|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
77-302 |
5.33e-27 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 113.10 E-value: 5.33e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 77 QHLSLQNNQLQELPyNELSRLSGLRTLNLHNNLISSegLPDEaFESLTQLQHLCVAHNKLSNAglpPDAFRGSEAIATLS 156
Cdd:COG4886 116 ESLDLSGNQLTDLP-EELANLTNLKELDLSNNQLTD--LPEP-LGNLTNLKSLDLSNNQLTDL---PEELGNLTNLKELD 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 157 LSNNQLSYLPPSL--PPSLERLHLQNNLISKVPRgALSRQTQLRELYLQHNQLTdsglDATTFSKLHSLEYLDLSHNQLT 234
Cdd:COG4886 189 LSNNQITDLPEPLgnLTNLEELDLSGNQLTDLPE-PLANLTNLETLDLSNNQLT----DLPELGNLTNLEELDLSNNQLT 263
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 235 TVP--AGLPRtLAILHLGRNRIRQVEAARLHGARGLRYLLLQHNQLGSSGLPAGALRPLRGLHTLHLYGN 302
Cdd:COG4886 264 DLPplANLTN-LKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKG 332
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
96-491 |
4.42e-22 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 100.69 E-value: 4.42e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 96 RLSGLRTLNLHNNLISSeGLPDEAFESLTQLQHLCVAHNKLSNAgLPpdafRGS-EAIATLSLSNNQLS----------- 163
Cdd:PLN00113 91 RLPYIQTINLSNNQLSG-PIPDDIFTTSSSLRYLNLSNNNFTGS-IP----RGSiPNLETLDLSNNMLSgeipndigsfs 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 164 --------------YLPPSLP--PSLERLHL-QNNLISKVPRgALSRQTQLRELYLQHNQLtdSGLDATTFSKLHSLEYL 226
Cdd:PLN00113 165 slkvldlggnvlvgKIPNSLTnlTSLEFLTLaSNQLVGQIPR-ELGQMKSLKWIYLGYNNL--SGEIPYEIGGLTSLNHL 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 227 DLSHNQLT-TVPAGLP--RTLAILHLGRNRIRQVEAARLHGARGLRYLLLQHNQLgsSGLPAGALRPLRGLHTLHLYGNG 303
Cdd:PLN00113 242 DLVYNNLTgPIPSSLGnlKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSL--SGEIPELVIQLQNLEILHLFSNN 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 304 LD-RVPPALPR--RLRALVLPHNHVAALGARDLVATPGLTELNLAYNRLaSARVHHRAFRRLRALrSLDLAGNQL-TRLP 379
Cdd:PLN00113 320 FTgKIPVALTSlpRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNL-TGEIPEGLCSSGNLF-KLILFSNSLeGEIP 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 380 MGLPT--GLRTLQLQRNQLRMLEPEPLAGLDQLRELSLAHNRLRvGDIGPGTWhELQALQMLDLSHNELSFVPPDL--PE 455
Cdd:PLN00113 398 KSLGAcrSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQ-GRINSRKW-DMPSLQMLSLARNKFFGGLPDSfgSK 475
|
410 420 430
....*....|....*....|....*....|....*.
gi 578833634 456 ALEELHLEGNRIGHVGPEAFLSTPRLRALFLRANRL 491
Cdd:PLN00113 476 RLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKL 511
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
155-483 |
1.78e-18 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 88.99 E-value: 1.78e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 155 LSLSNNQLSYLPPSLPPSLERLHLQNNLISKVPRgalSRQTQLRELYLQHNQLTdsgldattfsklhsleyldlshnqlt 234
Cdd:PRK15370 183 LRLKILGLTTIPACIPEQITTLILDNNELKSLPE---NLQGNIKTLYANSNQLT-------------------------- 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 235 TVPAGLPRTLAILHLGRNRIRQVeAARLHGArgLRYLLLQHNQLgsSGLPAGAlrPlRGLHTLHLYGNGLDRVPPALPRr 314
Cdd:PRK15370 234 SIPATLPDTIQEMELSINRITEL-PERLPSA--LQSLDLFHNKI--SCLPENL--P-EELRYLSVYDNSIRTLPAHLPS- 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 315 lralvlphnhvaalgardlvatpGLTELNlaynrlasarvhhrafrrlralrsldLAGNQLTRLPMGLPTGLRTLQLQRN 394
Cdd:PRK15370 305 -----------------------GITHLN--------------------------VQSNSLTALPETLPPGLKTLEAGEN 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 395 QLRMLePEPLAglDQLRELSLAHNRLRV-GDIGPGTwhelqaLQMLDLSHNELSFVPPDLPEALEELHLEGNRIGHVgPE 473
Cdd:PRK15370 336 ALTSL-PASLP--PELQVLDVSKNQITVlPETLPPT------ITTLDVSRNALTNLPENLPAALQIMQASRNNLVRL-PE 405
|
330
....*....|
gi 578833634 474 aflSTPRLRA 483
Cdd:PRK15370 406 ---SLPHFRG 412
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
313-515 |
7.94e-17 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 82.67 E-value: 7.94e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 313 RRLRALVLPHNHVAALGARDLVATPGLTELNLAYNRlasarvhhrAFRRLRALRSLDLAGNQLTRLPMGLP--TGLRTLQ 390
Cdd:COG4886 72 LLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE---------ELSNLTNLESLDLSGNQLTDLPEELAnlTNLKELD 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 391 LQRNQLRMLePEPLAGLDQLRELSLAHNRLRvgDIgPGTWHELQALQMLDLSHNELSFVPPDL--PEALEELHLEGNRIG 468
Cdd:COG4886 143 LSNNQLTDL-PEPLGNLTNLKSLDLSNNQLT--DL-PEELGNLTNLKELDLSNNQITDLPEPLgnLTNLEELDLSGNQLT 218
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 578833634 469 HVgPEAFLSTPRLRALFLRANRLhmTSIaaEAFLGLPNLRVVDTAGN 515
Cdd:COG4886 219 DL-PEPLANLTNLETLDLSNNQL--TDL--PELGNLTNLEELDLSNN 260
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
78-302 |
2.70e-15 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 74.82 E-value: 2.70e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 78 HLSLQNNQLQELPynELSRLSGLRTLNLHNNLISS-EGLpdeafESLTQLQHlcvahnklsnaglppdafrgseaiatLS 156
Cdd:cd21340 6 HLYLNDKNITKID--NLSLCKNLKVLYLYDNKITKiENL-----EFLTNLTH--------------------------LY 52
