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Conserved domains on  [gi|568937920|ref|XP_006504397|]
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nuclear envelope pore membrane protein POM 121 isoform X1 [Mus musculus]

Protein Classification

POM121 and PHA03247 domain-containing protein( domain architecture ID 10633598)

POM121 and PHA03247 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
POM121 pfam15229
POM121 family;
52-287 7.00e-93

POM121 family;


:

Pssm-ID: 464572 [Multi-domain]  Cd Length: 226  Bit Score: 293.49  E-value: 7.00e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920   52 KEKKKRTVAEED-QLHLDGQENKRRRHDSGGSGHSAFEPLVANGVPAAFVPKPGSLKRSLASQSSDDHLNKRSRTSSVSS 130
Cdd:pfam15229   1 KESRKRTVKDEDgQSVTEGQDSKRRRPDSSGSAQSAFRPLLANGVPSSFVPKPGPLKRGLHSKSSEDSLIKRSQTSSLSS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  131 LasactggipsSSRNAITSSYSSTRGISQLWKRSGPTSSPFSSPASSRSQTPERPAKKTREEEPCQqSSSSPPLVTDKES 210
Cdd:pfam15229  81 C----------SKRNAITSSYSSTRGFPQLQKRSGPGASPLSSPASSRSQTPQRPAKKARSEEGHS-SSSSASVKSDKEK 149

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568937920  211 PGEKVTDTTTGKQQSSWTSPPTPGSSGQRKRKIQLLPSRRGDQLTLPPPPELGYSITAEDLDMERKASLQWFNKVLE 287
Cdd:pfam15229 150 QPEKVADTPSGKKQNSRNSPPTSGSSRPRKRKIPLLPSRRGEPLTLPPPPQLGYRVTAEDLDLEKKAALQWINKVLE 226
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 182-467 3.44e-07

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 54.56  E-value: 3.44e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  182 PERPAKKTREEEPcqqssSSPPLVTDKESPGEKVTDTTTGKQQSSW---TSPPTPGSSGQRKRKIQLlpsRRGDQLTLPP 258
Cdd:PHA03247 2577 PSEPAVTSRARRP-----DAPPQSARPRAPVDDRGDPRGPAPPSPLppdTHAPDPPPPSPSPAANEP---DPHPPPTVPP 2648

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  259 PPELGYSITAEDLDMERKASLQ------------WFNKVLEDK--PDDASASATDGPPSTSPPFTFTLPAV----GPAAS 320
Cdd:PHA03247 2649 PERPRDDPAPGRVSRPRRARRLgraaqassppqrPRRRAARPTvgSLTSLADPPPPPPTPEPAPHALVSATplppGPAAA 2728

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  321 PASLPAPSSNPLLESLKKMQESPA--------PSSSEPAEAATVAAPSPPKTPSLLAPLVSPLAGPLASTSSDSKPAATF 392
Cdd:PHA03247 2729 RQASPALPAAPAPPAVPAGPATPGgparparpPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPP 2808

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568937920  393 LGLASASSITPLTDSKSSGVSQAEQSVSTPASTASSPTPKPSMLFGMLSPPASSSSLATPAPACASPMFKPIFPA 467
Cdd:PHA03247 2809 AAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPV 2883
Chi1 super family cl43877
Chitinase [Carbohydrate transport and metabolism];
678-924 2.23e-04

Chitinase [Carbohydrate transport and metabolism];


The actual alignment was detected with superfamily member COG3469:

Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 45.13  E-value: 2.23e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 678 SSSAKPALPTYPGANSQPTFGATDGATKPALAPSFGSSFTFGNSVASAPSAAPAPATFGSAAQPAFGGLkAAASTFGAPA 757
Cdd:COG3469    2 SSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTA-ATSSTTSTTA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 758 STQPAFGSTTSVFSFGSATTSGFGAaataatttqttnsgsssslfgssAPSPFTFGGSAAPAGSGGFGLSATPGTSSTSG 837
Cdd:COG3469   81 TATAAAAAATSTSATLVATSTASGA-----------------------NTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSG 137

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 838 TFSFGSGQSGTPGTTTSfgslsQNTLGAPSQGSPFAFSVGSTPESKPVFGGTSTPTFGQSAPAPGVGTTGSSLSFGASST 917
Cdd:COG3469  138 ASATSSAGSTTTTTTVS-----GTETATGGTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGL 212


