|
Name |
Accession |
Description |
Interval |
E-value |
| COG5139 |
COG5139 |
Uncharacterized conserved protein [Function unknown]; |
533-782 |
1.05e-28 |
|
Uncharacterized conserved protein [Function unknown];
Pssm-ID: 227468 Cd Length: 397 Bit Score: 119.42 E-value: 1.05e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 533 DFEMMLQRKKSMSGKRRRNRDGGTFISDADDVVSAMIVKMNEAAEEDRQLNNQKKPALKKLTLLPAVVMHLKKQDLKETF 612
Cdd:COG5139 126 ELGDTGDRQLKAPAASRARRKEDLLEQTVDEISLRLKKRMQDAAKKDNANNLEGRPATGKIKNLPEVSDVLMKKALQDTI 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 613 IDSGVMSAIKEWLSPLPDRSLPALKIREELLKILQELPsVSQETLKHSGIGRAVMYLYKHPKESRSNKDMAGKLINEWSR 692
Cdd:COG5139 206 LDNNILDSVRGWLEPLPDKSLPNIKIQKSLLDVLKTLP-IHTEHLVESGVGRIVYFYTISKKEEKEVRRSAKALVQEWTR 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 693 PIFGLTSNYKGmTREEREQRDLEQMPQRRRMNSTGGQTpRRDLEKVLTGEEKALRPGDPGFCARARV---PMPSNKDYVV 769
Cdd:COG5139 285 PIIKPSGNYRD-KRIMQLEFDSEKLRKKSVMDSAKNRK-KKSSGEDPTSRGSSVQTLYEQAAARRNRaaaPAQTTTDYKY 362
|
250
....*....|...
gi 578804572 770 RPkwnVEMESSRP 782
Cdd:COG5139 363 AP---VSNLSAVP 372
|
|
| Med26 |
pfam08711 |
TFIIS helical bundle-like domain; Mediator is a large complex of up to 33 proteins that is ... |
641-694 |
4.37e-12 |
|
TFIIS helical bundle-like domain; Mediator is a large complex of up to 33 proteins that is conserved from plants to fungi to humans - the number and representation of individual subunits varying with species {1-2]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Mediator exists in two major forms in human cells: a smaller form that interacts strongly with pol II and activates transcription, and a large form that does not interact strongly with pol II and does not directly activate transcription. Notably, the 'small' and 'large' Mediator complexes differ in their subunit composition: the Med26 subunit preferentially associates with the small, active complex, whereas cdk8, cyclin C, Med12 and Med13 associate with the large Mediator complex. This family includesthe C terminal region of a number of eukaryotic hypothetical proteins which are homologous to the Saccharomyces cerevisiae protein IWS1. IWS1 is known to be an Pol II transcription elongation factor and interacts with Spt6 and Spt5.
Pssm-ID: 462573 [Multi-domain] Cd Length: 52 Bit Score: 61.38 E-value: 4.37e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 578804572 641 ELLKILQELPsVSQETLKHSGIGRAVMYLYKHPkESRSNKDMAGKLINEWSRPI 694
Cdd:pfam08711 1 KLLKKLEKLP-VTLELLKSTGIGKVVNKLRKHK-ENPEIKKLAKELVKKWKRLV 52
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
11-371 |
2.06e-10 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 64.55 E-value: 2.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 11 QDPPEEDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSverhseNETSDREdglpkghhvTDSENDEPlnlNASDSESE 90
Cdd:NF033609 546 EQPDEPGEIEPIPEDSDSDPGSDSGSDSSNSDSGSDSGS------DSTSDSG---------SDSASDSD---SASDSDSA 607
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 91 ElhrqkDSDSESEERAeppASDSENEDVNQHGSDSESEETrklpgSDSENEELLNGHASDSENEDVGKHPASDSEIEELQ 170
Cdd:NF033609 608 S-----DSDSASDSDS---ASDSDSASDSDSASDSDSASD-----SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 674
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 171 KSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESEelpkpqvSDSESEEPPRHQASDSENEELPKP 250
Cdd:NF033609 675 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD-------SDSDSDSDSDSDSDSDSDSDSDSD 747
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 251 RISDSESEDPPRHQASDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVSDSESEGPQKgpaSDSETEDASRHKQ 330
Cdd:NF033609 748 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDS 824
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 578804572 331 KPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKKFHSSDSE 371
Cdd:NF033609 825 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDSE 865
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
9-300 |
5.53e-07 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 53.37 E-value: 5.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 9 SDQDPPEEDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSVERHSENETSDRE-DGLPKGHHVTDSENDEPLNLNASDS 87
Cdd:NF033609 608 SDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDsDSDSDSDSDSDSDSDSDSDSDSDSD 687
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 88 ESEELHRQKDSDSESEERAEpPASDSENEDVNQHGSDSESE-ETRKLPGSDSENEELLNGHASDSENEDVGKHPASDSEI 166
Cdd:NF033609 688 SDSDSDSDSDSDSDSDSDSD-SDSDSDSDSDSDSDSDSDSDsDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 766
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 167 EELQKSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESEELPKPQvSDSESEEPPRHQASDSENEE 246
Cdd:NF033609 767 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD-SDSDSDSDSDSDSDSDSDSD 845
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 578804572 247 LPKPRISDSESEDPPRHQASDSENEELPKPRISDSESEDPPRNQASDSEnEELP 300
Cdd:NF033609 846 SDSDSDSDSDSESDSNSDSESGSNNNVVPPNSPKNGTNASNKNEAKDSK-EPLP 898
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
206-533 |
1.08e-06 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 52.60 E-value: 1.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 206 EEPPKPRMSDSESEELPKPQVSDSEseePPRHQASDSENEELPKPRISDSESeDPPRHQASDSENEElPKPRISDSESeD 285
Cdd:NF033609 540 DKPVVPEQPDEPGEIEPIPEDSDSD---PGSDSGSDSSNSDSGSDSGSDSTS-DSGSDSASDSDSAS-DSDSASDSDS-A 613
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 286 PPRNQASDSENEElPKPRVSDSESEGPQKGpASDSETEDASRHKQKPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKKF 365
Cdd:NF033609 614 SDSDSASDSDSAS-DSDSASDSDSASDSDS-DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 691
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 366 HSSDSEEEEHKKQKMDSDEDEKEGEEEKVAKRKAAVLSDSEDEEKASAKKSRVVSDADDSDSDAVSDKSGKREKTIASDS 445
Cdd:NF033609 692 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 771
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 446 EEEAGKELSDKKNEEKDLFGSDSESGNEEENLIADIFGESGDEEEEEFTGFNQEDLEEEKGETQVKEAEDSDSDDNIKRG 525
Cdd:NF033609 772 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 851
|
....*...
gi 578804572 526 KHMDFLSD 533
Cdd:NF033609 852 SDSDSESD 859
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
128-476 |
1.69e-06 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 51.83 E-value: 1.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 128 EETRKLPGSDSeneellnghASDSENEDVGKHPASDSEIEELQKSPASDSETEDALKPQISDSESEEpprHQASDSENEE 207
Cdd:NF033609 559 EDSDSDPGSDS---------GSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDS---DSASDSDSAS 626
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 208 PpkprmSDSESEelpkpqvSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQASDSENEELPKPRISDSESE-DP 286
Cdd:NF033609 627 D-----SDSASD-------SDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDsDS 694
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 287 PRNQASDSENEelpkprvSDSESEgpqkgpaSDSETEDASRHKQKPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKKFH 366
Cdd:NF033609 695 DSDSDSDSDSD-------SDSDSD-------SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 760
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 367 SSDSEEEEHKKQKMDSDEDEKEGeeekvakrkaavlSDSEDEEKASAKKSRVVSDADDSDSDAVSDKSGKREKTIASDSE 446
Cdd:NF033609 761 DSDSDSDSDSDSDSDSDSDSDSD-------------SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 827
|
330 340 350
....*....|....*....|....*....|.
