ 1792
Cdd:PRK07003 367 APGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGD 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1793 PSVPAPTPVLASASTTVSVPILTSASIPILASALAPAT-------VSSPTPVVSATAVPSISTPAVPASAPTASVPLAPA 1865
Cdd:PRK07003 447 APVPAKANARASADSRCDERDAQPPADSGSASAPASDAppdaafePAPRAAAPSAATPAAVPDARAPAAASREDAPAAAA 526
|
170
....*....|..
gi 568910698 1866 SAASTVPPPAST 1877
Cdd:PRK07003 527 PPAPEARPPTPA 538
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1714-1931 |
2.76e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.40 E-value: 2.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1714 PPSAPVPVSSSAPGLTAPAAAAPASTPAPVPILASATALVPVSTPAPVLTSCPAPV-----PTSASAPV-----PASTSS 1783
Cdd:PHA03247 2612 APPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRArrlgrAAQASSPPqrprrRAARPT 2691
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1784 PVTASSSSQPSVPAPTPVLASASTTVSVPILTSasiPILASALAPATVSSPTPVVSATAVPSISTPAVPASAPTASVPLA 1863
Cdd:PHA03247 2692 VGSLTSLADPPPPPPTPEPAPHALVSATPLPPG---PAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPA 2768
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1864 PASAA--STVPPPASTVQTQTQTQTHKPvqsplPPSAPSSKQPPPSIRLPSAQTSNGTDFVAAGKSMPTS 1931
Cdd:PHA03247 2769 PAPPAapAAGPPRRLTRPAVASLSESRE-----SLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTS 2833
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
1747-1874 |
9.92e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 51.25 E-value: 9.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1747 ASATALVPVSTPAPVltscPAPVPTSASAPVPASTSSPVTASSSSQPSVPAPTPVLASASTtvsVPILTSASIPilaSAL 1826
Cdd:PRK14951 376 AEKKTPARPEAAAPA----AAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAA---APAAAPAAAP---AAV 445
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 568910698 1827 APATVSSPTPVVSATAVPSISTPAVPASAPTASVPLAPASAASTVPPP 1874
Cdd:PRK14951 446 ALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
1747-1878 |
1.56e-05 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 50.52 E-value: 1.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1747 ASATALVPVSTPAPVLTSCPAPVPTSASAPVPASTSSPVTASSSSQPSVPAPTPVlASASTTVSVPILTSASIPILASA- 1825
Cdd:COG3469 69 TAATSSTTSTTATATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVT-STTSSTAGSTTTSGASATSSAGSt 147
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568910698 1826 ---------LAPATVSSPTPVVSATAVPSISTPAVPASAPTASVPLAPASA---ASTVPPPASTV 1878
Cdd:COG3469 148 tttttvsgtETATGGTTTTSTTTTTTSASTTPSATTTATATTASGATTPSAtttATTTGPPTPGL 212
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
1816-1946 |
3.32e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 49.33 E-value: 3.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1816 SASIPILASALAPATVSSPTPvvSATAVPSISTPAVPASAPTASVPLAPASAASTVPPPASTVQTQTQTQTHKPVQSPLP 1895
Cdd:PRK14951 369 AAEAAAPAEKKTPARPEAAAP--AAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVA 446
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 568910698 1896 PSAPSSKQPPPSIRLPSAQTSNGTDF-VAAGKSMPTSQSHGSLTAEL---WDSKV 1946
Cdd:PRK14951 447 LAPAPPAQAAPETVAIPVRVAPEPAVaSAAPAPAAAPAAARLTPTEEgdvWHATV 501
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
1793-1907 |
4.11e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 49.33 E-value: 4.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1793 PSVPAPTPVLASASTTVSVPILTSASIPILASALAPATVSSPTPVVSATAVPSISTPAVPASAPTASVPL-APASAASTV 1871
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAaAPAAAPAAV 445
|
90 100 110
....*....|....*....|....*....|....*.
