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Conserved domains on  [gi|578838699|ref|XP_006724828|]
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zinc finger protein 280C isoform X1 [Homo sapiens]

Protein Classification

zinc finger protein 280A/B/C/D( domain architecture ID 10619755)

zinc finger protein 280A/B/C/D may function as a transcription factor

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF4195 pfam13836
Domain of unknown function (DUF4195); This family is found at the N-terminus of metazoan ...
46-227 1.46e-85

Domain of unknown function (DUF4195); This family is found at the N-terminus of metazoan proteins that carry PHD-like zinc-finger domains. The function is not known.


:

Pssm-ID: 463993 [Multi-domain]  Cd Length: 184  Bit Score: 266.62  E-value: 1.46e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578838699   46 IFVGEISSSKPAISNILNRGHSSSSSKGIKSEPHSPGIPEIFRTASQRCRDPPSNPVAASP-RFHLVSKSSQSSVTVENA 124
Cdd:pfam13836   1 IFVGEISSSKPAISNILNRVNPGSSSRRIKNGHLSPGIAHIFKPTSQHYVTPTSNPVAALPvSFHPESRSSDSSVIVQPL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578838699  125 SKPDFTKNS-QVGSDNSSILLFDSTQESLPPSQDIPAIFREGMKNTSYVLKHPSTSKVNSVTPKKPKTSEDVPQINPSTS 203
Cdd:pfam13836  81 SKPDYKKNSpQVVSDNSSDLLFDLTQDTVPQSQVGPALSVEGMNESSFVSKRPSTSEVNSVNPKKPKLSEGISGTNSSAS 160
                         170       180
                  ....*....|....*....|....
gi 578838699  204 LPLIGSPPVTSSQVMLSKGTNTSS 227
Cdd:pfam13836 161 SPSIKSPSVTSSQVTPSKGTNTSS 184
 
Name Accession Description Interval E-value
DUF4195 pfam13836
Domain of unknown function (DUF4195); This family is found at the N-terminus of metazoan ...
46-227 1.46e-85

Domain of unknown function (DUF4195); This family is found at the N-terminus of metazoan proteins that carry PHD-like zinc-finger domains. The function is not known.


Pssm-ID: 463993 [Multi-domain]  Cd Length: 184  Bit Score: 266.62  E-value: 1.46e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578838699   46 IFVGEISSSKPAISNILNRGHSSSSSKGIKSEPHSPGIPEIFRTASQRCRDPPSNPVAASP-RFHLVSKSSQSSVTVENA 124
Cdd:pfam13836   1 IFVGEISSSKPAISNILNRVNPGSSSRRIKNGHLSPGIAHIFKPTSQHYVTPTSNPVAALPvSFHPESRSSDSSVIVQPL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578838699  125 SKPDFTKNS-QVGSDNSSILLFDSTQESLPPSQDIPAIFREGMKNTSYVLKHPSTSKVNSVTPKKPKTSEDVPQINPSTS 203
Cdd:pfam13836  81 SKPDYKKNSpQVVSDNSSDLLFDLTQDTVPQSQVGPALSVEGMNESSFVSKRPSTSEVNSVNPKKPKLSEGISGTNSSAS 160
                         170       180
                  ....*....|....*....|....
gi 578838699  204 LPLIGSPPVTSSQVMLSKGTNTSS 227
Cdd:pfam13836 161 SPSIKSPSVTSSQVTPSKGTNTSS 184
 
Name Accession Description Interval E-value
DUF4195 pfam13836
Domain of unknown function (DUF4195); This family is found at the N-terminus of metazoan ...
46-227 1.46e-85

Domain of unknown function (DUF4195); This family is found at the N-terminus of metazoan proteins that carry PHD-like zinc-finger domains. The function is not known.


Pssm-ID: 463993 [Multi-domain]  Cd Length: 184  Bit Score: 266.62  E-value: 1.46e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578838699   46 IFVGEISSSKPAISNILNRGHSSSSSKGIKSEPHSPGIPEIFRTASQRCRDPPSNPVAASP-RFHLVSKSSQSSVTVENA 124
Cdd:pfam13836   1 IFVGEISSSKPAISNILNRVNPGSSSRRIKNGHLSPGIAHIFKPTSQHYVTPTSNPVAALPvSFHPESRSSDSSVIVQPL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578838699  125 SKPDFTKNS-QVGSDNSSILLFDSTQESLPPSQDIPAIFREGMKNTSYVLKHPSTSKVNSVTPKKPKTSEDVPQINPSTS 203
Cdd:pfam13836  81 SKPDYKKNSpQVVSDNSSDLLFDLTQDTVPQSQVGPALSVEGMNESSFVSKRPSTSEVNSVNPKKPKLSEGISGTNSSAS 160
                         170       180
                  ....*....|....*....|....
gi 578838699  204 LPLIGSPPVTSSQVMLSKGTNTSS 227
Cdd:pfam13836 161 SPSIKSPSVTSSQVTPSKGTNTSS 184
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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