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Conserved domains on  [gi|568952387|ref|XP_006536266|]
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adhesion G protein-coupled receptor A1 isoform X1 [Mus musculus]

Protein Classification

G protein-coupled receptor family protein( domain architecture ID 705710)

G protein-coupled receptor family protein is a seven-transmembrane G protein-coupled receptor (7TM-GPCR) family protein which typically transmits an extracellular signal into the cell by the conformational rearrangement of the 7TM helices and by the subsequent binding and activation of an intracellular heterotrimeric G protein; GPCR ligands include light-sensitive compounds, odors, pheromones, hormones, and neurotransmitters

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tm_GPCRs super family cl28897
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
14-325 0e+00

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


The actual alignment was detected with superfamily member cd16000:

Pssm-ID: 475119 [Multi-domain]  Cd Length: 275  Bit Score: 550.71  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  14 GEFLHPVVYACTAVMLLCLLASVITYILHQSAIRISRKGRHALLNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYS 93
Cdd:cd16000    1 GEFLHPVVYACTAVMLLCLFASIITYIVHHSTIRISRKGWHMLLNFCFHTALTFAVFAGGINRTKYPIICQAVGIVLHYS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  94 TLSTMLWIGVTARNIYKQVTKKALPCPGADQPPYPKQPLLRFYLISGGVPFIICGVTAATNIRNYGTEDEDVAYCWMAWE 173
Cdd:cd16000   81 TLSTMLWIGVTARNIYKQVTKKPHLCQDTDQPPYPKQPLLRFYLVSGGVPFIICGITAATNINNYGTEDEDTPYCWMAWE 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 174 PSLGAFYGPAAFIALVTCVYFLCTYVQLRRHPERRYELRerteeqqrlavpesghrhgvrpgtpptcdalaasqlqNEHS 253
Cdd:cd16000  161 PSLGAFYGPVAFIVLVTCIYFLCTYVQLRRHPERKYELK-------------------------------------NEHS 203
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568952387 254 FKAQLRAAAFTLFLFTATWTFGALAVSQGHFLDMIFSCLYGAFCVTLGLFVLIHHCAKREDVWQCWWSCCPS 325
Cdd:cd16000  204 FKAQLRAAAFTLFLFTATWAFGALAVSQGHFLDMIFSCLYGAFCVTLGLFILIHHCAKRDDVWHCWWSCCPS 275
 
Name Accession Description Interval E-value
7tmB2_GPR123 cd16000
G protein-coupled receptor 123, member of the class B2 family of seven-transmembrane G ...
14-325 0e+00

G protein-coupled receptor 123, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR123 is an orphan receptor that has been classified as that belongs to the group III of adhesion GPCRs, and also includes orphan receptors GPR124 and GPR125. GPR123 is predominantly expressed in the CNS including thalamus, brain stem and regions containing large pyramidal cells, yet its biological function remains to be determined. Adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320666 [Multi-domain]  Cd Length: 275  Bit Score: 550.71  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  14 GEFLHPVVYACTAVMLLCLLASVITYILHQSAIRISRKGRHALLNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYS 93
Cdd:cd16000    1 GEFLHPVVYACTAVMLLCLFASIITYIVHHSTIRISRKGWHMLLNFCFHTALTFAVFAGGINRTKYPIICQAVGIVLHYS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  94 TLSTMLWIGVTARNIYKQVTKKALPCPGADQPPYPKQPLLRFYLISGGVPFIICGVTAATNIRNYGTEDEDVAYCWMAWE 173
Cdd:cd16000   81 TLSTMLWIGVTARNIYKQVTKKPHLCQDTDQPPYPKQPLLRFYLVSGGVPFIICGITAATNINNYGTEDEDTPYCWMAWE 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 174 PSLGAFYGPAAFIALVTCVYFLCTYVQLRRHPERRYELRerteeqqrlavpesghrhgvrpgtpptcdalaasqlqNEHS 253
Cdd:cd16000  161 PSLGAFYGPVAFIVLVTCIYFLCTYVQLRRHPERKYELK-------------------------------------NEHS 203
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568952387 254 FKAQLRAAAFTLFLFTATWTFGALAVSQGHFLDMIFSCLYGAFCVTLGLFVLIHHCAKREDVWQCWWSCCPS 325
Cdd:cd16000  204 FKAQLRAAAFTLFLFTATWAFGALAVSQGHFLDMIFSCLYGAFCVTLGLFILIHHCAKRDDVWHCWWSCCPS 275
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
26-296 4.58e-16

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 78.09  E-value: 4.58e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387   26 AVMLLCLLASVITYILHQSaIRISRKGRHalLNFC---FHAALTF-----TVFAGGINRTQHPILCQAVGIALHYSTLST 97
Cdd:pfam00002  13 SLSLVALLLAIAIFLLFRK-LHCTRNYIH--LNLFasfILRALLFlvgdaVLFNKQDLDHCSWVGCKVVAVFLHYFFLAN 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387   98 MLWIGVTARNIYKQVTKKALPcpgadqppyPKQPLLRFYLISGGVPFIICGVTAATNIRNYGTEDedvaYCWMAWE-PSL 176
Cdd:pfam00002  90 FFWMLVEGLYLYTLLVEVFFS---------ERKYFWWYLLIGWGVPALVVGIWAGVDPKGYGEDD----GCWLSNEnGLW 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  177 GAFYGPAAFIALVTCVYFLCTYVQLRRHperryeLRERTEEQQRLAvpesghrhgvrpgtpptcdalaasqlqnehSFKA 256
Cdd:pfam00002 157 WIIRGPILLIILVNFIIFINIVRILVQK------LRETNMGKSDLK------------------------------QYRR 200
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 568952387  257 QLRAAAFTLFLFTATWTFGALAVSQG-------HFLDMIFSCLYGAF 296
Cdd:pfam00002 201 LAKSTLLLLPLLGITWVFGLFAFNPEntlrvvfLYLFLILNSFQGFF 247
 
Name Accession Description Interval E-value
7tmB2_GPR123 cd16000
G protein-coupled receptor 123, member of the class B2 family of seven-transmembrane G ...
14-325 0e+00

G protein-coupled receptor 123, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR123 is an orphan receptor that has been classified as that belongs to the group III of adhesion GPCRs, and also includes orphan receptors GPR124 and GPR125. GPR123 is predominantly expressed in the CNS including thalamus, brain stem and regions containing large pyramidal cells, yet its biological function remains to be determined. Adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320666 [Multi-domain]  Cd Length: 275  Bit Score: 550.71  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  14 GEFLHPVVYACTAVMLLCLLASVITYILHQSAIRISRKGRHALLNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYS 93
Cdd:cd16000    1 GEFLHPVVYACTAVMLLCLFASIITYIVHHSTIRISRKGWHMLLNFCFHTALTFAVFAGGINRTKYPIICQAVGIVLHYS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  94 TLSTMLWIGVTARNIYKQVTKKALPCPGADQPPYPKQPLLRFYLISGGVPFIICGVTAATNIRNYGTEDEDVAYCWMAWE 173
Cdd:cd16000   81 TLSTMLWIGVTARNIYKQVTKKPHLCQDTDQPPYPKQPLLRFYLVSGGVPFIICGITAATNINNYGTEDEDTPYCWMAWE 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 174 PSLGAFYGPAAFIALVTCVYFLCTYVQLRRHPERRYELRerteeqqrlavpesghrhgvrpgtpptcdalaasqlqNEHS 253
Cdd:cd16000  161 PSLGAFYGPVAFIVLVTCIYFLCTYVQLRRHPERKYELK-------------------------------------NEHS 203
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568952387 254 FKAQLRAAAFTLFLFTATWTFGALAVSQGHFLDMIFSCLYGAFCVTLGLFVLIHHCAKREDVWQCWWSCCPS 325
Cdd:cd16000  204 FKAQLRAAAFTLFLFTATWAFGALAVSQGHFLDMIFSCLYGAFCVTLGLFILIHHCAKRDDVWHCWWSCCPS 275
7tmB2_GPR125 cd15999
G protein-coupled receptor 125, member of the class B2 family of seven-transmembrane G ...
15-324 2.71e-143

