View
Concise Results
Standard Results
Full Results
histone deacetylase complex subunit SAP130 isoform X1 [Mus musculus]
Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
SAP130_C
pfam16014 Histone deacetylase complex subunit SAP130 C-terminus;
655-1060
0e+00
Histone deacetylase complex subunit SAP130 C-terminus;
Pssm-ID: 464973 [Multi-domain]
Cd Length: 371
Bit Score: 550.69
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 655 A Q GSSPRPSILRKKPAT D G mavrktllppqppdvatprvessmrsasgsprpag AKPK SEV HV SI A T PVTV SL E TISN QN 734
Cdd:pfam16014 1 A L GSSPRPSILRKKPAT E G ----------------------------------- AKPK PDI HV AV A P PVTV AV E ALPG QN 45
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 735 A EQ P T VAVP P TA Q Q P PPT IP SMI A A A S PPSQP AIA LST I P G A VP VTPP ---- ITTIA A T PT LS A p VGG T PSTVLGPPV PE 810
Cdd:pfam16014 46 S EQ Q T ASAS P PS Q H P AQA IP TIL A P A A PPSQP SVV LST L P A A MA VTPP ipas MANVV A P PT QP A - ASS T AACAVSSVL PE 124
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 811 IK V K E EAEP V D ITR pvs T VPPL ATNTV SP S L AL LA S NLS M P PS DL P PGASPRKKPRKQQHVISTEEG D MMETNSTD D EKS 890
Cdd:pfam16014 125 IK I K Q EAEP M D TSQ --- S VPPL TPTSI SP A L TS LA N NLS V P AG DL L PGASPRKKPRKQQHVISTEEG E MMETNSTD E EKS 201
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 891 A A K S L LVK AEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKK AM LQ EI ANQKGV S C 970
Cdd:pfam16014 202 A P K P L TSR AEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKK GT LQ DM ANQKGV T C 281
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 971 RAQGWK V HLCAAQLLQLTNLEHDVY E RLT N LQEG I IPKKKA A TDDDLHRINELIQGNMQRCKLVMDQI S EARDSM L KVLD 1050
Cdd:pfam16014 282 RAQGWK I HLCAAQLLQLTNLEHDVY S RLT T LQEG L IPKKKA G TDDDLHRINELIQGNMQRCKLVMDQI T EARDSM M KVLD 361
410
....*....|
gi 569003891 1051 HKDRVLKLLN 1060
Cdd:pfam16014 362 HKDRVLKLLN 371
PHA03247 super family
cl33720 large tegument protein UL36; Provisional
437-906
8.59e-07
large tegument protein UL36; Provisional
PHA03247 :Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 53.40
E-value: 8.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 437 PRIQPDY PPER SSLI P i SGH R A S PNPV A METRNDNRP S V P V Q fqyfl PTYPPS A Y P laah T YTPI TS SVSTIRQY P VSAQ 516
Cdd:PHA03247 2641 HPPPTVP PPER PRDD P - APG R V S RPRR A RRLGRAAQA S S P P Q ----- RPRRRA A R P ---- T VGSL TS LADPPPPP P TPEP 2710
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 517 AP NSTIT A qtgvgvastvhl N P MQLMTVD A SH A RHIQGIQ PAP ISTQGIQPA P I G tsgiq PA PIGT P GIHSAA P INTQGL 596
Cdd:PHA03247 2711 AP HALVS A ------------ T P LPPGPAA A RQ A SPALPAA PAP PAVPAGPAT P G G ----- PA RPAR P PTTAGP P APAPPA 2773
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 597 Q PAA manq Q P QPEGKTS AV VLADGAT iva NPISN P FSA A PAATT V VQTHSQSASTNT PA QGSS P RP S ILRKK P AT dgmav 676
Cdd:PHA03247 2774 A PAA ---- G P PRRLTRP AV ASLSESR --- ESLPS P WDP A DPPAA V LAPAAALPPAAS PA GPLP P PT S AQPTA P PP ----- 2841
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 677 rktll PP Q PP DVAT P R ---- VESSMRSASGSP R PAG AKP KSEVHVSIATPVTVSLET i S NQNAEQ P TVAVPPTA Q QPP P T 752
Cdd:PHA03247 2842 ----- PP G PP PPSL P L ggsv APGGDVRRRPPS R SPA AKP AAPARPPVRRLARPAVSR - S TESFAL P PDQPERPP Q PQA P P 2915
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 753 I P SMIAAAS PP S QP AIALSTI P GAV P VTP P I T TI A ATP tls A P V G GT P STV LG P ------ P VP EIK V KEE A EPVDI tr P V 826
Cdd:PHA03247 2916 P P QPQPQPP PP P QP QPPPPPP P RPQ P PLA P T T DP A GAG --- E P S G AV P QPW LG A lvpgrv A VP RFR V PQP A PSREA -- P A 2990
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 827 S TV PPL a T NTVSPSLALL AS N L SMPPSDL PP GA S prkkp R KQ QHVIS -- TE EG D MMETNST D D E K S AAKS L LVKAEKRKS 904
Cdd:PHA03247 2991 S ST PPL - T GHSLSRVSSW AS S L ALHEETD PP PV S ----- L KQ TLWPP dd TE DS D ADSLFDS D S E R S DLEA L DPLPPEPHD 3064
..