gi 568910698 1872 PPPASTVQTQTQTQTHKPVQSPLPPSAPSSKQPPPS 1907
Cdd:PRK14951 446 ALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAA 481
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1697-1873 |
1.48e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 47.56 E-value: 1.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1697 PPRFAKKQATGTQQIQAPPSAPVPVS-----SSAPGLTAPAAAAPASTPAPVPILASATALVPVSTPAPVLTSCPAPVPT 1771
Cdd:PRK12323 396 APAPAAPPAAPAAAPAAAAAARAVAAaparrSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAA 475
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1772 SASAPVPASTSSPVTASSSSQP-------SVPAPTPVLASASTTVSVpiltSASIPILASALAPATVSSPTPVVSATAVP 1844
Cdd:PRK12323 476 AAAAPARAAPAAAPAPADDDPPpweelppEFASPAPAQPDAAPAGWV----AESIPDPATADPDDAFETLAPAPAAAPAP 551
|
170 180
....*....|....*....|....*....
gi 568910698 1845 SISTPAVPASAPTasvplAPASAASTVPP 1873
Cdd:PRK12323 552 RAAAATEPVVAPR-----PPRASASGLPD 575
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
1792-1913 |
1.68e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 47.02 E-value: 1.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1792 QPSVPAPTPVLASASTTVSVPILTSASIPilASALAPATVSSPtPVVSATAVPSISTPAVPASAPTASVPLAPASAASTV 1871
Cdd:PRK14951 373 AAPAEKKTPARPEAAAPAAAPVAQAAAAP--APAAAPAAAASA-PAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAP 449
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 568910698 1872 PPPASTVQTQTQTQTHKPVQSPLPPSAPSSKQPPPSIRLPSA 1913
Cdd:PRK14951 450 APPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPT 491
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
1767-2052 |
3.29e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 46.38 E-value: 3.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1767 APVPTSASAPVPAStsspvtassssQPSVPAPTPVLASASTTVSVPILTSASIPILASALAPATVSSPTPVVSATAVPSI 1846
Cdd:PRK07003 359 EPAVTGGGAPGGGV-----------PARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPP 427
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1847 STPAVPASAPTASVPLAPASAASTVPPPASTVQTQTQTQTHKPVQSPLPPSAPSSKQPPPSIRLPSAQTSNGTDFVAAGK 1926
Cdd:PRK07003 428 AAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAV 507
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1927 SMPTSQSHGSLTAELWDSKVAAPAVlndiskklgpiSPPQPPSVSAwnkPLTSFGSATSSEGTRNgqeSGVEIGIDTIQF 2006
Cdd:PRK07003 508 PDARAPAAASREDAPAAAAPPAPEA-----------RPPTPAAAAP---AARAGGAAAALDVLRN---AGMRVSSDRGAR 570
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 568910698 2007 GAPASNgnenevvPVLSEKATDKVPEPKEQRQ-KQPRAGPIKAQKLP 2052
Cdd:PRK07003 571 AAAAAK-------PAAAPAAAPKPAAPRVAVQvPTPRARAATGDAPP 610
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
1755-1877 |
3.61e-04 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 46.06 E-value: 3.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1755 VSTPAPVLTSCPAPVPTSASAPVPASTSSPVTASSSSQPSVPAPTPVLASASTTVSVPIlTSASIPILASALAPATVSSP 1834
Cdd:pfam05109 473 VTSPTPAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPT-PNATSPTLGKTSPTSAVTTP 551
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 568910698 1835 TPVVSAtavpsiSTPAVPASAPTASVP----LAPASAASTVPPPAST 1877
Cdd:pfam05109 552 TPNATS------PTPAVTTPTPNATIPtlgkTSPTSAVTTPTPNATS 592
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
1715-1875 |
5.59e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 45.63 E-value: 5.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1715 PSAPVPVSSSAPGLTAPAAAAPASTPAPVPILASATALVP-VSTPAPVltscPAPVPTSASAPVPASTSSPVTASSSSQP 1793
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPpPPASAPQ----QAPAVPLPETTSQLLAARQQLQRAQGAT 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1794 SVPAPTPVLASASTTVSVPILTSASIPILASALAPATVSSPTPVVSATAVPsiSTPAVPASAPTAsvpLAPASAASTVPP 1873
Cdd:PRK07994 437 KAKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPV--EVKKEPVATPKA---LKKALEHEKTPE 511
|
..