gi 578804572 447 EEAGKEL-SDKKNEEKDLFGSDSESGNEEEN 476
Cdd:NF033609 828 SDSDSDSdSDSDSDSDSDSDSDSDSDSDSES 858
|
|
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
84-357 |
3.60e-06 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 50.56 E-value: 3.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 84 ASDSESEELHRQKDSDSESEEraeppasDSENEDVNQHGSDSESEETRKLPGSDSENEELLNGHASDSEN--EDVGKHPA 161
Cdd:PRK08581 28 DDPQKDSTAKTTSHDSKKSND-------DETSKDTSSKDTDKADNNNTSNQDNNDKKFSTIDSSTSDSNNiiDFIYKNLP 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 162 SDSEIEELQKSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESEelpkpQVSDSESEEPPRHQASD 241
Cdd:PRK08581 101 QTNINQLLTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNSEKSTNDSNKNSDSSIK-----NDTDTQSSKQDKADNQK 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 242 SENEELPKPRISDSESEDPPRHQASDSEneelpkpriSDSESEDPPRNQASDSENEEL---PKPRVSDSESEGPQKGPAS 318
Cdd:PRK08581 176 APSSNNTKPSTSNKQPNSPKPTQPNQSN---------SQPASDDTANQKSSSKDNQSMsdsALDSILDQYSEDAKKTQKD 246
|
250 260 270
....*....|....*....|....*....|....*....
gi 578804572 319 DSETEDASRHKQKPESDDDSDRENKGEDTEMQNDSFHSD 357
Cdd:PRK08581 247 YASQSKKDKTETSNTKNPQLPTQDELKHKSKPAQSFEND 285
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
9-321 |
3.99e-06 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 50.68 E-value: 3.99e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 9 SDQDPPEEDDGGAtpvQDERDSGSDGEDDVNEQHSGSDTGSVERHSENETSDREDGLPKGHHVTDSENDEPLNLNASDSE 88
Cdd:NF033609 602 SDSDSASDSDSAS---DSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 678
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 89 SEELHRQKDSDSESEERAEPPA-SDSENEDVNQHGSDSESEETRKlpgSDSENEELLNGHASDSENEDVGKHPASDSEIE 167
Cdd:NF033609 679 DSDSDSDSDSDSDSDSDSDSDSdSDSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 755
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 168 ELQKSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESEelpkpqvSDSESEepprhQASDSENEEL 247
Cdd:NF033609 756 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD-------SDSDSD-----SDSDSDSDSD 823
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 578804572 248 PKpriSDSESEDPPRHQASDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVSDSESEGPQKGPASDSE 321
Cdd:NF033609 824 SD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDSESGSNNNVVPPNSPKNGTNASNKNEAKDSK 894
|
|
| Ebola_NP |
pfam05505 |
Ebola nucleoprotein; This family consists of Ebola and Marburg virus nucleoproteins. These ... |
47-298 |
2.93e-05 |
|
Ebola nucleoprotein; This family consists of Ebola and Marburg virus nucleoproteins. These proteins are responsible for encapsidation of genomic RNA. It has been found that nucleoprotein DNA vaccines can offer protection from the virus.
Pssm-ID: 398905 Cd Length: 717 Bit Score: 47.81 E-value: 2.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 47 TGSVERHSENETSdredglpkGHHVTDSENDEPLNLNASDSESEelhrQKDSDSESEERAEPPASDSENEdvNQHGSDSE 126
Cdd:pfam05505 388 TEAITAASLPKTS--------GHYDDDDDIPFPGPINDDDNPGH----QDDDPTDSQDTTIPDVVVDPDD--GSYGEYQS 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 127 SEETrklpGSDSENEELLNGhaSDSENEDVGKHPASDSEIEELQKSPASDSETEDALKPQISDSESEEPPR--HQASDSE 204
Cdd:pfam05505 454 YSEN----GMNAPDDLVLLN--EDEDDLEDTKPVPNRSTKGGQQKNSQKGQHIEGRQTQSRPIQNVPGPHRtiHHASAPL 527
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 205 NEEPPKPRMSDSESEELPKPQvsdseSEEPPRHQASDSENEELPkPRISDSESED-------------PPRHQASDSENE 271
Cdd:pfam05505 528 TDNDRRNEPSGSTSPRMLTPI-----NEEADPLDDADDETSSLP-PLESDDEEQDrdgtsnrtptvapPAPVYRDHSEKK 601
|
250 260
....*....|....*....|....*..
gi 578804572 272 ELPKPRISDSESEDPPRNQASDSENEE 298
Cdd:pfam05505 602 ELPQDEQQDQDHTQEARNQDSDNTQSE 628
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
16-208 |
1.30e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 45.76 E-value: 1.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 16 EDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSVERHSENETSDREDGLPKGHHVTDSENDEPLNLNASDSESEELHRQ 95
Cdd:TIGR00927 707 KGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAG 786
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 96 KDSDSESEERAEPP--ASDSENEDVNQHGSDSESEETRKLPGSDSENEELLNGHASDSENEDvgkhpasDSEIEELQKSP 173
Cdd:TIGR00927 787 EDGEMKGDEGAEGKveHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQD-------EKGVDGGGGSD 859
|
170 180 190
....*....|....*....|....*....|....*
gi 578804572 174 ASDSETEDALKPQISDSESEEPPRHQaSDSENEEP 208
Cdd:TIGR00927 860 GGDSEEEEEEEEEEEEEEEEEEEEEE-EEEENEEP 893
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
245-520 |
5.19e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 43.83 E-value: 5.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 245 EELPKPRISDSESEDPPRHQASDSENE-ELPKPRISDSESEdPPRNQASDSENE---ELPKPRVSDSESEGPQKGPASDS 320
Cdd:TIGR00927 628 GDLSKGDVAEAEHTGERTGEEGERPTEaEGENGEESGGEAE-QEGETETKGENEsegEIPAERKGEQEGEGEIEAKEADH 706
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 321 ETEDASRHKQ-----KPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKKFHSSDSEEEEHKKQKMDSDEDekegeeekva 395
Cdd:TIGR00927 707 KGETEAEEVEhegetEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKE---------- 776
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 396 krkaavlSDSEDEEKASAKKSRVVSDADDSDSDAVSDKSGKREKTIASDSEEEAGKELSDKKNEEKDLFGSDSESGNEEE 475
Cdd:TIGR00927 777 -------DEDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDE 849
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 578804572 476 NLIADifGESGDEEEEEFTGFNQEDLEEEKGETQVKEAEDSDSDD 520
Cdd:TIGR00927 850 KGVDG--GGGSDGGDSEEEEEEEEEEEEEEEEEEEEEEEEEENEE 892
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
258-535 |
1.26e-03 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 42.59 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 258 EDPPRHQASDSENEELPKPRISDSeseDPPRNQASDSENEELPKPRVSDSESEgpqKGPASDSETEDASRHKQKPESDDD 337
Cdd:NF033609 540 DKPVVPEQPDEPGEIEPIPEDSDS---DPGSDSGSDSSNSDSGSDSGSDSTSD---SGSDSASDSDSASDSDSASDSDSA 613
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 338 SDRENKGEDTEMQNDSFHSDSHMDRKKFHSSDSEEEEHKKQKMDSDEDEKegeeekvakrkaavlSDSEDEEKASAKKSR 417
Cdd:NF033609 614 SDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSD---------------SDSDSDSDSDSDSDS 678
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 418 VVSDADDSDSDAVSDKSGKREKTIASDSEEEAGKElSDKKNEEKDLFGSDSESGNEEENLIADIFGESGDEEEEEFTGFN 497
Cdd:NF033609 679 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD-SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 757
|
250 260 270
....*....|....*....|....*....|....*...