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 157 LSNNQLSYLPP--SLpPSLERLHLQNNLISKVprGALSRQTQLRELYLQHNQLtDSGL-----DATTFSKLHSLEYLDLS 229
Cdd:cd21340 53 LQNNQIEKIENleNL-VNLKKLYLGGNRISVV--EGLENLTNLEELHIENQRL-PPGEkltfdPRSLAALSNSLRVLNIS 128
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 578833634 230 HNQLTTVpaglpRTLAILHlgrnrirqveaarlhgarGLRYLLLQHNQLGSSGLPAGALRPLRGLHTLHLYGN 302
Cdd:cd21340 129 GNNIDSL-----EPLAPLR------------------NLEQLDASNNQISDLEELLDLLSSWPSLRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
171-233 |
9.06e-11 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 57.53 E-value: 9.06e-11
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 578833634 171 PSLERLHLQNNLISKVPRGALSRQTQLRELYLQHNQLTdsGLDATTFSKLHSLEYLDLSHNQL 233
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLT--TLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
384-446 |
4.49e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 52.53 E-value: 4.49e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 578833634 384 TGLRTLQLQRNQLRMLEPEPLAGLDQLRELSLAHNRLRVgdIGPGTWHELQALQMLDLSHNEL 446
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTT--LSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
368-516 |
2.17e-07 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 51.71 E-value: 2.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 368 LDLAGNQLTRLPmGLP--TGLRTLQLQRNQLRMLEPepLAGLDQLRELSLAHNRLRV--GdigpgtWHELQALQMLDLSH 443
Cdd:cd21340 29 LYLYDNKITKIE-NLEflTNLTHLYLQNNQIEKIEN--LENLVNLKKLYLGGNRISVveG------LENLTNLEELHIEN 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 444 NELsfvPPDLP------------EALEELHLEGNRIGHVGPEAFLStpRLRALFLRANRLHMTSIAAEAFLGLPNLRVVD 511
Cdd:cd21340 100 QRL---PPGEKltfdprslaalsNSLRVLNISGNNIDSLEPLAPLR--NLEQLDASNNQISDLEELLDLLSSWPSLRELD 174
|
....*
gi 578833634 512 TAGNP 516
Cdd:cd21340 175 LTGNP 179
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
457-516 |
9.00e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 45.98 E-value: 9.00e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 457 LEELHLEGNRIGHVGPEAFLSTPRLRALFLRANRLhmTSIAAEAFLGLPNLRVVDTAGNP 516
Cdd:pfam13855 3 LRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL--TTLSPGAFSGLPSLRYLDLSGNR 60
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
77-302 |
5.33e-27 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 113.10 E-value: 5.33e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 77 QHLSLQNNQLQELPyNELSRLSGLRTLNLHNNLISSegLPDEaFESLTQLQHLCVAHNKLSNAglpPDAFRGSEAIATLS 156
Cdd:COG4886 116 ESLDLSGNQLTDLP-EELANLTNLKELDLSNNQLTD--LPEP-LGNLTNLKSLDLSNNQLTDL---PEELGNLTNLKELD 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 157 LSNNQLSYLPPSL--PPSLERLHLQNNLISKVPRgALSRQTQLRELYLQHNQLTdsglDATTFSKLHSLEYLDLSHNQLT 234
Cdd:COG4886 189 LSNNQITDLPEPLgnLTNLEELDLSGNQLTDLPE-PLANLTNLETLDLSNNQLT----DLPELGNLTNLEELDLSNNQLT 263
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 235 TVP--AGLPRtLAILHLGRNRIRQVEAARLHGARGLRYLLLQHNQLGSSGLPAGALRPLRGLHTLHLYGN 302
Cdd:COG4886 264 DLPplANLTN-LKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKG 332
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
79-410 |
1.71e-25 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 108.87 E-value: 1.71e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 79 LSLQNNQLQELPYNELSRLSGLRTLNLHNNlisseglpdEAFESLTQLQHLCVAHNKLSNAglpPDAFRGSEAIATLSLS 158
Cdd:COG4886 77 LSLLLLSLLLLGLTDLGDLTNLTELDLSGN---------EELSNLTNLESLDLSGNQLTDL---PEELANLTNLKELDLS 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 159 NNQLSYLPPSLP--PSLERLHLQNNLISKVPRgALSRQTQLRELYLQHNQLTDSGldaTTFSKLHSLEYLDLSHNQLTTV 236
Cdd:COG4886 145 NNQLTDLPEPLGnlTNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQITDLP---EPLGNLTNLEELDLSGNQLTDL 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 237 PAGLPR--TLAILHLGRNRIRQVEAarLHGARGLRYLLLQHNQLgsSGLPagALRPLRGLHTLHLYGNGLDRVPPALPRR 314
Cdd:COG4886 221 PEPLANltNLETLDLSNNQLTDLPE--LGNLTNLEELDLSNNQL--TDLP--PLANLTNLKTLDLSNNQLTDLKLKELEL 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 315 LRALVLPHNHVAALGARDLVATPGLTELNLAYNRLASARVHHRAFRRLRALRSLDLAGNQLTRLPMGLPTGLRTLQLQRN 394
Cdd:COG4886 295 LLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGL 374
|
330
....*....|....*.
gi 578833634 395 QLRMLEPEPLAGLDQL 410
Cdd:COG4886 375 LEATLLTLALLLLTLL 390
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
57-235 |
3.99e-24 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 104.63 E-value: 3.99e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 57 TVDCDGLDLRVFPDNITRAA--QHLSLQNNQLQELPyNELSRLSGLRTLNLHNNLISSegLPDEaFESLTQLQHLCVAHN 134
Cdd:COG4886 117 SLDLSGNQLTDLPEELANLTnlKELDLSNNQLTDLP-EPLGNLTNLKSLDLSNNQLTD--LPEE-LGNLTNLKELDLSNN 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 135 KLSNAglpPDAFRGSEAIATLSLSNNQLSYLPPSLP--PSLERLHLQNNLISKVPrgALSRQTQLRELYLQHNQLTdsgl 212
Cdd:COG4886 193 QITDL---PEPLGNLTNLEELDLSGNQLTDLPEPLAnlTNLETLDLSNNQLTDLP--ELGNLTNLEELDLSNNQLT---- 263
|
170 180
....*....|....*....|...
