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Conserved domains on  [gi|755498552|ref|XP_011237559|]
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lysosomal acid phosphatase isoform X1 [Mus musculus]

Protein Classification

histidine phosphatase family protein( domain architecture ID 27749)

histidine phosphatase family protein contains a conserved His residue that is transiently phosphorylated during the catalytic cycle

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
HP super family cl11399
Histidine phosphatase domain found in a functionally diverse set of proteins, mostly ...
18-312 7.31e-46

Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction; Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phosphorelay signaling system; phytases scavenge phosphate from extracellular sources. Deficiency and mutation in many of the human members result in disease, for example erythrocyte BPGM deficiency is a disease associated with a decrease in the concentration of 2,3-BPG. Clinical applications include the use of prostatic acid phosphatase (PAP) as a serum marker for prostate cancer. Agricultural applications include the addition of phytases to animal feed.


The actual alignment was detected with superfamily member pfam00328:

Pssm-ID: 472174 [Multi-domain]  Cd Length: 356  Bit Score: 161.42  E-value: 7.31e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755498552   18 LQQLYRHGDRSPVKTYPKD-------------------------PYQEEKWPQGFGQLTKEGMLQHWELGQALRQRYH-G 71
Cdd:pfam00328   5 VQVVSRHGDRTPTQKFKKSyeslifkilslagslegklsfpgdyRYFKLQYTLGWGGLTPSGRVQAENLGRYFRQRYVgG 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755498552   72 FLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNEVQHFNPNISWQPIPVHTVP---ITEDRLLKFPLGPCPRYEQ-L 147
Cdd:pfam00328  85 LLRDGYNAKDIYIRASSEGRVIASAQAFAEGLFGPEGEDVDKDLLDDSNVAKVTIDedkKALANNLTAGYCSCPAFEWpL 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755498552  148 QNETRQTPEYqnrSIQNAQFLNMVANE-----TGLTNVTLETIWNVYDTLFCEQ--THGLLLPPWASPQTVQRLSQLKDF 220
Cdd:pfam00328 165 QLLKQVDEAL---DYYLPVFLEPIAKRleqlcPGETNLTADDVWALLFLCFFETnkADLSPFCDLFTEEDALHNEYLLDL 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755498552  221 SFLF-LFGIHEQVqkARLQGGVLLAQILKNLTL------MATTSQFPKLLVYSAHDTTLVALQMALNVYNG--------- 284
Cdd:pfam00328 242 EEYYgLAGIGNEL--KKTIGGPLLNELLARLTNdlvctqEATFPLDAKLYLYFTHDTTIYSLLSALGLFDDlpplsslrv 319
                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 755498552  285 -------KQAPYASCHIFELYQ--EDNGNFSVEMYFR 312
Cdd:pfam00328 320 ldgysasGEVPYGARLVFELYEcsSEKDSRYVRLLLN 356
 
Name Accession Description Interval E-value
His_Phos_2 pfam00328
Histidine phosphatase superfamily (branch 2); The histidine phosphatase superfamily is so ...
18-312 7.31e-46

Histidine phosphatase superfamily (branch 2); The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches.The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated.


Pssm-ID: 395259 [Multi-domain]  Cd Length: 356  Bit Score: 161.42  E-value: 7.31e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755498552   18 LQQLYRHGDRSPVKTYPKD-------------------------PYQEEKWPQGFGQLTKEGMLQHWELGQALRQRYH-G 71
Cdd:pfam00328   5 VQVVSRHGDRTPTQKFKKSyeslifkilslagslegklsfpgdyRYFKLQYTLGWGGLTPSGRVQAENLGRYFRQRYVgG 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755498552   72 FLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNEVQHFNPNISWQPIPVHTVP---ITEDRLLKFPLGPCPRYEQ-L 147
Cdd:pfam00328  85 LLRDGYNAKDIYIRASSEGRVIASAQAFAEGLFGPEGEDVDKDLLDDSNVAKVTIDedkKALANNLTAGYCSCPAFEWpL 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755498552  148 QNETRQTPEYqnrSIQNAQFLNMVANE-----TGLTNVTLETIWNVYDTLFCEQ--THGLLLPPWASPQTVQRLSQLKDF 220
Cdd:pfam00328 165 QLLKQVDEAL---DYYLPVFLEPIAKRleqlcPGETNLTADDVWALLFLCFFETnkADLSPFCDLFTEEDALHNEYLLDL 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755498552  221 SFLF-LFGIHEQVqkARLQGGVLLAQILKNLTL------MATTSQFPKLLVYSAHDTTLVALQMALNVYNG--------- 284
Cdd:pfam00328 242 EEYYgLAGIGNEL--KKTIGGPLLNELLARLTNdlvctqEATFPLDAKLYLYFTHDTTIYSLLSALGLFDDlpplsslrv 319
                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 755498552  285 -------KQAPYASCHIFELYQ--EDNGNFSVEMYFR 312
Cdd:pfam00328 320 ldgysasGEVPYGARLVFELYEcsSEKDSRYVRLLLN 356
HP_HAP_like cd07061
Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His ...
18-312 9.33e-46

Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction; Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been shown in mouse models to suppress pain by functioning as an ecto-5prime-nucleotidase. In vivo it dephosphorylates extracellular adenosine monophosphate (AMP) generating adenosine,and leading to the activation of A1-adenosine receptors in dorsal spinal cord.