                 ....*..
gi 568937920 918 PAQGFVG 924
Cdd:COG3469  213 PKHVLVG 219
 
Name Accession Description Interval E-value
POM121 pfam15229
POM121 family;
52-287 7.00e-93

POM121 family;


Pssm-ID: 464572 [Multi-domain]  Cd Length: 226  Bit Score: 293.49  E-value: 7.00e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920   52 KEKKKRTVAEED-QLHLDGQENKRRRHDSGGSGHSAFEPLVANGVPAAFVPKPGSLKRSLASQSSDDHLNKRSRTSSVSS 130
Cdd:pfam15229   1 KESRKRTVKDEDgQSVTEGQDSKRRRPDSSGSAQSAFRPLLANGVPSSFVPKPGPLKRGLHSKSSEDSLIKRSQTSSLSS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  131 LasactggipsSSRNAITSSYSSTRGISQLWKRSGPTSSPFSSPASSRSQTPERPAKKTREEEPCQqSSSSPPLVTDKES 210
Cdd:pfam15229  81 C----------SKRNAITSSYSSTRGFPQLQKRSGPGASPLSSPASSRSQTPQRPAKKARSEEGHS-SSSSASVKSDKEK 149

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568937920  211 PGEKVTDTTTGKQQSSWTSPPTPGSSGQRKRKIQLLPSRRGDQLTLPPPPELGYSITAEDLDMERKASLQWFNKVLE 287
Cdd:pfam15229 150 QPEKVADTPSGKKQNSRNSPPTSGSSRPRKRKIPLLPSRRGEPLTLPPPPQLGYRVTAEDLDLEKKAALQWINKVLE 226
PHA03247 PHA03247
large tegument protein UL36; Provisional
 182-467 3.44e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 54.56  E-value: 3.44e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  182 PERPAKKTREEEPcqqssSSPPLVTDKESPGEKVTDTTTGKQQSSW---TSPPTPGSSGQRKRKIQLlpsRRGDQLTLPP 258
Cdd:PHA03247 2577 PSEPAVTSRARRP-----DAPPQSARPRAPVDDRGDPRGPAPPSPLppdTHAPDPPPPSPSPAANEP---DPHPPPTVPP 2648

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  259 PPELGYSITAEDLDMERKASLQ------------WFNKVLEDK--PDDASASATDGPPSTSPPFTFTLPAV----GPAAS 320
Cdd:PHA03247 2649 PERPRDDPAPGRVSRPRRARRLgraaqassppqrPRRRAARPTvgSLTSLADPPPPPPTPEPAPHALVSATplppGPAAA 2728

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  321 PASLPAPSSNPLLESLKKMQESPA--------PSSSEPAEAATVAAPSPPKTPSLLAPLVSPLAGPLASTSSDSKPAATF 392
Cdd:PHA03247 2729 RQASPALPAAPAPPAVPAGPATPGgparparpPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPP 2808

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568937920  393 LGLASASSITPLTDSKSSGVSQAEQSVSTPASTASSPTPKPSMLFGMLSPPASSSSLATPAPACASPMFKPIFPA 467
Cdd:PHA03247 2809 AAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPV 2883
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
678-924 2.23e-04

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 45.13  E-value: 2.23e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 678 SSSAKPALPTYPGANSQPTFGATDGATKPALAPSFGSSFTFGNSVASAPSAAPAPATFGSAAQPAFGGLkAAASTFGAPA 757
Cdd:COG3469    2 SSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTA-ATSSTTSTTA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 758 STQPAFGSTTSVFSFGSATTSGFGAaataatttqttnsgsssslfgssAPSPFTFGGSAAPAGSGGFGLSATPGTSSTSG 837
Cdd:COG3469   81 TATAAAAAATSTSATLVATSTASGA-----------------------NTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSG 137

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 838 TFSFGSGQSGTPGTTTSfgslsQNTLGAPSQGSPFAFSVGSTPESKPVFGGTSTPTFGQSAPAPGVGTTGSSLSFGASST 917
Cdd:COG3469  138 ASATSSAGSTTTTTTVS-----GTETATGGTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGL 212


                 ....*..
gi 568937920 918 PAQGFVG 924
Cdd:COG3469  213 PKHVLVG 219
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 88-399 1.31e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 42.85  E-value: 1.31e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920   88 EPLVANGVPAAFVPKPGSLKRSLASQSSDDHLNKRSRTSSVSSLASACTGGIPSSSRNAITSSYSSTRGISQLWKRSGPT 167
Cdd:PHA03307  127 PPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRP 206