gi 578833634 213 DATTFSKLHSLEYLDLSHNQLTT 235
Cdd:COG4886 264 DLPPLANLTNLKTLDLSNNQLTD 286
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
96-491 |
4.42e-22 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 100.69 E-value: 4.42e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 96 RLSGLRTLNLHNNLISSeGLPDEAFESLTQLQHLCVAHNKLSNAgLPpdafRGS-EAIATLSLSNNQLS----------- 163
Cdd:PLN00113 91 RLPYIQTINLSNNQLSG-PIPDDIFTTSSSLRYLNLSNNNFTGS-IP----RGSiPNLETLDLSNNMLSgeipndigsfs 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 164 --------------YLPPSLP--PSLERLHL-QNNLISKVPRgALSRQTQLRELYLQHNQLtdSGLDATTFSKLHSLEYL 226
Cdd:PLN00113 165 slkvldlggnvlvgKIPNSLTnlTSLEFLTLaSNQLVGQIPR-ELGQMKSLKWIYLGYNNL--SGEIPYEIGGLTSLNHL 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 227 DLSHNQLT-TVPAGLP--RTLAILHLGRNRIRQVEAARLHGARGLRYLLLQHNQLgsSGLPAGALRPLRGLHTLHLYGNG 303
Cdd:PLN00113 242 DLVYNNLTgPIPSSLGnlKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSL--SGEIPELVIQLQNLEILHLFSNN 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 304 LD-RVPPALPR--RLRALVLPHNHVAALGARDLVATPGLTELNLAYNRLaSARVHHRAFRRLRALrSLDLAGNQL-TRLP 379
Cdd:PLN00113 320 FTgKIPVALTSlpRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNL-TGEIPEGLCSSGNLF-KLILFSNSLeGEIP 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 380 MGLPT--GLRTLQLQRNQLRMLEPEPLAGLDQLRELSLAHNRLRvGDIGPGTWhELQALQMLDLSHNELSFVPPDL--PE 455
Cdd:PLN00113 398 KSLGAcrSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQ-GRINSRKW-DMPSLQMLSLARNKFFGGLPDSfgSK 475
|
410 420 430
....*....|....*....|....*....|....*.
gi 578833634 456 ALEELHLEGNRIGHVGPEAFLSTPRLRALFLRANRL 491
Cdd:PLN00113 476 RLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKL 511
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
83-465 |
5.61e-20 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 94.14 E-value: 5.61e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 83 NNQLQELPYnELSRLSGLRTLNL-HNNLISSegLPdEAFESLTQLQHLCVAHNKLSNAgLPPDAFrGSEAIATLSLSNNQ 161
Cdd:PLN00113 222 NNLSGEIPY-EIGGLTSLNHLDLvYNNLTGP--IP-SSLGNLKNLQYLFLYQNKLSGP-IPPSIF-SLQKLISLDLSDNS 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 162 LSYLPPSLP---PSLERLHL-QNNLISKVPRgALSRQTQLRELYLQHNQLtdSGLDATTFSKLHSLEYLDLSHNQLT-TV 236
Cdd:PLN00113 296 LSGEIPELViqlQNLEILHLfSNNFTGKIPV-ALTSLPRLQVLQLWSNKF--SGEIPKNLGKHNNLTVLDLSTNNLTgEI 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 237 PAGLPRT--LAILHLGRNRIRQVEAARLHGARGLRYLLLQHNQLgSSGLPAGALRpLRGLHTLHLYGNGL----DRVPPA 310
Cdd:PLN00113 373 PEGLCSSgnLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSF-SGELPSEFTK-LPLVYFLDISNNNLqgriNSRKWD 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 311 LPRrLRALVLPHNHVAAlGARDLVATPGLTELNLAYNRLASArvhhrafrrlralrsldlagnqLTRLPMGLPTgLRTLQ 390
Cdd:PLN00113 451 MPS-LQMLSLARNKFFG-GLPDSFGSKRLENLDLSRNQFSGA----------------------VPRKLGSLSE-LMQLK 505
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 578833634 391 LQRNQLRMLEPEPLAGLDQLRELSLAHNRLRvGDIgPGTWHELQALQMLDLSHNELSF-VPPDLP--EALEELHLEGN 465
Cdd:PLN00113 506 LSENKLSGEIPDELSSCKKLVSLDLSHNQLS-GQI-PASFSEMPVLSQLDLSQNQLSGeIPKNLGnvESLVQVNISHN 581
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
77-278 |
2.23e-19 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 90.38 E-value: 2.23e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 77 QHLSLQNNQLQELPyNELSRLSGLRTLNLHNNLISSegLPDEaFESLTQLQHLCVAHNKLSNAglpPDAFRGSEAIATLS 156
Cdd:COG4886 162 KSLDLSNNQLTDLP-EELGNLTNLKELDLSNNQITD--LPEP-LGNLTNLEELDLSGNQLTDL---PEPLANLTNLETLD 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 157 LSNNQLSYLPP-SLPPSLERLHLQNNLISKVPrgALSRQTQLRELYLQHNQLTDSGLDATTFSKLHSLEYLDLSHNQLTT 235
Cdd:COG4886 235 LSNNQLTDLPElGNLTNLEELDLSNNQLTDLP--PLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLE 312
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 578833634 236 VPAGLPRTLAILHLGRNRIRQVEAARLHGARGLRYLLLQHNQL 278
Cdd:COG4886 313 LLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLL 355
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
125-439 |
3.94e-19 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 91.30 E-value: 3.94e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 125 QLQHLCVAHNKLSNAglpPDAFRGSeaIATLSLSNNQLSYLPPSLPPSLERLHLQNNLISKVPRGALSrqtqlrelylqh 204
Cdd:PRK15370 200 QITTLILDNNELKSL---PENLQGN--IKTLYANSNQLTSIPATLPDTIQEMELSINRITELPERLPS------------ 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 205 nqltdsgldattfsklhSLEYLDLSHNQLTTVPAGLPRTLAILHLGRNRIRQVEAarlHGARGLRYLLLQHNQLgsSGLP 284
Cdd:PRK15370 263 -----------------ALQSLDLFHNKISCLPENLPEELRYLSVYDNSIRTLPA---HLPSGITHLNVQSNSL--TALP 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 285 AgALRPlrGLHTLHLYGNGLDRVPPALPRRLRALVLPHNHVAALGArdlVATPGLTElnlaynrlasarvhhrafrrlra 364
Cdd:PRK15370 321 E-TLPP--GLKTLEAGENALTSLPASLPPELQVLDVSKNQITVLPE---TLPPTITT----------------------- 371
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 578833634 365 lrsLDLAGNQLTRLPMGLPTGLRTLQLQRNQLRMLePEPLAGL----DQLRELSLAHNrlrvgdigPGTWHELQALQML 439
Cdd:PRK15370 372 ---LDVSRNALTNLPENLPAALQIMQASRNNLVRL-PESLPHFrgegPQPTRIIVEYN--------PFSERTIQNMQRL 438
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
155-483 |
1.78e-18 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 88.99 E-value: 1.78e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 155 LSLSNNQLSYLPPSLPPSLERLHLQNNLISKVPRgalSRQTQLRELYLQHNQLTdsgldattfsklhsleyldlshnqlt 234
Cdd:PRK15370 183 LRLKILGLTTIPACIPEQITTLILDNNELKSLPE---NLQGNIKTLYANSNQLT-------------------------- 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 235 TVPAGLPRTLAILHLGRNRIRQVeAARLHGArgLRYLLLQHNQLgsSGLPAGAlrPlRGLHTLHLYGNGLDRVPPALPRr 314