gi 578804572 498 QEDLEEEKGETQVKEAEDSDSDDNIKRGKHMDFLSDFE 535
Cdd:NF033609 758 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 795
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| COG5139 |
COG5139 |
Uncharacterized conserved protein [Function unknown]; |
533-782 |
1.05e-28 |
|
Uncharacterized conserved protein [Function unknown];
Pssm-ID: 227468 Cd Length: 397 Bit Score: 119.42 E-value: 1.05e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 533 DFEMMLQRKKSMSGKRRRNRDGGTFISDADDVVSAMIVKMNEAAEEDRQLNNQKKPALKKLTLLPAVVMHLKKQDLKETF 612
Cdd:COG5139 126 ELGDTGDRQLKAPAASRARRKEDLLEQTVDEISLRLKKRMQDAAKKDNANNLEGRPATGKIKNLPEVSDVLMKKALQDTI 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 613 IDSGVMSAIKEWLSPLPDRSLPALKIREELLKILQELPsVSQETLKHSGIGRAVMYLYKHPKESRSNKDMAGKLINEWSR 692
Cdd:COG5139 206 LDNNILDSVRGWLEPLPDKSLPNIKIQKSLLDVLKTLP-IHTEHLVESGVGRIVYFYTISKKEEKEVRRSAKALVQEWTR 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 693 PIFGLTSNYKGmTREEREQRDLEQMPQRRRMNSTGGQTpRRDLEKVLTGEEKALRPGDPGFCARARV---PMPSNKDYVV 769
Cdd:COG5139 285 PIIKPSGNYRD-KRIMQLEFDSEKLRKKSVMDSAKNRK-KKSSGEDPTSRGSSVQTLYEQAAARRNRaaaPAQTTTDYKY 362
|
250
....*....|...
gi 578804572 770 RPkwnVEMESSRP 782
Cdd:COG5139 363 AP---VSNLSAVP 372
|
|
| Med26 |
pfam08711 |
TFIIS helical bundle-like domain; Mediator is a large complex of up to 33 proteins that is ... |
641-694 |
4.37e-12 |
|
TFIIS helical bundle-like domain; Mediator is a large complex of up to 33 proteins that is conserved from plants to fungi to humans - the number and representation of individual subunits varying with species {1-2]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Mediator exists in two major forms in human cells: a smaller form that interacts strongly with pol II and activates transcription, and a large form that does not interact strongly with pol II and does not directly activate transcription. Notably, the 'small' and 'large' Mediator complexes differ in their subunit composition: the Med26 subunit preferentially associates with the small, active complex, whereas cdk8, cyclin C, Med12 and Med13 associate with the large Mediator complex. This family includesthe C terminal region of a number of eukaryotic hypothetical proteins which are homologous to the Saccharomyces cerevisiae protein IWS1. IWS1 is known to be an Pol II transcription elongation factor and interacts with Spt6 and Spt5.
Pssm-ID: 462573 [Multi-domain] Cd Length: 52 Bit Score: 61.38 E-value: 4.37e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 578804572 641 ELLKILQELPsVSQETLKHSGIGRAVMYLYKHPkESRSNKDMAGKLINEWSRPI 694
Cdd:pfam08711 1 KLLKKLEKLP-VTLELLKSTGIGKVVNKLRKHK-ENPEIKKLAKELVKKWKRLV 52
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
11-371 |
2.06e-10 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 64.55 E-value: 2.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 11 QDPPEEDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSverhseNETSDREdglpkghhvTDSENDEPlnlNASDSESE 90
Cdd:NF033609 546 EQPDEPGEIEPIPEDSDSDPGSDSGSDSSNSDSGSDSGS------DSTSDSG---------SDSASDSD---SASDSDSA 607
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 91 ElhrqkDSDSESEERAeppASDSENEDVNQHGSDSESEETrklpgSDSENEELLNGHASDSENEDVGKHPASDSEIEELQ 170
Cdd:NF033609 608 S-----DSDSASDSDS---ASDSDSASDSDSASDSDSASD-----SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 674
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 171 KSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESEelpkpqvSDSESEEPPRHQASDSENEELPKP 250
Cdd:NF033609 675 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD-------SDSDSDSDSDSDSDSDSDSDSDSD 747
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 251 RISDSESEDPPRHQASDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVSDSESEGPQKgpaSDSETEDASRHKQ 330
Cdd:NF033609 748 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDS 824
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 578804572 331 KPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKKFHSSDSE 371
Cdd:NF033609 825 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDSE 865
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
9-300 |
5.53e-07 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 53.37 E-value: 5.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 9 SDQDPPEEDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSVERHSENETSDRE-DGLPKGHHVTDSENDEPLNLNASDS 87
Cdd:NF033609 608 SDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDsDSDSDSDSDSDSDSDSDSDSDSDSD 687
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 88 ESEELHRQKDSDSESEERAEpPASDSENEDVNQHGSDSESE-ETRKLPGSDSENEELLNGHASDSENEDVGKHPASDSEI 166
Cdd:NF033609 688 SDSDSDSDSDSDSDSDSDSD-SDSDSDSDSDSDSDSDSDSDsDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 766
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 167 EELQKSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESEELPKPQvSDSESEEPPRHQASDSENEE 246
Cdd:NF033609 767 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD-SDSDSDSDSDSDSDSDSDSD 845
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 578804572 247 LPKPRISDSESEDPPRHQASDSENEELPKPRISDSESEDPPRNQASDSEnEELP 300
Cdd:NF033609 846 SDSDSDSDSDSESDSNSDSESGSNNNVVPPNSPKNGTNASNKNEAKDSK-EPLP 898
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
206-533 |
1.08e-06 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 52.60 E-value: 1.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 206 EEPPKPRMSDSESEELPKPQVSDSEseePPRHQASDSENEELPKPRISDSESeDPPRHQASDSENEElPKPRISDSESeD 285
Cdd:NF033609 540 DKPVVPEQPDEPGEIEPIPEDSDSD---PGSDSGSDSSNSDSGSDSGSDSTS-DSGSDSASDSDSAS-DSDSASDSDS-A 613
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 286 PPRNQASDSENEElPKPRVSDSESEGPQKGpASDSETEDASRHKQKPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKKF 365
Cdd:NF033609 614 SDSDSASDSDSAS-DSDSASDSDSASDSDS-DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 691
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 366 HSSDSEEEEHKKQKMDSDEDEKEGEEEKVAKRKAAVLSDSEDEEKASAKKSRVVSDADDSDSDAVSDKSGKREKTIASDS 445
Cdd:NF033609 692 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 771
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 446 EEEAGKELSDKKNEEKDLFGSDSESGNEEENLIADIFGESGDEEEEEFTGFNQEDLEEEKGETQVKEAEDSDSDDNIKRG 525
Cdd:NF033609 772 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 851
|
....*...