G protein-coupled receptor 125, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR125 is an orphan receptor that has been classified as that belongs to the group III of adhesion GPCRs, which also includes orphan receptors GPR123 and GPR124. GPR125 directly interacts with dishevelled (Dvl) via its intracellular C-terminus, and together, GPR125 and Dvl recruit a subset of planar cell polarity (PCP) components into membrane subdomains, a prerequisite for activation of Wnt/PCP signaling. Thus, GPR125 influences the noncanonical WNT/PCP pathway, which does not involve beta-catenin, through interacting with and modulating the distribution of Dvl. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320665  Cd Length: 312  Bit Score: 416.57  E-value: 2.71e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  15 EFLHPVVYACTAVMLLCLLASVITYILHQSAIRISRKGRHALLNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYST 94
Cdd:cd15999    2 DLLHPVVYATAVVLLLCLLTIIVSYIYHHSLVRISRKSWHMLVNLCFHIFLTCAVFVGGINQTRNASVCQAVGIILHYST 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  95 LSTMLWIGVTARNIYKQVTKKALPCPGADQPPYPKQPLLRFYLISGGVPFIICGVTAATNIRNYGTEdEDVAYCWMAWEP 174
Cdd:cd15999   82 LATVLWVGVTARNIYKQVTRKAKRCQDPDEPPPPPRPMLRFYLIGGGIPIIVCGITAAANIKNYGSR-PNAPYCWMAWEP 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 175 SLGAFYGPAAFIALVTCVYFLCTYVQLRRHPERRYELRERTEEQQRLAVPESGHRHGVRPGTPP-TCDALAASQLQNEHS 253
Cdd:cd15999  161 SLGAFYGPAGFIIFVNCMYFLSIFIQLKRHPERKYELKEPTEEQQRLAASEHGELNHQDSGSSSaSCSLVSTSALENEHS 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568952387 254 FKAQLRAAAFTLFLFTATWTFGALAVSQGHFLDMIFSCLYGAFCVTLGLFVLIHHCAKREDVWQCWW-SCCP 324
Cdd:cd15999  241 FQAQLLGASLALFLYVALWIFGALAVSLYYPMDLVFSCLFGATCLSLGAFLVVHHCVNREDVRRAWIaTCCP 312
7tmB2_GPR124-like_Adhesion_III cd15259
orphan GPR124 and related proteins, group III adhesion GPCRs, member of class B2 family of ...
14-323 1.54e-141

orphan GPR124 and related proteins, group III adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group III adhesion GPCRs include orphan GPR123, GPR124, GPR125, and their closely related proteins. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. GPR123 is predominantly expressed in the CNS including thalamus, brain stem and regions containing large pyramidal cells. GPR124, also known as tumor endothelial marker 5 (TEM5), is highly expressed in tumor vessels and in the vasculature of the developing embryo. GPR124 is essentially required for proper angiogenic sprouting into neural tissue, CNS-specific vascularization, and formation of the blood-brain barrier. GPR124 also interacts with the PDZ domain of DLG1 (discs large homolog 1) through its PDZ-binding motif. Recently, studies of double-knockout mice showed that GPR124 functions as a co-activator of Wnt7a/Wnt7b-dependent beta-catenin signaling in brain endothelium. Furthermore, WNT7-stimulated beta-catenin signaling is regulated by GPR124's intracellular PDZ binding motif and leucine-rich repeats (LRR) in its N-terminal extracellular domain. GPR125 directly interacts with dishevelled (Dvl) via its intracellular C-terminus, and together, GPR125 and Dvl recruit a subset of planar cell polarity (PCP) components into membrane subdomains, a prerequisite for activation of Wnt/PCP signaling. Thus, GPR125 influences the noncanonical WNT/PCP pathway, which does not involve beta-catenin, through interacting with and modulating the distribution of Dvl.


Pssm-ID: 320387 [Multi-domain]  Cd Length: 260  Bit Score: 409.84  E-value: 1.54e-141
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  14 GEFLHPVVYACTAVMLLCLLASVITYILHQSAIRISRKGRHALLNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYS 93
Cdd:cd15259    1 FELLHPVVYAGAALCLLCLLATIITYIVFHRLIRISRKGRHMLVNLCLHLLLTCVVFVGGINRTANQLVCQAVGILLHYS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  94 TLSTMLWIGVTARNIYKQVTKKALPCPGADQPPYPKQPLLRFYLISGGVPFIICGVTAATNIRNYGTEDedvaYCWMAWE 173
Cdd:cd15259   81 TLCTLLWVGVTARNMYKQVTKTAKPPQDEDQPPRPPKPMLRFYLIGWGIPLIICGITAAVNLDNYSTYD----YCWLAWD 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 174 PSLGAFYGPAAFIALVTCVYFLCTYVQLRRHPErryelrerteeqqrlavpesghrhgvrpgtpptcdalaasqlqnehS 253
Cdd:cd15259  157 PSLGAFYGPAALIVLVNCIYFLRIYCQLKGAPV----------------------------------------------S 190
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 254 FKAQLRAAAFTLFLFTATWTFGALAVSQGHFLDMIFSCLYGAFCVTLGLFVLIHHCAKREDVWQCWWSCC 323
Cdd:cd15259  191 FQSQLRGAVITLFLYVAMWACGALAVSQRYFLDLVFSCLYGATCSSLGLFVLIHHCLSREDVRQSWRQCC 260
7tmB2_GPR124 cd15998
G protein-coupled receptor 124, member of the class B2 family of seven-transmembrane G ...
14-324 2.96e-102

G protein-coupled receptor 124, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR124 is an orphan receptor that has been classified as that belongs to the group III of adhesion GPCRs, which also includes orphan GPR123 and GPR125. GPR124, also known as tumor endothelial marker 5 (TEM5), is highly expressed in tumor vessels and in the vasculature of the developing embryo. GPR124 is essentially required for proper angiogenic sprouting into neural tissue, CNS-specific vascularization, and formation of the blood-brain barrier. GPR124 interacts with the PDZ domain of DLG1 (discs large homolog 1) through its PDZ-binding motif. Recently, studies of double-knockout mice showed that GPR124 functions as a co-activator of Wnt7a/Wnt7b-dependent beta-catenin signaling in brain endothelium. Moreover, WNT7-stimulated beta-catenin signaling is regulated by GPR124's intracellular PDZ binding motif and leucine-rich repeats (LRR) in its N-terminal extracellular domain. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320664 [Multi-domain]  Cd Length: 268  Bit Score: 309.96  E-value: 2.96e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  14 GEFLHPVVYACTAVMLLCLLASVITYILHQSAIRISRKGRHALLNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYS 93
Cdd:cd15998    1 GAGLHPVVYPCTALLLLCLFSTIITYILNHSSIHVSRKGWHMLLNLCFHIAMTSAVFAGGITLTNYQMVCQAVGITLHYS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  94 TLSTMLWIGVTARNIYKQVTKKALPCPGADQPPYPKQPLLRFYLISGGVPFIICGVTAATNIRNYgteDEDVAYCWMAWE 173
Cdd:cd15998   81 SLSTLLWMGVKARVLHKELTWRAPPPQEGDPALPTPRPMLRFYLIAGGIPLIICGITAAVNIHNY---RDHSPYCWLVWR 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 174 PSLGAFYGPAAFIALVTCVYFLCTYVQLRrhperryelrerteeqqrlavpesghrhgvrpGTPPTCDALaasqlqneHS 253
Cdd:cd15998  158 PSLGAFYIPVALILLVTWIYFLCAGLHLR--------------------------------GPSADGDSV--------YS 197
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568952387 254 FKAQLRAAAFTLFLFTATWTFGALAVSQGHFLDMIFSCLYGAFCVTLGLFVLIHHCAKREDVWQCWWSCCP 324
Cdd:cd15998  198 PGVQLGALVTTHFLYLAMWACGALAVSQRWLPRVVCSCLYGVAASALGLFVFTHHCARRRDVRASWRACCP 268
7tmB2_Adhesion cd15040
adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G ...
17-319 4.64e-57

adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G protein-coupled receptors; The B2 subfamily of class B GPCRs consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320168 [Multi-domain]  Cd Length: 253  Bit Score: 192.02  E-value: 4.64e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  17 LHPVVYACTAVMLLCLLASVITYILHQSAIRisRKGRHALLNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYSTLS 96
Cdd:cd15040    4 LSIITYIGCGLSLLGLLLTIITYILFRKLRK--RKPTKILLNLCLALLLANLLFLFGINSTDNPVLCTAVAALLHYFLLA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  97 TMLWIGVTARNIYKQVTKKAlpcpgadqPPYPKQPLLRFYLISGGVPFIICGVTAATNIRNYGTEDEdvaYCWMAWE-PS 175
Cdd:cd15040   82 SFMWMLVEALLLYLRLVKVF--------GTYPRHFILKYALIGWGLPLIIVIITLAVDPDSYGNSSG---YCWLSNGnGL 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 176 LGAFYGPAAFIALVTCVYFLCTYVQLRRHPERRyelreRTEEQQrlavpesghrhgvrpgtpptcdalaasqlqnehSFK 255
Cdd:cd15040  151 YYAFLGPVLLIILVNLVIFVLVLRKLLRLSAKR-----NKKKRK---------------------------------KTK 192
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568952387 256 AQLRAAAFTLFLFTATWTFGALAVSQGHfldMIFSCLYGAFCVTLGLFVLIHHCAKREDVWQCW 319
Cdd:cd15040  193 AQLRAAVSLFFLLGLTWIFGILAIFGAR---VVFQYLFAIFNSLQGFFIFIFHCLRNKEVRKAW 253
7tm_classB cd13952
class B family of seven-transmembrane G protein-coupled receptors; The class B of ...
17-319 2.78e-41

class B family of seven-transmembrane G protein-coupled receptors; The class B of seven-transmembrane GPCRs is classified into three major subfamilies: subfamily B1 (secretin-like receptor family), B2 (adhesion family), and B3 (Methuselah-like family). The class B receptors have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi or prokaryotes. The B1 subfamily comprises receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the subfamily B1 receptors preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The subfamily B2 consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Furthermore, the subfamily B3 includes Methuselah (Mth) protein, which was originally identified in Drosophila as a GPCR affecting stress resistance and aging, and its closely related proteins.


