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Conserved domains on  [gi|767986902|ref|XP_011520672|]
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coiled-coil domain-containing protein 78 isoform X20 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4472 super family cl20666
Domain of unknown function (DUF4472); This family is specific to the Chordates. Some members ...
 56-90 1.21e-13

Domain of unknown function (DUF4472); This family is specific to the Chordates. Some members also carry Kinesin-motor domains at their N-terminus, Kinesin, pfam00225.


The actual alignment was detected with superfamily member pfam14739:

Pssm-ID: 464291 [Multi-domain]  Cd Length: 107  Bit Score: 66.94  E-value: 1.21e-13
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 767986902   56 EQQLQISKELVDIQITTHHLHEQHEAEIFQLKSEV 90
Cdd:pfam14739   3 EEKLQISKALVDLQIENNKLREQYEAEKFELKNKL 37
 
Name Accession Description Interval E-value
DUF4472 pfam14739
Domain of unknown function (DUF4472); This family is specific to the Chordates. Some members ...
 56-90 1.21e-13

Domain of unknown function (DUF4472); This family is specific to the Chordates. Some members also carry Kinesin-motor domains at their N-terminus, Kinesin, pfam00225.


Pssm-ID: 464291 [Multi-domain]  Cd Length: 107  Bit Score: 66.94  E-value: 1.21e-13
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 767986902   56 EQQLQISKELVDIQITTHHLHEQHEAEIFQLKSEV 90
Cdd:pfam14739   3 EEKLQISKALVDLQIENNKLREQYEAEKFELKNKL 37
 
Name Accession Description Interval E-value
DUF4472 pfam14739
Domain of unknown function (DUF4472); This family is specific to the Chordates. Some members ...
 56-90 1.21e-13

Domain of unknown function (DUF4472); This family is specific to the Chordates. Some members also carry Kinesin-motor domains at their N-terminus, Kinesin, pfam00225.


Pssm-ID: 464291 [Multi-domain]  Cd Length: 107  Bit Score: 66.94  E-value: 1.21e-13
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 767986902   56 EQQLQISKELVDIQITTHHLHEQHEAEIFQLKSEV 90
Cdd:pfam14739   3 EEKLQISKALVDLQIENNKLREQYEAEKFELKNKL 37
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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