Cdd:PRK15370 234 SIPATLPDTIQEMELSINRITEL-PERLPSA--LQSLDLFHNKI--SCLPENL--P-EELRYLSVYDNSIRTLPAHLPS- 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 315 lralvlphnhvaalgardlvatpGLTELNlaynrlasarvhhrafrrlralrsldLAGNQLTRLPMGLPTGLRTLQLQRN 394
Cdd:PRK15370 305 -----------------------GITHLN--------------------------VQSNSLTALPETLPPGLKTLEAGEN 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 395 QLRMLePEPLAglDQLRELSLAHNRLRV-GDIGPGTwhelqaLQMLDLSHNELSFVPPDLPEALEELHLEGNRIGHVgPE 473
Cdd:PRK15370 336 ALTSL-PASLP--PELQVLDVSKNQITVlPETLPPT------ITTLDVSRNALTNLPENLPAALQIMQASRNNLVRL-PE 405
|
330
....*....|
gi 578833634 474 aflSTPRLRA 483
Cdd:PRK15370 406 ---SLPHFRG 412
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
100-447 |
3.21e-18 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 86.91 E-value: 3.21e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 100 LRTLNLHNNLISSEGLPDEAFESLTQLQHLCVAHNKLSNAGLPPDAFRGSEAIATLSLSNNQLSYLPPSLPPSLERLHLQ 179
Cdd:COG4886 1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 180 NNLISKVPRGALSRQTQLRELYLQHNQltdsgldatTFSKLHSLEYLDLSHNQLTTVPAGLPR--TLAILHLGRNRIRQV 257
Cdd:COG4886 81 LLSLLLLGLTDLGDLTNLTELDLSGNE---------ELSNLTNLESLDLSGNQLTDLPEELANltNLKELDLSNNQLTDL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 258 EAArLHGARGLRYLLLQHNQLgsSGLPAgALRPLRGLHTLHLYGNGLDRVPPAL--PRRLRALVLPHNHVAALGArDLVA 335
Cdd:COG4886 152 PEP-LGNLTNLKSLDLSNNQL--TDLPE-ELGNLTNLKELDLSNNQITDLPEPLgnLTNLEELDLSGNQLTDLPE-PLAN 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 336 TPGLTELNLAYNRLASArvhhRAFRRLRALRSLDLAGNQLTRLPMGLP-TGLRTLQLQRNQLRMLEPEPLAGLDQLRELS 414
Cdd:COG4886 227 LTNLETLDLSNNQLTDL----PELGNLTNLEELDLSNNQLTDLPPLANlTNLKTLDLSNNQLTDLKLKELELLLGLNSLL 302
|
330 340 350
....*....|....*....|....*....|...
gi 578833634 415 LAHNRLRVGDIGPGTWHELQALQMLDLSHNELS 447
Cdd:COG4886 303 LLLLLLNLLELLILLLLLTTLLLLLLLLKGLLV 335
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
39-276 |
4.17e-17 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 84.75 E-value: 4.17e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 39 LQPLPRACPlrcscPRVDTVDCDGLDLRVFPDNITRAAQHLSLQNNQLQELPYN--------ELSR----------LSGL 100
Cdd:PRK15370 190 LTTIPACIP-----EQITTLILDNNELKSLPENLQGNIKTLYANSNQLTSIPATlpdtiqemELSInritelperlPSAL 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 101 RTLNLHNNLISS--EGLPDEafesltqLQHLCVAHNKLSN--AGLPpdafrgsEAIATLSLSNNQLSYLPPSLPPSLERL 176
Cdd:PRK15370 265 QSLDLFHNKISClpENLPEE-------LRYLSVYDNSIRTlpAHLP-------SGITHLNVQSNSLTALPETLPPGLKTL 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 177 HLQNNLISKVPRgalSRQTQLRELYLQHNQLT--DSGLDATtfsklhsLEYLDLSHNQLTTVPAGLPRTLAILHLGRNRI 254
Cdd:PRK15370 331 EAGENALTSLPA---SLPPELQVLDVSKNQITvlPETLPPT-------ITTLDVSRNALTNLPENLPAALQIMQASRNNL 400
|
250 260
....*....|....*....|....*.
gi 578833634 255 RQVEAARLH----GARGLRyLLLQHN 276
Cdd:PRK15370 401 VRLPESLPHfrgeGPQPTR-IIVEYN 425
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
313-515 |
7.94e-17 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 82.67 E-value: 7.94e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 313 RRLRALVLPHNHVAALGARDLVATPGLTELNLAYNRlasarvhhrAFRRLRALRSLDLAGNQLTRLPMGLP--TGLRTLQ 390
Cdd:COG4886 72 LLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE---------ELSNLTNLESLDLSGNQLTDLPEELAnlTNLKELD 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 391 LQRNQLRMLePEPLAGLDQLRELSLAHNRLRvgDIgPGTWHELQALQMLDLSHNELSFVPPDL--PEALEELHLEGNRIG 468
Cdd:COG4886 143 LSNNQLTDL-PEPLGNLTNLKSLDLSNNQLT--DL-PEELGNLTNLKELDLSNNQITDLPEPLgnLTNLEELDLSGNQLT 218
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 578833634 469 HVgPEAFLSTPRLRALFLRANRLhmTSIaaEAFLGLPNLRVVDTAGN 515
Cdd:COG4886 219 DL-PEPLANLTNLETLDLSNNQL--TDL--PELGNLTNLEELDLSNN 260
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
78-302 |
2.70e-15 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 74.82 E-value: 2.70e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 78 HLSLQNNQLQELPynELSRLSGLRTLNLHNNLISS-EGLpdeafESLTQLQHlcvahnklsnaglppdafrgseaiatLS 156
Cdd:cd21340 6 HLYLNDKNITKID--NLSLCKNLKVLYLYDNKITKiENL-----EFLTNLTH--------------------------LY 52
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 157 LSNNQLSYLPP--SLpPSLERLHLQNNLISKVprGALSRQTQLRELYLQHNQLtDSGL-----DATTFSKLHSLEYLDLS 229
Cdd:cd21340 53 LQNNQIEKIENleNL-VNLKKLYLGGNRISVV--EGLENLTNLEELHIENQRL-PPGEkltfdPRSLAALSNSLRVLNIS 128
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 578833634 230 HNQLTTVpaglpRTLAILHlgrnrirqveaarlhgarGLRYLLLQHNQLGSSGLPAGALRPLRGLHTLHLYGN 302
Cdd:cd21340 129 GNNIDSL-----EPLAPLR------------------NLEQLDASNNQISDLEELLDLLSSWPSLRELDLTGN 178
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
61-312 |
3.35e-15 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 78.59 E-value: 3.35e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 61 DGLDLRVFPDNITRAAQHLSLQNNQLQELPYNelsrLSG-LRTLNLHNNLISS--EGLPDeafesltQLQHLCVAHNKLS 137
Cdd:PRK15370 186 KILGLTTIPACIPEQITTLILDNNELKSLPEN----LQGnIKTLYANSNQLTSipATLPD-------TIQEMELSINRIT 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 138 NagLPPdafRGSEAIATLSLSNNQLSYLPPSLPPSLERLHLQNNLISKVPRGALSRQTqlrELYLQHNQLTdsGLDATTF 217
Cdd:PRK15370 255 E--LPE---RLPSALQSLDLFHNKISCLPENLPEELRYLSVYDNSIRTLPAHLPSGIT---HLNVQSNSLT--ALPETLP 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 218 SKLHSLEYLDlshNQLTTVPAGLPRTLAILHLGRNRIRQVEAARlhgARGLRYLLLQHNQLGS--SGLPAgalrplrGLH 295
Cdd:PRK15370 325 PGLKTLEAGE---NALTSLPASLPPELQVLDVSKNQITVLPETL---PPTITTLDVSRNALTNlpENLPA-------ALQ 391
|
250
....*....|....*..
