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Conserved domains on  [gi|767966126|ref|XP_011518505|]
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GDP-fucose transporter 1 isoform X2 [Homo sapiens]

Protein Classification

triose-phosphate transporter family protein( domain architecture ID 706146)

triose-phosphate transporter family protein belongs to the RhaT/DMT (drug/metabolite transporter) superfamily

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
TPT super family cl26744
Triose-phosphate Transporter family; This family includes transporters with a specificity for ...
39-179 7.41e-08

Triose-phosphate Transporter family; This family includes transporters with a specificity for triose phosphate.


The actual alignment was detected with superfamily member pfam03151:

Pssm-ID: 474852 [Multi-domain]  Cd Length: 290  Bit Score: 51.14  E-value: 7.41e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767966126   39 LQIALVVSLYWVTSISMVFLNKYLLDSpslrLDTPIFVTFYQCLVTTLLCKGLSALaaccpGAVDFPslRLDLRVARSVL 118
Cdd:pfam03151   1 LKLGLLFGLWYFLNIYFNIYNKKILNA----FPYPMTVSSVQLFVGSVYILVLWGT-----GLRKRP--KISSPFLKNIL 69
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767966126  119 PLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIG 179
Cdd:pfam03151  70 PLALCHTLGHVLANVSLGKVAVSFTHTVKAMEPFFTVILSRLFLGEYPPLLVYLSLLPIVG 130
 
Name Accession Description Interval E-value
TPT pfam03151
Triose-phosphate Transporter family; This family includes transporters with a specificity for ...
39-179 7.41e-08

Triose-phosphate Transporter family; This family includes transporters with a specificity for triose phosphate.


Pssm-ID: 308657 [Multi-domain]  Cd Length: 290  Bit Score: 51.14  E-value: 7.41e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767966126   39 LQIALVVSLYWVTSISMVFLNKYLLDSpslrLDTPIFVTFYQCLVTTLLCKGLSALaaccpGAVDFPslRLDLRVARSVL 118
Cdd:pfam03151   1 LKLGLLFGLWYFLNIYFNIYNKKILNA----FPYPMTVSSVQLFVGSVYILVLWGT-----GLRKRP--KISSPFLKNIL 69
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767966126  119 PLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIG 179
Cdd:pfam03151  70 PLALCHTLGHVLANVSLGKVAVSFTHTVKAMEPFFTVILSRLFLGEYPPLLVYLSLLPIVG 130
 
Name Accession Description Interval E-value
TPT pfam03151
Triose-phosphate Transporter family; This family includes transporters with a specificity for ...
39-179 7.41e-08

Triose-phosphate Transporter family; This family includes transporters with a specificity for triose phosphate.


Pssm-ID: 308657 [Multi-domain]  Cd Length: 290  Bit Score: 51.14  E-value: 7.41e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767966126   39 LQIALVVSLYWVTSISMVFLNKYLLDSpslrLDTPIFVTFYQCLVTTLLCKGLSALaaccpGAVDFPslRLDLRVARSVL 118
Cdd:pfam03151   1 LKLGLLFGLWYFLNIYFNIYNKKILNA----FPYPMTVSSVQLFVGSVYILVLWGT-----GLRKRP--KISSPFLKNIL 69
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767966126  119 PLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIG 179
Cdd:pfam03151  70 PLALCHTLGHVLANVSLGKVAVSFTHTVKAMEPFFTVILSRLFLGEYPPLLVYLSLLPIVG 130
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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