Pssm-ID: 410627 [Multi-domain]  Cd Length: 260  Bit Score: 149.67  E-value: 2.78e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  17 LHPVVYACTAVMLLCLLASVITYILHQSAIRISRKgrhALLNFCFHAALTFTVFAGGINRT--QHPILCQAVGIALHYST 94
Cdd:cd13952    4 LSIITYIGCSLSLVGLLLTIITYLLFPKLRNLRGK---ILINLCLSLLLAQLLFLIGQLLTssDRPVLCKALAILLHYFL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  95 LSTMLWIGVTARNIYKQVTKKalpcpgadQPPYPKQPLLRFYLISGGVPFIICGVTAATNIRNYGTEDE-DVAYCWM-AW 172
Cdd:cd13952   81 LASFFWMLVEAFDLYRTFVKV--------FGSSERRRFLKYSLYGWGLPLLIVIITAIVDFSLYGPSPGyGGEYCWLsNG 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 173 EPSLGAFYGPAAFIALVTCVYFLCTYVQLRRHperryeLRERTEEQQRlavpesghrhgvrpgtpptcdalaasqlqneH 252
Cdd:cd13952  153 NALLWAFYGPVLLILLVNLVFFILTVRILLRK------LRETPKQSER-------------------------------K 195
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568952387 253 SFKAQLRAAAFTLFLFTATWTFGALAVSQGhfLDMIFSCLYGAFCVTLGLFVLIHHCAKREDVWQCW 319
Cdd:cd13952  196 SDRKQLRAYLKLFPLMGLTWIFGILAPFVG--GSLVFWYLFDILNSLQGFFIFLIFCLKNKEVRRLL 260
7tmB2_CELSR_Adhesion_IV cd15441
cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 ...
20-323 4.81e-25

cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuron migration and axon guidance in the CNS.


Pssm-ID: 320557 [Multi-domain]  Cd Length: 254  Bit Score: 104.26  E-value: 4.81e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  20 VVYACTAVMLLCLLASVITYILhQSAIRISRKGRHALLNFC-FHAALTFTVfagGINRTQHPILCQAVGIALHYSTLSTM 98
Cdd:cd15441    7 VTYIGIGISLVLLVIAFLVLSC-LRGLQSNSNSIHKNLVAClLLAELLFLL---GINQTENLFPCKLIAILLHYFYLSAF 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  99 LWIGVTARNIYKQVTKKALpcpgADQPPypkqplLRFY-LISGGVPFIICGVTAATNIRNYGTEDedvaYCWM-AWEPSL 176
Cdd:cd15441   83 SWLLVESLHLYRMLTEPRD----INHGH------MRFYyLLGYGIPAIIVGLSVGLRPDGYGNPD----FCWLsVNETLI 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 177 GAFYGPAAFIALVTCVYF---LCTYVQLRRHpERRYElrerteeqqrlavpesghrhgvrpgtpptcdalaasqlqnehS 253
Cdd:cd15441  149 WSFAGPIAFVIVITLIIFilaLRASCTLKRH-VLEKA------------------------------------------S 185
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 254 FKAQLRAAAFTLFLFTATWTFGALAVSQGhflDMIFSCLYGAFCVTLGLFVLIHHCAKREDVWQCWWSCC 323
Cdd:cd15441  186 VRTDLRSSFLLLPLLGATWVFGLLAVNED---SELLHYLFAGLNFLQGLFIFLFYCIFNKKVRRELKNAL 252
7tmB2_CELSR1 cd15991
Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of ...
17-315 2.95e-22

Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320657 [Multi-domain]  Cd Length: 254  Bit Score: 96.45  E-value: 2.95e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  17 LHPVVYACTAVMLLCLLasvITYILhQSAIRISRKGRHALLNFCFhAALTFT--VFAGGINRTQHPILCQAVGIALHYST 94
Cdd:cd15991    4 LKIITYTTVSLSLVALL---ITFIL-LVLIRTLRSNLHSIHKNLV-AALFFSelIFLIGINQTENPFVCTVVAILLHYFY 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  95 LSTMLWIGVTARNIYKQVTKkalpCPGADQPPypkqplLRFYLISG-GVPFIICGVTAATNIRNYGTEDedvaYCWMAWE 173
Cdd:cd15991   79 MSTFAWMFVEGLHIYRMLTE----VRNINTGH------MRFYYVVGwGIPAIITGLAVGLDPQGYGNPD----FCWLSVQ 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 174 PSL-GAFYGPAAFIALVTCVYF-LCTYVQLRRhperryelRERTEEqqrlavpesghRHGVrpgtpptcdalaasqlqne 251
Cdd:cd15991  145 DTLiWSFAGPIGIVVIINTVIFvLAAKASCGR--------RQRYFE-----------KSGV------------------- 186
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568952387 252 hsfKAQLRAAAFTLFLFTATWTFGALAVSQG----HFLDMIFSCLYgafcvtlGLFVLIHHCAKREDV 315
Cdd:cd15991  187 ---ISMLRTAFLLLLLISATWLLGLMAVNSDtlsfHYLFAIFSCLQ-------GIFIFFFHCIFNKEV 244
7tmB2_latrophilin-like_invertebrate cd15440
invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane ...
22-315 1.17e-21

invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; This subgroup includes latrophilin-like proteins that are found in invertebrates such as insects and worms. Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of vertebrate latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320556 [Multi-domain]  Cd Length: 259  Bit Score: 94.64  E-value: 1.17e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  22 YACTAVMLLCLLASVITYILHQSaIRISRKGRHAllNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYSTLSTMLWI 101
Cdd:cd15440    9 YIGCIISIVCLLLAFITFTCFRN-LQCDRNTIHK--NLCLCLLIAEIVFLLGIDQTENRTLCGVIAGLLHYFFLAAFSWM 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 102 GVTARNIYKQVTKkalpcpgADQPPYPKQPLlrFYLISGGVPFIICGVTAATNIRNYGTEDedvaYCWMAWE-PSLGAFY 180
Cdd:cd15440   86 LLEGFQLYVMLVE-------VFEPEKSRIKW--YYLFGYGLPALIVAVSAGVDPTGYGTED----HCWLSTEnGFIWSFV 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 181 GPAAFIALVTCVYFLCTYVQLRRHPERRYELRErteeqqrlavpesghrhgvrpgtpptcdalaASQLQNehsFKAQLRA 260
Cdd:cd15440  153 GPVIVVLLANLVFLGMAIYVMCRHSSRSASKKD-------------------------------ASKLKN---IRGWLKG 198
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 568952387 261 AAFTLFLFTATWTFGALAVSQGH-FLDMIFSCLYgafcvTL-GLFVLIHHCAKREDV 315
Cdd:cd15440  199 SIVLVVLLGLTWTFGLLFINQESiVMAYIFTILN-----SLqGLFIFIFHCVLNEKV 250
7tmB2_GPR133-like_Adhesion_V cd15933
orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of ...
20-315 6.91e-21

orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group V adhesion GPCRs include orphan receptors GPR133, GPR144, and closely related proteins. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the G(s) protein, leading to activation of adenylate cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320599 [Multi-domain]  Cd Length: 252  Bit Score: 92.39  E-value: 6.91e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  20 VVYACTAVMLLCLLASVITYILhqsaIRISRKGR---HAllNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYSTLS 96
Cdd:cd15933    7 ISYIGCGISIACLALTLIIFLV----LRVLSSDRfqiHK--NLCVALLLAQILLLAGEWAEGNKVACKVVAILLHFFFMA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  97 TMLWIGVTARNIYKQVTKkalpcpgadqpPYPKQPLLRFYLISG-GVPFIICGVTAATNIRNYGTEdedvAYCWMA---- 171
Cdd:cd15933   81 AFSWMLVEGLHLYLMIVK-----------VFNYKSKMRYYYFIGwGLPAIIVAISLAILFDDYGSP----NVCWLSlddg 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 172 --WepslgAFYGPAAFIALVTCVYFLCTyvqlrrhperryeLRERTEEQQRLAVPesghrhgvrpgtpptcdalaasQLQ 249
Cdd:cd15933  146 liW-----AFVGPVIFIITVNTVILILV-------------VKITVSLSTNDAKK----------------------SQG 185
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568952387 250 NEHSFKAQLRAAAFTLFLFTATWTFGALAV-SQGHFLDMIFSCLYGafcvTLGLFVLIHHCAKREDV 315
Cdd:cd15933  186 TLAQIKSTAKASVVLLPILGLTWLFGVLVVnSQTIVFQYIFVILNS----LQGLMIFLFHCVLNSEV 248
7tmB2_CD97 cd15438
CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
26-323 1.93e-18

CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320554 [Multi-domain]  Cd Length: 261  Bit Score: 85.20  E-value: 1.93e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  26 AVMLLCLLASVITYILHQSaIRISRKGRHalLNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYSTLSTMLWIGVTA 105
Cdd:cd15438   13 SVSLFCLFLCILTFLFCRS-IRGTRNTIH--LHLCLSLFLAHLIFLLGINNTNNQVACAVVAGLLHYFFLAAFCWMSLEG 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 106 RNIYKQVTKKalpcpgadqppYPKQPLLRFYLISG--GVPFIICGVTAATNIRNYGTEDedvaYCWMAWEPS-LGAFYGP 182
Cdd:cd15438   90 VELYLMVVQV-----------FNTQSLKKRYLLLIgyGVPLVIVAISAAVNSKGYGTQR----HCWLSLERGfLWSFLGP 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 183 AAFIALVTCVYFLCTYvqlrrhperrYELRERTEEqqrlavpesghrhgVRPGTPptcdalaasQLQNEHSFKAqlrAAA 262
Cdd:cd15438  155 VCLIILVNAIIFVITV----------WKLAEKFSS--------------INPDME---------KLRKIRALTI---TAI 198
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568952387 263 FTLFLFTATWTFGALAVSQGhflDMIFSCLYGAFCVTLGLFVLIHHC----AKREDVWQCWWSCC 323
Cdd:cd15438  199 AQLCILGCTWIFGFFQFSDS---TLVMSYLFTILNSLQGLFIFLLHCllskQVREEYSRWLCAIA 260
7tmB3_Methuselah-like cd15039
Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G ...
17-223 4.13e-17

Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G protein-coupled receptors; The subfamily B3 of class B GPCRs consists of Methuselah (Mth) and its closely related proteins found in bilateria. Mth was originally identified in Drosophila as a GPCR affecting stress resistance and aging. In addition to the seven transmembrane helices, Mth contains an N-terminal extracellular domain involved in ligand binding, and a third intracellular loop (IC3) required for the specificity of G-protein coupling. Drosophila Mth mutants showed an increase in average lifespan by 35% and greater resistance to a variety of stress factors, including starvation, high temperature, and paraquat-induced oxidative toxicity. Moreover, mutations in two endogenous peptide ligands of Methuselah, Stunted A and B, showed an increased in lifespan and resistance to oxidative stress induced by dietary paraquat. These results strongly suggest that the Stunted-Methuselah system plays important roles in stress response and aging.


Pssm-ID: 410632 [Multi-domain]  Cd Length: 270  Bit Score: 81.50  E-value: 4.13e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  17 LHPVVYACTAVMLLCLLASVITYILHQSairiSRK--GRhALLNFCFHAALTFTVFA-GGINRTQHPILCQAVGIALHYS 93
Cdd:cd15039    4 LGILTLIGLIISLVFLLLTLAVYALLPE----LRNlhGK-CLMCLVLSLFVAYLLLLiGQLLSSGDSTLCVALGILLHFF 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  94 TLSTMLWIGVTARNIYKQVTKKALPCPGADqppyPKQPLLRFYLISGGVPFIICGVTAATN--------IRNYGTEdedv 165
Cdd:cd15039   79 FLAAFFWLNVMSFDIWRTFRGKRSSSSRSK----ERKRFLRYSLYAWGVPLLLVAVTIIVDfspntdslRPGYGEG---- 150
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568952387 166 aYCWM--AWePSLGAFYGPAAFIALVTCVYFLCTYVQLRRHP-ERRYELRERTEEQQRLAV 223
Cdd:cd15039  151 -SCWIsnPW-ALLLYFYGPVALLLLFNIILFILTAIRIRKVKkETAKVQSRLRSDKQRFRL 209
7tmB2_CELSR3 cd15993
Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of ...
15-323 5.23e-17

Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuronal migration and axon guidance in the CNS. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320659 [Multi-domain]  Cd Length: 254  Bit Score: 81.04  E-value: 5.23e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  15 EFLHPVVYACTAVMLLCLLASViTYILHQSAIRISRKGRHAllNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYST 94
Cdd:cd15993    2 ETLAIVTYSSVSASLAALVLTF-SVLTCLRGLKSNTRGIHS--NIAAALFLSELLFLLGINRTENQFLCTVVAILLHYFF 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  95 LSTMLWIGVTARNIYKQVTKKALPCPGAdqppypkqplLRFYLISG-GVPFIICGVTAATNIRNYGTEDedvaYCWMA-W 172
Cdd:cd15993   79 LSTFAWLFVQGLHIYRMQTEARNVNFGA----------MRFYYAIGwGVPAIITGLAVGLDPEGYGNPD----FCWISiH 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 173 EPSLGAFYGPAAFIALVTCVYFLCTYvqlrrhperryelrerteeqqrlavpesghRHGVRPGTPPTcdalaasqlqNEH 252
Cdd:cd15993  145 DKLVWSFAGPIVVVIVMNGVMFLLVA------------------------------RMSCSPGQKET----------KKT 184
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568952387 253 SFKAQLRAAAFTLFLFTATWTFGALAVSQGHfldMIFSCLYGAFCVTLGLFVLIHHCAKREDVWQCWWSCC 323
Cdd:cd15993  185 SVLMTLRSSFLLLLLISATWLFGLLAVNNSV---LAFHYLHAILCCLQGLAVLLLFCVLNEEVQEAWKLAC 252
7tmB2_Latrophilin_Adhesion_I cd15252
Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of ...
29-322 1.51e-16

Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; Group I adhesion GPCRs consist of latrophilins (also called lectomedins or latrotoxin receptors) and ETL (EGF-TM7-latrophilin-related protein. These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320380 [Multi-domain]  Cd Length: 257  Bit Score: 79.86  E-value: 1.51e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  29 LLCLLASVITYILHqSAIRISRKGRHAllNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYSTLSTMLWIGVTARNI 108
Cdd:cd15252   16 LVCLAICIFTFWFF-RGLQSDRTTIHK--NLCISLFLAELVFLIGINTTTNKIFCSVIAGLLHYFFLAAFAWMFIEGIQL 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 109 YKQVTKKAlpcpgadqppYPKQPLLR-FYLISGGVPFIICGVTAATNIRNYGTEDedvaYCWMAWEPS-LGAFYGPAAFI 186
Cdd:cd15252   93 YLMLVEVF----------ENEGSRHKnFYIFGYGSPAVIVGVSAALGYRYYGTTK----VCWLSTENYfIWSFIGPATLI 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 187 ALVTCVYFLCTYVQLRRHPErryelrerteeqqrLAVPESGhrhgvrpgtpptCDAlaasqlqnehSFKAQLRAAAFTLF 266
Cdd:cd15252  159 ILLNLIFLGVAIYKMFRHTA--------------GLKPEVS------------CLE----------NIRSWARGAIALLF 202
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 568952387 267 LFTATWTFGALAVSQGhflDMIFSCLYGAFCVTLGLFVLIHHCAKREDVWQCWWSC 322
Cdd:cd15252  203 LLGLTWIFGVLHINHA---SVVMAYLFTVSNSLQGMFIFLFHCVLSRKVRKEYYKL 255
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
26-296 4.58e-16

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 78.09  E-value: 4.58e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387   26 AVMLLCLLASVITYILHQSaIRISRKGRHalLNFC---FHAALTF-----TVFAGGINRTQHPILCQAVGIALHYSTLST 97
Cdd:pfam00002  13 SLSLVALLLAIAIFLLFRK-LHCTRNYIH--LNLFasfILRALLFlvgdaVLFNKQDLDHCSWVGCKVVAVFLHYFFLAN 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387   98 MLWIGVTARNIYKQVTKKALPcpgadqppyPKQPLLRFYLISGGVPFIICGVTAATNIRNYGTEDedvaYCWMAWE-PSL 176
Cdd:pfam00002  90 FFWMLVEGLYLYTLLVEVFFS---------ERKYFWWYLLIGWGVPALVVGIWAGVDPKGYGEDD----GCWLSNEnGLW 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  177 GAFYGPAAFIALVTCVYFLCTYVQLRRHperryeLRERTEEQQRLAvpesghrhgvrpgtpptcdalaasqlqnehSFKA 256
Cdd:pfam00002 157 WIIRGPILLIILVNFIIFINIVRILVQK------LRETNMGKSDLK------------------------------QYRR 200
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 568952387  257 QLRAAAFTLFLFTATWTFGALAVSQG-------HFLDMIFSCLYGAF 296
Cdd:pfam00002 201 LAKSTLLLLPLLGITWVFGLFAFNPEntlrvvfLYLFLILNSFQGFF 247
7tmB2_Latrophilin-1 cd16007
Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled ...
15-322 2.44e-15

Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320673 [Multi-domain]  Cd Length: 258  Bit Score: 76.11  E-value: 2.44e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  15 EFLHPVVYACTAVMLLCLLASVITYILHQSAIRISRKGRHAllNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYST 94
Cdd:cd16007    1 ELLLSVITWVGIVISLVCLAICISTFCFLRGLQTDRNTIHK--NLCINLFLAELLFLIGIDKTQYQIACPIFAGLLHFFF 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  95 LSTMLWIGVTARNIYKQVTKkalpcpgADQPPYPKQpllRFYLISGGV-PFIICGVTAATNIRNYGTEDEdvayCWMAWE 173
Cdd:cd16007   79 LAAFSWLCLEGVQLYLMLVE-------VFESEYSRK---KYYYLCGYCfPALVVGISAAIDYRSYGTEKA----CWLRVD 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 174 PS-LGAFYGPAAFIALVTCVYFLCTYVQLRRhperryelrerteeQQRLAVPESghrhgvrpgtpptcdalaaSQLQNeh 252
Cdd:cd16007  145 NYfIWSFIGPVSFVIVVNLVFLMVTLHKMIR--------------SSSVLKPDS-------------------SRLDN-- 189
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 253 sFKAQLRAAAFTLFLFTATWTFGALAVSQGhflDMIFSCLYGAFCVTLGLFVLIHHCAKREDVWQCWWSC 322
Cdd:cd16007  190 -IKSWALGAITLLFLLGLTWAFGLLFINKE---SVVMAYLFTTFNAFQGMFIFIFHCALQKKVHKEYSKC 255
7tmB2_GPR133 cd15256
orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G ...
17-315 5.96e-15

orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR133 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR144. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320384 [Multi-domain]  Cd Length: 260  Bit Score: 74.96  E-value: 5.96e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  17 LHPVVYACTAVMLLCLLASVITYILHQS--AIRISRKGRHALLNFCFHAALTFTVFAGGINRTQHPilCQAVGIALHYST 94
Cdd:cd15256    4 LSSITYVGCSLSIFCLAITLVTFAVLSSvsTIRNQRYHIHANLSFAVLVAQILLLISFRFEPGTLP--CKIMAILLHFFF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  95 LSTMLWIGVTARNIYKQVTKkalpCPGADQPPYpkqplLRFYLISGGVPFIICGVTAATNIRNYGTEDEdvayCWMAWEP 174
Cdd:cd15256   82 LSAFAWMLVEGLHLYSMVIK----VFGSEESKH-----FYYYGIGWGSPLLICIISLTSALDSYGESDN----CWLSLEN 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 175 -SLGAFYGPAAFIALVTCVYFLCTYVQLRRHPERRYELrerteeqqrlavpesghrHGvrpgtpptcdalaasqlqNEHS 253
Cdd:cd15256  149 gAIWAFVAPALFVIVVNIGILIAVTRVISRISADNYKV------------------HG------------------DANA 192
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568952387 254 FKAQLRAAAFTLFLFTATWTFGALAVSqGHFLdmIFSCLYGAFCVTLGLFVLIHHCAKREDV 315
Cdd:cd15256  193 FKLTAKAVAVLLPILGSSWVFGVLAVN-THAL--VFQYMFAIFNSLQGFFIFLFHCLLNSEV 251
7tmB2_EMR cd15439
epidermal growth factor-like module-containing mucin-like hormone receptors, member of the ...
26-204 3.10e-14

epidermal growth factor-like module-containing mucin-like hormone receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4) and the leukocyte cell-surface antigen CD97, are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying number of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of EMR2, alternative splicing results in four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320555 [Multi-domain]  Cd Length: 263  Bit Score: 73.14  E-value: 3.10e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  26 AVMLLCLLASVITYILHQSaIRISRKGRHALLNFC-FHAALTFTVfagGINRTQHPILCQAVGIALHYSTLSTMLWIGVT 104
Cdd:cd15439   13 IISLLCLFLAILTFLLCRS-IRNTSTSLHLQLSLClFLADLLFLV---GIDRTDNKVLCSIIAGFLHYLFLACFAWMFLE 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 105 ARNIYKQVTK-KALPCPGADQppyPKQPLLrfYLISGGVPFIICGVTAATNIRNYGTEDedvaYCWMAWEPS-LGAFYGP 182
Cdd:cd15439   89 AVHLFLTVRNlKVVNYFSSHR---FKKRFM--YPVGYGLPAVIVAISAAVNPQGYGTPK----HCWLSMEKGfIWSFLGP 159
                        170       180
                 ....*....|....*....|..
gi 568952387 183 AAFIALVTCVYFLCTYVQLRRH 204
Cdd:cd15439  160 VCVIIVINLVLFCLTLWILREK 181
7tmB2_BAI2 cd15988
brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 ...
19-315 3.33e-13

brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320654 [Multi-domain]  Cd Length: 291  Bit Score: 70.37  E-value: 3.33e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  19 PVVYACtAVMLLCLLASVITYILHQSAIRISRKgrHALLNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYSTLSTM 98
Cdd:cd15988    7 PLMIGC-AVSCMALLILLAIYAAFWRFIRSERS--IILLNFCLSILASNILILVGQSQTLSKGVCTMTAAFLHFFFLSSF 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  99 LWIGVTARNIYKQVTKKAlpcpgadqppypKQPLL--RFYLISGGVPFIICGVTAA-TNIRNYGTEdedvAYCWMAWEPS 175
Cdd:cd15988   84 CWVLTEAWQSYLAVIGRM------------RTRLVrkRFLCLGWGLPALVVAVSVGfTRTKGYGTA----SYCWLSLEGG 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 176 -LGAFYGPAAFIALVTCVYFLCTYVQLRrhpeRRYELRERTeEQQRLAVPESGHRHGVRPGTppTCDALAASQLQN--EH 252
Cdd:cd15988  148 lLYAFVGPAAVIVLVNMLIGIIVFNKLM----SRDGISDKS-KKQRAGSEAEPCSSLLLKCS--KCGVVSSAAMSSatAS 220
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568952387 253 SFKAQLRAAAFTLFLFTATWTFGALAVSQGHflDMIFSCLYGAFCVTLGLFVLIHHCAKREDV 315
Cdd:cd15988  221 SAMASLWSSCVVLPLLALTWMSAVLAMTDRR--SILFQVLFAVFNSVQGFVIITVHCFLRREV 281
7tmB2_Latrophilin-3 cd16005
Latrophilin-3, member of the class B2 family of seven-transmembrane G protein-coupled ...
29-322 3.85e-13

Latrophilin-3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320671 [Multi-domain]  Cd Length: 258  Bit Score: 69.59  E-value: 3.85e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  29 LLCLLASVITYILHQsAIRISRKGRHAllNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYSTLSTMLWIGVTARNI 108
Cdd:cd16005   16 LVCLLICIFTFCFFR-GLQSDRNTIHK--NLCISLFVAELLFLIGINRTDQPIACAVFAALLHFFFLAAFTWMFLEGVQL 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 109 YKQVTKkalpcpgADQPPYPKQPLlrFYLISGGVPFIICGVTAATNIRNYGTEdedvAYCWMAWEPS-LGAFYGPAAFIA 187
Cdd:cd16005   93 YIMLVE-------VFESEHSRRKY--FYLVGYGMPALIVAVSAAVDYRSYGTD----KVCWLRLDTYfIWSFIGPATLII 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 188 LVTCVYFLCTYVQLRRHPErryelrerteeqqrLAVPESGhrhgvrpgtpptCdalaasqlqnEHSFKAQLRAAAFTLFL 267
Cdd:cd16005  160 MLNVIFLGIALYKMFHHTA--------------ILKPESG------------C----------LDNIKSWVIGAIALLCL 203
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 568952387 268 FTATWTFGALAVSQGhflDMIFSCLYGAFCVTLGLFVLIHHCAKREDVWQCWWSC 322
Cdd:cd16005  204 LGLTWAFGLMYINES---TVIMAYLFTIFNSLQGMFIFIFHCVLQKKVRKEYGKC 255
7tmB2_ETL cd15437
Epidermal Growth Factor, latrophilin and seven transmembrane domain-containing protein 1; ...
27-309 4.65e-13

Epidermal Growth Factor, latrophilin and seven transmembrane domain-containing protein 1; member of the class B2 family of seven-transmembrane G protein-coupled receptors; ETL (EGF-TM7-latrophilin-related protein) belongs to Group I adhesion GPCRs, which also include latrophilins (also called lectomedins or latrotoxin receptors). All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. ETL, for instance, contains EGF-like repeats, which also present in other EGF-TM7 adhesion GPCRs, such as Cadherin EGF LAG seven-pass G-type receptors (CELSR1-3), EGF-like module receptors (EMR1-3), CD97, and Flamingo. ETL is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320553 [Multi-domain]  Cd Length: 258  Bit Score: 69.52  E-value: 4.65e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  27 VMLLCLLASVITYILHqSAIRISRKGRHAllNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYSTLSTMLWIGVTAR 106
Cdd:cd15437   14 ISLICLSMCIFTFWFF-SEIQSTRTTIHK--NLCCSLFLAELIFLIGINMNANKLFCSIIAGLLHYFFLAAFAWMCIEGI 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 107 NIYKQVTKKAlpcpgadqppYPKQPLLR-FYLISGGVPFIICGVTAATNIRNYGTEDedvaYCWMAWEPS-LGAFYGPAA 184
Cdd:cd15437   91 HLYLIVVGVI----------YNKGFLHKnFYIFGYGSPAVVVGISAALGYKYYGTTK----VCWLSTENNfIWSFIGPAC 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 185 FIALVTCVYFLCTYVQLRRHPErryelrerteeqqrLAVPESGHRHGVRpgtppTCdalaasqlqnehsfkaqLRAAAFT 264
Cdd:cd15437  157 LIILVNLLAFGVIIYKVFRHTA--------------MLKPEVSCYENIR-----SC-----------------ARGALAL 200
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 568952387 265 LFLFTATWTFGALAVSQGHFLDMIFSCLYGAFcvtLGLFVLIHHC 309
Cdd:cd15437  201 LFLLGATWIFGVLHVVYGSVVTAYLFTISNAF---QGMFIFIFLC 242
7tmB2_Latrophilin-2 cd16006
Latrophilin-2, member of the class B2 family of seven-transmembrane G protein-coupled ...
26-322 5.66e-13