gi 578833634 296 TLHLYGNGLDRVPPALP 312
Cdd:PRK15370 392 IMQASRNNLVRLPESLP 408
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
226-536 |
9.14e-14 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 73.96 E-value: 9.14e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 226 LDLSHNQLTTVPAGLPRTLAILHLGRNRIRQVeAARLHGarglrylllqhnqlgssglpagalrplrGLHTLHLYGNGLD 305
Cdd:PRK15370 183 LRLKILGLTTIPACIPEQITTLILDNNELKSL-PENLQG----------------------------NIKTLYANSNQLT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 306 RVPPALPRRLRALVLPHNHVaalgardlvatpglTELNlayNRLASArvhhrafrrlraLRSLDLAGNQLTRLPMGLPTG 385
Cdd:PRK15370 234 SIPATLPDTIQEMELSINRI--------------TELP---ERLPSA------------LQSLDLFHNKISCLPENLPEE 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 386 LRTLQLQRNQLRMLePEPLAglDQLRELSLAHNRLRV--GDIGPGtwhelqaLQMLDLSHNELSFVPPDLPEALEELHLE 463
Cdd:PRK15370 285 LRYLSVYDNSIRTL-PAHLP--SGITHLNVQSNSLTAlpETLPPG-------LKTLEAGENALTSLPASLPPELQVLDVS 354
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 578833634 464 GNRIGhVGPEAFlsTPRLRALFLRANrlhmtsiaaeAFLGLPN-----LRVVDTAGNPeqvLIRLPPTTPRGpRAGGP 536
Cdd:PRK15370 355 KNQIT-VLPETL--PPTITTLDVSRN----------ALTNLPEnlpaaLQIMQASRNN---LVRLPESLPHF-RGEGP 415
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
129-420 |
2.03e-12 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 69.81 E-value: 2.03e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 129 LCVAHNKLSN-AGLPPDafrgseaIATLSLSNNQLSYLPpSLPPSLERLHLQNNLISKVPrgalSRQTQLRELYLQHNQL 207
Cdd:PRK15387 227 LVIPDNNLTSlPALPPE-------LRTLEVSGNQLTSLP-VLPPGLLELSIFSNPLTHLP----ALPSGLCKLWIFGNQL 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 208 TDSGLDATtfsklhSLEYLDLSHNQLTTVPAgLPRTLAILHLGRNRIRQVEAArlhgARGLRYLLLQHNQLGS-SGLPAG 286
Cdd:PRK15387 295 TSLPVLPP------GLQELSVSDNQLASLPA-LPSELCKLWAYNNQLTSLPTL----PSGLQELSVSDNQLASlPTLPSE 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 287 alrplrgLHTLHLYGNGLDRVPpALPRrlralvlphnhvaalgardlvatpGLTELNLAYNRLASARVhhrafrRLRALR 366
Cdd:PRK15387 364 -------LYKLWAYNNRLTSLP-ALPS------------------------GLKELIVSGNRLTSLPV------LPSELK 405
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 578833634 367 SLDLAGNQLTRLPMgLPTGLRTLQLQRNQLRMLePEPLAGLDQLRELSLAHNRL 420
Cdd:PRK15387 406 ELMVSGNRLTSLPM-LPSGLLSLSVYRNQLTRL-PESLIHLSSETTVNLEGNPL 457
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
155-343 |
3.87e-12 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 65.96 E-value: 3.87e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 155 LSLSNNQLSYLP-PSLPPSLERLHLQNNLISKVPrgALSRQTQLRELYLQHNQLTD-SGLDAttfskLHSLEYLDLSHNQ 232
Cdd:cd21340 7 LYLNDKNITKIDnLSLCKNLKVLYLYDNKITKIE--NLEFLTNLTHLYLQNNQIEKiENLEN-----LVNLKKLYLGGNR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 233 LTTVpAGL--PRTLAILHLGRNRIRQ-----VEAARLHG-ARGLRYLLLQHNQLGSSglpaGALRPLRGLHTLHLYGNGL 304
Cdd:cd21340 80 ISVV-EGLenLTNLEELHIENQRLPPgekltFDPRSLAAlSNSLRVLNISGNNIDSL----EPLAPLRNLEQLDASNNQI 154
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 578833634 305 DRVPPALP-----RRLRALVLPHNHVAAL-GARD--LVATPGLTELN 343
Cdd:cd21340 155 SDLEELLDllsswPSLRELDLTGNPVCKKpKYRDkiILASKSLEVLD 201
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
78-237 |
8.67e-11 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 61.73 E-value: 8.67e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 78 HLSLQNNQLQELPYneLSRLSGLRTLNLHNNLISS-EGLpdeafESLTQLQHLcvahnKLSNAGLPPD---AFrGSEAIA 153
Cdd:cd21340 50 HLYLQNNQIEKIEN--LENLVNLKKLYLGGNRISVvEGL-----ENLTNLEEL-----HIENQRLPPGeklTF-DPRSLA 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 154 TLSlsnnqlsylppslpPSLERLHLQNNLISKVprGALSRQTQLRELYLQHNQLTDSGLDATTFSKLHSLEYLDLSHNQL 233
Cdd:cd21340 117 ALS--------------NSLRVLNISGNNIDSL--EPLAPLRNLEQLDASNNQISDLEELLDLLSSWPSLRELDLTGNPV 180
|
....