gi 568910698 1874 PA 1875
Cdd:PRK07994 512 LA 513
|
|
| PPE |
COG5651 |
PPE-repeat protein [Function unknown]; |
1747-1985 |
1.06e-03 |
|
PPE-repeat protein [Function unknown];
Pssm-ID: 444372 [Multi-domain] Cd Length: 385 Bit Score: 44.11 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1747 ASATALVPVSTPAPVLTScPAPVPTSASAPVPASTSSPVTASSSSQPSVPAPTPVLASASTTVSvpiLTSASIPILASAL 1826
Cdd:COG5651 159 AAAVALTPFTQPPPTITN-PGGLLGAQNAGSGNTSSNPGFANLGLTGLNQVGIGGLNSGSGPIG---LNSGPGNTGFAGT 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1827 APATVSSPTPVVSATAVPSISTPAVPASAPTASVPLAPASAASTVPPPASTVQTQTQTQTHKPVQSPLPPSAPSSKQPPP 1906
Cdd:COG5651 235 GAAAGAAAAAAAAAAAAGAGASAALASLAATLLNASSLGLAATAASSAATNLGLAGSPLGLAGGGAGAAAATGLGLGAGG 314
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568910698 1907 SIRLPSAQTSNGTDFVAAGKSMPTSQSHGSLTaelwdskvAAPAVLNDISKKLGPISPPQPPSVSAWNKPLTSFGSATS 1985
Cdd:COG5651 315 AAGAAGATGAGAALGAGAAAAAAGAAAGAGAA--------AAAAAGGAGGGGGGALGAGGGGGSAGAAAGAASGGGAAA 385
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
1792-1877 |
1.07e-03 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 43.86 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1792 QPSVPAPTPVLASASTTVSVPILTSAsipilASALAPATVSSPTPVVSATAVPSISTPAVPASAPTASVPLaPASAASTV 1871
Cdd:PRK10856 172 PATTPAPAAPVDTTPTNSQTPAVATA-----PAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPL-PTDQAGVS 245
|
....*.
gi 568910698 1872 PPPAST 1877
Cdd:PRK10856 246 TPAADP 251
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1697-1988 |
1.23e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.78 E-value: 1.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1697 PPRFAKKQATGTQQIQAPPSAPVPVSSSAPGLTAPAAAAPASTPAPVPILASATALVPVSTPAPVLTSCPA-PVPTSASA 1775
Cdd:PHA03307 54 TVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPAsPPPSPAPD 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1776 PVPASTSSPVTASSSSQPSVPAPTPVLASASTTVSvpiltsasiPILASALAPATVSSPTPVVSATAVPSISTPAvPASA 1855
Cdd:PHA03307 134 LSEMLRPVGSPGPPPAASPPAAGASPAAVASDAAS---------SRQAALPLSSPEETARAPSSPPAEPPPSTPP-AAAS 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1856 PTASVPLAPASAASTVPPPAST----VQTQTQTQTHKPVQSPLPPSAPSSKQPPPSIRLPSAQTSNGTDFVAAGKSmPTS 1931
Cdd:PHA03307 204 PRPPRRSSPISASASSPAPAPGrsaaDDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPS-SRP 282
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 568910698 1932 QSHGSLTAELWDSKVAAPavlndiSKKLGPISPPQPPSVSAWNKPLTSFGSATSSEG 1988