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  168 SSPFSSPASSRSQTPERPAKKTREEEPCQQSSSSPPLVTDKESPGEKVTDTTTGKQQSSWTSPPTPGSSGQRKRKIQLLP 247
Cdd:PHA03307  207 PRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPAS 286

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  248 SRRGDQLTLPPPPELGYSitAEDLDMERKASLQWfnkvlEDKPDDASASATDGPPSTSPpftftlPAVGPAASPASLPAP 327
Cdd:PHA03307  287 SSSSPRERSPSPSPSSPG--SGPAPSSPRASSSS-----SSSRESSSSSTSSSSESSRG------AAVSPGPSPSRSPSP 353

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568937920  328 SSNPLLESLKKMQESPAPSSSEPAEAATVAAPSPPKTPSLLAPLVSPLAGPLASTSSDSKPAATFLGLASAS 399
Cdd:PHA03307  354 SRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGA 425
SAP130_C pfam16014
Histone deacetylase complex subunit SAP130 C-terminus;
297-391 3.22e-03

Histone deacetylase complex subunit SAP130 C-terminus;


Pssm-ID: 464973 [Multi-domain]  Cd Length: 371  Bit Score: 41.07  E-value: 3.22e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  297 ATDGPPSTSPPFTFTLPAVGPAASP-----ASLPAPSSNPLLESLKKMQES---PAPSSSEPAEAATVAAPSPPKTPSLL 368
Cdd:pfam16014  69 APAAPPSQPSVVLSTLPAAMAVTPPipasmANVVAPPTQPAASSTAACAVSsvlPEIKIKQEAEPMDTSQSVPPLTPTSI 148

                          90       100
                  ....*....|....*....|...
gi 568937920  369 APLVSPLAGPLASTSSDSKPAAT 391
Cdd:pfam16014 149 SPALTSLANNLSVPAGDLLPGAS 171
PTZ00473 PTZ00473
Plasmodium Vir superfamily; Provisional
 829-930 4.20e-03

Plasmodium Vir superfamily; Provisional


Pssm-ID: 240430 [Multi-domain]  Cd Length: 420  Bit Score: 40.60  E-value: 4.20e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 829 TPGTSSTSGTFSFGSGQSGTPGTTTSFGSLSQNTLGAPSQGSpFAFSVGSTPESKPVFGGTStptfGQSAPAPGVGTTGS 908
Cdd:PTZ00473 316 GPYNANYGGQFNSRSGRTGSSESIRGFTYDSSTTYGGSSYGT-SQTDSTSTYGSRSTFDSST----GGGSQSGGGSTYGG 390

                         90       100
                 ....*....|....*....|..
gi 568937920 909 SLSFGASSTPAQGFVGVGPFGS 930
Cdd:PTZ00473 391 SSTFDGSSRGSSDSFGVSYFGP 412
 
Name Accession Description Interval E-value
POM121 pfam15229
POM121 family;
52-287 7.00e-93

POM121 family;


Pssm-ID: 464572 [Multi-domain]  Cd Length: 226  Bit Score: 293.49  E-value: 7.00e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920   52 KEKKKRTVAEED-QLHLDGQENKRRRHDSGGSGHSAFEPLVANGVPAAFVPKPGSLKRSLASQSSDDHLNKRSRTSSVSS 130
Cdd:pfam15229   1 KESRKRTVKDEDgQSVTEGQDSKRRRPDSSGSAQSAFRPLLANGVPSSFVPKPGPLKRGLHSKSSEDSLIKRSQTSSLSS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  131 LasactggipsSSRNAITSSYSSTRGISQLWKRSGPTSSPFSSPASSRSQTPERPAKKTREEEPCQqSSSSPPLVTDKES 210
Cdd:pfam15229  81 C----------SKRNAITSSYSSTRGFPQLQKRSGPGASPLSSPASSRSQTPQRPAKKARSEEGHS-SSSSASVKSDKEK 149

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568937920  211 PGEKVTDTTTGKQQSSWTSPPTPGSSGQRKRKIQLLPSRRGDQLTLPPPPELGYSITAEDLDMERKASLQWFNKVLE 287
Cdd:pfam15229 150 QPEKVADTPSGKKQNSRNSPPTSGSSRPRKRKIPLLPSRRGEPLTLPPPPQLGYRVTAEDLDLEKKAALQWINKVLE 226
PHA03247 PHA03247
large tegument protein UL36; Provisional
 182-467 3.44e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 54.56  E-value: 3.44e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  182 PERPAKKTREEEPcqqssSSPPLVTDKESPGEKVTDTTTGKQQSSW---TSPPTPGSSGQRKRKIQLlpsRRGDQLTLPP 258
Cdd:PHA03247 2577 PSEPAVTSRARRP-----DAPPQSARPRAPVDDRGDPRGPAPPSPLppdTHAPDPPPPSPSPAANEP---DPHPPPTVPP 2648