Latrophilin-2, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320672 [Multi-domain]  Cd Length: 258  Bit Score: 69.17  E-value: 5.66e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  26 AVMLLCLLASVITYILHQsAIRISRKGRHAllNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYSTLSTMLWIGVTA 105
Cdd:cd16006   13 VISLVCLAICIFTFCFFR-GLQSDRNTIHK--NLCINLFIAEFIFLIGIDKTEYKIACPIFAGLLHFFFLAAFAWMCLEG 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 106 RNIYKQVTKkalpcpgADQPPYPKQpllRFYLISGG-VPFIICGVTAATNIRNYGTEDEdvayCWMAWEPS-LGAFYGPA 183
Cdd:cd16006   90 VQLYLMLVE-------VFESEYSRK---KYYYVAGYlFPATVVGVSAAIDYKSYGTEKA----CWLRVDNYfIWSFIGPV 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 184 AFIALVTCVYFLCTYVQLRRhperryelrerteeqqrlavpesgHRHGVRPGTpptcdalaaSQLQNehsFKAQLRAAAF 263
Cdd:cd16006  156 TFIILLNLIFLVITLCKMVK------------------------HSNTLKPDS---------SRLEN---IKSWVLGAFA 199
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 568952387 264 TLFLFTATWTFGALAVSQGhflDMIFSCLYGAFCVTLGLFVLIHHCAKREDVWQCWWSC 322
Cdd:cd16006  200 LLCLLGLTWSFGLLFINEE---TIVMAYLFTIFNAFQGMFIFIFHCALQKKVRKEYSKC 255
7tmB2_Latrophilin cd15436
Latrophilins, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
27-322 7.56e-13

Latrophilins, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320552 [Multi-domain]  Cd Length: 258  Bit Score: 68.67  E-value: 7.56e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  27 VMLLCLLASVITYILhQSAIRISRKGRHAllNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYSTLSTMLWIGVTAR 106
Cdd:cd15436   14 ISLVCLLICIFTFCF-FRGLQTDRNTIHK--NLCINLFIAELLFLIGINRTQYTIACPIFAGLLHFFFLAAFCWLCLEGV 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 107 NIYKQVTKkalpcpgADQPPYPKQPLlrFYLISGGVPFIICGVTAATNIRNYGTEDEdvayCWMAWEPS-LGAFYGPAAF 185
Cdd:cd15436   91 QLYLLLVE-------VFESEYSRRKY--FYLCGYSFPALVVAVSAAIDYRSYGTEKA----CWLRVDNYfIWSFIGPVTF 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 186 IALVTCVYFLCTYVQLRRHPErryelrerteeqqrlAVPESGHRHgvrpgtpptcdalaasqlqneHSFKAQLRAAAFTL 265
Cdd:cd15436  158 VITLNLVFLVITLHKMVSHSD---------------LLKPDSSRL---------------------DNIKSWALGAIALL 201
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 568952387 266 FLFTATWTFGALAVSQGhflDMIFSCLYGAFCVTLGLFVLIHHCAKREDVWQCWWSC 322
Cdd:cd15436  202 FLLGLTWSFGLMFINEE---SVVMAYLFTIFNAFQGVFIFIFHCALQKKVRKEYSKC 255
7tmB2_EMR_Adhesion_II cd15931
EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of ...
16-202 4.42e-12

EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. On the other hand, EMR2 generates four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320597 [Multi-domain]  Cd Length: 262  Bit Score: 66.38  E-value: 4.42e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  16 FLHPVVYACTAVMLLCLLASVITYILHQSaIRISRKGRHalLNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYSTL 95
Cdd:cd15931    3 FLEWINRVGVIVSLFCLGLAIFTFLLCRW-IPKINTTAH--LHLCLCLSMSHTLFLAGIEYVENELACTVMAGLLHYLFL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  96 STMLWIGVTARNIYKQVTKKALPCPGADQppypKQPLLRFYLISGGVPFIICGVTAATNIRNYGTEDedvaYCWMAWEPS 175
Cdd:cd15931   80 ASFVWMLLEALQLHLLVRRLTKVQVIQRD----GLPRPLLCLIGYGVPFLIVGVSALVYSDGYGEAK----MCWLSQERG 151
                        170       180
                 ....*....|....*....|....*...
gi 568952387 176 -LGAFYGPAAFIALVTCVYFLCTYVQLR 202
Cdd:cd15931  152 fNWSFLGPVIAIIGINWILFCATLWCLR 179
7tmB2_CELSR2 cd15992
Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of ...
20-296 1.54e-10

Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320658  Cd Length: 255  Bit Score: 61.76  E-value: 1.54e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  20 VVYACTAVMLLCLLASvityILHQSAIRISRKGRHALL-NFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYSTLSTM 98
Cdd:cd15992    7 LTWSSVGVTLGFLLLT----FLFLLCLRALRSNKTSIRkNGATALFLSELVFILGINQADNPFACTVIAILLHFFYLCTF 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  99 LWIGVTARNIYKQVTKKALPCPGadqppypkqPLLRFYLISGGVPFIICGVTAATNIRNYGTEDedvaYCWMAWEPSL-G 177
Cdd:cd15992   83 SWLFLEGLHIYRMLSEVRDINYG---------PMRFYYLIGWGVPAFITGLAVGLDPEGYGNPD----FCWLSIYDTLiW 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 178 AFYGPAAFIalVTCVYFLctyvqlrrhperrYELRERTEeqqrlavpESGHRHGVRPGTPPTcdalaasqlqnehsfkAQ 257
Cdd:cd15992  150 SFAGPVAFA--VSMNVFL-------------YILSSRAS--------CSAQQQSFEKKKGPV----------------SG 190
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 568952387 258 LRAAAFTLFLFTATWTFGALAVSQG----HFLDMIFSCLYGAF 296
Cdd:cd15992  191 LRTAFTVLLLVSVTCLLALLSVNSDvilfHYLFAGFNCLQGPF 233
7tmB2_BAI3 cd15989
brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 ...
30-315 2.34e-10

brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320655 [Multi-domain]  Cd Length: 293  Bit Score: 62.01  E-value: 2.34e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  30 LCLLASVITYILHQSAIRISRKGRHALL-NFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYSTLSTMLWIGVTARNI 108
Cdd:cd15989   16 LSCLALITLAVVYAALWRYIRSERSIILiNFCLSIISSNILILVGQTQTHNKGICTMTTAFLHFFFLASFCWVLTEAWQS 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 109 YKQVTKKAlpcpgadqppypKQPLL--RFYLISGGVPFIICGVTAA-TNIRNYGTEDedvaYCWMAWEPS-LGAFYGPAA 184
Cdd:cd15989   96 YMAVTGKI------------RTRLIrkRFLCLGWGLPALVVAISMGfTKAKGYGTPH----YCWLSLEGGlLYAFVGPAA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 185 FIALVTCVYFLCTYVQL-RRHPERRYELRERTEEqqrLAVPESGHRHGVRPGTPPTCDALAASQLQNEhsfKAQLRAAAF 263
Cdd:cd15989  160 AVVLVNMVIGILVFNKLvSRDGILDKKLKHRAGQ---MSEPHSGLTLKCAKCGVVSTTALSATTASNA---MASLWSSCV 233
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 568952387 264 TLFLFTATWTFGALAVSQGHflDMIFSCLYGAFCVTLGLFVLIHHCAKREDV 315
Cdd:cd15989  234 VLPLLALTWMSAVLAMTDKR--SILFQILFAVFDSLQGFVIVMVHCILRREV 283
7tmB2_BAI_Adhesion_VII cd15251
brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 ...
19-192 1.36e-09

brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediate direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320379  Cd Length: 253  Bit Score: 58.80  E-value: 1.36e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  19 PVVYACtAVMLLCLLASVITYILHQSAIRISRKgrHALLNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYSTLSTM 98
Cdd:cd15251    7 TLIVGC-GVSCLALLTLLAIYAAFWRYIRSERS--IILINFCLSIISSNILILVGQTQTLNKGVCTMTAAFLHFFFLSSF 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  99 LWIGVTARNIYKQVTKKAlpcpgadqppypKQPLL--RFYLISGGVPFIICGVTAA-TNIRNYGTEDedvaYCWMAWEPS 175
Cdd:cd15251   84 CWVLTEAWQSYMAVTGRM------------RTRLIrkRFLCLGWGLPALVVAVSVGfTRTKGYGTSS----YCWLSLEGG 147
                        170
                 ....*....|....*...
gi 568952387 176 -LGAFYGPAAFIALVTCV 192
Cdd:cd15251  148 lLYAFVGPAAAVVLVNMV 165
7tmB2_GPR126 cd15996
orphan adhesion receptor GPR126, member of the class B2 family of seven-transmembrane G ...
82-319 1.54e-08