gi 569003891 905 P P 906
Cdd:PHA03247 3065 P F 3066
PHA03247 super family
cl33720 large tegument protein UL36; Provisional
8-359
2.34e-05
large tegument protein UL36; Provisional
PHA03247 :Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 48.78
E-value: 2.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 8 R L R I P QASGLNVEMSSQQF P RLGTPSPGLSQ PPS QIASSGSAGLINQVATVND E AG RD ADVGT R EHVGPSSSLPP R EEKQ 87
Cdd:PHA03247 2597 R P R A P VDDRGDPRGPAPPS P LPPDTHAPDPP PPS PSPAANEPDPHPPPTVPPP E RP RD DPAPG R VSRPRRARRLG R AAQA 2676
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 88 EPVVV RP YPQVQMLPAHHAVAS A T P VAVTAP P AHLTP A VPLSFSEGLMKPPPKPTM P SR P I APAPP STMS l P P KV PG QVT 167
Cdd:PHA03247 2677 SSPPQ RP RRRAARPTVGSLTSL A D P PPPPPT P EPAPH A LVSATPLPPGPAAARQAS P AL P A APAPP AVPA - G P AT PG GPA 2755
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 168 VTMESSIPQASAI P VATISGQQ G H P SN L HHIMTTNVQM S IIRSNA P GP P LHIG A SH L PR gaaaaavms SSKVTTVLR P TS 247
Cdd:PHA03247 2756 RPARPPTTAGPPA P APPAAPAA G P P RR L TRPAVASLSE S RESLPS P WD P ADPP A AV L AP --------- AAALPPAAS P AG 2826
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 248 Q LP NAAT AQP AVQHLIHQ P IQ sr P PVTTSSTIP P AVVATVSATRAQSPVITTTA A HAADST L S RP TL S IQHPPS A -- AIS 325
Cdd:PHA03247 2827 P LP PPTS AQP TAPPPPPG P PP -- P SLPLGGSVA P GGDVRRRPPSRSPAAKPAAP A RPPVRR L A RP AV S RSTESF A lp PDQ 2904
330 340 350
....*....|....*....|....*....|....
gi 569003891 326 IQ RP A Q SRDVTTRITL P SH P ALGT P KQQLHTMAQ 359
Cdd:PHA03247 2905 PE RP P Q PQAPPPPQPQ P QP P PPPQ P QPPPPPPPR 2938
Name
Accession
Description
Interval
E-value
SAP130_C
pfam16014 Histone deacetylase complex subunit SAP130 C-terminus;
655-1060
0e+00
Histone deacetylase complex subunit SAP130 C-terminus;
Pssm-ID: 464973 [Multi-domain]
Cd Length: 371
Bit Score: 550.69
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 655 A Q GSSPRPSILRKKPAT D G mavrktllppqppdvatprvessmrsasgsprpag AKPK SEV HV SI A T PVTV SL E TISN QN 734
Cdd:pfam16014 1 A L GSSPRPSILRKKPAT E G ----------------------------------- AKPK PDI HV AV A P PVTV AV E ALPG QN 45
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 735 A EQ P T VAVP P TA Q Q P PPT IP SMI A A A S PPSQP AIA LST I P G A VP VTPP ---- ITTIA A T PT LS A p VGG T PSTVLGPPV PE 810
Cdd:pfam16014 46 S EQ Q T ASAS P PS Q H P AQA IP TIL A P A A PPSQP SVV LST L P A A MA VTPP ipas MANVV A P PT QP A - ASS T AACAVSSVL PE 124
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 811 IK V K E EAEP V D ITR pvs T VPPL ATNTV SP S L AL LA S NLS M P PS DL P PGASPRKKPRKQQHVISTEEG D MMETNSTD D EKS 890
Cdd:pfam16014 125 IK I K Q EAEP M D TSQ --- S VPPL TPTSI SP A L TS LA N NLS V P AG DL L PGASPRKKPRKQQHVISTEEG E MMETNSTD E EKS 201
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 891 A A K S L LVK AEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKK AM LQ EI ANQKGV S C 970
Cdd:pfam16014 202 A P K P L TSR AEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKK GT LQ DM ANQKGV T C 281
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 971 RAQGWK V HLCAAQLLQLTNLEHDVY E RLT N LQEG I IPKKKA A TDDDLHRINELIQGNMQRCKLVMDQI S EARDSM L KVLD 1050
Cdd:pfam16014 282 RAQGWK I HLCAAQLLQLTNLEHDVY S RLT T LQEG L IPKKKA G TDDDLHRINELIQGNMQRCKLVMDQI T EARDSM M KVLD 361
410
....*....|
gi 569003891 1051 HKDRVLKLLN 1060
Cdd:pfam16014 362 HKDRVLKLLN 371
PHA03247
PHA03247 large tegument protein UL36; Provisional
437-906