gi 578804572 526 KHMDFLSD 533
Cdd:NF033609 852 SDSDSESD 859
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
128-476 |
1.69e-06 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 51.83 E-value: 1.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 128 EETRKLPGSDSeneellnghASDSENEDVGKHPASDSEIEELQKSPASDSETEDALKPQISDSESEEpprHQASDSENEE 207
Cdd:NF033609 559 EDSDSDPGSDS---------GSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDS---DSASDSDSAS 626
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 208 PpkprmSDSESEelpkpqvSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQASDSENEELPKPRISDSESE-DP 286
Cdd:NF033609 627 D-----SDSASD-------SDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDsDS 694
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 287 PRNQASDSENEelpkprvSDSESEgpqkgpaSDSETEDASRHKQKPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKKFH 366
Cdd:NF033609 695 DSDSDSDSDSD-------SDSDSD-------SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 760
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 367 SSDSEEEEHKKQKMDSDEDEKEGeeekvakrkaavlSDSEDEEKASAKKSRVVSDADDSDSDAVSDKSGKREKTIASDSE 446
Cdd:NF033609 761 DSDSDSDSDSDSDSDSDSDSDSD-------------SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 827
|
330 340 350
....*....|....*....|....*....|.
gi 578804572 447 EEAGKEL-SDKKNEEKDLFGSDSESGNEEEN 476
Cdd:NF033609 828 SDSDSDSdSDSDSDSDSDSDSDSDSDSDSES 858
|
|
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
84-357 |
3.60e-06 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 50.56 E-value: 3.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 84 ASDSESEELHRQKDSDSESEEraeppasDSENEDVNQHGSDSESEETRKLPGSDSENEELLNGHASDSEN--EDVGKHPA 161
Cdd:PRK08581 28 DDPQKDSTAKTTSHDSKKSND-------DETSKDTSSKDTDKADNNNTSNQDNNDKKFSTIDSSTSDSNNiiDFIYKNLP 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 162 SDSEIEELQKSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESEelpkpQVSDSESEEPPRHQASD 241
Cdd:PRK08581 101 QTNINQLLTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNSEKSTNDSNKNSDSSIK-----NDTDTQSSKQDKADNQK 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 242 SENEELPKPRISDSESEDPPRHQASDSEneelpkpriSDSESEDPPRNQASDSENEEL---PKPRVSDSESEGPQKGPAS 318
Cdd:PRK08581 176 APSSNNTKPSTSNKQPNSPKPTQPNQSN---------SQPASDDTANQKSSSKDNQSMsdsALDSILDQYSEDAKKTQKD 246
|
250 260 270
....*....|....*....|....*....|....*....
gi 578804572 319 DSETEDASRHKQKPESDDDSDRENKGEDTEMQNDSFHSD 357
Cdd:PRK08581 247 YASQSKKDKTETSNTKNPQLPTQDELKHKSKPAQSFEND 285
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
9-321 |
3.99e-06 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 50.68 E-value: 3.99e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 9 SDQDPPEEDDGGAtpvQDERDSGSDGEDDVNEQHSGSDTGSVERHSENETSDREDGLPKGHHVTDSENDEPLNLNASDSE 88
Cdd:NF033609 602 SDSDSASDSDSAS---DSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 678
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 89 SEELHRQKDSDSESEERAEPPA-SDSENEDVNQHGSDSESEETRKlpgSDSENEELLNGHASDSENEDVGKHPASDSEIE 167
Cdd:NF033609 679 DSDSDSDSDSDSDSDSDSDSDSdSDSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 755
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 168 ELQKSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESEelpkpqvSDSESEepprhQASDSENEEL 247
Cdd:NF033609 756 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD-------SDSDSD-----SDSDSDSDSD 823
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 578804572 248 PKpriSDSESEDPPRHQASDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVSDSESEGPQKGPASDSE 321
Cdd:NF033609 824 SD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDSESGSNNNVVPPNSPKNGTNASNKNEAKDSK 894
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
16-334 |
5.68e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 50.17 E-value: 5.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 16 EDDGGATPVqderdSGSDGEDDVNEQHSGSDTGSVERHSENETSDREDGLPKGHHVTDSENDEPLNLNA--SDSESEELH 93
Cdd:PHA03307 28 PGDAADDLL-----SGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSlsTLAPASPAR 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 94 RQKDSDSESEERAEPPASDSENEDVNQHGSDSESEETRKLPGSDSENEELLNGHASDSENEDVGKHPASDSEI----EEL 169
Cdd:PHA03307 103 EGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPlsspEET 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 170 QKSPASDSETEDALKPQISDSESEEPPRHQASDSeneePPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEElPK 249
Cdd:PHA03307 183 ARAPSSPPAEPPPSTPPAAASPRPPRRSSPISAS----ASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENEC-PL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 250 PRIS--------------DSESEDPPRHQASDSENEELPKP--------------RISDSESEDPPRNQASDSENEELPK 301
Cdd:PHA03307 258 PRPApitlptriweasgwNGPSSRPGPASSSSSPRERSPSPspsspgsgpapsspRASSSSSSSRESSSSSTSSSSESSR 337
|
330 340 350
....*....|....*....|....*....|....
gi 578804572 302 PR-VSDSESEGPQKGPASDSETEDASRHKQKPES 334
Cdd:PHA03307 338 GAaVSPGPSPSRSPSPSRPPPPADPSSPRKRPRP 371
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
88-461 |
1.66e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.98 E-value: 1.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 88 ESEELHRQKDSDSESEERAEPPASDSENEDvnqhGSDSESEETRKLPGSDSENEELLNGHASDSENEDVGKHPASDSEIE 167
Cdd:PTZ00121 1392 KADEAKKKAEEDKKKADELKKAAAAKKKAD----EAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAE 1467
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 168 ELQKSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSEN--- 244
Cdd:PTZ00121 1468 EAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEkkk 1547
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 245 -EELPKPR-ISDSESEDPPRHQASDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVSDSESEGPQKGPASDSET 322
Cdd:PTZ00121 1548 aDELKKAEeLKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKK 1627
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 323 EDASRHKQKPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKKFHSSDSEEEEHKKQKMDSDEDEKEGEEEKVAKRKAAVL 402
Cdd:PTZ00121 1628 AEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEEL 1707
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 578804572 403 SDSEDEEKASAKKSRVVSDADDSDSDAVSDKS--GKREKTIASDSEEEAGKELSDKKNEEK 461
Cdd:PTZ00121 1708 KKKEAEEKKKAEELKKAEEENKIKAEEAKKEAeeDKKKAEEAKKDEEEKKKIAHLKKEEEK 1768
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
55-333 |
1.98e-05 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 48.53 E-value: 1.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 55 ENETSDREDGLPKGHHVTDSENDEPlnlnaSDSESEELHRQKDSDSESEERAEPPASDSENEDVNQHGSDSESEETRKLP 134
Cdd:PTZ00449 500 EEEDSDKHDEPPEGPEASGLPPKAP-----GDKEGEEGEHEDSKESDEPKEGGKPGETKEGEVGKKPGPAKEHKPSKIPT 574
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 135 GSDSENEELLNGHASDSENEDVGKHPASDS--------EIEELQKSPASDSETEDALKPQisdseSEEPPRHQASDSENE 206
Cdd:PTZ00449 575 LSKKPEFPKDPKHPKDPEEPKKPKRPRSAQrptrpkspKLPELLDIPKSPKRPESPKSPK-----RPPPPQRPSSPERPE 649
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 207 EPPKPRMSDS-ESEELP-----KPQVSDSESEEPPRHQASDSeNEELPKPRISDSESEDPPRHQASDSENEELPKPRISD 280
Cdd:PTZ00449 650 GPKIIKSPKPpKSPKPPfdpkfKEKFYDDYLDAAAKSKETKT-TVVLDESFESILKETLPETPGTPFTTPRPLPPKLPRD 728
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 578804572 281 SES-----EDPPRNQASDSENEELP---KPRVSDSESEGPQKG-PASDSETEDASRHKQKPE 333
Cdd:PTZ00449 729 EEFpfepiGDPDAEQPDDIEFFTPPeeeRTFFHETPADTPLPDiLAEEFKEEDIHAETGEPD 790
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
96-338 |
2.12e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 48.24 E-value: 2.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 96 KDSDSESEERAEPPASDSENEDVNQHGSDSESEETRKLPGSDSENEellNGHASDSENEDvGKHPASDSEieelqkSPAS 175
Cdd:PHA03307 59 AAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREG---SPTPPGPSSPD-PPPPTPPPA------SPPP 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 176 DSETeDALKPQISDSESEEPPRHQASDSENEEPPKPR-------------MSDSESEELPKPQVSDSESEEPPRHQASDS 242
Cdd:PHA03307 129 SPAP-DLSEMLRPVGSPGPPPAASPPAAGASPAAVASdaassrqaalplsSPEETARAPSSPPAEPPPSTPPAAASPRPP 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 243 EneelPKPRISDSESED---PPRHQASDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVSDS----ESEGPQKG 315
Cdd:PHA03307 208 R----RSSPISASASSPapaPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEasgwNGPSSRPG 283
|
250 260
....*....|....*....|...