gi 578833634 234 TTVP 237
Cdd:cd21340 181 CKKP 184
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
171-233 |
9.06e-11 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 57.53 E-value: 9.06e-11
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 578833634 171 PSLERLHLQNNLISKVPRGALSRQTQLRELYLQHNQLTdsGLDATTFSKLHSLEYLDLSHNQL 233
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLT--TLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
74-349 |
9.45e-11 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 63.14 E-value: 9.45e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 74 RAAQHLSLQNNQLQELPYNELSRLSGLRTLNlhnnlisseglpdeafesltQLQHLcvahnKLSNAGLPPDafrGSEAIA 153
Cdd:cd00116 51 PSLKELCLSLNETGRIPRGLQSLLQGLTKGC--------------------GLQEL-----DLSDNALGPD---GCGVLE 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 154 TLSLSnnqlsylppslpPSLERLHLQNNLISK-----VPRGALSRQTQLRELYLQHNQLTDSGLDAT--TFSKLHSLEYL 226
Cdd:cd00116 103 SLLRS------------SSLQELKLNNNGLGDrglrlLAKGLKDLPPALEKLVLGRNRLEGASCEALakALRANRDLKEL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 227 DLSHNQLTtvPAGLPRTLAILHLGRNrirqveaarlhgargLRYLLLQHNQLGSSG--LPAGALRPLRGLHTLHLYGNGL 304
Cdd:cd00116 171 NLANNGIG--DAGIRALAEGLKANCN---------------LEVLDLNNNGLTDEGasALAETLASLKSLEVLNLGDNNL 233
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 578833634 305 DRVP--------PALPRRLRALVLPHNHVAALGARDLV----ATPGLTELNLAYNRL 349
Cdd:cd00116 234 TDAGaaalasalLSPNISLLTLSLSCNDITDDGAKDLAevlaEKESLLELDLRGNKF 290
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
25-233 |
3.92e-10 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 61.22 E-value: 3.92e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 25 AGLEDAAFPHLGESLQPL-PRACPLRCSCPRVDTVDCDGLdLRVFPDNitRAAQHLSLQNNQLQE--LPY--NELSRLSG 99
Cdd:cd00116 118 NGLGDRGLRLLAKGLKDLpPALEKLVLGRNRLEGASCEAL-AKALRAN--RDLKELNLANNGIGDagIRAlaEGLKANCN 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 100 LRTLNLHNNLISSEGLPD--EAFESLTQLQHLCVAHNKLSNAGlppdafrgseaIATLSLSNnqlsylpPSLPPSLERLH 177
Cdd:cd00116 195 LEVLDLNNNGLTDEGASAlaETLASLKSLEVLNLGDNNLTDAG-----------AAALASAL-------LSPNISLLTLS 256
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 578833634 178 LQNNLI----SKVPRGALSRQTQLRELYLQHNQLTDSG---LDATTFSKLHSLEYLDLSHNQL 233
Cdd:cd00116 257 LSCNDItddgAKDLAEVLAEKESLLELDLRGNKFGEEGaqlLAESLLEPGNELESLWVKDDSF 319
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
66-349 |
8.79e-10 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 60.96 E-value: 8.79e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 66 RVFPDNITRAAQHLSLQNNQLQELPYNELSRLSG---LRTLNLHNNLISSEGLPD--EAFESLTQLQHLCVAHNKLSNAG 140
Cdd:COG5238 145 QVLKDPLGGNAVHLLGLAARLGLLAAISMAKALQnnsVETVYLGCNQIGDEGIEElaEALTQNTTVTTLWLKRNPIGDEG 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 141 LP--PDAFRGSEAIATLSLSNNQLS---------YLppSLPPSLERLHLQNNLIS----KVPRGALSRQTQLRELYLQHN 205
Cdd:COG5238 225 AEilAEALKGNKSLTTLDLSNNQIGdegvialaeAL--KNNTTVETLYLSGNQIGaegaIALAKALQGNTTLTSLDLSVN 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 206 QLTDSGldATTFSKLhsleyldLSHNQlttvpaglprTLAILHLGRNRIRQVEAARLhgarglrylllqhnqlgssglpA 285
Cdd:COG5238 303 RIGDEG--AIALAEG-------LQGNK----------TLHTLNLAYNGIGAQGAIAL----------------------A 341
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 578833634 286 GALRPLRGLHTLHLYGNGLDrvppalprrlralvlphNHVAALGARDLVATPGLTELNLAYNRL 349
Cdd:COG5238 342 KALQENTTLHSLDLSDNQIG-----------------DEGAIALAKYLEGNTTLRELNLGKNNI 388
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
92-491 |
1.33e-09 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 61.02 E-value: 1.33e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 92 NELSRLSGLrtlNLHNNLISSEGLPdeAFESLTQLQHLCVAHNKLSnAGLPPDAFRGSEAIATLSLSNNQLS-YLPPSLP 170
Cdd:PLN00113 66 NNSSRVVSI---DLSGKNISGKISS--AIFRLPYIQTINLSNNQLS-GPIPDDIFTTSSSLRYLNLSNNNFTgSIPRGSI 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 171 PSLERLHLQNNLIS-KVPR--GALSRqtqLRELYLQHNQLTdsGLDATTFSKLHSLEYLDLSHNQLTtvpAGLPRTLAIL 247
Cdd:PLN00113 140 PNLETLDLSNNMLSgEIPNdiGSFSS---LKVLDLGGNVLV--GKIPNSLTNLTSLEFLTLASNQLV---GQIPRELGQM 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 248 hlgrnrirqveaarlhgaRGLRYLLLQHNQLgSSGLPAgalrplrglhtlhlygngldrvppalprrlralvlphnhvaA 327
Cdd:PLN00113 212 ------------------KSLKWIYLGYNNL-SGEIPY-----------------------------------------E 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 328 LGardlvatpGLTELNlaynrlasarvhhrafrrlralrSLDLAGNQLTrlpmglptglrtlqlqrNQLrmlePEPLAGL 407
Cdd:PLN00113 232 IG--------GLTSLN-----------------------HLDLVYNNLT-----------------GPI----PSSLGNL 259
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 408 DQLRELSLAHNRLrVGDIGPGTWhELQALQMLDLSHNELSFVPPDLP---EALEELHLEGNRIGHVGPEAFLSTPRLRAL 484
Cdd:PLN00113 260 KNLQYLFLYQNKL-SGPIPPSIF-SLQKLISLDLSDNSLSGEIPELViqlQNLEILHLFSNNFTGKIPVALTSLPRLQVL 337
|
....*..