8.59e-07
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 53.40
E-value: 8.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 437 PRIQPDY PPER SSLI P i SGH R A S PNPV A METRNDNRP S V P V Q fqyfl PTYPPS A Y P laah T YTPI TS SVSTIRQY P VSAQ 516
Cdd:PHA03247 2641 HPPPTVP PPER PRDD P - APG R V S RPRR A RRLGRAAQA S S P P Q ----- RPRRRA A R P ---- T VGSL TS LADPPPPP P TPEP 2710
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 517 AP NSTIT A qtgvgvastvhl N P MQLMTVD A SH A RHIQGIQ PAP ISTQGIQPA P I G tsgiq PA PIGT P GIHSAA P INTQGL 596
Cdd:PHA03247 2711 AP HALVS A ------------ T P LPPGPAA A RQ A SPALPAA PAP PAVPAGPAT P G G ----- PA RPAR P PTTAGP P APAPPA 2773
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 597 Q PAA manq Q P QPEGKTS AV VLADGAT iva NPISN P FSA A PAATT V VQTHSQSASTNT PA QGSS P RP S ILRKK P AT dgmav 676
Cdd:PHA03247 2774 A PAA ---- G P PRRLTRP AV ASLSESR --- ESLPS P WDP A DPPAA V LAPAAALPPAAS PA GPLP P PT S AQPTA P PP ----- 2841
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 677 rktll PP Q PP DVAT P R ---- VESSMRSASGSP R PAG AKP KSEVHVSIATPVTVSLET i S NQNAEQ P TVAVPPTA Q QPP P T 752
Cdd:PHA03247 2842 ----- PP G PP PPSL P L ggsv APGGDVRRRPPS R SPA AKP AAPARPPVRRLARPAVSR - S TESFAL P PDQPERPP Q PQA P P 2915
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 753 I P SMIAAAS PP S QP AIALSTI P GAV P VTP P I T TI A ATP tls A P V G GT P STV LG P ------ P VP EIK V KEE A EPVDI tr P V 826
Cdd:PHA03247 2916 P P QPQPQPP PP P QP QPPPPPP P RPQ P PLA P T T DP A GAG --- E P S G AV P QPW LG A lvpgrv A VP RFR V PQP A PSREA -- P A 2990
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 827 S TV PPL a T NTVSPSLALL AS N L SMPPSDL PP GA S prkkp R KQ QHVIS -- TE EG D MMETNST D D E K S AAKS L LVKAEKRKS 904
Cdd:PHA03247 2991 S ST PPL - T GHSLSRVSSW AS S L ALHEETD PP PV S ----- L KQ TLWPP dd TE DS D ADSLFDS D S E R S DLEA L DPLPPEPHD 3064
..
gi 569003891 905 P P 906
Cdd:PHA03247 3065 P F 3066
PHA03247
PHA03247 large tegument protein UL36; Provisional
578-869
2.44e-06
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 52.25
E-value: 2.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 578 AP IGTP G i HSAA P INTQG L Q P AAM A NQQ P Q P EGKTS A VVLADGATIVAN P ISN P FSAA pa A TTV V QTHSQSASTNTP AQ G 657
Cdd:PHA03247 2600 AP VDDR G - DPRG P APPSP L P P DTH A PDP P P P SPSPA A NEPDPHPPPTVP P PER P RDDP -- A PGR V SRPRRARRLGRA AQ A 2676
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 658 SSP r P SIL R KKP A TDGMAVRKT L LP P Q PP dvatprvessmrsasgs P RPAGAK P KSE V HVSIAT P VTVS leti SN Q NAEQ 737
Cdd:PHA03247 2677 SSP - P QRP R RRA A RPTVGSLTS L AD P P PP ----------------- P PTPEPA P HAL V SATPLP P GPAA ---- AR Q ASPA 2734
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 738 PTV A VP P T A QQPP P TI P SMI A AASP P SQP A IALSTI P G A V P VT -- P PIT T IA A TPT LS APVGGT PS TVLGPPV P EIKVKE 815
Cdd:PHA03247 2735 LPA A PA P P A VPAG P AT P GGP A RPAR P PTT A GPPAPA P P A A P AA gp P RRL T RP A VAS LS ESRESL PS PWDPADP P AAVLAP 2814
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 569003891 816 E A EPVDITR P VSTV PP LATNT - VS P SLALLASNL S M P P - SDLP PG ASP R KK P RKQQ 869
Cdd:PHA03247 2815 A A ALPPAAS P AGPL PP PTSAQ p TA P PPPPGPPPP S L P L g GSVA PG GDV R RR P PSRS 2870
PHA03247
PHA03247 large tegument protein UL36; Provisional
8-359
2.34e-05
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 48.78