Cdd:PHA03307 283 GPASSSSSPRERSPSPSP------SSPGSGPAPSSPRASSSSSSSRESSSSSTSSSS 333
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
1697-1906 |
1.28e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.46 E-value: 1.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1697 PPRFAKKQATGTQQIQAPPSAPVPVSSSAPGLTAPAAAAPASTPAPVPI--LASATALVPVSTPAPVLTSCPAPVPTSAS 1774
Cdd:PRK07003 405 AAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKAnaRASADSRCDERDAQPPADSGSASAPASDA 484
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1775 APVPASTSSPVTASSSSQPSVPAPTPVLASASTTVSVPILTSASIPILASAlAPATVSSPTPVVSATAVPSI-------- 1846
Cdd:PRK07003 485 PPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPP-TPAAAAPAARAGGAAAALDVlrnagmrv 563
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568910698 1847 ----STPAVPASAPTASVPLAPASAASTVPPPASTVQTQTQTQTHKPVQSPLPPSAPSSKQPPP 1906
Cdd:PRK07003 564 ssdrGARAAAAAKPAAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQAAESRGAPP 627
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1758-2148 |
1.98e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.16 E-value: 1.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1758 PAPVLTSCPAPVPTSASAPVPASTSSpvtassssqPSVPAPTPVLASASTTVSVPILTSA-SIPILASA--------LAP 1828
Cdd:PHA03247 2619 PDTHAPDPPPPSPSPAANEPDPHPPP---------TVPPPERPRDDPAPGRVSRPRRARRlGRAAQASSppqrprrrAAR 2689
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1829 ATVSSPTPVVSATAVPSISTPAVPASAPTASVPLAPASAASTVP-PPASTVQTQTQTQTHKPVQSPLPPSAPSSKQPP-P 1906
Cdd:PHA03247 2690 PTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPaLPAAPAPPAVPAGPATPGGPARPARPPTTAGPPaP 2769
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1907 SIRLPSAQTSNGTDFVAAGKSMPTSQSHGSLTAELWDSKVAAPAVLNDISKKLGPISPPQPPSVSAWNKPLTSFGSATSS 1986
Cdd:PHA03247 2770 APPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPS 2849
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1987 EGTrngqESGVEIGIDTIQFGAPASNGnenEVVPVLSEKATDKVPEPKEQRQKQPRAGPIKAQKLPdlslvenkeHKPGP 2066
Cdd:PHA03247 2850 LPL----GGSVAPGGDVRRRPPSRSPA---AKPAAPARPPVRRLARPAVSRSTESFALPPDQPERP---------PQPQA 2913
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 2067 IGKERSLKNRKVKDAQQVEPEGQEKPSPAVVRSTDPETAKETKAVSEmSAEIGAMISVSSAEYGSDAKESVTDYTTPSSS 2146
Cdd:PHA03247 2914 PPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVP-QPWLGALVPGRVAVPRFRVPQPAPSREAPASS 2992
|
..