Pssm-ID: 132717 [Multi-domain]  Cd Length: 242  Bit Score: 157.92  E-value: 9.33e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755498552  18 LQQLYRHGDRSPvktypkdpyqeekwpqgfGQLTKEGMLQHWELGQALRQRY-HGFLNTSYHRQEVYVRSTDFDRTLMSA 96
Cdd:cd07061    5 VQVLSRHGDRYP------------------GELTPFGRQQAFELGRYFRQRYgELLLLHSYNRSDLYIRSSDSQRTLQSA 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755498552  97 EANLAGLFPPNEvqhfnpnisWQPIPVHTVPITEDRllkfplgpcpryeqlqnetrqtpeyqnrsiqnaqflnmvanetg 176
Cdd:cd07061   67 QAFLAGLFPPDG---------WQPIAVHTIPEEEDD-------------------------------------------- 93
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755498552 177 ltnvtletIWNVYDTLFCEQTHGLLLPPWA---SPQTVQRLSQLKDFSFLFLFGIHEQVqkARLQGGVLLAQILKNLTLM 253
Cdd:cd07061   94 --------VSNLFDLCAYETVAKGYSAPFCdlfTEEEWVKLEYLNDLKFYYGYGPGNPL--ARAQGSPLLNELLARLTNG 163
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 755498552 254 ATTSQ-FP---KLLVYSAHDTTLVALQMALNVYN---------------GKQAPYASCHIFELYQ-EDNGNFSVEMYFR 312
Cdd:cd07061  164 PSGSQtFPldrKLYLYFSHDTTILPLLTALGLFDfaeplppdflrgfseSDYPPFAARLVFELWRcPGDGESYVRVLVN 242
 
Name Accession Description Interval E-value
His_Phos_2 pfam00328
Histidine phosphatase superfamily (branch 2); The histidine phosphatase superfamily is so ...
18-312 7.31e-46

Histidine phosphatase superfamily (branch 2); The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches.The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated.


Pssm-ID: 395259 [Multi-domain]  Cd Length: 356  Bit Score: 161.42  E-value: 7.31e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755498552   18 LQQLYRHGDRSPVKTYPKD-------------------------PYQEEKWPQGFGQLTKEGMLQHWELGQALRQRYH-G 71
Cdd:pfam00328   5 VQVVSRHGDRTPTQKFKKSyeslifkilslagslegklsfpgdyRYFKLQYTLGWGGLTPSGRVQAENLGRYFRQRYVgG 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755498552   72 FLNTSYHRQEVYVRSTDFDRTLMSAEANLAGLFPPNEVQHFNPNISWQPIPVHTVP---ITEDRLLKFPLGPCPRYEQ-L 147
Cdd:pfam00328  85 LLRDGYNAKDIYIRASSEGRVIASAQAFAEGLFGPEGEDVDKDLLDDSNVAKVTIDedkKALANNLTAGYCSCPAFEWpL 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755498552  148 QNETRQTPEYqnrSIQNAQFLNMVANE-----TGLTNVTLETIWNVYDTLFCEQ--THGLLLPPWASPQTVQRLSQLKDF 220
Cdd:pfam00328 165 QLLKQVDEAL---DYYLPVFLEPIAKRleqlcPGETNLTADDVWALLFLCFFETnkADLSPFCDLFTEEDALHNEYLLDL 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755498552  221 SFLF-LFGIHEQVqkARLQGGVLLAQILKNLTL------MATTSQFPKLLVYSAHDTTLVALQMALNVYNG--------- 284
Cdd:pfam00328 242 EEYYgLAGIGNEL--KKTIGGPLLNELLARLTNdlvctqEATFPLDAKLYLYFTHDTTIYSLLSALGLFDDlpplsslrv 319
                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 755498552  285 -------KQAPYASCHIFELYQ--EDNGNFSVEMYFR 312
Cdd:pfam00328 320 ldgysasGEVPYGARLVFELYEcsSEKDSRYVRLLLN 356
HP_HAP_like cd07061
Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His ...
18-312 9.33e-46

Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction; Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been shown in mouse models to suppress pain by functioning as an ecto-5prime-nucleotidase. In vivo it dephosphorylates extracellular adenosine monophosphate (AMP) generating adenosine,and leading to the activation of A1-adenosine receptors in dorsal spinal cord.


Pssm-ID: 132717 [Multi-domain]  Cd Length: 242  Bit Score: 157.92  E-value: 9.33e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755498552  18 LQQLYRHGDRSPvktypkdpyqeekwpqgfGQLTKEGMLQHWELGQALRQRY-HGFLNTSYHRQEVYVRSTDFDRTLMSA 96
Cdd:cd07061    5 VQVLSRHGDRYP------------------GELTPFGRQQAFELGRYFRQRYgELLLLHSYNRSDLYIRSSDSQRTLQSA 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755498552  97 EANLAGLFPPNEvqhfnpnisWQPIPVHTVPITEDRllkfplgpcpryeqlqnetrqtpeyqnrsiqnaqflnmvanetg 176
Cdd:cd07061   67 QAFLAGLFPPDG---------WQPIAVHTIPEEEDD-------------------------------------------- 93
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755498552 177 ltnvtletIWNVYDTLFCEQTHGLLLPPWA---SPQTVQRLSQLKDFSFLFLFGIHEQVqkARLQGGVLLAQILKNLTLM 253
Cdd:cd07061   94 --------VSNLFDLCAYETVAKGYSAPFCdlfTEEEWVKLEYLNDLKFYYGYGPGNPL--ARAQGSPLLNELLARLTNG 163
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 755498552 254 ATTSQ-FP---KLLVYSAHDTTLVALQMALNVYN---------------GKQAPYASCHIFELYQ-EDNGNFSVEMYFR 312
Cdd:cd07061  164 PSGSQtFPldrKLYLYFSHDTTILPLLTALGLFDfaeplppdflrgfseSDYPPFAARLVFELWRcPGDGESYVRVLVN 242
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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