E-value: 2.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 8 R L R I P QASGLNVEMSSQQF P RLGTPSPGLSQ PPS QIASSGSAGLINQVATVND E AG RD ADVGT R EHVGPSSSLPP R EEKQ 87
Cdd:PHA03247 2597 R P R A P VDDRGDPRGPAPPS P LPPDTHAPDPP PPS PSPAANEPDPHPPPTVPPP E RP RD DPAPG R VSRPRRARRLG R AAQA 2676
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 88 EPVVV RP YPQVQMLPAHHAVAS A T P VAVTAP P AHLTP A VPLSFSEGLMKPPPKPTM P SR P I APAPP STMS l P P KV PG QVT 167
Cdd:PHA03247 2677 SSPPQ RP RRRAARPTVGSLTSL A D P PPPPPT P EPAPH A LVSATPLPPGPAAARQAS P AL P A APAPP AVPA - G P AT PG GPA 2755
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 168 VTMESSIPQASAI P VATISGQQ G H P SN L HHIMTTNVQM S IIRSNA P GP P LHIG A SH L PR gaaaaavms SSKVTTVLR P TS 247
Cdd:PHA03247 2756 RPARPPTTAGPPA P APPAAPAA G P P RR L TRPAVASLSE S RESLPS P WD P ADPP A AV L AP --------- AAALPPAAS P AG 2826
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 248 Q LP NAAT AQP AVQHLIHQ P IQ sr P PVTTSSTIP P AVVATVSATRAQSPVITTTA A HAADST L S RP TL S IQHPPS A -- AIS 325
Cdd:PHA03247 2827 P LP PPTS AQP TAPPPPPG P PP -- P SLPLGGSVA P GGDVRRRPPSRSPAAKPAAP A RPPVRR L A RP AV S RSTESF A lp PDQ 2904
330 340 350
....*....|....*....|....*....|....
gi 569003891 326 IQ RP A Q SRDVTTRITL P SH P ALGT P KQQLHTMAQ 359
Cdd:PHA03247 2905 PE RP P Q PQAPPPPQPQ P QP P PPPQ P QPPPPPPPR 2938
Atrophin-1
pfam03154 Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...
473-849
2.37e-04
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain]
Cd Length: 991
Bit Score: 45.53
E-value: 2.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 473 P SVPV Q FQYFL P TY PP SAYPLA A H T YT P IT S SV S TIR Q - Y P VSA Q A PN S T I - TA QTGVGVAS T VH L N P MQ L MT vdashar 550
Cdd:pfam03154 172 P VLQA Q SGAAS P PS PP PPGTTQ A A T AG P TP S AP S VPP Q g S P ATS Q P PN Q T Q s TA APHTLIQQ T PT L H P QR L PS ------- 244
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 551 hiqgiq P A P ISTQGI QP A P IGTSGI QP A P ig T P GI H SAA P INTQG LQ PAAMAN Q Q P Q P E gktsavvladg ATIVAN P I S N 630
Cdd:pfam03154 245 ------ P H P PLQPMT QP P P PSQVSP QP L P -- Q P SL H GQM P PMPHS LQ TGPSHM Q H P V P P ----------- QPFPLT P Q S S 305
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 631 PFSAA P AATTVVQTH SQ SASTNT P A Q GSSPRPSIL R KK P ATDG - MAVRKTLL PP QP P DVAT P RVE S SMRSA --------- 700
Cdd:pfam03154 306 QSQVP P GPSPAAPGQ SQ QRIHTP P S Q SQLQSQQPP R EQ P LPPA p LSMPHIKP PP TT P IPQL P NPQ S HKHPP hlsgpspfq 385
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 701 -- S GS P R P AGA KP K S EV --- H VSI A T P VTVS L ETI S N Q ---- N A EQ P TVAVPPTAQQ P PPTI P SMIAAASP PSQ PAIAL - 770
Cdd:pfam03154 386 mn S NL P P P PAL KP L S SL sth H PPS A H P PPLQ L MPQ S Q Q lppp P A QP P VLTQSQSLPP P AASH P PTSGLHQV PSQ SPFPQ h 465
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 771 STI PG AV P V ----- T PP IT T IA A T P TLSA P VGGTP S T ------ VLGP P V P EIKV KEEA e PVDITR P V S TV PP LATNTVS P 839
Cdd:pfam03154 466 PFV PG GP P P itpps G PP TS T SS A M P GIQP P SSASV S S sgpvpa AVSC P L P PVQI KEEA - LDEAEE P E S PP PP PRSPSPE P 544
410
....*....|
gi 569003891 840 SLALLA S NL S 849
Cdd:pfam03154 545 TVVNTP S HA S 554
Name
Accession
Description
Interval
E-value
SAP130_C
pfam16014 Histone deacetylase complex subunit SAP130 C-terminus;
655-1060
0e+00
Histone deacetylase complex subunit SAP130 C-terminus;
Pssm-ID: 464973 [Multi-domain]
Cd Length: 371
Bit Score: 550.69