gi 578804572 316 PASDSETEDASRHKQKPESDDDS 338
Cdd:PHA03307 284 PASSSSSPRERSPSPSPSSPGSG 306
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
82-341 |
2.34e-05 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 48.12 E-value: 2.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 82 LNASDSESEELHRQKDSDSESEERAEPPASDSENEDVNQHGSDSESEETRKLPGSDSENEELLNGHASDSENEDVGKHPA 161
Cdd:PTZ00108 1134 LDKFEEALEEQEEVEEKEIAKEQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKP 1213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 162 SDSEIEELQKSPASDSETEDALKpqiSDSESEEPPRHQASDSENEEPPKPRMSDSESEELPK--PQVSDSESEEPPrhqa 239
Cdd:PTZ00108 1214 DNKKSNSSGSDQEDDEEQKTKPK---KSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKnaPKRVSAVQYSPP---- 1286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 240 sdSENEELPKPRISDSESEDPPRHQASDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVSDSESEGPQKGPASD 319
Cdd:PTZ00108 1287 --PPSKRPDGESNGGSKPSSPTKKKVKKRLEGSLAALKKKKKSEKKTARKKKSKTRVKQASASQSSRLLRRPRKKKSDSS 1364
|
250 260
....*....|....*....|..
gi 578804572 320 SETEDASRHKQKPESDDDSDRE 341
Cdd:PTZ00108 1365 SEDDDDSEVDDSEDEDDEDDED 1386
|
|
| Ebola_NP |
pfam05505 |
Ebola nucleoprotein; This family consists of Ebola and Marburg virus nucleoproteins. These ... |
47-298 |
2.93e-05 |
|
Ebola nucleoprotein; This family consists of Ebola and Marburg virus nucleoproteins. These proteins are responsible for encapsidation of genomic RNA. It has been found that nucleoprotein DNA vaccines can offer protection from the virus.
Pssm-ID: 398905 Cd Length: 717 Bit Score: 47.81 E-value: 2.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 47 TGSVERHSENETSdredglpkGHHVTDSENDEPLNLNASDSESEelhrQKDSDSESEERAEPPASDSENEdvNQHGSDSE 126
Cdd:pfam05505 388 TEAITAASLPKTS--------GHYDDDDDIPFPGPINDDDNPGH----QDDDPTDSQDTTIPDVVVDPDD--GSYGEYQS 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 127 SEETrklpGSDSENEELLNGhaSDSENEDVGKHPASDSEIEELQKSPASDSETEDALKPQISDSESEEPPR--HQASDSE 204
Cdd:pfam05505 454 YSEN----GMNAPDDLVLLN--EDEDDLEDTKPVPNRSTKGGQQKNSQKGQHIEGRQTQSRPIQNVPGPHRtiHHASAPL 527
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 205 NEEPPKPRMSDSESEELPKPQvsdseSEEPPRHQASDSENEELPkPRISDSESED-------------PPRHQASDSENE 271
Cdd:pfam05505 528 TDNDRRNEPSGSTSPRMLTPI-----NEEADPLDDADDETSSLP-PLESDDEEQDrdgtsnrtptvapPAPVYRDHSEKK 601
|
250 260
....*....|....*....|....*..
gi 578804572 272 ELPKPRISDSESEDPPRNQASDSENEE 298
Cdd:pfam05505 602 ELPQDEQQDQDHTQEARNQDSDNTQSE 628
|
|
| PHA03321 |
PHA03321 |
tegument protein VP11/12; Provisional |
192-348 |
4.89e-05 |
|
tegument protein VP11/12; Provisional
Pssm-ID: 223041 [Multi-domain] Cd Length: 694 Bit Score: 46.87 E-value: 4.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 192 SEEPPRHQASDSENEEPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRhqaSDSENE 271
Cdd:PHA03321 427 SRQPPGAPAPRRDNDPPPPPRARPGSTPACARRARAQRARDAGPEYVDPLGALRRLPAGAAPPPEPAAAPS---PATYYT 503
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 272 EL--PKPRIsdsesedPPRNQASDSENEELPKPRVSDSESEGP-------QKGPASDSETEDASRHKQK-PESDDDSDRE 341
Cdd:PHA03321 504 RMggGPPRL-------PPRNRATETLRPDWGPPAAAPPEQMEDpylepddDRFDRRDGAAAAATSHPREaPAPDDDPIYE 576
|
....*..
gi 578804572 342 NKGEDTE 348
Cdd:PHA03321 577 GVSDSEE 583
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
16-208 |
1.30e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 45.76 E-value: 1.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 16 EDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSVERHSENETSDREDGLPKGHHVTDSENDEPLNLNASDSESEELHRQ 95
Cdd:TIGR00927 707 KGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAG 786
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 96 KDSDSESEERAEPP--ASDSENEDVNQHGSDSESEETRKLPGSDSENEELLNGHASDSENEDvgkhpasDSEIEELQKSP 173
Cdd:TIGR00927 787 EDGEMKGDEGAEGKveHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQD-------EKGVDGGGGSD 859
|
170 180 190
....*....|....*....|....*....|....*
gi 578804572 174 ASDSETEDALKPQISDSESEEPPRHQaSDSENEEP 208
Cdd:TIGR00927 860 GGDSEEEEEEEEEEEEEEEEEEEEEE-EEEENEEP 893
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
120-379 |
3.06e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 44.60 E-value: 3.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 120 QHGSDSESEETRKLPGSDSENEELLNGHAS-DSENEDVGKHPASDSEIEELQKSPASDSETEDALKPQISDSESEEPPRH 198
Cdd:TIGR00927 639 EHTGERTGEEGERPTEAEGENGEESGGEAEqEGETETKGENESEGEIPAERKGEQEGEGEIEAKEADHKGETEAEEVEHE 718
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 199 QASDSENEEPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQAsdSENEELpkpri 278
Cdd:TIGR00927 719 GETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQA--GEDGEM----- 791
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 279 sdsESEDPPRNQASDSENEELPKPRVSDSESEGPQKGPASDSETEDAsrhKQKPESDDDSDRENKGEDTEMQNDSFHSDS 358
Cdd:TIGR00927 792 ---KGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQ---ELNAENQGEAKQDEKGVDGGGGSDGGDSEE 865
|
250 260
....*....|....*....|.