orphan adhesion receptor GPR126, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR126 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR64, GPR97, GPR112, and GPR114. GPR126 is required in Schwann cells for proper differentiation and myelination via G-Protein Activation. GPR126 is believed to couple to G(s)-protein, which leads to activation of adenylate cyclase for cAMP production. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320662  Cd Length: 271  Bit Score: 56.05  E-value: 1.54e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  82 LCQAVGIALHYSTLSTMLWIGVTARNIYKQVTKKAlpcpgadqPPYPKQPLLRFYLISGGVPFIICGVTAATN----IRN 157
Cdd:cd15996   69 LCITVAVLLHFFLLATFTWMGLEAIHMYIALVKVF--------NTYIRRYILKFCIIGWGLPALIVSIVLASTndnyGYG 140
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 158 YGTEDED----VAYCWMAwEPSLgaFY----GPAAFIALVTCVYFLCTYVQLrrhperryelrerteeqqrlavpesGHR 229
Cdd:cd15996  141 YYGKDKDgqggDEFCWIK-NPVV--FYvtcaAYFGIMFLMNVAMFIVVMVQI-------------------------CGR 192
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 230 HGVRpgtppTCDALAASQLQNehsfkaqLRAAAFTLFLFTATWTFGALAVSQghfLDMIFSCLYGAFCVTLGLFVLIHHC 309
Cdd:cd15996  193 NGKR-----SNRTLREEILRN-------LRSVVSLTFLLGMTWGFAFFAWGP---VNLAFMYLFTIFNSLQGLFIFVFHC 257
                        250
                 ....*....|
gi 568952387 310 AKREDVWQCW 319
Cdd:cd15996  258 ALKENVQKQW 267
7tmB2_GPR64 cd15444
orphan adhesion receptor GPR64 and related proteins, member of subfamily B2 of the class B ...
82-319 3.25e-08

orphan adhesion receptor GPR64 and related proteins, member of subfamily B2 of the class B secretin-like receptors of seven-transmembrane G protein-coupled receptors; GPR64 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR97, GPR112, GPR114, and GPR126. GPR64 is mainly expressed in the epididymis of male reproductive tract, and targeted deletion of GPR64 causes sperm stasis and efferent duct blockage due to abnormal fluid reabsorption, resulting in male infertility. GPR64 is also over-expressed in Ewing's sarcoma (ES), as well as upregulated in other carcinomas from kidney, prostate or lung, and promotes invasiveness and metastasis in ES via the upregulation of placental growth factor (PGF) and matrix metalloproteinase (MMP) 1. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320560 [Multi-domain]  Cd Length: 271  Bit Score: 55.22  E-value: 3.25e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  82 LCQAVGIALHYSTLSTMLWIGVTARNIYKQVTKKAlpcpgadqPPYPKQPLLRFYLISGGVPFIICGVTAATNIRNYG-- 159
Cdd:cd15444   70 LCISVAVFLHYFLLVSFTWMGLEAFHMYLALVKVF--------NTYIRKYILKFCIVGWGVPAVVVAIVLAVSKDNYGlg 141
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 160 ------TEDEDvAYCWMAWEPslgAFY----GPAAFIALVTCVYFLCTYVQLRRHPERRyelrerteeqqrlavpesghR 229
Cdd:cd15444  142 sygkspNGSTD-DFCWINNNI---VFYitvvGYFCVIFLLNISMFIVVLVQLCRIKKQK--------------------Q 197
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 230 HGVRPGTpptcdalaasQLQNehsfkaqLRAAAFTLFLFTATWTFGALAVSQGhflDMIFSCLYGAFCVTLGLFVLIHHC 309
Cdd:cd15444  198 LGAQRKT----------SLQD-------LRSVAGITFLLGITWGFAFFAWGPV---NLAFMYLFAIFNTLQGFFIFIFYC 257
                        250
                 ....*....|
gi 568952387 310 AKREDVWQCW 319
Cdd:cd15444  258 VAKENVRKQW 267
7tmB2_BAI1 cd15990
brain-specific angiogenesis inhibitor 1, a group VII adhesion GPCR, member of the class B2 ...
21-315 6.03e-08

brain-specific angiogenesis inhibitor 1, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320656  Cd Length: 267  Bit Score: 54.23  E-value: 6.03e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  21 VYACTAVMLLCLLASVITYILHQSAIrisrkgrhALLNFCFHAALTFTVFAGGINRTQHPILCQAVGIALHYSTLSTMLW 100
Cdd:cd15990   17 VSSLTLLLLIIIYVSVWRYIRSERSV--------ILINFCLSIISSNALILIGQTQTRNKVVCTLVAAFLHFFFLSSFCW 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 101 IGVTARNIYKQVTKKAlpcpgadqppypKQPLL--RFYLISGGVPFIICGVTAA-TNIRNYGTededVAYCWMAWEPS-L 176
Cdd:cd15990   89 VLTEAWQSYMAVTGRL------------RNRIIrkRFLCLGWGLPALVVAISVGfTKAKGYGT----VNYCWLSLEGGlL 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 177 GAFYGPAAFIALVTCVYFLCTYVQLRRHperryelrerteeqqrlavpesghrhgvrpgtpptcDALAASQLQNEHSfkA 256
Cdd:cd15990  153 YAFVGPAAAVVLVNMVIGILVFNKLVSK------------------------------------DGITDKKLKERAG--A 194
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 568952387 257 QLRAAAFTLFLFTATWTFGALAVSQGHflDMIFSCLYGAFCVTLGLFVLIHHCAKREDV 315
Cdd:cd15990  195 SLWSSCVVLPLLALTWMSAVLAITDRR--SALFQILFAVFDSLEGFVIVMVHCILRREV 251
7tmB2_GPR126-like_Adhesion_VIII cd15258
orphan GPR126 and related proteins, group VIII adhesion GPCRs, member of the class B2 family ...
17-319 1.52e-07

orphan GPR126 and related proteins, group VIII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Group VIII adhesion GPCRs include orphan GPCRs such as GPR56, GPR64, GPR97, GPR112, GPR114, and GPR126. GPR56 is involved in the regulation of oligodendrocyte development and myelination in the central nervous system via coupling to G(12/13) proteins, which leads to the activation of RhoA GTPase. GPR126, on the other hand, is required for Schwann cells, but not oligodendrocyte myelination in the peripheral nervous system. Gpr64 is mainly expressed in the epididymis of male reproductive tract, and targeted deletion of GPR64 causes sperm stasis and efferent duct blockage due to abnormal fluid reabsorption, resulting in male infertility. GPR64 is also over-expressed in Ewing's sarcoma (ES), as well as upregulated in other carcinomas from kidney, prostate or lung, and promotes invasiveness and metastasis in ES via the upregulation of placental growth factor (PGF) and matrix metalloproteinase (MMP) 1. GPR97 is identified as a lymphatic adhesion receptor that is specifically expressed in lymphatic endothelium, but not in blood vascular endothelium, and is shown to regulate migration of lymphatic endothelial cells via the small GTPases RhoA and cdc42. GPR112 is specifically expressed in normal enterochromatin cells and gastrointestinal neuroendocrine carcinoma cells, but its biological function is unknown. GPR114 is mainly found in granulocytes (polymorphonuclear leukocytes), and GPR114-transfected cells induced an increase in cAMP levels via coupling to G(s) protein. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320386 [Multi-domain]  Cd Length: 267  Bit Score: 52.80  E-value: 1.52e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  17 LHPVVYACTAVMLLCLLASVITYILHqSAIRISRKGRHALLNFCFHAALTF--TVF--AGGINRTQHPILCQAVGIALHY 92
Cdd:cd15258    1 LHILTFISYVGCGISAIFLAITILTY-IAFRKLRRDYPSKIHMNLCAALLLlnLAFllSSWIASFGSDGLCIAVAVALHY 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  93 STLSTMLWIGVTARNIYKQVTKKAlpcpgadqPPYPKQPLLRFYLISGGVPFIICGVTAATNIRNYGT----EDEDVAYC 168
Cdd:cd15258   80 FLLACLTWMGLEAFHLYLLLVKVF--------NTYIRRYILKLCLVGWGLPALLVTLVLSVRSDNYGPitipNGEGFQND 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 169 WMAWEPSLGAFY----GPAAFIALVTCVYFLCTYVQLRRhperryeLRERTEEQQRLAVpesghrhgvrpgtpptcdala 244
Cdd:cd15258  152 SFCWIRDPVVFYitvvGYFGLTFLFNMVMLATVLVQICR-------LREKAQATPRKRA--------------------- 203
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 245 asqLQNehsfkaqLRAAAFTLFLFTATW-----TFGALAVSQgHFLDMIFSCLYgafcvtlGLFVLIHHCAKREDVWQCW 319
Cdd:cd15258  204 ---LHD-------LLTLLGLTFLLGLTWglaffAWGPFNLPF-LYLFAIFNSLQ-------GFFIFIWYCSMKENVRKQW 265
7tmB2_GPR128 cd15257
orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G ...
36-200 2.25e-06

orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR128 is an orphan receptor of the adhesion family (subclass B2) that belongs to the class B GPCRs. Expression of GPR128 was detected in the mouse intestinal mucosa and is thought to be involved in energy balance, as its knockout mice showed a decrease in body weight gain and an increase in intestinal contraction frequency compared to wild-type controls. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320385 [Multi-domain]  Cd Length: 303  Bit Score: 49.87  E-value: 2.25e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  36 VITyILHQSAIRISRKGR--HALLNFCFHAALTFTVFAGGINRT--------------QHPIL-----------CQAVGI 88
Cdd:cd15257   20 VIT-IIFHLHTRKLRKSSvtWVLLNLCSSLLLFNIIFTSGVENTnndyeistvpdretNTVLLseeyvepdtdvCTAVAA 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  89 ALHYSTLSTMLWIGVTARNIYKQVTKKALPCPGadqppypkQPLLRFYLISGGVPFIICGVTAATNIR----------NY 158
Cdd:cd15257   99 LLHYFLLVTFMWNAVYSAQLYLLLIRMMKPLPE--------MFILQASAIGWGIPAVVVAITLGATYRfptslpvftrTY 170
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 568952387 159 GTEDedvaYCWMAW--------EPSLGAFYGPAAFIaLVTCVYFLCTYVQ 200
Cdd:cd15257  171 RQEE----FCWLAAldknfdikKPLLWGFLLPVGLI-LITNVILFIMTSQ 215
7tmB2_GPR112 cd15997
Probable G protein-coupled receptor 112, member of the class B2 family of seven-transmembrane ...
82-319 4.31e-06