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 655 A Q GSSPRPSILRKKPAT D G mavrktllppqppdvatprvessmrsasgsprpag AKPK SEV HV SI A T PVTV SL E TISN QN 734
Cdd:pfam16014 1 A L GSSPRPSILRKKPAT E G ----------------------------------- AKPK PDI HV AV A P PVTV AV E ALPG QN 45
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 735 A EQ P T VAVP P TA Q Q P PPT IP SMI A A A S PPSQP AIA LST I P G A VP VTPP ---- ITTIA A T PT LS A p VGG T PSTVLGPPV PE 810
Cdd:pfam16014 46 S EQ Q T ASAS P PS Q H P AQA IP TIL A P A A PPSQP SVV LST L P A A MA VTPP ipas MANVV A P PT QP A - ASS T AACAVSSVL PE 124
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 811 IK V K E EAEP V D ITR pvs T VPPL ATNTV SP S L AL LA S NLS M P PS DL P PGASPRKKPRKQQHVISTEEG D MMETNSTD D EKS 890
Cdd:pfam16014 125 IK I K Q EAEP M D TSQ --- S VPPL TPTSI SP A L TS LA N NLS V P AG DL L PGASPRKKPRKQQHVISTEEG E MMETNSTD E EKS 201
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 891 A A K S L LVK AEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKK AM LQ EI ANQKGV S C 970
Cdd:pfam16014 202 A P K P L TSR AEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKK GT LQ DM ANQKGV T C 281
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 971 RAQGWK V HLCAAQLLQLTNLEHDVY E RLT N LQEG I IPKKKA A TDDDLHRINELIQGNMQRCKLVMDQI S EARDSM L KVLD 1050
Cdd:pfam16014 282 RAQGWK I HLCAAQLLQLTNLEHDVY S RLT T LQEG L IPKKKA G TDDDLHRINELIQGNMQRCKLVMDQI T EARDSM M KVLD 361
410
....*....|
gi 569003891 1051 HKDRVLKLLN 1060
Cdd:pfam16014 362 HKDRVLKLLN 371
PHA03247
PHA03247 large tegument protein UL36; Provisional
437-906
8.59e-07
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 53.40
E-value: 8.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 437 PRIQPDY PPER SSLI P i SGH R A S PNPV A METRNDNRP S V P V Q fqyfl PTYPPS A Y P laah T YTPI TS SVSTIRQY P VSAQ 516
Cdd:PHA03247 2641 HPPPTVP PPER PRDD P - APG R V S RPRR A RRLGRAAQA S S P P Q ----- RPRRRA A R P ---- T VGSL TS LADPPPPP P TPEP 2710
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 517 AP NSTIT A qtgvgvastvhl N P MQLMTVD A SH A RHIQGIQ PAP ISTQGIQPA P I G tsgiq PA PIGT P GIHSAA P INTQGL 596
Cdd:PHA03247 2711 AP HALVS A ------------ T P LPPGPAA A RQ A SPALPAA PAP PAVPAGPAT P G G ----- PA RPAR P PTTAGP P APAPPA 2773
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 597 Q PAA manq Q P QPEGKTS AV VLADGAT iva NPISN P FSA A PAATT V VQTHSQSASTNT PA QGSS P RP S ILRKK P AT dgmav 676
Cdd:PHA03247 2774 A PAA ---- G P PRRLTRP AV ASLSESR --- ESLPS P WDP A DPPAA V LAPAAALPPAAS PA GPLP P PT S AQPTA P PP ----- 2841
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 677 rktll PP Q PP DVAT P R ---- VESSMRSASGSP R PAG AKP KSEVHVSIATPVTVSLET i S NQNAEQ P TVAVPPTA Q QPP P T 752
Cdd:PHA03247 2842 ----- PP G PP PPSL P L ggsv APGGDVRRRPPS R SPA AKP AAPARPPVRRLARPAVSR - S TESFAL P PDQPERPP Q PQA P P 2915
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 753 I P SMIAAAS PP S QP AIALSTI P GAV P VTP P I T TI A ATP tls A P V G GT P STV LG P ------ P VP EIK V KEE A EPVDI tr P V 826
Cdd:PHA03247 2916 P P QPQPQPP PP P QP QPPPPPP P RPQ P PLA P T T DP A GAG --- E P S G AV P QPW LG A lvpgrv A VP RFR V PQP A PSREA -- P A 2990
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 827 S TV PPL a T NTVSPSLALL AS N L SMPPSDL PP GA S prkkp R KQ QHVIS -- TE EG D MMETNST D D E K S AAKS L LVKAEKRKS 904
Cdd:PHA03247 2991 S ST PPL - T GHSLSRVSSW AS S L ALHEETD PP PV S ----- L KQ TLWPP dd TE DS D ADSLFDS D S E R S DLEA L DPLPPEPHD 3064
..
