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myelin transcription factor 1-like protein isoform X1 [Homo sapiens]
List of domain hits
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Name | Accession | Description | Interval | E-value | |||||
MYT1 | pfam08474 | Myelin transcription factor 1; This domain is found in the myelin transcription factor 1 (MYT1) ... |
621-872 | 4.98e-122 | |||||
Myelin transcription factor 1; This domain is found in the myelin transcription factor 1 (MYT1) of chordates. MYT1 contains C2HC zinc finger domains (pfam01530) and is expressed in developing neurons of the central nervous system where it is involved in the selection of neuronal precursor cells. : Pssm-ID: 462489 [Multi-domain] Cd Length: 237 Bit Score: 376.02 E-value: 4.98e-122
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
925-953 | 7.75e-17 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. : Pssm-ID: 460240 Cd Length: 29 Bit Score: 74.88 E-value: 7.75e-17
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
881-909 | 1.64e-16 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. : Pssm-ID: 460240 Cd Length: 29 Bit Score: 73.72 E-value: 1.64e-16
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
31-58 | 1.05e-15 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. : Pssm-ID: 460240 Cd Length: 29 Bit Score: 71.41 E-value: 1.05e-15
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
974-1002 | 1.13e-15 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. : Pssm-ID: 460240 Cd Length: 29 Bit Score: 71.41 E-value: 1.13e-15
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
1028-1055 | 7.21e-15 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. : Pssm-ID: 460240 Cd Length: 29 Bit Score: 69.10 E-value: 7.21e-15
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
549-577 | 5.12e-14 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. : Pssm-ID: 460240 Cd Length: 29 Bit Score: 66.79 E-value: 5.12e-14
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
505-531 | 5.12e-14 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. : Pssm-ID: 460240 Cd Length: 29 Bit Score: 66.79 E-value: 5.12e-14
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Mplasa_alph_rch super family | cl37461 | helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1081-1161 | 4.11e-03 | |||||
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown. The actual alignment was detected with superfamily member TIGR04523: Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 41.54 E-value: 4.11e-03
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Name | Accession | Description | Interval | E-value | |||||
MYT1 | pfam08474 | Myelin transcription factor 1; This domain is found in the myelin transcription factor 1 (MYT1) ... |
621-872 | 4.98e-122 | |||||
Myelin transcription factor 1; This domain is found in the myelin transcription factor 1 (MYT1) of chordates. MYT1 contains C2HC zinc finger domains (pfam01530) and is expressed in developing neurons of the central nervous system where it is involved in the selection of neuronal precursor cells. Pssm-ID: 462489 [Multi-domain] Cd Length: 237 Bit Score: 376.02 E-value: 4.98e-122
|
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
925-953 | 7.75e-17 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. Pssm-ID: 460240 Cd Length: 29 Bit Score: 74.88 E-value: 7.75e-17
|
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
881-909 | 1.64e-16 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. Pssm-ID: 460240 Cd Length: 29 Bit Score: 73.72 E-value: 1.64e-16
|
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
31-58 | 1.05e-15 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. Pssm-ID: 460240 Cd Length: 29 Bit Score: 71.41 E-value: 1.05e-15
|
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
974-1002 | 1.13e-15 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. Pssm-ID: 460240 Cd Length: 29 Bit Score: 71.41 E-value: 1.13e-15
|
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
1028-1055 | 7.21e-15 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. Pssm-ID: 460240 Cd Length: 29 Bit Score: 69.10 E-value: 7.21e-15
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
549-577 | 5.12e-14 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. Pssm-ID: 460240 Cd Length: 29 Bit Score: 66.79 E-value: 5.12e-14
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
505-531 | 5.12e-14 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. Pssm-ID: 460240 Cd Length: 29 Bit Score: 66.79 E-value: 5.12e-14
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Mplasa_alph_rch | TIGR04523 | helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1081-1161 | 4.11e-03 | |||||
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown. Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 41.54 E-value: 4.11e-03
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COG4372 | COG4372 | Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1067-1149 | 6.33e-03 | |||||
Uncharacterized protein, contains DUF3084 domain [Function unknown]; Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.27 E-value: 6.33e-03
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Name | Accession | Description | Interval | E-value | |||||
MYT1 | pfam08474 | Myelin transcription factor 1; This domain is found in the myelin transcription factor 1 (MYT1) ... |
621-872 | 4.98e-122 | |||||
Myelin transcription factor 1; This domain is found in the myelin transcription factor 1 (MYT1) of chordates. MYT1 contains C2HC zinc finger domains (pfam01530) and is expressed in developing neurons of the central nervous system where it is involved in the selection of neuronal precursor cells. Pssm-ID: 462489 [Multi-domain] Cd Length: 237 Bit Score: 376.02 E-value: 4.98e-122
|
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
925-953 | 7.75e-17 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. Pssm-ID: 460240 Cd Length: 29 Bit Score: 74.88 E-value: 7.75e-17
|
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
881-909 | 1.64e-16 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. Pssm-ID: 460240 Cd Length: 29 Bit Score: 73.72 E-value: 1.64e-16
|
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
31-58 | 1.05e-15 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. Pssm-ID: 460240 Cd Length: 29 Bit Score: 71.41 E-value: 1.05e-15
|
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
974-1002 | 1.13e-15 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. Pssm-ID: 460240 Cd Length: 29 Bit Score: 71.41 E-value: 1.13e-15
|
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
1028-1055 | 7.21e-15 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. Pssm-ID: 460240 Cd Length: 29 Bit Score: 69.10 E-value: 7.21e-15
|
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
549-577 | 5.12e-14 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. Pssm-ID: 460240 Cd Length: 29 Bit Score: 66.79 E-value: 5.12e-14
|
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zf-C2HC | pfam01530 | Zinc finger, C2HC type; This is a DNA binding zinc finger domain. |
505-531 | 5.12e-14 | |||||
Zinc finger, C2HC type; This is a DNA binding zinc finger domain. Pssm-ID: 460240 Cd Length: 29 Bit Score: 66.79 E-value: 5.12e-14
|
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Mplasa_alph_rch | TIGR04523 | helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1081-1161 | 4.11e-03 | |||||
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown. Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 41.54 E-value: 4.11e-03
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COG4372 | COG4372 | Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1067-1149 | 6.33e-03 | |||||
Uncharacterized protein, contains DUF3084 domain [Function unknown]; Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.27 E-value: 6.33e-03
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COG4372 | COG4372 | Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1081-1150 | 7.59e-03 | |||||
Uncharacterized protein, contains DUF3084 domain [Function unknown]; Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.27 E-value: 7.59e-03
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Blast search parameters | ||||
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