gi 568910698 2147 LP 2148
Cdd:PHA03247 2993 TP 2994
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1697-1875 |
3.02e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 42.94 E-value: 3.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1697 PPRFAkkqATGTQQIQAPPSAPVPVSSSAPGLTAPAAAAPASTPAPVPILASATALVPVSTPAPVLTSCPAPVPTSASAP 1776
Cdd:PRK12323 374 PATAA---AAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAP 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1777 VPASTSSPVTASSSSQPSvPAPTPVLASASTTVSVPILTSASIPILASAL--APATVSSPTPVVSATAVPSISTPAVP-- 1852
Cdd:PRK12323 451 APAPAAAPAAAARPAAAG-PRPVAAAAAAAPARAAPAAAPAPADDDPPPWeeLPPEFASPAPAQPDAAPAGWVAESIPdp 529
|
170 180
....*....|....*....|....*
gi 568910698 1853 --ASAPTASVPLAPASAASTVPPPA 1875
Cdd:PRK12323 530 atADPDDAFETLAPAPAAAPAPRAA 554
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1754-1875 |
4.06e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.67 E-value: 4.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1754 PVSTPAPVLTSCPAPVPTSASAPVPASTSSPVTASSSSQPSvPAPTPVLASASTTVSVPILTSASIPILASALAPATvss 1833
Cdd:PRK07764 390 GAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQ-PAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQ--- 465
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 568910698 1834 PTPVVSATAVPSISTPAVPASAPTASVPLAPASAASTVPPPA 1875
Cdd:PRK07764 466 PAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGAD 507
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
1754-1983 |
4.10e-03 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 42.72 E-value: 4.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1754 PVSTPAPVLTSCPAPVPTSASAPVPASTSSpvtassssqPSVPAPTPVLASASTTVSVPILTSASIPILASALAPATVSS 1833
Cdd:PRK10811 862 EEVQVQPVVAEVPVAAAVEPVVSAPVVEAV---------AEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTEQPQVIT 932
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1834 PTPVVSATAVPSISTPAVPASAPTASVPLAPASAASTVPPPASTVQTqtqtqthkPVQSPLPPSAPSSKQPPPSIRLPSA 1913
Cdd:PRK10811 933 ESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQP--------AAPVVAEVAAEVETVTAVEPEVAPA 1004
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568910698 1914 QTSNGTDFvaagksmptsqsHGSLTAELwdskVAAPAvlndiskklgPISPPQPPSVSAWNKPLTSF---GSA 1983
Cdd:PRK10811 1005 QVPEATVE------------HNHATAPM----TRAPA----------PEYVPEAPRHSDWQRPTFAFegkGAA 1051
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
1746-1874 |
4.39e-03 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 42.41 E-value: 4.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1746 LASATALVPVSTP-----APVLTSCPAPVPTSAS--APVPAsTSSPVTASSSSQPSVpAPTPVLASASTTVSVPILTSAS 1818
Cdd:PHA03269 17 LIIANLNTNIPIPelhtsAATQKPDPAPAPHQAAsrAPDPA-VAPTSAASRKPDLAQ-APTPAASEKFDPAPAPHQAASR 94
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 568910698 1819 IPILASALAPATVSSPTPVVSATAVPSISTPAVPASAPTASVPLAPASAASTVPPP 1874
Cdd:PHA03269 95 APDPAVAPQLAAAPKPDAAEAFTSAAQAHEAPADAGTSAASKKPDPAAHTQHSPPP 150
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
1766-1878 |
5.22e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.53 E-value: 5.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1766 PAPVPTSASAPVPASTSSPVTASSSSQPSVPAPTPVLASASTTVSVPIlTSASIPILASALAPATVSSPTPVVSATAVPS 1845
Cdd:PRK07003 373 PARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAA-TRAEAPPAAPAPPATADRGDDAADGDAPVPA 451
|
90 100 110
....*....|....*....|....*....|...
gi 568910698 1846 ISTPAVPASAPTASVPLAPASAASTVPPPASTV 1878
Cdd:PRK07003 452 KANARASADSRCDERDAQPPADSGSASAPASDA 484
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
1703-1877 |
5.42e-03 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 42.33 E-value: 5.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1703 KQATGTQQIQAPPSAPVPVSSSAPGLTAPAAaapaSTPAPVPILASATALVPVSTPAPVLTSCP---APVPTSASAPVPA 1779
Cdd:PRK10811 851 QDVQVEEQREAEEVQVQPVVAEVPVAAAVEP----VVSAPVVEAVAEVVEEPVVVAEPQPEEVVvveTTHPEVIAAPVTE 926
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1780 STSS-PVTASSSSQPSVPAPTPVLASASTTVSVPILTS------ASIPILASALAPATVSSPTPVVSATAVPSISTPAVP 1852
Cdd:PRK10811 927 QPQViTESDVAVAQEVAEHAEPVVEPQDETADIEEAAEtaevvvAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQV 1006
|
170 180 190
....*....|....*....|....*....|.