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  259 PPELGYSITAEDLDMERKASLQ------------WFNKVLEDK--PDDASASATDGPPSTSPPFTFTLPAV----GPAAS 320
Cdd:PHA03247 2649 PERPRDDPAPGRVSRPRRARRLgraaqassppqrPRRRAARPTvgSLTSLADPPPPPPTPEPAPHALVSATplppGPAAA 2728

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  321 PASLPAPSSNPLLESLKKMQESPA--------PSSSEPAEAATVAAPSPPKTPSLLAPLVSPLAGPLASTSSDSKPAATF 392
Cdd:PHA03247 2729 RQASPALPAAPAPPAVPAGPATPGgparparpPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPP 2808

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568937920  393 LGLASASSITPLTDSKSSGVSQAEQSVSTPASTASSPTPKPSMLFGMLSPPASSSSLATPAPACASPMFKPIFPA 467
Cdd:PHA03247 2809 AAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPV 2883
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 289-431 1.43e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 48.94  E-value: 1.43e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 289 KPDDASASATDGPPSTSPPFTFTLPAVGPAASPASLPAPssnplleslkkmQESPAPSSSEPAEAATVAAPSPPKTPSLL 368
Cdd:PRK14951 365 KPAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAP------------AAAPAAAASAPAAPPAAAPPAPVAAPAAA 432

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568937920 369 APLVSPLAGPLASTSSDSKPAATflgLASASSITPLTDSKSSGVSQAEQSVSTPASTASSPTP 431
Cdd:PRK14951 433 APAAAPAAAPAAVALAPAPPAQA---APETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
286-432 2.68e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 47.85  E-value: 2.68e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 286 LEDKPDDASASaTDGPPSTSPPFTFTLPAVGPAASPASLPAPSSNPLLESlkkmqeSPAPSSSEPAEAATVAAPSPPKTP 365
Cdd:PRK14971 362 LTQKGDDASGG-RGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQ------PSAPQSATQPAGTPPTVSVDPPAA 434

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568937920 366 SLLAPLVSPLAGPLASTSSDSKPAATFLglasASSITPLTdskSSGVSQAEQSVSTPASTASSPTPK 432
Cdd:PRK14971 435 VPVNPPSTAPQAVRPAQFKEEKKIPVSK----VSSLGPST---LRPIQEKAEQATGNIKEAPTGTQK 494
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 289-391 7.00e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 46.81  E-value: 7.00e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  289 KPDDASASATDGPPSTSPPftfTLPAVGPAASPASLPAPSSNPLLESLKKMQESPAPSSSEPAEAATVAAPSPPKTPSLL 368
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAA---SAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113

                          90       100
                  ....*....|....*....|....*...
gi 568937920  369 APLVSPLAGPLAST-----SSDSKPAAT 391
Cdd:PRK12270  114 EDEVTPLRGAAAAVaknmdASLEVPTAT 141
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
678-924 2.23e-04

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 45.13  E-value: 2.23e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 678 SSSAKPALPTYPGANSQPTFGATDGATKPALAPSFGSSFTFGNSVASAPSAAPAPATFGSAAQPAFGGLkAAASTFGAPA 757
Cdd:COG3469    2 SSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTA-ATSSTTSTTA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 758 STQPAFGSTTSVFSFGSATTSGFGAaataatttqttnsgsssslfgssAPSPFTFGGSAAPAGSGGFGLSATPGTSSTSG 837
Cdd:COG3469   81 TATAAAAAATSTSATLVATSTASGA-----------------------NTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSG 137

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 838 TFSFGSGQSGTPGTTTSfgslsQNTLGAPSQGSPFAFSVGSTPESKPVFGGTSTPTFGQSAPAPGVGTTGSSLSFGASST 917
Cdd:COG3469  138 ASATSSAGSTTTTTTVS-----GTETATGGTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGL 212


