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Conserved domains on  [gi|767983330|ref|XP_011519542|]
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telomere repeats-binding bouquet formation protein 2 isoform X1 [Homo sapiens]

Protein Classification

TERB2 domain-containing protein( domain architecture ID 10633432)

TERB2 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TERB2 pfam15101
Telomere-associated protein TERB2; TERB2 is a meiosis-specific telomere-associated protein ...
 2-116 1.50e-78

Telomere-associated protein TERB2; TERB2 is a meiosis-specific telomere-associated protein involved in meiotic telomere attachment to the nucleus inner membrane, a crucial step for homologous pairing and synapsis.


:

Pssm-ID: 464503  Cd Length: 207  Bit Score: 230.42  E-value: 1.50e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767983330    2 FQGQRGWFCGSVSQDLRQFWVAEGGTISDPRAADFLFSCDASHPDTLRIYQSLDYIEDNATVFHAYYLSAVANAKIKNSV 81
Cdd:pfam15101   1 FKGQTAWFSTSVSKDLRELWVKEGGVIVDWDDADFLFSDDASHPDTARIYESLDYLEDRATVFHSSYLSAAANAASKASV 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 767983330   82 ALGHFILPPACLQKEIRRKIGSFIWEQDQHFLIEK 116
Cdd:pfam15101  81 ALGHYVLPPPCLQEEIRRKIGRFIWEQDNQSQVEQ 115
 
Name Accession Description Interval E-value
TERB2 pfam15101
Telomere-associated protein TERB2; TERB2 is a meiosis-specific telomere-associated protein ...
 2-116 1.50e-78

Telomere-associated protein TERB2; TERB2 is a meiosis-specific telomere-associated protein involved in meiotic telomere attachment to the nucleus inner membrane, a crucial step for homologous pairing and synapsis.


Pssm-ID: 464503  Cd Length: 207  Bit Score: 230.42  E-value: 1.50e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767983330    2 FQGQRGWFCGSVSQDLRQFWVAEGGTISDPRAADFLFSCDASHPDTLRIYQSLDYIEDNATVFHAYYLSAVANAKIKNSV 81
Cdd:pfam15101   1 FKGQTAWFSTSVSKDLRELWVKEGGVIVDWDDADFLFSDDASHPDTARIYESLDYLEDRATVFHSSYLSAAANAASKASV 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 767983330   82 ALGHFILPPACLQKEIRRKIGSFIWEQDQHFLIEK 116
Cdd:pfam15101  81 ALGHYVLPPPCLQEEIRRKIGRFIWEQDNQSQVEQ 115
 
Name Accession Description Interval E-value
TERB2 pfam15101
Telomere-associated protein TERB2; TERB2 is a meiosis-specific telomere-associated protein ...
 2-116 1.50e-78

Telomere-associated protein TERB2; TERB2 is a meiosis-specific telomere-associated protein involved in meiotic telomere attachment to the nucleus inner membrane, a crucial step for homologous pairing and synapsis.


Pssm-ID: 464503  Cd Length: 207  Bit Score: 230.42  E-value: 1.50e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767983330    2 FQGQRGWFCGSVSQDLRQFWVAEGGTISDPRAADFLFSCDASHPDTLRIYQSLDYIEDNATVFHAYYLSAVANAKIKNSV 81
Cdd:pfam15101   1 FKGQTAWFSTSVSKDLRELWVKEGGVIVDWDDADFLFSDDASHPDTARIYESLDYLEDRATVFHSSYLSAAANAASKASV 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 767983330   82 ALGHFILPPACLQKEIRRKIGSFIWEQDQHFLIEK 116
Cdd:pfam15101  81 ALGHYVLPPPCLQEEIRRKIGRFIWEQDNQSQVEQ 115
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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