gi 578804572 359 HMDRKKFHSSDSEEEEHKKQK 379
Cdd:TIGR00927 866 EEEEEEEEEEEEEEEEEEEEE 886
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
139-346 |
3.09e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 44.31 E-value: 3.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 139 ENEELLNGHASDSENEDVGKHPASDSEIEELQKSPASDSEtedALKPqiSDSESEEPPRHQAsdsENEEPPKPRMSDSES 218
Cdd:PRK08691 373 ENTELQSPSAQTAEKETAAKKPQPRPEAETAQTPVQTASA---AAMP--SEGKTAGPVSNQE---NNDVPPWEDAPDEAQ 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 219 EELPKPQVSD------SESEEPPRHQ-----ASDSENE----ELPKPR-ISDSESEDPPRHQASDSENEELPKPRISDSE 282
Cdd:PRK08691 445 TAAGTAQTSAksiqtaSEAETPPENQvsknkAADNETDaplsEVPSENpIQATPNDEAVETETFAHEAPAEPFYGYGFPD 524
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 578804572 283 SEDPPRnqasdsENEELPKPrvsDSESEGPQKGPASDSETEDASRHKQKPESDDDSDRENKGED 346
Cdd:PRK08691 525 NDCPPE------DGAEIPPP---DWEHAAPADTAGGGADEEAEAGGIGGNNTPSAPPPEFSTEN 579
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
16-272 |
4.49e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 43.83 E-value: 4.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 16 EDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSVERHSENETSDREDGLPKGHHVTDSENDEPLNLNASDSESEELHRQ 95
Cdd:TIGR00927 639 EHTGERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEADHKGETEAEEVEHE 718
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 96 KDSDSESEERAEPPASDSENEDVNQHG-SDSESEETRKLPGSDSENEELLNGHASDSENEDVGK-HPASDSEIEELQKSP 173
Cdd:TIGR00927 719 GETEAEGTEDEGEIETGEEGEEVEDEGeGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEiQAGEDGEMKGDEGAE 798
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 174 ASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESEELPKPQVSDSESEEpprhQASDSENEELPKPRIS 253
Cdd:TIGR00927 799 GKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGS----DGGDSEEEEEEEEEEE 874
|
250
....*....|....*....
gi 578804572 254 DSESEDPPRHQaSDSENEE 272
Cdd:TIGR00927 875 EEEEEEEEEEE-EEEENEE 892
|
|
| ECM1 |
pfam05782 |
Extracellular matrix protein 1 (ECM1); This family consists of several eukaryotic ... |
208-317 |
5.15e-04 |
|
Extracellular matrix protein 1 (ECM1); This family consists of several eukaryotic extracellular matrix protein 1 (ECM1) sequences. ECM1 has been shown to regulate endochondral bone formation, stimulate the proliferation of endothelial cells and induce angiogenesis. Mutations in the ECM1 gene can cause lipoid proteinosis, a disorder which causes generalized thickening of skin, mucosae and certain viscera. Classical features include beaded eyelid papules and laryngeal infiltration leading to hoarseness.
Pssm-ID: 461739 Cd Length: 518 Bit Score: 43.68 E-value: 5.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 208 PPKPR---MSDSESEELPKPQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQASDSENEELPKPRISDSESE 284
Cdd:pfam05782 9 PPQTRglpVDHPDTSQHDPPFEGQSEVQPPPSQEAIPVQEEELPPPQLPVEKKVDPPLPQEAIPLQEELPPPQLPIEQKE 88
|
90 100 110
....*....|....*....|....*....|....*...
gi 578804572 285 -DPPRNQASD----SENEELPKPRVSDSESEGPQKGPA 317
Cdd:pfam05782 89 iDPPFPQQEEitpsKQREEKPAPLVGQGHPEPESWNPA 126
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
245-520 |
5.19e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 43.83 E-value: 5.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 245 EELPKPRISDSESEDPPRHQASDSENE-ELPKPRISDSESEdPPRNQASDSENE---ELPKPRVSDSESEGPQKGPASDS 320
Cdd:TIGR00927 628 GDLSKGDVAEAEHTGERTGEEGERPTEaEGENGEESGGEAE-QEGETETKGENEsegEIPAERKGEQEGEGEIEAKEADH 706
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 321 ETEDASRHKQ-----KPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKKFHSSDSEEEEHKKQKMDSDEDekegeeekva 395
Cdd:TIGR00927 707 KGETEAEEVEhegetEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKE---------- 776
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 396 krkaavlSDSEDEEKASAKKSRVVSDADDSDSDAVSDKSGKREKTIASDSEEEAGKELSDKKNEEKDLFGSDSESGNEEE 475
Cdd:TIGR00927 777 -------DEDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDE 849
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 578804572 476 NLIADifGESGDEEEEEFTGFNQEDLEEEKGETQVKEAEDSDSDD 520
Cdd:TIGR00927 850 KGVDG--GGGSDGGDSEEEEEEEEEEEEEEEEEEEEEEEEEENEE 892
|
|
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
13-231 |
6.04e-04 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 43.24 E-value: 6.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 13 PPEEDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSVERHSENETSDREDGLPKghhvtDSENDEPLNLNASDSESeel 92
Cdd:PRK08581 110 KNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNSEKSTNDSNKNSDSSIKNDTDTQ-----SSKQDKADNQKAPSSNN--- 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 93 hrQKDSDSESEERAEPPASDSENedvnqhGSDSESEETRKLPGSDSENEEllnghASDSENEDVGKHPASDSEIEE---L 169
Cdd:PRK08581 182 --TKPSTSNKQPNSPKPTQPNQS------NSQPASDDTANQKSSSKDNQS-----MSDSALDSILDQYSEDAKKTQkdyA 248
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 578804572 170 QKSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESEELpkPQVSDSES 231
Cdd:PRK08581 249 SQSKKDKTETSNTKNPQLPTQDELKHKSKPAQSFENDVNQSNTRSTSLFETG--PSLSNNDD 308
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
153-339 |
8.31e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 42.65 E-value: 8.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 153 NEDVGKHPASDSEIEELQKSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESEELPKPQVSDSESE 232
Cdd:PHA03169 49 PAPTTSGPQVRAVAEQGHRQTESDTETAEESRHGEKEERGQGGPSGSGSESVGSPTPSPSGSAEELASGLSPENTSGSSP 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 233 EpprhqaSDSENEELPKPRISDSESEDPPRHQASDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVSDSESEGP 312
Cdd:PHA03169 129 E------SPASHSPPPSPPSHPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSPEEPEPPTSEPEPDSPGPPQSETPTSSP 202
|
170 180
....*....|....*....|....*..
gi 578804572 313 QKGPASDSETEDASRHKQKPESDDDSD 339
Cdd:PHA03169 203 PPQSPPDEPGEPQSPTPQQAPSPNTQQ 229
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
103-268 |
8.79e-04 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 42.66 E-value: 8.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 103 EERAEPPASDSENEDVNQHGSDSESEETRKLPGSDSENEELLNGHASDSENEDVGKHPASDSEIEElqKSPASDSETE-D 181
Cdd:PRK13108 293 DEALEREPAELAAAAVASAASAVGPVGPGEPNQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGE--STPAVEETSEaD 370
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 182 ALKPQISDSESEEPPRHQASDS-ENEEPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEElpkPRISDSESEDP 260
Cdd:PRK13108 371 IEREQPGDLAGQAPAAHQVDAEaASAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAVAG---PGDDPAEPDGI 447
|
....*...