                 ....*..
gi 568937920 918 PAQGFVG 924
Cdd:COG3469  213 PKHVLVG 219
PHA03247 PHA03247
large tegument protein UL36; Provisional
 294-695 4.49e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.54  E-value: 4.49e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  294 SASATDGPPSTSPPFTFTLPAVGPAAsPASLP-APSSNP----LLESLKKMQESPAPSSSEPAEAATVAAPSPPKTPSLL 368
Cdd:PHA03247 2491 AAGAAPDPGGGGPPDPDAPPAPSRLA-PAILPdEPVGEPvhprMLTWIRGLEELASDDAGDPPPPLPPAAPPAAPDRSVP 2569

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  369 APLVSPLAGPLASTSSDSKPAATflgLASASSITPLTDSKSSgvsqAEQSVSTPASTASSPTPKPSmlfgmLSPPASSSS 448
Cdd:PHA03247 2570 PPRPAPRPSEPAVTSRARRPDAP---PQSARPRAPVDDRGDP----RGPAPPSPLPPDTHAPDPPP-----PSPSPAANE 2637

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  449 LATPAPACASPMFKPIFPATPKSESDSPLPSSSSAATTASSSTAPPTAASTTPTFKPIFDKMEPFTAMPLSTPfslKQTT 528
Cdd:PHA03247 2638 PDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEP---APHA 2714

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  529 ATATTTATSAPLFTGLGTATSTVASGTAASASKPVFGFGVTTAAS-TASSTMTSTSQSVLFGGAPPVTTSSSAPALASIF 607
Cdd:PHA03247 2715 LVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARpPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSES 2794

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  608 QFGKPLAPAASAAGTSFSQPLASSTQTAASNSGFSGFGSTLTTSTSAPATTSQPTLTFSNTVTPTFNI-----PFSSSAK 682
Cdd:PHA03247 2795 RESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVrrrppSRSPAAK 2874

                         410
                  ....*....|...
gi 568937920  683 PALPTYPGANSQP 695
Cdd:PHA03247 2875 PAAPARPPVRRLA 2887
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
 542-930 7.22e-04

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 43.61  E-value: 7.22e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 542 TGLGTATSTVASGTAASASKPVFGFGVTTAASTASSTMTSTSQSVLFGGAPPVTTSSSAPALASIFQFGKPLAPAASAAG 621
Cdd:COG4625  165 GGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 244

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 622 TSFSQPLASSTQTAASNSGFSGFGSTLTTSTSAPATTSQPTLTFSNTVTPTFNIPFSSSAKPALPTYPGANSQPTFGATD 701
Cdd:COG4625  245 GGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 324

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 702 GATKPALAPSFGSSFTFGNSVASAPSAAPAPATFGSAAQPAFGGLKAAASTFGAPASTQPAFGSTTSVFSFGSATTSGFG 781
Cdd:COG4625  325 GGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGG 404

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 782 AAATAATTTQTTNSGSSSSLFGSSAPSPFTFGGSAAPAGSGGFGLSATPGTSSTSGTFSFGSGQSGTP-GTTTSFGSLSQ 860
Cdd:COG4625  405 AGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGaGTLTLTGNNTY 484

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568937920 861 NTLGAPSQGSPFAFSVGSTPE--------SKPVFGGTSTPTFGQSAPAPGVGTTGSSLSFGASSTPAQGFVGVGPFGS 930
Cdd:COG4625  485 TGTTTVNGGGNYTQSAGSTLAvevdaansDRLVVTGTATLNGGTVVVLAGGYAPGTTYTILAVAAALDALAGNGDLSA 562
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 290-390 7.66e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 43.32  E-value: 7.66e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 290 PDDASASATDGPPSTSPPFTFTLPAVGPAASPASLPAPSSNPLLESLKKM--QESPAPSSSEPAEAATVAAPSPPKTPSL 367
Cdd:PRK07994 376 APAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAArqQLQRAQGATKAKKSEPAAASRARPVNSA 455

                         90       100
                 ....*....|....*....|...
gi 568937920 368 LAPLVSPLAGPLASTSSDSKPAA 390
Cdd:PRK07994 456 LERLASVRPAPSALEKAPAKKEA 478
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 88-399 1.31e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 42.85  E-value: 1.31e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920   88 EPLVANGVPAAFVPKPGSLKRSLASQSSDDHLNKRSRTSSVSSLASACTGGIPSSSRNAITSSYSSTRGISQLWKRSGPT 167
Cdd:PHA03307  127 PPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRP 206

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  168 SSPFSSPASSRSQTPERPAKKTREEEPCQQSSSSPPLVTDKESPGEKVTDTTTGKQQSSWTSPPTPGSSGQRKRKIQLLP 247
Cdd:PHA03307  207 PRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPAS 286