gi 568910698 1853 ASAPT----ASVPL--APASAASTVPPPAST 1877
Cdd:PRK10811 1007 PEATVehnhATAPMtrAPAPEYVPEAPRHSD 1037
|
|
| PPE |
COG5651 |
PPE-repeat protein [Function unknown]; |
1713-1877 |
6.63e-03 |
|
PPE-repeat protein [Function unknown];
Pssm-ID: 444372 [Multi-domain] Cd Length: 385 Bit Score: 41.80 E-value: 6.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1713 APPSAPVPVS-SSAPGLTAPAAAAPASTPAPVPILASATALVPVSTPAPVLTSCPAPVPTSASAPVPASTSSPVTASSSS 1791
Cdd:COG5651 165 TPFTQPPPTItNPGGLLGAQNAGSGNTSSNPGFANLGLTGLNQVGIGGLNSGSGPIGLNSGPGNTGFAGTGAAAGAAAAA 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1792 QPSVPAPTPVLASASTTVSVPILTSASIPILASALAPATVSSPTPVVSATAVPSISTPAVPASAPTASVPLAPASAASTV 1871
Cdd:COG5651 245 AAAAAAAGAGASAALASLAATLLNASSLGLAATAASSAATNLGLAGSPLGLAGGGAGAAAATGLGLGAGGAAGAAGATGA 324
|
....*.
gi 568910698 1872 PPPAST 1877
Cdd:COG5651 325 GAALGA 330
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
1771-1942 |
6.70e-03 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 41.04 E-value: 6.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1771 TSASAPVPASTSSPVTASSSSQPSVPAPTPVLASASTTVSVPILTSAsipiLASALAPATVSSPTPVVSATAVPSISTPA 1850
Cdd:PHA03255 26 SSGSSTASAGNVTGTTAVTTPSPSASGPSTNQSTTLTTTSAPITTTA----ILSTNTTTVTSTGTTVTPVPTTSNASTIN 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1851 VPASApTASVPLAPASAASTVPPPASTVQTQTQTQTHKPVQSPLPPSAPsskqPPPSirlpSAQTSNGTDFVAAGKSMPT 1930
Cdd:PHA03255 102 VTTKV-TAQNITATEAGTGTSTGVTSNVTTRSSSTTSATTRITNATTLA----PTLS----SKGTSNATKTTAELPTVPD 172
|
170
....*....|...
gi 568910698 1931 SQSHGSLTA-ELW 1942
Cdd:PHA03255 173 ERQPSLSYGlPLW 185
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
1751-1906 |
6.97e-03 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 41.95 E-value: 6.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1751 ALVPVSTPAPVLTSCPAPVPTSASAPVPASTsspvtassssqPSVPAPTPVLASASTTVSVPILTSASIPILASALAPAT 1830
Cdd:PRK10811 861 AEEVQVQPVVAEVPVAAAVEPVVSAPVVEAV-----------AEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTEQPQ 929
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568910698 1831 VSSPTPVVSATAVPSISTPAVPASAPTASVPLAPASAASTVPPPASTVQTQTQTQTHKPVQSPLPPSAPSSKQPPP 1906
Cdd:PRK10811 930 VITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQ 1005
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
1702-1840 |
7.33e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 41.62 E-value: 7.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910698 1702 KKQATGTQQIQAPPSAPVPVSssapgltapaaaapASTPAPVPILASATALVPVSTPAPVLTSCPAPVPTSASAPV--PA 1779
Cdd:PRK14951 365 KPAAAAEAAAPAEKKTPARPE--------------AAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVaaPA 430
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568910698 1780 STSSPVTASSSSQPSVPAPTPVLASASTTVSVPILTSASIPILASALAPATVSSPTPVVSA 1840
Cdd:PRK14951 431 AAAPAAAPAAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPT 491
|
|
|