gi 578833634 485 FLRANRL 491
Cdd:PLN00113 338 QLWSNKF 344
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
384-446 |
4.49e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 52.53 E-value: 4.49e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 578833634 384 TGLRTLQLQRNQLRMLEPEPLAGLDQLRELSLAHNRLRVgdIGPGTWHELQALQMLDLSHNEL 446
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTT--LSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
226-508 |
2.11e-08 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 57.09 E-value: 2.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 226 LDLSHNQLTTVPAGLPRTLAILHLGRNRIRQVEAArlhgARGLRYLLLQHNQLGSsgLPAgaLRPlrGLHTLHLYGNGLD 305
Cdd:PRK15387 206 LNVGESGLTTLPDCLPAHITTLVIPDNNLTSLPAL----PPELRTLEVSGNQLTS--LPV--LPP--GLLELSIFSNPLT 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 306 RVPpALPRRLRALVLPHNHVAALGardlVATPGLTELNLAYNRLASarvhhrAFRRLRALRSLDLAGNQLTRLPMgLPTG 385
Cdd:PRK15387 276 HLP-ALPSGLCKLWIFGNQLTSLP----VLPPGLQELSVSDNQLAS------LPALPSELCKLWAYNNQLTSLPT-LPSG 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 386 LRTLQLQRNQLRMLEPEPlaglDQLRELSLAHNRLRVgdigpgtwhelqalqmldlshnelsfvPPDLPEALEELHLEGN 465
Cdd:PRK15387 344 LQELSVSDNQLASLPTLP----SELYKLWAYNNRLTS---------------------------LPALPSGLKELIVSGN 392
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 578833634 466 RIGHVGpeafLSTPRLRALFLRANRLHMTSIAAEAFLGLPNLR 508
Cdd:PRK15387 393 RLTSLP----VLPSELKELMVSGNRLTSLPMLPSGLLSLSVYR 431
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
195-254 |
6.63e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 49.45 E-value: 6.63e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 578833634 195 TQLRELYLQHNQLTDsgLDATTFSKLHSLEYLDLSHNQLTTVP----AGLPRtLAILHLGRNRI 254
Cdd:pfam13855 1 PNLRSLDLSNNRLTS--LDDGAFKGLSNLKVLDLSNNLLTTLSpgafSGLPS-LRYLDLSGNRL 61
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
65-311 |
1.35e-07 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 54.40 E-value: 1.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 65 LRVFPDNITRAAQHLSLQNNQLQELPynelSRLSGLRTLNLH-NNLISSEGLPDEAFEsltqlqhLCVAHNKLSNAGLPP 143
Cdd:PRK15387 213 LTTLPDCLPAHITTLVIPDNNLTSLP----ALPPELRTLEVSgNQLTSLPVLPPGLLE-------LSIFSNPLTHLPALP 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 144 dafrgsEAIATLSLSNNQLSYLPpSLPPSLERLHLQNNLISKVPrgalSRQTQLRELYLQHNQLtdsgldaTTFSKLHS- 222
Cdd:PRK15387 282 ------SGLCKLWIFGNQLTSLP-VLPPGLQELSVSDNQLASLP----ALPSELCKLWAYNNQL-------TSLPTLPSg 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 223 LEYLDLSHNQLTTVPAgLPRTLAILHLGRNRIRQVEAArlhgARGLRYLLLQHNQLGSSGLPAGALRPL----------- 291
Cdd:PRK15387 344 LQELSVSDNQLASLPT-LPSELYKLWAYNNRLTSLPAL----PSGLKELIVSGNRLTSLPVLPSELKELmvsgnrltslp 418
|
250 260
....*....|....*....|...
gi 578833634 292 ---RGLHTLHLYGNGLDRVPPAL 311
Cdd:PRK15387 419 mlpSGLLSLSVYRNQLTRLPESL 441
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
368-516 |
2.17e-07 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 51.71 E-value: 2.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 368 LDLAGNQLTRLPmGLP--TGLRTLQLQRNQLRMLEPepLAGLDQLRELSLAHNRLRV--GdigpgtWHELQALQMLDLSH 443
Cdd:cd21340 29 LYLYDNKITKIE-NLEflTNLTHLYLQNNQIEKIEN--LENLVNLKKLYLGGNRISVveG------LENLTNLEELHIEN 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 444 NELsfvPPDLP------------EALEELHLEGNRIGHVGPEAFLStpRLRALFLRANRLHMTSIAAEAFLGLPNLRVVD 511
Cdd:cd21340 100 QRL---PPGEKltfdprslaalsNSLRVLNISGNNIDSLEPLAPLR--NLEQLDASNNQISDLEELLDLLSSWPSLRELD 174
|
....*
gi 578833634 512 TAGNP 516
Cdd:cd21340 175 LTGNP 179
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
457-516 |
9.00e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 45.98 E-value: 9.00e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 457 LEELHLEGNRIGHVGPEAFLSTPRLRALFLRANRLhmTSIAAEAFLGLPNLRVVDTAGNP 516
Cdd:pfam13855 3 LRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL--TTLSPGAFSGLPSLRYLDLSGNR 60
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
77-136 |
9.67e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 43.28 E-value: 9.67e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 77 QHLSLQNNQLQELPYNELSRLSGLRTLNLHNNLISSegLPDEAFESLTQLQHLCVAHNKL 136
Cdd:pfam13855 4 RSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTT--LSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
436-491 |
9.86e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 43.28 E-value: 9.86e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 578833634 436 LQMLDLSHNELSFVPPDL---PEALEELHLEGNRIGHVGPEAFLSTPRLRALFLRANRL 491
Cdd:pfam13855 3 LRSLDLSNNRLTSLDDGAfkgLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
200-491 |
1.07e-05 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 47.86 E-value: 1.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 200 LYLQHNQLTDSGLDATTFSKLHSLEYLDLSHNQLTTVPA-------GLPRTLAILHLGRNRI--RQVE--AARLHGARGL 268
Cdd:COG5238 159 LGLAARLGLLAAISMAKALQNNSVETVYLGCNQIGDEGIeelaealTQNTTVTTLWLKRNPIgdEGAEilAEALKGNKSL 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 269 RYLLLQHNQLGSSGLP--AGALRPLRGLHTLHLYGNGLDrvppalprrlralvlpHNHVAALgARDLVATPGLTELNLAY 346
Cdd:COG5238 239 TTLDLSNNQIGDEGVIalAEALKNNTTVETLYLSGNQIG----------------AEGAIAL-AKALQGNTTLTSLDLSV 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 347 NRLASArvhhrafrrlralrsldlagnqltrlpmglptGLRTLQlqrnqlrmlepEPLAGLDQLRELSLAHNRlrvgdIG 426
Cdd:COG5238 302 NRIGDE--------------------------------GAIALA-----------EGLQGNKTLHTLNLAYNG-----IG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 427 PGTWHEL-QALQM------LDLSHNELSFVPPD-LPEALE------ELHLEGNRIGHVGPEAF---LSTPRLRALFLRAN 489
Cdd:COG5238 334 AQGAIALaKALQEnttlhsLDLSDNQIGDEGAIaLAKYLEgnttlrELNLGKNNIGKQGAEALidaLQTNRLHTLILDGN 413
|
..