gi 569003891 905 P P 906
Cdd:PHA03247 3065 P F 3066
PHA03247
PHA03247 large tegument protein UL36; Provisional
578-869
2.44e-06
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 52.25
E-value: 2.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 578 AP IGTP G i HSAA P INTQG L Q P AAM A NQQ P Q P EGKTS A VVLADGATIVAN P ISN P FSAA pa A TTV V QTHSQSASTNTP AQ G 657
Cdd:PHA03247 2600 AP VDDR G - DPRG P APPSP L P P DTH A PDP P P P SPSPA A NEPDPHPPPTVP P PER P RDDP -- A PGR V SRPRRARRLGRA AQ A 2676
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 658 SSP r P SIL R KKP A TDGMAVRKT L LP P Q PP dvatprvessmrsasgs P RPAGAK P KSE V HVSIAT P VTVS leti SN Q NAEQ 737
Cdd:PHA03247 2677 SSP - P QRP R RRA A RPTVGSLTS L AD P P PP ----------------- P PTPEPA P HAL V SATPLP P GPAA ---- AR Q ASPA 2734
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 738 PTV A VP P T A QQPP P TI P SMI A AASP P SQP A IALSTI P G A V P VT -- P PIT T IA A TPT LS APVGGT PS TVLGPPV P EIKVKE 815
Cdd:PHA03247 2735 LPA A PA P P A VPAG P AT P GGP A RPAR P PTT A GPPAPA P P A A P AA gp P RRL T RP A VAS LS ESRESL PS PWDPADP P AAVLAP 2814
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 569003891 816 E A EPVDITR P VSTV PP LATNT - VS P SLALLASNL S M P P - SDLP PG ASP R KK P RKQQ 869
Cdd:PHA03247 2815 A A ALPPAAS P AGPL PP PTSAQ p TA P PPPPGPPPP S L P L g GSVA PG GDV R RR P PSRS 2870
PHA03247
PHA03247 large tegument protein UL36; Provisional
8-359
2.34e-05
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 48.78
E-value: 2.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 8 R L R I P QASGLNVEMSSQQF P RLGTPSPGLSQ PPS QIASSGSAGLINQVATVND E AG RD ADVGT R EHVGPSSSLPP R EEKQ 87
Cdd:PHA03247 2597 R P R A P VDDRGDPRGPAPPS P LPPDTHAPDPP PPS PSPAANEPDPHPPPTVPPP E RP RD DPAPG R VSRPRRARRLG R AAQA 2676
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 88 EPVVV RP YPQVQMLPAHHAVAS A T P VAVTAP P AHLTP A VPLSFSEGLMKPPPKPTM P SR P I APAPP STMS l P P KV PG QVT 167
Cdd:PHA03247 2677 SSPPQ RP RRRAARPTVGSLTSL A D P PPPPPT P EPAPH A LVSATPLPPGPAAARQAS P AL P A APAPP AVPA - G P AT PG GPA 2755
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 168 VTMESSIPQASAI P VATISGQQ G H P SN L HHIMTTNVQM S IIRSNA P GP P LHIG A SH L PR gaaaaavms SSKVTTVLR P TS 247
Cdd:PHA03247 2756 RPARPPTTAGPPA P APPAAPAA G P P RR L TRPAVASLSE S RESLPS P WD P ADPP A AV L AP --------- AAALPPAAS P AG 2826
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 248 Q LP NAAT AQP AVQHLIHQ P IQ sr P PVTTSSTIP P AVVATVSATRAQSPVITTTA A HAADST L S RP TL S IQHPPS A -- AIS 325
Cdd:PHA03247 2827 P LP PPTS AQP TAPPPPPG P PP -- P SLPLGGSVA P GGDVRRRPPSRSPAAKPAAP A RPPVRR L A RP AV S RSTESF A lp PDQ 2904
330 340 350
....*....|....*....|....*....|....
