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Conserved domains on  [gi|755558973|ref|XP_011244907|]
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spermatogenesis-associated serine-rich protein 1 isoform X2 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SASRP1 super family cl21026
Spermatogenesis-associated serine-rich protein 1; Spermatogenesis-associated serine-rich ...
 9-103 1.75e-66

Spermatogenesis-associated serine-rich protein 1; Spermatogenesis-associated serine-rich protein 1 is a serine-rich protein differentially expressed during spermatogenesis.


The actual alignment was detected with superfamily member pfam15160:

Pssm-ID: 373611  Cd Length: 236  Bit Score: 202.84  E-value: 1.75e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755558973    9 DIDPRNGIPKLTPGDNPYMFPEQSKEFFKAGATLPPVNFSLGPYEKKFDTFIPLEPLPKIPNLPFWEKEKANNLKNEIKE 88
Cdd:pfam15160 142 DIDPRNGIPKLTPGDNPYMYPEQSKGFHKAGSTLPPVNFSLVPYEKKFDTFIPLEPLPQIPNLPFWVKEKANNLKNEIRE 221

                          90
                  ....*....|....*
gi 755558973   89 VEELDNWQVPMPFLH 103
Cdd:pfam15160 222 VEELDNWQPAVPLLH 236
 
Name Accession Description Interval E-value
SASRP1 pfam15160
Spermatogenesis-associated serine-rich protein 1; Spermatogenesis-associated serine-rich ...
 9-103 1.75e-66

Spermatogenesis-associated serine-rich protein 1; Spermatogenesis-associated serine-rich protein 1 is a serine-rich protein differentially expressed during spermatogenesis.


Pssm-ID: 373611  Cd Length: 236  Bit Score: 202.84  E-value: 1.75e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755558973    9 DIDPRNGIPKLTPGDNPYMFPEQSKEFFKAGATLPPVNFSLGPYEKKFDTFIPLEPLPKIPNLPFWEKEKANNLKNEIKE 88
Cdd:pfam15160 142 DIDPRNGIPKLTPGDNPYMYPEQSKGFHKAGSTLPPVNFSLVPYEKKFDTFIPLEPLPQIPNLPFWVKEKANNLKNEIRE 221

                          90
                  ....*....|....*
gi 755558973   89 VEELDNWQVPMPFLH 103
Cdd:pfam15160 222 VEELDNWQPAVPLLH 236
 
Name Accession Description Interval E-value
SASRP1 pfam15160
Spermatogenesis-associated serine-rich protein 1; Spermatogenesis-associated serine-rich ...
 9-103 1.75e-66

Spermatogenesis-associated serine-rich protein 1; Spermatogenesis-associated serine-rich protein 1 is a serine-rich protein differentially expressed during spermatogenesis.


Pssm-ID: 373611  Cd Length: 236  Bit Score: 202.84  E-value: 1.75e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755558973    9 DIDPRNGIPKLTPGDNPYMFPEQSKEFFKAGATLPPVNFSLGPYEKKFDTFIPLEPLPKIPNLPFWEKEKANNLKNEIKE 88
Cdd:pfam15160 142 DIDPRNGIPKLTPGDNPYMYPEQSKGFHKAGSTLPPVNFSLVPYEKKFDTFIPLEPLPQIPNLPFWVKEKANNLKNEIRE 221

                          90
                  ....*....|....*
gi 755558973   89 VEELDNWQVPMPFLH 103
Cdd:pfam15160 222 VEELDNWQPAVPLLH 236
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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