gi 578804572 261 PRHQASDS 268
Cdd:PRK13108 448 RRQDDFSS 455
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
258-535 |
1.26e-03 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 42.59 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 258 EDPPRHQASDSENEELPKPRISDSeseDPPRNQASDSENEELPKPRVSDSESEgpqKGPASDSETEDASRHKQKPESDDD 337
Cdd:NF033609 540 DKPVVPEQPDEPGEIEPIPEDSDS---DPGSDSGSDSSNSDSGSDSGSDSTSD---SGSDSASDSDSASDSDSASDSDSA 613
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 338 SDRENKGEDTEMQNDSFHSDSHMDRKKFHSSDSEEEEHKKQKMDSDEDEKegeeekvakrkaavlSDSEDEEKASAKKSR 417
Cdd:NF033609 614 SDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSD---------------SDSDSDSDSDSDSDS 678
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 418 VVSDADDSDSDAVSDKSGKREKTIASDSEEEAGKElSDKKNEEKDLFGSDSESGNEEENLIADIFGESGDEEEEEFTGFN 497
Cdd:NF033609 679 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD-SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 757
|
250 260 270
....*....|....*....|....*....|....*...
gi 578804572 498 QEDLEEEKGETQVKEAEDSDSDDNIKRGKHMDFLSDFE 535
Cdd:NF033609 758 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 795
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
3-325 |
1.50e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.47 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 3 TLLPRGSDQDPPEEDDGGATPVQDER--DSGSDGEDDVNEqHSGSDTGSVERHSENETSDREDGLPKGHHVTDSENDEPL 80
Cdd:PHA03307 94 TLAPASPAREGSPTPPGPSSPDPPPPtpPPASPPPSPAPD-LSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQA 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 81 NLNASDSESEElhRQKDSDSE----SEERAEPPASDSENEDVNQHGSDS------ESEETRKLPGSDSENEELLNGHASD 150
Cdd:PHA03307 173 ALPLSSPEETA--RAPSSPPAepppSTPPAAASPRPPRRSSPISASASSpapapgRSAADDAGASSSDSSSSESSGCGWG 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 151 SENEDVGKHPASDSEIEELQKSPASDSETEDAL--KPQISDSESEEPPRHQASDSEnEEPPKPRMSDSESEELPKPQVSD 228
Cdd:PHA03307 251 PENECPLPRPAPITLPTRIWEASGWNGPSSRPGpaSSSSSPRERSPSPSPSSPGSG-PAPSSPRASSSSSSSRESSSSST 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 229 SESEEPPRHQASDS--ENEELPKPRiSDSESEDPPRHQASDSENEELPKPRISDSESEdpPRNQASDSENEELPKPRVSD 306
Cdd:PHA03307 330 SSSSESSRGAAVSPgpSPSRSPSPS-RPPPPADPSSPRKRPRPSRAPSSPAASAGRPT--RRRARAAVAGRARRRDATGR 406
|
330
....*....|....*....
gi 578804572 307 SESEGPQKGPASDSETEDA 325
Cdd:PHA03307 407 FPAGRPRPSPLDAGAASGA 425
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
170-350 |
1.50e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.62 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 170 QKSPASDSETEDALKPQISDSESEEPPRHQASDSE---NEEPPKPRMSDSESEELPKPQVSDSESEEPPRHQA--SDSEN 244
Cdd:PHA03247 2864 RRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFalpPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPprPQPPL 2943
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 245 EELPKPRISDSESEDPPRHQASDSENEELPKPRISDSESEDP-PRNQASDSENEELPKPRVSDSES-----EGPQKGPAS 318
Cdd:PHA03247 2944 APTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSrEAPASSTPPLTGHSLSRVSSWASslalhEETDPPPVS 3023
|
170 180 190
....*....|....*....|....*....|..
gi 578804572 319 DSETEDASRHKQkpESDDDSDRENKGEDTEMQ 350
Cdd:PHA03247 3024 LKQTLWPPDDTE--DSDADSLFDSDSERSDLE 3053
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
6-246 |
1.73e-03 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 41.90 E-value: 1.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 6 PRGSDQDPPEEDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSVERHSENETSDrEDGLPKGHHVTDSENDEPLNLNAS 85
Cdd:TIGR00927 669 QEGETETKGENESEGEIPAERKGEQEGEGEIEAKEADHKGETEAEEVEHEGETEA-EGTEDEGEIETGEEGEEVEDEGEG 747
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 86 DSESEELHRQKDSDSESEERAEPPASDSENEDVN--QHGSDSESEETRKLPGSDSENEELLNGHASDSENEDVGKHPASD 163
Cdd:TIGR00927 748 EAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGeiQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTE 827
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 164 SEIEELQKSPASDSETEDALKPQISDSESEEpprhQASDSENEEPPKPRMSDSESEElpkpqvsdsESEEpprhqASDSE 243
Cdd:TIGR00927 828 VKDETGEQELNAENQGEAKQDEKGVDGGGGS----DGGDSEEEEEEEEEEEEEEEEE---------EEEE-----EEEEE 889
|
...
gi 578804572 244 NEE 246
Cdd:TIGR00927 890 NEE 892
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
78-293 |
2.04e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 41.96 E-value: 2.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 78 EPLNLNASDSESEELHRQKDSDSESEERAEPPASDSENEDVNQHGSDSESEETRKLPGSDSENEELLNGHASDSENEDVG 157
Cdd:PTZ00108 1179 KKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKTKPKKSSVKRLKSKKNNSSKSSEDND 1258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 158 KHPASDSEIEELQKSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRM----SDSESEELPKPQVSDSESEE 233
Cdd:PTZ00108 1259 EFSSDDLSKEGKPKNAPKRVSAVQYSPPPPSKRPDGESNGGSKPSSPTKKKVKKRLegslAALKKKKKSEKKTARKKKSK 1338
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 234 PPRHQASDSENEElPKPRISDSESEDpprhqASDSENEELPkpriSDSESEDPPRNQASD 293
Cdd:PTZ00108 1339 TRVKQASASQSSR-LLRRPRKKKSDS-----SSEDDDDSEV----DDSEDEDDEDDEDDD 1388
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
79-293 |
2.97e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 41.23 E-value: 2.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 79 PLNLNASDS----ESEELHRQKDSDSESEERAEPP----ASDSENEDVNQHGSDSESEETRKL-PGSDSENEELLNGHAS 149
Cdd:PRK08691 360 PLAAASCDAnaviENTELQSPSAQTAEKETAAKKPqprpEAETAQTPVQTASAAAMPSEGKTAgPVSNQENNDVPPWEDA 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 150 DSENEDV-GKHPASDSEIE---ELQKSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESEELPKPQ 225
Cdd:PRK08691 440 PDEAQTAaGTAQTSAKSIQtasEAETPPENQVSKNKAADNETDAPLSEVPSENPIQATPNDEAVETETFAHEAPAEPFYG 519
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 578804572 226 VSDSESEEPPRhqasdsENEELPKPrisDSESEDPPRHQASDSENEELPKpRISDSESEDPPRNQASD 293
Cdd:PRK08691 520 YGFPDNDCPPE------DGAEIPPP---DWEHAAPADTAGGGADEEAEAG-GIGGNNTPSAPPPEFST 577
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
193-348 |
3.04e-03 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 41.12 E-value: 3.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 193 EEPPRHQASDSENEEPPKPrmsdsESEELPKPQVSDSESEEPPRHQASDSENE---ELPKPRISDSESEDPPRHQASDSE 269
Cdd:PRK13108 280 EAPGALRGSEYVVDEALER-----EPAELAAAAVASAASAVGPVGPGEPNQPDdvaEAVKAEVAEVTDEVAAESVVQVAD 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 270 NEELPKPRISDSESEDPPRNQASDSENEELPKPRVSDS-ESEGPQKGPASDSETEDASR----HKQKPESDDDSDRENKG 344
Cdd:PRK13108 355 RDGESTPAVEETSEADIEREQPGDLAGQAPAAHQVDAEaASAAPEEPAALASEAHDETEpevpEKAAPIPDPAKPDELAV 434
|
....