gi 578833634 490 RL 491
Cdd:COG5238 414 LI 415
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
154-207 |
1.08e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 42.90 E-value: 1.08e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 578833634 154 TLSLSNNQLSYLPPSL---PPSLERLHLQNNLISKVPRGALSRQTQLRELYLQHNQL 207
Cdd:pfam13855 5 SLDLSNNRLTSLDDGAfkgLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
77-183 |
2.63e-05 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 47.15 E-value: 2.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 77 QHLSLQNNQLQELPYNELSRLSGLRTLNLHNNLISSEgLPDEaFESLTQLQHLCVAHNKLSnaGLPPDAFRGSEAIATLS 156
Cdd:PLN00113 478 ENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGE-IPDE-LSSCKKLVSLDLSHNQLS--GQIPASFSEMPVLSQLD 553
|
90 100 110
....*....|....*....|....*....|
gi 578833634 157 LSNNQLS-YLPPSLP--PSLERLHLQNNLI 183
Cdd:PLN00113 554 LSQNQLSgEIPKNLGnvESLVQVNISHNHL 583
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
38-185 |
4.55e-05 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 46.23 E-value: 4.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 38 SLQPLPRACPlrcscPRVDTVDCDGLDLRVFPDNITRAAQHLSLQNNQLQELPynelsrlsglrtlnlhnnlissEGLPd 117
Cdd:PRK15370 315 SLTALPETLP-----PGLKTLEAGENALTSLPASLPPELQVLDVSKNQITVLP----------------------ETLP- 366
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 578833634 118 eafeslTQLQHLCVAHNKLSNagLPPDAfrgSEAIATLSLSNNQLSYLPPSLP------PSLERLHLQNNLISK 185
Cdd:PRK15370 367 ------PTITTLDVSRNALTN--LPENL---PAALQIMQASRNNLVRLPESLPhfrgegPQPTRIIVEYNPFSE 429
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
124-183 |
2.84e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 39.04 E-value: 2.84e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 578833634 124 TQLQHLCVAHNKLSNagLPPDAFRGSEAIATLSLSNNQLSYLPP---SLPPSLERLHLQNNLI 183
Cdd:pfam13855 1 PNLRSLDLSNNRLTS--LDDGAFKGLSNLKVLDLSNNLLTTLSPgafSGLPSLRYLDLSGNRL 61
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
389-508 |
2.99e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 43.65 E-value: 2.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 389 LQLQRNQLRMLEPEPLAGLDQLRELSLAHNRLRvGDIgPGTWHELQALQMLDLSHNELS-FVPPDLPE--ALEELHLEGN 465
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIR-GNI-PPSLGSITSLEVLDLSYNSFNgSIPESLGQltSLRILNLNGN 500
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 578833634 466 RIGHVGPEAflstprLRALFLRANRLHMTSIAaeAFLGLPNLR 508
Cdd:PLN03150 501 SLSGRVPAA------LGGRLLHRASFNFTDNA--GLCGIPGLR 535
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
195-235 |
6.41e-04 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 37.61 E-value: 6.41e-04
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 578833634 195 TQLRELYLQHNQLTDSGLdattFSKLHSLEYLDLSHNQLTT 235
Cdd:pfam12799 1 PNLEVLDLSNNQITDIPP----LAKLPNLETLDLSGNNKIT 37
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
242-304 |
8.55e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.50 E-value: 8.55e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 578833634 242 RTLAILHLGRNRIRQVEAARLHGARGLRYLLLQHNQLgsSGLPAGALRPLRGLHTLHLYGNGL 304
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL--TTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
374-516 |
2.05e-03 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 40.42 E-value: 2.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 374 QLTRLPMGLPT--GLRTLQLQRNQLRMLEPEPLAGLDQ---LRELSLAHNRL--RVGDIGPGTWHELQ-ALQMLDLSHNE 445
Cdd:cd00116 69 GLQSLLQGLTKgcGLQELDLSDNALGPDGCGVLESLLRsssLQELKLNNNGLgdRGLRLLAKGLKDLPpALEKLVLGRNR 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 446 LSFVP-PDLPEA------LEELHLEGNRIGHVG----PEAFLSTPRLRALFLRANRLHMT--SIAAEAFLGLPNLRVVDT 512
Cdd:cd00116 149 LEGAScEALAKAlranrdLKELNLANNGIGDAGiralAEGLKANCNLEVLDLNNNGLTDEgaSALAETLASLKSLEVLNL 228
|
....
gi 578833634 513 AGNP 516
Cdd:cd00116 229 GDNN 232
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
199-515 |
3.54e-03 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 39.65 E-value: 3.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 199 ELYLQHNQLTDSGLdATTFSKLHSLEYLDLSHNQLTTVpaglprtlailhlgrnRIRQVeAARLHGARGLRYLLLQHNQL 278
Cdd:cd00116 2 QLSLKGELLKTERA-TELLPKLLCLQVLRLEGNTLGEE----------------AAKAL-ASALRPQPSLKELCLSLNET 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 279 GSS----GLPAGALRPLRGLHTLHLYGNGLDrvpPALPRRLRALVLphnhvaalgardlvaTPGLTELNLAYNRLAsarv 354
Cdd:cd00116 64 GRIprglQSLLQGLTKGCGLQELDLSDNALG---PDGCGVLESLLR---------------SSSLQELKLNNNGLG---- 121
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 355 hhrafrrlralrslDLAGNQLTRLPMGLPTGLRTLQLQRNQLRMLEPEPLAGLDQ----LRELSLAHNRLRvgdiGPGTW 430
Cdd:cd00116 122 --------------DRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRanrdLKELNLANNGIG----DAGIR 183
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 431 H------ELQALQMLDLSHN--------ELSFVPPDLPeALEELHLEGNRIGHVGPEAFLSTPRLRALFLRANRLHMTSI 496
Cdd:cd00116 184 AlaeglkANCNLEVLDLNNNgltdegasALAETLASLK-SLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDI 262
|
330 340
....*....|....*....|....*.
gi 578833634 497 AAEAFLGL-------PNLRVVDTAGN 515
Cdd:cd00116 263 TDDGAKDLaevlaekESLLELDLRGN 288
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
79-169 |
5.22e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 39.41 E-value: 5.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578833634 79 LSLQNNQLQELPYNELSRLSGLRTLNLHNNLIssEGLPDEAFESLTQLQHLCVAHNKLSnaGLPPDAFRGSEAIATLSLS 158
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSI--RGNIPPSLGSITSLEVLDLSYNSFN--GSIPESLGQLTSLRILNLN 498
|
90
....*....|..
gi 578833634 159 NNQLS-YLPPSL 169
Cdd:PLN03150 499 GNSLSgRVPAAL 510
|
|
| |