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  248 SRRGDQLTLPPPPELGYSitAEDLDMERKASLQWfnkvlEDKPDDASASATDGPPSTSPpftftlPAVGPAASPASLPAP 327
Cdd:PHA03307  287 SSSSPRERSPSPSPSSPG--SGPAPSSPRASSSS-----SSSRESSSSSTSSSSESSRG------AAVSPGPSPSRSPSP 353

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568937920  328 SSNPLLESLKKMQESPAPSSSEPAEAATVAAPSPPKTPSLLAPLVSPLAGPLASTSSDSKPAATFLGLASAS 399
Cdd:PHA03307  354 SRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGA 425
SAP130_C pfam16014
Histone deacetylase complex subunit SAP130 C-terminus;
297-391 3.22e-03

Histone deacetylase complex subunit SAP130 C-terminus;


Pssm-ID: 464973 [Multi-domain]  Cd Length: 371  Bit Score: 41.07  E-value: 3.22e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920  297 ATDGPPSTSPPFTFTLPAVGPAASP-----ASLPAPSSNPLLESLKKMQES---PAPSSSEPAEAATVAAPSPPKTPSLL 368
Cdd:pfam16014  69 APAAPPSQPSVVLSTLPAAMAVTPPipasmANVVAPPTQPAASSTAACAVSsvlPEIKIKQEAEPMDTSQSVPPLTPTSI 148

                          90       100
                  ....*....|....*....|...
gi 568937920  369 APLVSPLAGPLASTSSDSKPAAT 391
Cdd:pfam16014 149 SPALTSLANNLSVPAGDLLPGAS 171
PTZ00473 PTZ00473
Plasmodium Vir superfamily; Provisional
 829-930 4.20e-03

Plasmodium Vir superfamily; Provisional


Pssm-ID: 240430 [Multi-domain]  Cd Length: 420  Bit Score: 40.60  E-value: 4.20e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 829 TPGTSSTSGTFSFGSGQSGTPGTTTSFGSLSQNTLGAPSQGSpFAFSVGSTPESKPVFGGTStptfGQSAPAPGVGTTGS 908
Cdd:PTZ00473 316 GPYNANYGGQFNSRSGRTGSSESIRGFTYDSSTTYGGSSYGT-SQTDSTSTYGSRSTFDSST----GGGSQSGGGSTYGG 390

                         90       100
                 ....*....|....*....|..
gi 568937920 909 SLSFGASSTPAQGFVGVGPFGS 930
Cdd:PTZ00473 391 SSTFDGSSRGSSDSFGVSYFGP 412
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
293-519 5.25e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 40.60  E-value: 5.25e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 293 ASASATDGPPSTSPPFTFTLPAVGPAASPASLPAPSSNPLLESLKKMQESPAPSSSePAEAATVAAPSPPKTPSLLAPlv 372
Cdd:PRK07003 418 AAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPAD-SGSASAPASDAPPDAAFEPAP-- 494

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 373 sPLAGPLASTSSDSKPAATfLGLASASSITPLTDSKSSGVSQAEQSVSTPASTASSPTPKPSML--FGMLSPPASSSSLA 450
Cdd:PRK07003 495 -RAAAPSAATPAAVPDARA-PAAASREDAPAAAAPPAPEARPPTPAAAAPAARAGGAAAALDVLrnAGMRVSSDRGARAA 572

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568937920 451 TPAPACASPMFKPIFPATPKSESDSPLPSSSSAATTASSSTAPPTAASTTPTFKPIFDKMEPFTAMPLS 519
Cdd:PRK07003 573 AAAKPAAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQAAESRGAPPPWEDIPPDDYVPLS 641
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 293-433 8.72e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 39.85  E-value: 8.72e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568937920 293 ASASATDGPPSTSPPftftLPAVGPAASPASLPAPSsnplleslkkmQESPAPSSSEPAEAATVAAPSPPKTPSLLAPLV 372
Cdd:PRK07994 363 APLPEPEVPPQSAAP----AASAQATAAPTAAVAPP-----------QAPAVPPPPASAPQQAPAVPLPETTSQLLAARQ 427

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568937920 373 SPLAGPLASTSSDSKPAATFLGLASASSITPLTDSKSSGVSQAEQSVSTPAS--TASSPTPKP 433
Cdd:PRK07994 428 QLQRAQGATKAKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYrwKATNPVEVK 490
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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