gi 569003891 326 IQ RP A Q SRDVTTRITL P SH P ALGT P KQQLHTMAQ 359
Cdd:PHA03247 2905 PE RP P Q PQAPPPPQPQ P QP P PPPQ P QPPPPPPPR 2938
PHA03247
PHA03247 large tegument protein UL36; Provisional
118-512
9.72e-05
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 46.86
E-value: 9.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 118 PP AH L T PA --------- VP LSFSEGLMKP P PKPTMPS RP I AP APPSTMSL P PKVP G QVTVTMES S - I P QASAI P VATISG 187
Cdd:PHA03247 2551 PP PP L P PA appaapdrs VP PPRPAPRPSE P AVTSRAR RP D AP PQSARPRA P VDDR G DPRGPAPP S p L P PDTHA P DPPPPS 2630
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 188 QQGHPSNLHHIMTTN V QMSIIRSNA P G P P ------------ LHIG AS HL P RGAAAA A VMSS - SKV T TVLR P TSQL P NAAT 254
Cdd:PHA03247 2631 PSPAANEPDPHPPPT V PPPERPRDD P A P G rvsrprrarrlg RAAQ AS SP P QRPRRR A ARPT v GSL T SLAD P PPPP P TPEP 2710
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 255 A QP A VQHLIHQ P IQSRPPVTT S STI P P A VVATVSATRAQS P V - ITTT A AHAADSTLSR P TLSIQHPPSAAISIQ RPA QSR 333
Cdd:PHA03247 2711 A PH A LVSATPL P PGPAAARQA S PAL P A A PAPPAVPAGPAT P G g PARP A RPPTTAGPPA P APPAAPAAGPPRRLT RPA VAS 2790
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 334 DVTT R IT LPS ------ H PA LGTPKQQLHTM A QKTIFSTGT P VA A ATV AP ILATNTL P STTTA G SVSHTQAP tsti V TMTM 407
Cdd:PHA03247 2791 LSES R ES LPS pwdpad P PA AVLAPAAALPP A ASPAGPLPP P TS A QPT AP PPPPGPP P PSLPL G GSVAPGGD ---- V RRRP 2866
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 408 PS H S SH A TAVTTSNI PV AKV vpqqithts P R IQPDYPP E RSS L I P ISGH R ASPNPVAMETRNDNR P SV P V Q F Q YFL P TY P 487
Cdd:PHA03247 2867 PS R S PA A KPAAPARP PV RRL --------- A R PAVSRST E SFA L P P DQPE R PPQPQAPPPPQPQPQ P PP P P Q P Q PPP P PP P 2937
410 420
....*....|....*....|....*
gi 569003891 488 PSAY PLA AH T YTPITSSV S TIRQY P 512
Cdd:PHA03247 2938 RPQP PLA PT T DPAGAGEP S GAVPQ P 2962
Atrophin-1
pfam03154 Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...
473-849
2.37e-04
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain]
Cd Length: 991
Bit Score: 45.53
E-value: 2.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 473 P SVPV Q FQYFL P TY PP SAYPLA A H T YT P IT S SV S TIR Q - Y P VSA Q A PN S T I - TA QTGVGVAS T VH L N P MQ L MT vdashar 550
Cdd:pfam03154 172 P VLQA Q SGAAS P PS PP PPGTTQ A A T AG P TP S AP S VPP Q g S P ATS Q P PN Q T Q s TA APHTLIQQ T PT L H P QR L PS ------- 244
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 551 hiqgiq P A P ISTQGI QP A P IGTSGI QP A P ig T P GI H SAA P INTQG LQ PAAMAN Q Q P Q P E gktsavvladg ATIVAN P I S N 630
Cdd:pfam03154 245 ------ P H P PLQPMT QP P P PSQVSP QP L P -- Q P SL H GQM P PMPHS LQ TGPSHM Q H P V P P ----------- QPFPLT P Q S S 305
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 631 PFSAA P AATTVVQTH SQ SASTNT P A Q GSSPRPSIL R KK P ATDG - MAVRKTLL PP QP P DVAT P RVE S SMRSA --------- 700
Cdd:pfam03154 306 QSQVP P GPSPAAPGQ SQ QRIHTP P S Q SQLQSQQPP R EQ P LPPA p LSMPHIKP PP TT P IPQL P NPQ S HKHPP hlsgpspfq 385
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 701 -- S GS P R P AGA KP K S EV --- H VSI A T P VTVS L ETI S N Q ---- N A EQ P TVAVPPTAQQ P PPTI P SMIAAASP PSQ PAIAL - 770
Cdd:pfam03154 386 mn S NL P P P PAL KP L S SL sth H PPS A H P PPLQ L MPQ S Q Q lppp P A QP P VLTQSQSLPP P AASH P PTSGLHQV PSQ SPFPQ h 465
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 771 STI PG AV P V ----- T PP IT T IA A T P TLSA P VGGTP S T ------ VLGP P V P EIKV KEEA e PVDITR P V S TV PP LATNTVS P 839