Probable G protein-coupled receptor 112, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR112 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR64, GPR97, GPR114, and GPR126. GPR112 is specifically expressed in normal enterochromatin cells and gastrointestinal neuroendocrine carcinoma cells, but its biological function is unknown. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320663  Cd Length: 269  Bit Score: 48.50  E-value: 4.31e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  82 LCQAVGIALHYSTLSTMLWIGVTARNIYKQVTKKAlpcpgadqPPYPKQPLLRFYLISGGVPFIICGVTAATNIRNYGTE 161
Cdd:cd15997   69 LCITVAAFLHYFLLASFTWMGLEAVHMYFALVKVF--------NIYIPNYILKFCIAGWGIPAVVVALVLAINKDFYGNE 140
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 162 ------DEDVAYCWMAwepSLGAFY----GPAAFIALVTCVYFLCTYVQLRRhperryelrerteeqqrlaVPESGHRHG 231
Cdd:cd15997  141 lssdslHPSTPFCWIQ---DDVVFYisvvAYFCLIFLCNISMFITVLIQIRS-------------------MKAKKPSRN 198
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 232 VRPGTpptcdalaasqLQNehsfkaqLRAAAFTLFLFTATWTFGALAVSQGHFLDM-IFSclygaFCVTL-GLFVLIHHC 309
Cdd:cd15997  199 WKQGF-----------LHD-------LKSVASLTFLLGLTWGFAFFAWGPVRIFFLyLFS-----ICNTLqGFFIFVFHC 255
                        250
                 ....*....|
gi 568952387 310 AKREDVWQCW 319
Cdd:cd15997  256 LMKENVRKQW 265
7tmB2_GPR144 cd15255
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
32-194 1.04e-04

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR144 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR133. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320383 [Multi-domain]  Cd Length: 263  Bit Score: 44.46  E-value: 1.04e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  32 LLASVITYILHQSA--IRISRKGRHALLNFCFHAALTFTVFAGGINRTQhpILCQAVGIALHYSTLSTMLWIGVTARNIY 109
Cdd:cd15255   16 LCALIVTFILFLAVgvPKSERTTVHKNLIFALAAAEFLLMFSEWAKGNQ--VACWAVTALLHLFFLAAFSWMLVEGLLLW 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 110 KQVTKKALPcpgadqppypKQPLLRFYLISG-GVPFIICGVTAATNIRNYGTEdedvAYCWMAWEPS-LGAFYGPAAFIA 187
Cdd:cd15255   94 SKVVAVNMS----------EDRRMKFYYVTGwGLPVVIVAVTLATSFNKYVAD----QHCWLNVQTDiIWAFVGPVLFVL 159

                 ....*...
gi 568952387 188 LV-TCVYF 194
Cdd:cd15255  160 TVnTFVLF 167
7tmE_cAMP_R_Slime_mold cd14940
slime mold cyclic AMP receptor, member of the class E family of seven-transmembrane G ...
81-204 4.23e-04

slime mold cyclic AMP receptor, member of the class E family of seven-transmembrane G protein-coupled receptors; This family represents the class E of seven-transmembrane G-protein coupled receptors found in soil-living amoebas, commonly referred to as slime molds. The class E family includes cAMP receptors (cAR1-4) and cAMP receptors-like proteins (CrlA-C) from Dictyostelium discoideum, and their highly homologous cAMP receptors (TasA and TasB) from Polysphondylium pallidum. So far, four subtypes of cAMP receptors (cAR1-4) have been identified that play an essential role in the detection and transmit of the periodic extracellular cAMP waves that regulate chemotactic cell movement during Dictyostelium development, from the unicellular amoeba aggregate into many multicellular slugs and then differentiate into a sporocarp, a fruiting body with cells specialized for different functions. These four subtypes differ in their expression levels and patterns during development. cAR1 is high-affinity receptor that is the first one to be expressed highly during early aggregation and continues to be expressed at low levels during later developmental stages. cAR1 detects extracellular cAMP and is coupled to G-alpha2 protein. Cells lacking cAR1 fail to aggregate, demonstrating that cAR1 is responsible for aggregation. During later aggregation the high-affinity cAR3 receptor is expressed at low levels. Nonetheless, cells lacking cAR3 do not show an obviously altered pattern of development and are still able to aggregate into fruiting bodies. In contrast, cAR2 and cAR4 are low affinity receptors expressed predominantly after aggregation in pre-stalk cells. cAR2 is essential for normal tip formation and deletion of the receptor arrests development at the mound stage. On the other hand, CAR4 regulates axial patterning and cellular differentiation, and deletion of the receptor results in defects during culmination. Furthermore, three cAMP receptor-like proteins (CrlA-C) were identified in Dictyostelium that show limited sequence similarity to the cAMP receptors. Of these CrlA is thought to be required for normal cell growth and tip formation in developing aggregates.


Pssm-ID: 320094 [Multi-domain]  Cd Length: 256  Bit Score: 42.34  E-value: 4.23e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  81 ILCQAVGIALHYSTLSTMLWIGVTARNIYKQVTKKAlpcpgadqpPYPKQPLLRFYLISGGVPFIICGVTAATNIrnYGT 160
Cdd:cd14940   66 FLCYLYAIVITYGSLSCWLWTLCLAISIYLLIVKRE---------PEPEKFEKYYHFVCWGLPLISTIIMLIKHH--YGP 134
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 568952387 161 EdedVAYCWMAWEPS---LGAFYGPAAFIALVTCVYFLCTYVQLRRH 204
Cdd:cd14940  135 V---GNWCWIGNQYTgyrFGLFYGPFFIIFGISAVLVGLTSHYTYQV 178
7tmB2_GPR97 cd15442
orphan adhesion receptor GPR97, member of the class B2 family of seven-transmembrane G ...
35-199 1.18e-03

orphan adhesion receptor GPR97, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR97 is an orphan receptor that has been classified into the group VIII of adhesion GPCRs. Other members of the Group VII include GPR56, GPR64, GPR112, GPR114, and GPR126. GPR97 is identified as a lymphatic adhesion receptor that is specifically expressed in lymphatic endothelium, but not in blood vascular endothelium, and is shown to regulate migration of lymphatic endothelial cells via the small GTPases RhoA and cdc42. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320558 [Multi-domain]  Cd Length: 277  Bit Score: 40.94  E-value: 1.18e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387  35 SVITYILHqSAIRISRKGRHALLNFCFHAALTFTVF--------AGGINRTQHPILCQAVGIALHYSTLSTMLWIGVTAR 106
Cdd:cd15442   19 LIFTIILY-FFLRFTYQKFKSEDAPKIHVNLSSSLLllnlafllNSGVSSRAHPGLCKALGGVTHYFLLCCFTWMAIEAF 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568952387 107 NIYKQVTKKAlpcpgadqPPYPKQPLLRFYLISGGVPFIICGVTAATNIRN-YGTEDED----VAYCWMAwEPSLGAFYg 181
Cdd:cd15442   98 HLYLLAIKVF--------NTYIHHYFAKLCLVGWGFPALVVTITGSINSYGaYTIMDMAnrttLHLCWIN-SKHLTVHY- 167
                        170
                 ....*....|....*...
gi 568952387 182 paafiaLVTCVYFLCTYV 199
Cdd:cd15442  168 ------ITVCGYFGLTFL 179
7tmB2_GPR56 cd15995
orphan adhesion receptor GPR56, member of the class B2 family of seven-transmembrane G ...
83-159 2.48e-03

orphan adhesion receptor GPR56, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR56 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR64, GPR97, GPR112, GPR114, and GPR126. GPR56 is involved in the regulation of oligodendrocyte development and myelination in the central nervous system via coupling to G(12/13) proteins, which leads to the activation of RhoA GTPase. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320661  Cd Length: 269  Bit Score: 40.20  E-value: 2.48e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568952387  83 CQAVGIALHYSTLSTMLWIGVTARNIYKQVTKKAlpcpgadqPPYPKQPLLRFYLISGGVPFIICGVTAATNIRNYG 159
Cdd:cd15995   70 CRAGGMFLHFSLLACLTWMGIEGYNLYRLVVEVF--------NTYVPHFLLKLCAVGWGLPIFLVTLIFLVDQDNYG 138
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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