gi 578804572 345 EDTE 348
Cdd:PRK13108 435 AGPG 438
|
|
| DMP1 |
pfam07263 |
Dentin matrix protein 1 (DMP1); This family consists of several mammalian dentin matrix ... |
8-273 |
4.73e-03 |
|
Dentin matrix protein 1 (DMP1); This family consists of several mammalian dentin matrix protein 1 (DMP1) sequences. The dentin matrix acidic phosphoprotein 1 (DMP1) gene has been mapped to human chromosome 4q21. DMP1 is a bone and teeth specific protein initially identified from mineralized dentin. DMP1 is primarily localized in the nuclear compartment of undifferentiated osteoblasts. In the nucleus, DMP1 acts as a transcriptional component for activation of osteoblast-specific genes like osteocalcin. During the early phase of osteoblast maturation, Ca(2+) surges into the nucleus from the cytoplasm, triggering the phosphorylation of DMP1 by a nuclear isoform of casein kinase II. This phosphorylated DMP1 is then exported out into the extracellular matrix, where it regulates nucleation of hydroxyapatite. DMP1 is a unique molecule that initiates osteoblast differentiation by transcription in the nucleus and orchestrates mineralized matrix formation extracellularly, at later stages of osteoblast maturation. The DMP1 gene has been found to be ectopically expressed in lung cancer although the reason for this is unknown.
Pssm-ID: 462128 [Multi-domain] Cd Length: 519 Bit Score: 40.30 E-value: 4.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 8 GSDQDPPEEDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSVERHSENETSDREDGLPKGHHVTDSENDEPLNLNASDS 87
Cdd:pfam07263 248 ASTQDSGDSQSVEYPSRKFFRKSRISEEDDRGELDDSNTMEEVKSDSTESTSSKEAGLSQSREDSKSESQEDSEESQSQE 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 88 ESEELhrqKDSDSESEERAEPPASDSENEdvNQHGSDSESEETRKLPGSDSENEEllngHASD-SENEDVGKHPASDSEI 166
Cdd:pfam07263 328 DSQNS---QDPSSESSQEADLPSQESSSE--SQEEVVSESRGDNPDNTSSSEEDQ----EDSDsSEEDSLSTFSSSESES 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 167 EELQkspaSDSETEDALKpqiSDSESEEPPRHQASDSENEEPPKPRMSDSESEELPKPQVSDSESEEPPRHQASdSENEE 246
Cdd:pfam07263 399 REEQ----ADSESNESLR---SSEESPESSEDENSSSQEGLQSHSASTESQSEESQSEQDSQSEEDDESDSQDS-SRSKE 470
|
250 260
....*....|....*....|....*..
gi 578804572 247 LPKPRISDSESEDPPRHQASDSENEEL 273
Cdd:pfam07263 471 DSNSTESTSSSEEDGQSKNMEIESRKL 497
|
|
| PTZ00482 |
PTZ00482 |
membrane-attack complex/perforin (MACPF) Superfamily; Provisional |
10-181 |
5.05e-03 |
|
membrane-attack complex/perforin (MACPF) Superfamily; Provisional
Pssm-ID: 240433 [Multi-domain] Cd Length: 844 Bit Score: 40.62 E-value: 5.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 10 DQDPpeeDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSVERHSENETSDREdglpkghhvtDSENDEPLNlNASDSES 89
Cdd:PTZ00482 87 DDDD---DDEFDFLYEDDEDDAGNATSGESSTDDDSLLELPDRDEDADTQANN----------DQTNDFDQD-DSSNSQT 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 90 EELHRQKDSDSESEERAEPPASDSENE-DVNQHGSDSESEETRKLPGSDSENEELLNghaSDSENEDVGkhpASDSEIEE 168
Cdd:PTZ00482 153 DQGLKQSVNLSSAEKLIEEKKGQTENTfKFYNFGNDGEEAAAKDGGKSKSSDPGPLN---DSDGQGDDG---DPESAEED 226
|
170
....*....|...
gi 578804572 169 LQKSPASDSETED 181
Cdd:PTZ00482 227 KAASNTRAAYTKA 239
|
|
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
159-416 |
6.69e-03 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 40.16 E-value: 6.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 159 HPASDSEIEELQKSPASDSETEDalkpqisDSESEEPPRHQASDSENEEPPKPRMSDSESEELPKPQVSDSESEEPPRHQ 238
Cdd:PRK08581 26 YADDPQKDSTAKTTSHDSKKSND-------DETSKDTSSKDTDKADNNNTSNQDNNDKKFSTIDSSTSDSNNIIDFIYKN 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 239 ASDSENEELPKPRISDSESEDPPRHQASDSENEELPKPRISDSESE-DPPRNQASDSENEELPKPRVSDSESEGPQKGPA 317
Cdd:PRK08581 99 LPQTNINQLLTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNSEKsTNDSNKNSDSSIKNDTDTQSSKQDKADNQKAPS 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 318 SDSETEDASRHKQKPESDDDSdreNKGEDTEMQNDSFHSDSHMDRKKFHSS-------DSEEEEHKKQKMDSDEDEKEGE 390
Cdd:PRK08581 179 SNNTKPSTSNKQPNSPKPTQP---NQSNSQPASDDTANQKSSSKDNQSMSDsaldsilDQYSEDAKKTQKDYASQSKKDK 255
|
250 260
....*....|....*....|....*.
gi 578804572 391 EEKVAKRKAAVLSDSEDEEKASAKKS 416
Cdd:PRK08581 256 TETSNTKNPQLPTQDELKHKSKPAQS 281
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
168-382 |
7.04e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 40.03 E-value: 7.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 168 ELQKSPASDSETED--ALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESEElpkpqVSDSESEEPPRHQASDSENE 245
Cdd:PTZ00108 1168 KLRKPKLKKKEKKKkkSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSG-----SDQEDDEEQKTKPKKSSVKR 1242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578804572 246 ELPKPRISDSESEDPPRHQASDSENEELPK---PRISDSESEDPPRNQASDSENEelPKPRVSDSESEGPQKGPASDSET 322
Cdd:PTZ00108 1243 LKSKKNNSSKSSEDNDEFSSDDLSKEGKPKnapKRVSAVQYSPPPPSKRPDGESN--GGSKPSSPTKKKVKKRLEGSLAA 1320
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 578804572 323 EDASRHKQKPESDDDS--DRENKGEDTEMQNDSFhsdshmdRKKFHSSDSEEEEHKKQKMDS 382
Cdd:PTZ00108 1321 LKKKKKSEKKTARKKKskTRVKQASASQSSRLLR-------RPRKKKSDSSSEDDDDSEVDD 1375
|
|
| |