Cdd:pfam03154 466 PFV PG GP P P itpps G PP TS T SS A M P GIQP P SSASV S S sgpvpa AVSC P L P PVQI KEEA - LDEAEE P E S PP PP PRSPSPE P 544
410
....*....|
gi 569003891 840 SLALLA S NL S 849
Cdd:pfam03154 545 TVVNTP S HA S 554
PHA03307
PHA03307 transcriptional regulator ICP4; Provisional
551-866
3.97e-03
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain]
Cd Length: 1352
Bit Score: 41.31
E-value: 3.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 551 HIQGIQ PA PISTQ G IQPA P IGT S GIQ P A P IGT P G ih S AA P INTQG L QPAAMANQQ P Q P EGKT S AVVLADGATI VA NPISN 630
Cdd:PHA03307 91 SLSTLA PA SPARE G SPTP P GPS S PDP P P P TPP P A -- S PP P SPAPD L SEMLRPVGS P G P PPAA S PPAAGASPAA VA SDAAS 168
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 631 PFS AA PAATTVVQ T HSQSA S TNTPAQG S S P RPS ilrkkpatdgmavrktl LP P Q PP DVAT P RVE S SMRS A SGSP R P A GAK 710
Cdd:PHA03307 169 SRQ AA LPLSSPEE T ARAPS S PPAEPPP S T P PAA ----------------- AS P R PP RRSS P ISA S ASSP A PAPG R S A ADD 231
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 711 PKSEVHV S IATPVTVSLETIS N QNAEQP tvavpptaqqpppti P SM I AAASPPSQPAIALSTIPGAV P VTPPITTIAAT P 790
Cdd:PHA03307 232 AGASSSD S SSSESSGCGWGPE N ECPLPR --------------- P AP I TLPTRIWEASGWNGPSSRPG P ASSSSSPRERS P 296
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 569003891 791 TL S APVG G TPSTVLG P PVPEIKVKEEAEPVDI T RPV S TVPPL A TNTVS PS LALLA S nl SMP P SDLPPGA SPRK K PR 866
Cdd:PHA03307 297 SP S PSSP G SGPAPSS P RASSSSSSSRESSSSS T SSS S ESSRG A AVSPG PS PSRSP S -- PSR P PPPADPS SPRK R PR 370
PRK14950
PRK14950 DNA polymerase III subunits gamma and tau; Provisional
761-881
4.23e-03
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain]
Cd Length: 585
Bit Score: 40.95
E-value: 4.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 761 SPPS Q PAIA L ST I PGAVPVT P PITTIAA T PTLSA PV GG TP STVLG P PVPEIKVKEEA EPV -- DI T R P VSTVP P L A TNTVS 838
Cdd:PRK14950 344 TSYG Q LPLE L AV I EALLVPV P APQPAKP T AAAPS PV RP TP APSTR P KAAAAANIPPK EPV re TA T P P PVPPR P V A PPVPH 423
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 569003891 839 PSLALLASNLSMP P S D LP P GAS P r KK P R K QQHVISTEE GD MM E 881
Cdd:PRK14950 424 TPESAPKLTRAAI P V D EK P KYT P - PA P P K EEEKALIAD GD VL E 465
PHA02732
PHA02732 hypothetical protein; Provisional
257-486
5.13e-03
hypothetical protein; Provisional
Pssm-ID: 165099 [Multi-domain]
Cd Length: 1467
Bit Score: 40.89
E-value: 5.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 257 PA V Q H L IHQPIQSRPPVTTSST -- IPP AVVA ---- TVSATR A QSPVITTTAAHA A DS T LSR P TL S IQHPPSAA IS IQ r P A 330
Cdd:PHA02732 1182 PA P Q L L SSYIPTGSVLYQDPIF ty IPP GIIG msgt NTFTFK A AQLQLSAASSPP A AT T PTP P PS S SSSSSAQS IS TS - P G 1260
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 331 Q SR ----- DV T TR I TLPSH PAL G TPK qqlhtmaqktifs T G TPV A AAT V apilatntlp STTT A GSVSHTQAPT S TIVTM 405
Cdd:PHA02732 1261 Q IQ ivlng ST T IH I NFLFF PAL S TPK ------------- I G QIL A MPI V ---------- NSSG A FISLYVNSAI S ANFNV 1317
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569003891 406 T MPSHS S HA T AVTTSNIPVAKVV P QQITHTSPRIQPDYPP E r S SLIP IS GHRASPNPV A MET RN DNRP S V P VQ F QY F L P T 485
Cdd:PHA02732 1318 T IEYVF S NG T VIKRFTDEPGQIF P LPLINGDEEVIISVEN E - S TTFN IS ANNLGSAQL A LQL RN AISA S L P GP F AF F G P I 1396
.
gi 569003891 486 Y 486
Cdd:PHA02732 1397 L 1397
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
